/home/cermak/venv/esmg/bin/doxygen Doxyfile_nortd_latex warning: ignoring unsupported tag `OUTPUT_TEXT_DIRECTION =' at line 102, file Doxyfile_nortd_latex warning: ignoring unsupported tag `JAVADOC_BANNER =' at line 198, file Doxyfile_nortd_latex warning: ignoring unsupported tag `OPTIMIZE_OUTPUT_SLICE =' at line 322, file Doxyfile_nortd_latex warning: ignoring unsupported tag `NUM_PROC_THREADS =' at line 485, file Doxyfile_nortd_latex warning: ignoring unsupported tag `EXTRACT_PRIV_VIRTUAL =' at line 511, file Doxyfile_nortd_latex warning: ignoring unsupported tag `HTML_DYNAMIC_MENUS =' at line 1318, file Doxyfile_nortd_latex warning: ignoring unsupported tag `HTML_FORMULA_FORMAT =' at line 1590, file Doxyfile_nortd_latex warning: ignoring unsupported tag `FORMULA_MACROFILE =' at line 1616, file Doxyfile_nortd_latex warning: ignoring unsupported tag `LATEX_MAKEINDEX_CMD =' at line 1800, file Doxyfile_nortd_latex warning: ignoring unsupported tag `LATEX_EMOJI_DIRECTORY =' at line 1952, file Doxyfile_nortd_latex warning: ignoring unsupported tag `XML_NS_MEMB_FILE_SCOPE =' at line 2096, file Doxyfile_nortd_latex Parsing layout file layout.xml... Searching for include files... Searching for files in directory /home/cermak/src/MOM6.devrob/src/framework Searching for files in directory /home/cermak/src/MOM6.devrob/config_src/dynamic_symmetric Searching for example files... Searching for files in directory /home/cermak/src/MOM6.devrob/src Searching for files in directory /home/cermak/src/MOM6.devrob/src/ALE Searching for files in directory /home/cermak/src/MOM6.devrob/src/core Searching for files in directory /home/cermak/src/MOM6.devrob/src/diagnostics Searching for files in directory /home/cermak/src/MOM6.devrob/src/equation_of_state Searching for files in directory /home/cermak/src/MOM6.devrob/src/equation_of_state/TEOS10 Searching for files in directory /home/cermak/src/MOM6.devrob/src/framework Searching for files in directory /home/cermak/src/MOM6.devrob/src/ice_shelf Searching for files in directory /home/cermak/src/MOM6.devrob/src/initialization Searching for files in directory /home/cermak/src/MOM6.devrob/src/ocean_data_assim Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations/lateral Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations/vertical Searching for files in directory /home/cermak/src/MOM6.devrob/src/tracer Searching for files in directory /home/cermak/src/MOM6.devrob/src/user Searching for images... Searching for files in directory /home/cermak/src/MOM6.devrob/docs/images Searching for files in directory /home/cermak/src/MOM6.devrob/src Searching for files in directory /home/cermak/src/MOM6.devrob/src/ALE Searching for files in directory /home/cermak/src/MOM6.devrob/src/core Searching for files in directory /home/cermak/src/MOM6.devrob/src/diagnostics Searching for files in directory /home/cermak/src/MOM6.devrob/src/equation_of_state Searching for files in directory /home/cermak/src/MOM6.devrob/src/equation_of_state/TEOS10 Searching for files in directory /home/cermak/src/MOM6.devrob/src/framework Searching for files in directory /home/cermak/src/MOM6.devrob/src/ice_shelf Searching for files in directory /home/cermak/src/MOM6.devrob/src/initialization Searching for files in directory /home/cermak/src/MOM6.devrob/src/ocean_data_assim Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations/lateral Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations/vertical Searching for files in directory /home/cermak/src/MOM6.devrob/src/tracer Searching for files in directory /home/cermak/src/MOM6.devrob/src/user Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching for files in directory /home/cermak/src/MOM6.devrob/src/equation_of_state/TEOS10 Searching INPUT for files to process... Searching for files in directory /home/cermak/src/MOM6.devrob/src Searching for files in directory /home/cermak/src/MOM6.devrob/src/ALE Searching for files in directory /home/cermak/src/MOM6.devrob/src/core Searching for files in directory /home/cermak/src/MOM6.devrob/src/diagnostics Searching for files in directory /home/cermak/src/MOM6.devrob/src/equation_of_state Searching for files in directory /home/cermak/src/MOM6.devrob/src/equation_of_state/TEOS10 Searching for files in directory /home/cermak/src/MOM6.devrob/src/framework Searching for files in directory /home/cermak/src/MOM6.devrob/src/ice_shelf Searching for files in directory /home/cermak/src/MOM6.devrob/src/initialization Searching for files in directory /home/cermak/src/MOM6.devrob/src/ocean_data_assim Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations/lateral Searching for files in directory /home/cermak/src/MOM6.devrob/src/parameterizations/vertical Searching for files in directory /home/cermak/src/MOM6.devrob/src/tracer Searching for files in directory /home/cermak/src/MOM6.devrob/src/user Searching for files in directory /home/cermak/src/MOM6.devrob/config_src/solo_driver Searching for files in directory /home/cermak/src/MOM6.devrob/config_src/dynamic_symmetric Searching for files in directory /home/cermak/src/MOM6.devrob/config_src/external Searching for files in directory /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC Searching for files in directory /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks Searching for files in directory /home/cermak/src/MOM6.devrob/config_src/coupled_driver Reading and parsing tag files Parsing files Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/_ALE.dox... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/_ALE.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/_ALE_timestep.dox... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/_ALE_timestep.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/coord_adapt.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/coord_adapt.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/coord_hycom.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/coord_hycom.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/coord_rho.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/coord_rho.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/coord_sigma.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/coord_sigma.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/coord_slight.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/coord_slight.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/coord_zlike.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/coord_zlike.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/MOM_ALE.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/MOM_ALE.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/MOM_regridding.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/MOM_regridding.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/MOM_remapping.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/MOM_remapping.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/P1M_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/P1M_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/P3M_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/P3M_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/PCM_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/PCM_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/PLM_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/PLM_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/polynomial_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/polynomial_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/PPM_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/PPM_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/PQM_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/PQM_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/regrid_consts.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/regrid_consts.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/regrid_edge_values.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/regrid_edge_values.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/regrid_interp.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/regrid_interp.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ALE/regrid_solvers.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ALE/regrid_solvers.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Baroclinic_Momentum.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Baroclinic_Momentum.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Barotropic_Baroclinic_Coupling.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Barotropic_Baroclinic_Coupling.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Barotropic_Momentum.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Barotropic_Momentum.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Discrete_Coriolis.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Discrete_Coriolis.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Discrete_grids.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Discrete_grids.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Discrete_OBC.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Discrete_OBC.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Discrete_PG.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Discrete_PG.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Energetic_consistancy.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Energetic_consistancy.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Finite_difference.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Finite_difference.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_General_coordinate.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_General_coordinate.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Governing.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Governing.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Notation.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Notation.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_PPM.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_PPM.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Sea_ice.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Sea_ice.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Solar_radiation.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Solar_radiation.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Specifics.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Specifics.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/_Timestep_Overview.dox... Parsing file /home/cermak/src/MOM6.devrob/src/core/_Timestep_Overview.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_barotropic.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_barotropic.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_boundary_update.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_boundary_update.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_checksum_packages.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_checksum_packages.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_continuity.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_continuity.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_continuity_PPM.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_continuity_PPM.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_CoriolisAdv.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_CoriolisAdv.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_density_integrals.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_density_integrals.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_split_RK2.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_split_RK2.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_unsplit.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_unsplit.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_unsplit_RK2.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_unsplit_RK2.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_forcing_type.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_forcing_type.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_grid.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_grid.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_interface_heights.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_interface_heights.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_isopycnal_slopes.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_isopycnal_slopes.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_open_boundary.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_open_boundary.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce_FV.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce_FV.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce_Montgomery.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce_Montgomery.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_transcribe_grid.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_transcribe_grid.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_unit_tests.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_unit_tests.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_variables.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_variables.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/core/MOM_verticalGrid.F90... Parsing file /home/cermak/src/MOM6.devrob/src/core/MOM_verticalGrid.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_debugging.F90... Parsing file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_debugging.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_diagnostics.F90... Parsing file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_diagnostics.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_obsolete_diagnostics.F90... Parsing file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_obsolete_diagnostics.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_obsolete_params.F90... Parsing file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_obsolete_params.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_PointAccel.F90... Parsing file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_PointAccel.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_sum_output.F90... Parsing file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_sum_output.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_wave_speed.F90... Parsing file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_wave_speed.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_wave_structure.F90... Parsing file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_wave_structure.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/equation_of_state/_Equation_of_State.dox... Parsing file /home/cermak/src/MOM6.devrob/src/equation_of_state/_Equation_of_State.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS.F90... Parsing file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_linear.F90... Parsing file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_linear.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_NEMO.F90... Parsing file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_NEMO.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_TEOS10.F90... Parsing file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_TEOS10.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_UNESCO.F90... Parsing file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_UNESCO.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_Wright.F90... Parsing file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_Wright.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_TFreeze.F90... Parsing file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_TFreeze.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Diagnostics.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Diagnostics.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Domain_decomposition.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Domain_decomposition.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Global_grids.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Global_grids.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Horizontal_indexing.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Horizontal_indexing.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Parallel_IO.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Parallel_IO.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Regional_grids.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Regional_grids.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Runtime_parameter_system.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Runtime_parameter_system.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Testing.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Testing.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/_Vertical_grids.dox... Parsing file /home/cermak/src/MOM6.devrob/src/framework/_Vertical_grids.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_array_transform.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_array_transform.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_checksums.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_checksums.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_coms.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_coms.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_constants.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_constants.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_cpu_clock.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_cpu_clock.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_manager_wrapper.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_manager_wrapper.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_mediator.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_mediator.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_remap.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_remap.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_vkernels.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_vkernels.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_document.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_document.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_domains.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_domains.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_dyn_horgrid.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_dyn_horgrid.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_error_handler.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_error_handler.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_file_parser.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_file_parser.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_get_input.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_get_input.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_hor_index.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_hor_index.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_horizontal_regridding.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_horizontal_regridding.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_intrinsic_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_intrinsic_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_io.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_io.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_memory_macros.h... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_memory_macros.h... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_random.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_random.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_restart.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_restart.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_safe_alloc.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_safe_alloc.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_spatial_means.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_spatial_means.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_string_functions.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_string_functions.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_time_manager.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_time_manager.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_transform_FMS.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_transform_FMS.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_unit_scaling.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_unit_scaling.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/MOM_write_cputime.F90... Parsing file /home/cermak/src/MOM6.devrob/src/framework/MOM_write_cputime.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/framework/version_variable.h... Parsing file /home/cermak/src/MOM6.devrob/src/framework/version_variable.h... Preprocessing /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_dynamics.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_dynamics.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_initialize.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_initialize.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_state.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_state.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_marine_ice.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_marine_ice.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ice_shelf/user_shelf_init.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ice_shelf/user_shelf_init.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/initialization/MOM_coord_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/initialization/MOM_coord_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/initialization/MOM_fixed_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/initialization/MOM_fixed_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/initialization/MOM_grid_initialize.F90... Parsing file /home/cermak/src/MOM6.devrob/src/initialization/MOM_grid_initialize.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/initialization/MOM_shared_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/initialization/MOM_shared_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/initialization/MOM_state_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/initialization/MOM_state_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/initialization/MOM_tracer_initialization_from_Z.F90... Parsing file /home/cermak/src/MOM6.devrob/src/initialization/MOM_tracer_initialization_from_Z.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/ocean_data_assim/MOM_oda_driver.F90... Parsing file /home/cermak/src/MOM6.devrob/src/ocean_data_assim/MOM_oda_driver.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_hor_visc.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_hor_visc.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_internal_tides.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_internal_tides.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_lateral_mixing_coeffs.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_lateral_mixing_coeffs.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_MEKE.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_MEKE.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_MEKE_types.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_MEKE_types.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_mixed_layer_restrat.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_mixed_layer_restrat.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_thickness_diffuse.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_thickness_diffuse.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_tidal_forcing.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_tidal_forcing.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/_CVMix_KPP.dox... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/_CVMix_KPP.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_ALE_sponge.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_ALE_sponge.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_bkgnd_mixing.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_bkgnd_mixing.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_bulk_mixed_layer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_bulk_mixed_layer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_conv.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_conv.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_ddiff.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_ddiff.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_KPP.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_KPP.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_shear.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_shear.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diabatic_aux.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diabatic_aux.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diabatic_driver.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diabatic_driver.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diapyc_energy_req.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diapyc_energy_req.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_energetic_PBL.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_energetic_PBL.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_entrain_diffusive.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_entrain_diffusive.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_full_convection.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_full_convection.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_geothermal.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_geothermal.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_internal_tide_input.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_internal_tide_input.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_kappa_shear.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_kappa_shear.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_opacity.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_opacity.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_regularize_layers.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_regularize_layers.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_set_diffusivity.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_set_diffusivity.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_set_viscosity.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_set_viscosity.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_sponge.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_sponge.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_tidal_mixing.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_tidal_mixing.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_vert_friction.F90... Parsing file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_vert_friction.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/_Advection.dox... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/_Advection.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/_Discrete_tracer.dox... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/_Discrete_tracer.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/_Horizontal_diffusion.dox... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/_Horizontal_diffusion.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/_Passive_tracer.dox... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/_Passive_tracer.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_fluxes.dox... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_fluxes.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_timestep.dox... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_timestep.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_Transport.dox... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_Transport.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/_Vertical_diffusion.dox... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/_Vertical_diffusion.dox... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/advection_test_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/advection_test_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/boundary_impulse_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/boundary_impulse_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/DOME_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/DOME_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/dye_example.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/dye_example.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/dyed_obc_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/dyed_obc_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/ideal_age_example.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/ideal_age_example.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/ISOMIP_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/ISOMIP_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_generic_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_generic_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_lateral_boundary_diffusion.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_lateral_boundary_diffusion.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_neutral_diffusion.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_neutral_diffusion.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_OCMIP2_CFC.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_OCMIP2_CFC.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_offline_aux.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_offline_aux.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_offline_main.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_offline_main.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_advect.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_advect.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_diabatic.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_diabatic.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_flow_control.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_flow_control.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_hor_diff.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_hor_diff.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_registry.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_registry.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_Z_init.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_Z_init.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/oil_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/oil_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/pseudo_salt_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/pseudo_salt_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/RGC_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/RGC_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/tracer/tracer_example.F90... Parsing file /home/cermak/src/MOM6.devrob/src/tracer/tracer_example.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/adjustment_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/adjustment_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/baroclinic_zone_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/baroclinic_zone_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/basin_builder.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/basin_builder.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/benchmark_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/benchmark_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/BFB_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/BFB_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/BFB_surface_forcing.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/BFB_surface_forcing.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/circle_obcs_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/circle_obcs_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/dense_water_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/dense_water_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/DOME2d_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/DOME2d_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/DOME_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/DOME_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/dumbbell_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/dumbbell_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/dumbbell_surface_forcing.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/dumbbell_surface_forcing.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/dyed_channel_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/dyed_channel_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/dyed_obcs_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/dyed_obcs_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/external_gwave_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/external_gwave_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/Idealized_Hurricane.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/Idealized_Hurricane.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/ISOMIP_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/ISOMIP_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/Kelvin_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/Kelvin_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/lock_exchange_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/lock_exchange_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/MOM_controlled_forcing.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/MOM_controlled_forcing.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/MOM_wave_interface.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/MOM_wave_interface.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/Neverworld_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/Neverworld_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/Phillips_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/Phillips_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/RGC_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/RGC_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/Rossby_front_2d_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/Rossby_front_2d_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/SCM_CVMix_tests.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/SCM_CVMix_tests.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/seamount_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/seamount_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/shelfwave_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/shelfwave_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/sloshing_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/sloshing_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/soliton_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/soliton_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/supercritical_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/supercritical_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/tidal_bay_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/tidal_bay_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/user_change_diffusivity.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/user_change_diffusivity.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/user_initialization.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/user_initialization.F90... Preprocessing /home/cermak/src/MOM6.devrob/src/user/user_revise_forcing.F90... Parsing file /home/cermak/src/MOM6.devrob/src/user/user_revise_forcing.F90... Reading /home/cermak/src/MOM6.devrob/docs/front_page.md... Preprocessing /home/cermak/src/MOM6.devrob/config_src/solo_driver/atmos_ocean_fluxes.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/solo_driver/atmos_ocean_fluxes.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/solo_driver/MESO_surface_forcing.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/solo_driver/MESO_surface_forcing.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/solo_driver/MOM_driver.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/solo_driver/MOM_driver.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/solo_driver/MOM_surface_forcing.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/solo_driver/MOM_surface_forcing.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/solo_driver/user_surface_forcing.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/solo_driver/user_surface_forcing.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/dynamic_symmetric/MOM_memory.h... Parsing file /home/cermak/src/MOM6.devrob/config_src/dynamic_symmetric/MOM_memory.h... Preprocessing /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/FMS_coupler_util.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/FMS_coupler_util.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/generic_tracer.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/generic_tracer.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/generic_tracer_utils.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/generic_tracer_utils.F90... Reading /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/README.md... Reading /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/kdtree.f90... Parsing file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/kdtree.f90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/ocean_da_core.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/ocean_da_core.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/ocean_da_types.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/ocean_da_types.F90... Reading /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/README.md... Preprocessing /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/write_ocean_obs.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/write_ocean_obs.F90... Reading /home/cermak/src/MOM6.devrob/config_src/external/README.md... Preprocessing /home/cermak/src/MOM6.devrob/config_src/coupled_driver/MOM_surface_forcing_gfdl.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/coupled_driver/MOM_surface_forcing_gfdl.F90... Preprocessing /home/cermak/src/MOM6.devrob/config_src/coupled_driver/ocean_model_MOM.F90... Parsing file /home/cermak/src/MOM6.devrob/config_src/coupled_driver/ocean_model_MOM.F90... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Associating documentation with classes... Computing nesting relations for classes... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Freeing entry tree Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Distributing member group documentation. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Computing dependencies between directories... Generating citations page... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /home/cermak/src/MOM6.devrob/config_src/coupled_driver/MOM_surface_forcing_gfdl.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/coupled_driver/ocean_model_MOM.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/dynamic_symmetric/MOM_memory.h... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/FMS_coupler_util.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/generic_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/generic_tracer_utils.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/GFDL_ocean_BGC/README.md... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/README.md... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/README.md... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/kdtree.f90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/ocean_da_core.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/ocean_da_types.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/external/ODA_hooks/write_ocean_obs.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/solo_driver/atmos_ocean_fluxes.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/solo_driver/MESO_surface_forcing.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/solo_driver/MOM_driver.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/solo_driver/MOM_surface_forcing.F90... Generating code for file /home/cermak/src/MOM6.devrob/config_src/solo_driver/user_surface_forcing.F90... Generating code for file front_page.md... Parsing code for file /home/cermak/src/MOM6.devrob/src/ALE/_ALE.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/ALE/_ALE_timestep.dox... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/coord_adapt.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/coord_hycom.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/coord_rho.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/coord_sigma.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/coord_slight.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/coord_zlike.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/MOM_ALE.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/MOM_regridding.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/MOM_remapping.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/P1M_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/P3M_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/PCM_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/PLM_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/polynomial_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/PPM_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/PQM_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/regrid_consts.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/regrid_edge_values.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/regrid_interp.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ALE/regrid_solvers.F90... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Baroclinic_Momentum.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Barotropic_Baroclinic_Coupling.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Barotropic_Momentum.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Discrete_Coriolis.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Discrete_grids.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Discrete_OBC.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Discrete_PG.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Energetic_consistancy.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Finite_difference.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_General_coordinate.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Governing.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Notation.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_PPM.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Sea_ice.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Solar_radiation.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Specifics.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/core/_Timestep_Overview.dox... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_barotropic.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_boundary_update.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_checksum_packages.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_continuity.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_continuity_PPM.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_CoriolisAdv.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_density_integrals.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_split_RK2.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_unsplit.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_dynamics_unsplit_RK2.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_forcing_type.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_grid.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_interface_heights.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_isopycnal_slopes.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_open_boundary.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce_FV.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_PressureForce_Montgomery.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_transcribe_grid.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_unit_tests.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_variables.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/core/MOM_verticalGrid.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_debugging.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_diagnostics.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_obsolete_diagnostics.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_obsolete_params.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_PointAccel.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_sum_output.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_wave_speed.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/diagnostics/MOM_wave_structure.F90... Parsing code for file /home/cermak/src/MOM6.devrob/src/equation_of_state/_Equation_of_State.dox... Generating code for file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_linear.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_NEMO.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_TEOS10.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_UNESCO.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_EOS_Wright.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/equation_of_state/MOM_TFreeze.F90... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Diagnostics.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Domain_decomposition.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Global_grids.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Horizontal_indexing.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Parallel_IO.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Regional_grids.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Runtime_parameter_system.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Testing.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/framework/_Vertical_grids.dox... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_array_transform.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_checksums.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_coms.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_constants.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_cpu_clock.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_manager_wrapper.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_mediator.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_remap.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_diag_vkernels.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_document.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_domains.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_dyn_horgrid.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_error_handler.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_file_parser.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_get_input.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_hor_index.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_horizontal_regridding.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_intrinsic_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_io.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_memory_macros.h... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_random.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_restart.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_safe_alloc.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_spatial_means.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_string_functions.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_time_manager.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_transform_FMS.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_unit_scaling.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/MOM_write_cputime.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/framework/version_variable.h... Generating code for file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_dynamics.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_initialize.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_ice_shelf_state.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ice_shelf/MOM_marine_ice.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ice_shelf/user_shelf_init.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/initialization/MOM_coord_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/initialization/MOM_fixed_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/initialization/MOM_grid_initialize.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/initialization/MOM_shared_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/initialization/MOM_state_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/initialization/MOM_tracer_initialization_from_Z.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/ocean_data_assim/MOM_oda_driver.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_hor_visc.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_internal_tides.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_lateral_mixing_coeffs.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_MEKE.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_MEKE_types.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_mixed_layer_restrat.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_thickness_diffuse.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/lateral/MOM_tidal_forcing.F90... Parsing code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/_CVMix_KPP.dox... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_ALE_sponge.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_bkgnd_mixing.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_bulk_mixed_layer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_conv.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_ddiff.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_KPP.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_CVMix_shear.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diabatic_aux.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diabatic_driver.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_diapyc_energy_req.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_energetic_PBL.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_entrain_diffusive.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_full_convection.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_geothermal.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_internal_tide_input.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_kappa_shear.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_opacity.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_regularize_layers.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_set_diffusivity.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_set_viscosity.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_sponge.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_tidal_mixing.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/parameterizations/vertical/MOM_vert_friction.F90... Parsing code for file /home/cermak/src/MOM6.devrob/src/tracer/_Advection.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/tracer/_Discrete_tracer.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/tracer/_Horizontal_diffusion.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/tracer/_Passive_tracer.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_fluxes.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_timestep.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/tracer/_Tracer_Transport.dox... Parsing code for file /home/cermak/src/MOM6.devrob/src/tracer/_Vertical_diffusion.dox... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/advection_test_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/boundary_impulse_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/DOME_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/dye_example.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/dyed_obc_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/ideal_age_example.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/ISOMIP_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_generic_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_lateral_boundary_diffusion.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_neutral_diffusion.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_OCMIP2_CFC.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_offline_aux.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_offline_main.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_advect.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_diabatic.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_flow_control.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_hor_diff.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_registry.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/MOM_tracer_Z_init.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/oil_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/pseudo_salt_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/RGC_tracer.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/tracer/tracer_example.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/adjustment_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/baroclinic_zone_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/basin_builder.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/benchmark_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/BFB_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/BFB_surface_forcing.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/circle_obcs_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/dense_water_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/DOME2d_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/DOME_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/dumbbell_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/dumbbell_surface_forcing.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/dyed_channel_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/dyed_obcs_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/external_gwave_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/Idealized_Hurricane.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/ISOMIP_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/Kelvin_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/lock_exchange_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/MOM_controlled_forcing.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/MOM_wave_interface.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/Neverworld_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/Phillips_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/RGC_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/Rossby_front_2d_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/SCM_CVMix_tests.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/seamount_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/shelfwave_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/sloshing_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/soliton_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/supercritical_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/tidal_bay_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/user_change_diffusivity.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/user_initialization.F90... Generating code for file /home/cermak/src/MOM6.devrob/src/user/user_revise_forcing.F90... Generating file documentation... Generating docs for file /home/cermak/src/MOM6.devrob/config_src/dynamic_symmetric/MOM_memory.h... Generating docs for file /home/cermak/src/MOM6.devrob/src/framework/MOM_memory_macros.h... Generating page documentation... Generating docs for page ALE... Generating docs for page ALE_Timestep... Generating docs for page Baroclinic_Momentum_Equations... Generating docs for page Barotropic_Baroclinic_Coupling... Generating docs for page Barotropic_Momentum_Equations... Generating docs for page Discrete_Coriolis... Generating docs for page Discrete_Grids... Generating docs for page Discrete_OBC... Generating docs for page Discrete_PG... Generating docs for page Energetic_Consistency... Generating docs for page Finite_Difference_Operators... Generating docs for page General_Coordinate... Generating docs for page Governing_Equations... Generating docs for page Notation... Generating docs for page PPM... Generating docs for page Sea_Ice... Generating docs for page Solar_Radiation... Generating docs for page Specifics... Generating docs for page Timestep_Overview... Generating docs for page Equation_of_State... Generating docs for page Diagnostics... Generating docs for page Domain_Decomposition... Generating docs for page Global_Grids... Generating docs for page Horizontal_Indexing... Generating docs for page Parallel_IO... Generating docs for page Regional_Grids... Generating docs for page Runtime_Parameter_System... Generating docs for page Testing... Generating docs for page Vertical_Grids... Generating docs for page CVMix_KPP... Generating docs for page Tracer_Advection... Generating docs for page Discrete_Tracer... Generating docs for page Horizontal_Diffusion... Generating docs for page Passive_Tracers... Generating docs for page Tracer_Fluxes... Generating docs for page Tracer_Timestep... Generating docs for page Tracer_Transport_Equations... Generating docs for page Vertical_Diffusion... Generating docs for page md__home_cermak_src_MOM6.devrob_config_src_external_GFDL_ocean_BGC_README... Generating docs for page md__home_cermak_src_MOM6.devrob_config_src_external_ODA_hooks_README... Generating docs for page md__home_cermak_src_MOM6.devrob_config_src_external_README... Generating docs for page todo... Generating docs for page citelist... Generating group documentation... Generating class documentation... Generating namespace index... Generating docs for namespace adjustment_initialization Generating docs for namespace advection_test_tracer Generating docs for compound advection_test_tracer::advection_test_tracer_cs... Generating docs for namespace atmos_ocean_fluxes_mod Generating docs for namespace baroclinic_zone_initialization Generating docs for namespace basin_builder Generating docs for namespace benchmark_initialization Generating docs for namespace bfb_initialization Generating docs for namespace bfb_surface_forcing Generating docs for compound bfb_surface_forcing::bfb_surface_forcing_cs... Generating docs for namespace boundary_impulse_tracer Generating docs for compound boundary_impulse_tracer::boundary_impulse_tracer_cs... Generating docs for namespace circle_obcs_initialization Generating docs for namespace coord_adapt Generating docs for compound coord_adapt::adapt_cs... Generating docs for namespace coord_hycom Generating docs for compound coord_hycom::hycom_cs... Generating docs for namespace coord_rho Generating docs for compound coord_rho::rho_cs... Generating docs for namespace coord_sigma Generating docs for compound coord_sigma::sigma_cs... Generating docs for namespace coord_slight Generating docs for compound coord_slight::slight_cs... Generating docs for namespace coord_zlike Generating docs for compound coord_zlike::zlike_cs... Generating docs for namespace dense_water_initialization Generating docs for namespace dome2d_initialization Generating docs for namespace dome_initialization Generating docs for namespace dome_tracer Generating docs for compound dome_tracer::dome_tracer_cs... Generating docs for namespace dumbbell_initialization Generating docs for namespace dumbbell_surface_forcing Generating docs for compound dumbbell_surface_forcing::dumbbell_surface_forcing_cs... Generating docs for namespace dyed_channel_initialization Generating docs for compound dyed_channel_initialization::dyed_channel_obc_cs... Generating docs for namespace dyed_obc_tracer Generating docs for compound dyed_obc_tracer::dyed_obc_tracer_cs... Generating docs for namespace dyed_obcs_initialization Generating docs for namespace external_gwave_initialization Generating docs for namespace g_tracer_utils Generating docs for compound g_tracer_utils::g_diag_type... Generating docs for compound g_tracer_utils::g_tracer_common... Generating docs for compound g_tracer_utils::g_tracer_get_pointer... Generating docs for compound g_tracer_utils::g_tracer_get_values... Generating docs for compound g_tracer_utils::g_tracer_set_values... Generating docs for compound g_tracer_utils::g_tracer_type... Generating docs for namespace generic_tracer Generating docs for namespace ideal_age_example Generating docs for compound ideal_age_example::ideal_age_tracer_cs... Generating docs for namespace idealized_hurricane Generating docs for compound idealized_hurricane::idealized_hurricane_cs... Generating docs for namespace isomip_initialization Generating docs for namespace isomip_tracer Generating docs for compound isomip_tracer::isomip_tracer_cs... Generating docs for namespace kdtree Generating docs for compound kdtree::kd_root... Generating docs for namespace kelvin_initialization Generating docs for compound kelvin_initialization::kelvin_obc_cs... Generating docs for namespace lock_exchange_initialization Generating docs for namespace meso_surface_forcing Generating docs for compound meso_surface_forcing::meso_surface_forcing_cs... Generating docs for namespace mom Generating docs for compound mom::mom_control_struct... Generating docs for compound mom::mom_diag_ids... Generating docs for namespace mom_ale Generating docs for compound mom_ale::ale_cs... Generating docs for namespace mom_ale_sponge Generating docs for compound mom_ale_sponge::ale_sponge_cs... Generating docs for compound mom_ale_sponge::initialize_ale_sponge... Generating docs for compound mom_ale_sponge::p2d... Generating docs for compound mom_ale_sponge::p3d... Generating docs for compound mom_ale_sponge::set_up_ale_sponge_field... Generating docs for compound mom_ale_sponge::set_up_ale_sponge_vel_field... Generating docs for namespace mom_array_transform Generating docs for compound mom_array_transform::allocate_rotated_array... Generating docs for compound mom_array_transform::rotate_array... Generating docs for compound mom_array_transform::rotate_array_pair... Generating docs for compound mom_array_transform::rotate_vector... Generating docs for namespace mom_barotropic Generating docs for compound mom_barotropic::barotropic_cs... Generating docs for compound mom_barotropic::bt_obc_type... Generating docs for compound mom_barotropic::local_bt_cont_u_type... Generating docs for compound mom_barotropic::local_bt_cont_v_type... Generating docs for compound mom_barotropic::memory_size_type... Generating docs for namespace mom_bkgnd_mixing Generating docs for compound mom_bkgnd_mixing::bkgnd_mixing_cs... Generating docs for namespace mom_boundary_update Generating docs for compound mom_boundary_update::update_obc_cs... Generating docs for namespace mom_bulk_mixed_layer Generating docs for compound mom_bulk_mixed_layer::bulkmixedlayer_cs... Generating docs for namespace mom_checksum_packages Generating docs for compound mom_checksum_packages::mom_state_chksum... Generating docs for compound mom_checksum_packages::stats... Generating docs for namespace mom_checksums Generating docs for compound mom_checksums::bchksum... Generating docs for compound mom_checksums::bchksum_pair... Generating docs for compound mom_checksums::chk_sum_msg... Generating docs for compound mom_checksums::chksum... Generating docs for compound mom_checksums::hchksum... Generating docs for compound mom_checksums::hchksum_pair... Generating docs for compound mom_checksums::is_nan... Generating docs for compound mom_checksums::qchksum... Generating docs for compound mom_checksums::uchksum... Generating docs for compound mom_checksums::uvchksum... Generating docs for compound mom_checksums::vchksum... Generating docs for namespace mom_coms Generating docs for compound mom_coms::assignment(=)... Generating docs for compound mom_coms::efp_sum_across_pes... Generating docs for compound mom_coms::efp_type... Generating docs for compound mom_coms::operator(+)... Generating docs for compound mom_coms::operator(-)... Generating docs for compound mom_coms::reproducing_sum... Generating docs for compound mom_coms::reproducing_sum_efp... Generating docs for namespace mom_constants Generating docs for namespace mom_continuity Generating docs for compound mom_continuity::continuity_cs... Generating docs for namespace mom_continuity_ppm Generating docs for compound mom_continuity_ppm::continuity_ppm_cs... Generating docs for compound mom_continuity_ppm::loop_bounds_type... Generating docs for namespace mom_controlled_forcing Generating docs for compound mom_controlled_forcing::ctrl_forcing_cs... Generating docs for namespace mom_coord_initialization Generating docs for namespace mom_coriolisadv Generating docs for compound mom_coriolisadv::coriolisadv_cs... Generating docs for namespace mom_cpu_clock Generating docs for namespace mom_cvmix_conv Generating docs for compound mom_cvmix_conv::cvmix_conv_cs... Generating docs for namespace mom_cvmix_ddiff Generating docs for compound mom_cvmix_ddiff::cvmix_ddiff_cs... Generating docs for namespace mom_cvmix_kpp Generating docs for compound mom_cvmix_kpp::kpp_cs... Generating docs for namespace mom_cvmix_shear Generating docs for compound mom_cvmix_shear::cvmix_shear_cs... Generating docs for namespace mom_debugging Generating docs for compound mom_debugging::check_redundant... Generating docs for compound mom_debugging::check_redundant_b... Generating docs for compound mom_debugging::check_redundant_c... Generating docs for compound mom_debugging::check_redundant_t... Generating docs for compound mom_debugging::vec_chksum... Generating docs for compound mom_debugging::vec_chksum_a... Generating docs for compound mom_debugging::vec_chksum_b... Generating docs for compound mom_debugging::vec_chksum_c... Generating docs for namespace mom_density_integrals Generating docs for namespace mom_diabatic_aux Generating docs for compound mom_diabatic_aux::diabatic_aux_cs... Generating docs for namespace mom_diabatic_driver Generating docs for compound mom_diabatic_driver::diabatic_cs... Generating docs for namespace mom_diag_manager_wrapper Generating docs for compound mom_diag_manager_wrapper::register_diag_field_fms... Generating docs for namespace mom_diag_mediator Generating docs for compound mom_diag_mediator::axes_grp... Generating docs for compound mom_diag_mediator::diag_ctrl... Generating docs for compound mom_diag_mediator::diag_dsamp... Generating docs for compound mom_diag_mediator::diag_grid_storage... Generating docs for compound mom_diag_mediator::diag_grids_type... Generating docs for compound mom_diag_mediator::diag_type... Generating docs for compound mom_diag_mediator::diagcs_dsamp... Generating docs for compound mom_diag_mediator::downsample_diag_field... Generating docs for compound mom_diag_mediator::downsample_field... Generating docs for compound mom_diag_mediator::downsample_mask... Generating docs for compound mom_diag_mediator::post_data... Generating docs for namespace mom_diag_remap Generating docs for compound mom_diag_remap::diag_remap_ctrl... Generating docs for namespace mom_diag_vkernels Generating docs for namespace mom_diagnostics Generating docs for compound mom_diagnostics::diagnostics_cs... Generating docs for compound mom_diagnostics::surface_diag_ids... Generating docs for compound mom_diagnostics::transport_diag_ids... Generating docs for namespace mom_diapyc_energy_req Generating docs for compound mom_diapyc_energy_req::diapyc_energy_req_cs... Generating docs for namespace mom_document Generating docs for compound mom_document::doc_param... Generating docs for compound mom_document::doc_type... Generating docs for compound mom_document::link_msg... Generating docs for namespace mom_domains Generating docs for compound mom_domains::clone_mom_domain... Generating docs for compound mom_domains::create_group_pass... Generating docs for compound mom_domains::fill_symmetric_edges... Generating docs for compound mom_domains::mom_domain_type... Generating docs for compound mom_domains::pass_var... Generating docs for compound mom_domains::pass_var_complete... Generating docs for compound mom_domains::pass_var_start... Generating docs for compound mom_domains::pass_vector... Generating docs for compound mom_domains::pass_vector_complete... Generating docs for compound mom_domains::pass_vector_start... Generating docs for namespace mom_dyn_horgrid Generating docs for compound mom_dyn_horgrid::dyn_horgrid_type... Generating docs for namespace mom_dynamics_split_rk2 Generating docs for compound mom_dynamics_split_rk2::mom_dyn_split_rk2_cs... Generating docs for namespace mom_dynamics_unsplit Generating docs for compound mom_dynamics_unsplit::mom_dyn_unsplit_cs... Generating docs for namespace mom_dynamics_unsplit_rk2 Generating docs for compound mom_dynamics_unsplit_rk2::mom_dyn_unsplit_rk2_cs... Generating docs for namespace MOM_energetic_PBL Generating docs for namespace mom_energetic_pbl Generating docs for compound mom_energetic_pbl::energetic_pbl_cs... Generating docs for compound mom_energetic_pbl::epbl_column_diags... Generating docs for namespace mom_entrain_diffusive Generating docs for compound mom_entrain_diffusive::entrain_diffusive_cs... Generating docs for namespace mom_eos Generating docs for compound mom_eos::calculate_compress... Generating docs for compound mom_eos::calculate_density... Generating docs for compound mom_eos::calculate_density_derivs... Generating docs for compound mom_eos::calculate_density_second_derivs... Generating docs for compound mom_eos::calculate_spec_vol... Generating docs for compound mom_eos::calculate_specific_vol_derivs... Generating docs for compound mom_eos::calculate_tfreeze... Generating docs for compound mom_eos::eos_type... Generating docs for namespace mom_eos_linear Generating docs for compound mom_eos_linear::calculate_density_derivs_linear... Generating docs for compound mom_eos_linear::calculate_density_linear... Generating docs for compound mom_eos_linear::calculate_density_second_derivs_linear... Generating docs for compound mom_eos_linear::calculate_spec_vol_linear... Generating docs for namespace mom_eos_nemo Generating docs for compound mom_eos_nemo::calculate_density_derivs_nemo... Generating docs for compound mom_eos_nemo::calculate_density_nemo... Generating docs for namespace mom_eos_teos10 Generating docs for compound mom_eos_teos10::calculate_density_derivs_teos10... Generating docs for compound mom_eos_teos10::calculate_density_second_derivs_teos10... Generating docs for compound mom_eos_teos10::calculate_density_teos10... Generating docs for compound mom_eos_teos10::calculate_spec_vol_teos10... Generating docs for namespace mom_eos_unesco Generating docs for compound mom_eos_unesco::calculate_density_unesco... Generating docs for compound mom_eos_unesco::calculate_spec_vol_unesco... Generating docs for namespace mom_eos_wright Generating docs for compound mom_eos_wright::calculate_density_derivs_wright... Generating docs for compound mom_eos_wright::calculate_density_second_derivs_wright... Generating docs for compound mom_eos_wright::calculate_density_wright... Generating docs for compound mom_eos_wright::calculate_spec_vol_wright... Generating docs for namespace mom_error_handler Generating docs for namespace mom_file_parser Generating docs for compound mom_file_parser::file_data_type... Generating docs for compound mom_file_parser::get_param... Generating docs for compound mom_file_parser::link_parameter... Generating docs for compound mom_file_parser::log_param... Generating docs for compound mom_file_parser::log_version... Generating docs for compound mom_file_parser::param_file_type... Generating docs for compound mom_file_parser::parameter_block... Generating docs for compound mom_file_parser::read_param... Generating docs for namespace mom_fixed_initialization Generating docs for namespace mom_forcing_type Generating docs for compound mom_forcing_type::allocate_forcing_type... Generating docs for compound mom_forcing_type::allocate_mech_forcing... Generating docs for compound mom_forcing_type::forcing... Generating docs for compound mom_forcing_type::forcing_diags... Generating docs for compound mom_forcing_type::mech_forcing... Generating docs for namespace mom_full_convection Generating docs for namespace mom_generic_tracer Generating docs for compound mom_generic_tracer::mom_generic_tracer_cs... Generating docs for namespace mom_geothermal Generating docs for compound mom_geothermal::geothermal_cs... Generating docs for namespace mom_get_input Generating docs for compound mom_get_input::directories... Generating docs for namespace mom_grid Generating docs for compound mom_grid::ocean_grid_type... Generating docs for namespace mom_grid_initialize Generating docs for compound mom_grid_initialize::gps... Generating docs for namespace mom_hor_index Generating docs for compound mom_hor_index::assignment(=)... Generating docs for compound mom_hor_index::hor_index_type... Generating docs for namespace mom_hor_visc Generating docs for compound mom_hor_visc::hor_visc_cs... Generating docs for namespace mom_horizontal_regridding Generating docs for compound mom_horizontal_regridding::fill_boundaries... Generating docs for compound mom_horizontal_regridding::horiz_interp_and_extrap_tracer... Generating docs for namespace mom_ice_shelf Generating docs for compound mom_ice_shelf::ice_shelf_cs... Generating docs for namespace mom_ice_shelf_dynamics Generating docs for compound mom_ice_shelf_dynamics::ice_shelf_dyn_cs... Generating docs for compound mom_ice_shelf_dynamics::loop_bounds_type... Generating docs for namespace mom_ice_shelf_initialize Generating docs for namespace mom_ice_shelf_state Generating docs for compound mom_ice_shelf_state::ice_shelf_state... Generating docs for namespace mom_int_tide_input Generating docs for compound mom_int_tide_input::int_tide_input_cs... Generating docs for compound mom_int_tide_input::int_tide_input_type... Generating docs for namespace mom_interface_heights Generating docs for compound mom_interface_heights::find_eta... Generating docs for namespace mom_internal_tides Generating docs for compound mom_internal_tides::int_tide_cs... Generating docs for compound mom_internal_tides::loop_bounds_type... Generating docs for namespace mom_intrinsic_functions Generating docs for namespace mom_io Generating docs for compound mom_io::file_exists... Generating docs for compound mom_io::mom_read_data... Generating docs for compound mom_io::mom_read_vector... Generating docs for compound mom_io::vardesc... Generating docs for namespace mom_isopycnal_slopes Generating docs for namespace mom_kappa_shear Generating docs for compound mom_kappa_shear::kappa_shear_cs... Generating docs for namespace mom_lateral_boundary_diffusion Generating docs for compound mom_lateral_boundary_diffusion::lateral_boundary_diffusion_cs... Generating docs for namespace mom_lateral_mixing_coeffs Generating docs for compound mom_lateral_mixing_coeffs::varmix_cs... Generating docs for namespace mom_marine_ice Generating docs for compound mom_marine_ice::marine_ice_cs... Generating docs for namespace mom_meke Generating docs for compound mom_meke::meke_cs... Generating docs for compound mom_meke_types::meke_type... Generating docs for namespace mom_mixed_layer_restrat Generating docs for compound mom_mixed_layer_restrat::mixedlayer_restrat_cs... Generating docs for namespace mom_neutral_diffusion Generating docs for compound mom_neutral_diffusion::neutral_diffusion_cs... Generating docs for namespace mom_obsolete_diagnostics Generating docs for namespace mom_obsolete_params Generating docs for namespace mom_ocmip2_cfc Generating docs for compound mom_ocmip2_cfc::ocmip2_cfc_cs... Generating docs for namespace MOM_oda_driver_mod Generating docs for namespace mom_oda_driver_mod Generating docs for compound mom_oda_driver_mod::oda_cs... Generating docs for compound mom_oda_driver_mod::ptr_mpp_domain... Generating docs for namespace mom_offline_aux Generating docs for namespace mom_offline_main Generating docs for compound mom_offline_main::offline_transport_cs... Generating docs for namespace mom_opacity Generating docs for compound mom_opacity::opacity_cs... Generating docs for compound mom_opacity::optics_type... Generating docs for namespace mom_open_boundary Generating docs for compound mom_open_boundary::file_obc_cs... Generating docs for compound mom_open_boundary::obc_registry_type... Generating docs for compound mom_open_boundary::obc_segment_data_type... Generating docs for compound mom_open_boundary::obc_segment_tracer_type... Generating docs for compound mom_open_boundary::obc_segment_type... Generating docs for compound mom_open_boundary::obc_struct_type... Generating docs for compound mom_open_boundary::ocean_obc_type... Generating docs for compound mom_open_boundary::segment_tracer_registry_type... Generating docs for namespace mom_pointaccel Generating docs for compound mom_pointaccel::pointaccel_cs... Generating docs for namespace mom_pressureforce Generating docs for compound mom_pressureforce::pressureforce_cs... Generating docs for namespace mom_pressureforce_fv Generating docs for compound mom_pressureforce_fv::pressureforce_fv_cs... Generating docs for namespace mom_pressureforce_mont Generating docs for compound mom_pressureforce_mont::pressureforce_mont_cs... Generating docs for namespace mom_random Generating docs for compound mom_random::prng... Generating docs for namespace mom_regridding Generating docs for compound mom_regridding::regridding_cs... Generating docs for namespace mom_regularize_layers Generating docs for compound mom_regularize_layers::regularize_layers_cs... Generating docs for namespace mom_remapping Generating docs for compound mom_remapping::remapping_cs... Generating docs for namespace mom_restart Generating docs for compound mom_restart::field_restart... Generating docs for compound mom_restart::mom_restart_cs... Generating docs for compound mom_restart::obsolete_restart... Generating docs for compound mom_restart::p0d... Generating docs for compound mom_restart::p1d... Generating docs for compound mom_restart::p2d... Generating docs for compound mom_restart::p3d... Generating docs for compound mom_restart::p4d... Generating docs for compound mom_restart::query_initialized... Generating docs for compound mom_restart::register_restart_field... Generating docs for compound mom_restart::register_restart_pair... Generating docs for namespace mom_safe_alloc Generating docs for compound mom_safe_alloc::safe_alloc_alloc... Generating docs for compound mom_safe_alloc::safe_alloc_ptr... Generating docs for namespace mom_set_diffusivity Generating docs for compound mom_set_diffusivity::diffusivity_diags... Generating docs for compound mom_set_diffusivity::set_diffusivity_cs... Generating docs for namespace mom_set_visc Generating docs for compound mom_set_visc::set_visc_cs... Generating docs for namespace mom_shared_initialization Generating docs for namespace mom_spatial_means Generating docs for namespace mom_sponge Generating docs for compound mom_sponge::p2d... Generating docs for compound mom_sponge::p3d... Generating docs for compound mom_sponge::sponge_cs... Generating docs for namespace mom_state_initialization Generating docs for namespace mom_string_functions Generating docs for namespace mom_sum_output Generating docs for compound mom_sum_output::depth_list... Generating docs for compound mom_sum_output::sum_output_cs... Generating docs for namespace mom_surface_forcing Generating docs for compound mom_surface_forcing::surface_forcing_cs... Generating docs for compound mom_surface_forcing_gfdl::ice_ocean_boundary_type... Generating docs for compound mom_surface_forcing_gfdl::surface_forcing_cs... Generating docs for namespace mom_tfreeze Generating docs for compound mom_tfreeze::calculate_tfreeze_linear... Generating docs for compound mom_tfreeze::calculate_tfreeze_millero... Generating docs for compound mom_tfreeze::calculate_tfreeze_teos10... Generating docs for namespace mom_thickness_diffuse Generating docs for compound mom_thickness_diffuse::thickness_diffuse_cs... Generating docs for namespace mom_tidal_forcing Generating docs for compound mom_tidal_forcing::astro_longitudes... Generating docs for compound mom_tidal_forcing::tidal_forcing_cs... Generating docs for namespace mom_tidal_mixing Generating docs for compound mom_tidal_mixing::tidal_mixing_cs... Generating docs for compound mom_tidal_mixing::tidal_mixing_diags... Generating docs for namespace mom_time_manager Generating docs for namespace mom_tracer_advect Generating docs for compound mom_tracer_advect::tracer_advect_cs... Generating docs for namespace mom_tracer_diabatic Generating docs for namespace MOM_tracer_flow_control Generating docs for namespace mom_tracer_flow_control Generating docs for compound mom_tracer_flow_control::tracer_flow_control_cs... Generating docs for namespace mom_tracer_hor_diff Generating docs for compound mom_tracer_hor_diff::p2d... Generating docs for compound mom_tracer_hor_diff::p2di... Generating docs for compound mom_tracer_hor_diff::tracer_hor_diff_cs... Generating docs for namespace mom_tracer_initialization_from_z Generating docs for namespace mom_tracer_registry Generating docs for compound mom_tracer_registry::tracer_registry_type... Generating docs for compound mom_tracer_registry::tracer_type... Generating docs for namespace mom_tracer_z_init Generating docs for namespace mom_transcribe_grid Generating docs for namespace mom_transform_fms Generating docs for compound mom_transform_fms::rotated_mpp_chksum... Generating docs for compound mom_transform_fms::rotated_time_interp_external... Generating docs for compound mom_transform_fms::rotated_write_field... Generating docs for namespace mom_unit_scaling Generating docs for compound mom_unit_scaling::unit_scale_type... Generating docs for namespace mom_unit_tests Generating docs for namespace mom_variables Generating docs for compound mom_variables::accel_diag_ptrs... Generating docs for compound mom_variables::bt_cont_type... Generating docs for compound mom_variables::cont_diag_ptrs... Generating docs for compound mom_variables::ocean_internal_state... Generating docs for compound mom_variables::p2d... Generating docs for compound mom_variables::p3d... Generating docs for compound mom_variables::surface... Generating docs for compound mom_variables::thermo_var_ptrs... Generating docs for compound mom_variables::vertvisc_type... Generating docs for namespace mom_vert_friction Generating docs for compound mom_vert_friction::vertvisc_cs... Generating docs for namespace mom_verticalgrid Generating docs for compound mom_verticalgrid::verticalgrid_type... Generating docs for namespace mom_wave_interface Generating docs for compound mom_wave_interface::wave_parameters_cs... Generating docs for namespace mom_wave_speed Generating docs for compound mom_wave_speed::wave_speed_cs... Generating docs for namespace mom_wave_structure Generating docs for compound mom_wave_structure::wave_structure_cs... Generating docs for namespace mom_write_cputime Generating docs for compound mom_write_cputime::write_cputime_cs... Generating docs for namespace neverworld_initialization Generating docs for namespace ocean_da_core_mod Generating docs for namespace ocean_da_types_mod Generating docs for compound ocean_da_types_mod::forward_operator_type... Generating docs for compound ocean_da_types_mod::grid_type... Generating docs for compound ocean_da_types_mod::ocean_control_struct... Generating docs for compound ocean_da_types_mod::ocean_profile_type... Generating docs for namespace ocean_model_mod Generating docs for compound ocean_model_mod::ocean_model_data_get... Generating docs for compound ocean_model_mod::ocean_public_type... Generating docs for compound ocean_model_mod::ocean_state_type... Generating docs for namespace oil_tracer Generating docs for compound oil_tracer::oil_tracer_cs... Generating docs for namespace p1m_functions Generating docs for namespace p3m_functions Generating docs for namespace PCM_functions Generating docs for namespace pcm_functions Generating docs for namespace phillips_initialization Generating docs for namespace plm_functions Generating docs for namespace polynomial_functions Generating docs for namespace ppm_functions Generating docs for namespace pqm_functions Generating docs for namespace pseudo_salt_tracer Generating docs for compound pseudo_salt_tracer::pseudo_salt_tracer_cs... Generating docs for namespace regional_dyes Generating docs for compound regional_dyes::dye_tracer_cs... Generating docs for namespace regrid_consts Generating docs for compound regrid_consts::coordinateunits... Generating docs for compound regrid_consts::state_dependent... Generating docs for namespace regrid_edge_values Generating docs for namespace regrid_interp Generating docs for compound regrid_interp::interp_cs_type... Generating docs for namespace regrid_solvers Generating docs for namespace rgc_tracer Generating docs for compound rgc_tracer::rgc_tracer_cs... Generating docs for namespace rossby_front_2d_initialization Generating docs for namespace scm_cvmix_tests Generating docs for compound scm_cvmix_tests::scm_cvmix_tests_cs... Generating docs for namespace seamount_initialization Generating docs for namespace shelfwave_initialization Generating docs for compound shelfwave_initialization::shelfwave_obc_cs... Generating docs for namespace sloshing_initialization Generating docs for namespace soliton_initialization Generating docs for namespace supercritical_initialization Generating docs for namespace tidal_bay_initialization Generating docs for compound tidal_bay_initialization::tidal_bay_obc_cs... Generating docs for namespace tidal_forcing Generating docs for namespace user_change_diffusivity Generating docs for compound user_change_diffusivity::user_change_diff_cs... Generating docs for namespace user_initialization Generating docs for namespace user_revise_forcing Generating docs for compound user_revise_forcing::user_revise_forcing_cs... Generating docs for namespace user_shelf_init Generating docs for compound user_shelf_init::user_ice_shelf_cs... Generating docs for namespace user_surface_forcing Generating docs for compound user_surface_forcing::user_surface_forcing_cs... Generating docs for namespace user_tracer_example Generating docs for compound user_tracer_example::user_tracer_example_cs... Generating docs for namespace write_ocean_obs_mod Generating graph info page... Generating directory documentation... Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/ALE Generating dependency graph for directory /home/cermak/src/MOM6.devrob/config_src Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/core Generating dependency graph for directory /home/cermak/src/MOM6.devrob/config_src/coupled_driver Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/diagnostics Generating dependency graph for directory /home/cermak/src/MOM6.devrob/config_src/dynamic_symmetric Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/equation_of_state Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/framework Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/ice_shelf Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/initialization Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/parameterizations/lateral Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/ocean_data_assim Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/parameterizations Generating dependency graph for directory /home/cermak/src/MOM6.devrob/config_src/solo_driver Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/tracer Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/user Generating dependency graph for directory /home/cermak/src/MOM6.devrob/src/parameterizations/vertical Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running dot... Generating dot graphs using 5 parallel threads... Running dot for graph 1/423 Running dot for graph 2/423 Running dot for graph 3/423 Running dot for graph 4/423 Running dot for graph 5/423 Running dot for graph 6/423 Running dot for graph 7/423 Running dot for graph 8/423 Running dot for graph 9/423 Running dot for graph 10/423 Running dot for graph 11/423 Running dot for graph 12/423 Running dot for graph 13/423 Running dot for graph 14/423 Running dot for graph 15/423 Running dot for graph 16/423 Running dot for graph 17/423 Running dot for graph 18/423 Running dot for graph 19/423 Running dot for graph 20/423 Running dot for graph 21/423 Running dot for graph 22/423 Running dot for graph 23/423 Running dot for graph 24/423 Running dot for graph 25/423 Running dot for graph 26/423 Running dot for graph 27/423 Running dot for graph 28/423 Running dot for graph 29/423 Running dot for graph 30/423 Running dot for graph 31/423 Running dot for graph 32/423 Running dot for graph 33/423 Running dot for graph 34/423 Running dot for graph 35/423 Running dot for graph 36/423 Running dot for graph 37/423 Running dot for graph 38/423 Running dot for graph 39/423 Running dot for graph 40/423 Running dot for graph 41/423 Running dot for graph 42/423 Running dot for graph 43/423 Running dot for graph 44/423 Running dot for graph 45/423 Running dot for graph 46/423 Running dot for graph 47/423 Running dot for graph 48/423 Running dot for graph 49/423 Running dot for graph 50/423 Running dot for graph 51/423 Running dot for graph 52/423 Running dot for graph 53/423 Running dot for graph 54/423 Running dot for graph 55/423 Running dot for graph 56/423 Running dot for graph 57/423 Running dot for graph 58/423 Running dot for graph 59/423 Running dot for graph 60/423 Running dot for graph 61/423 Running dot for graph 62/423 Running dot for graph 63/423 Running dot for graph 64/423 Running dot for graph 65/423 Running dot for graph 66/423 Running dot for graph 67/423 Running dot for graph 68/423 Running dot for graph 69/423 Running dot for graph 70/423 Running dot for graph 71/423 Running dot for graph 72/423 Running dot for graph 73/423 Running dot for graph 74/423 Running dot for graph 75/423 Running dot for graph 76/423 Running dot for graph 77/423 Running dot for graph 78/423 Running dot for graph 79/423 Running dot for graph 80/423 Running dot for graph 81/423 Running dot for graph 82/423 Running dot for graph 83/423 Running dot for graph 84/423 Running dot for graph 85/423 Running dot for graph 86/423 Running dot for graph 87/423 Running dot for graph 88/423 Running dot for graph 89/423 Running dot for graph 90/423 Running dot for graph 91/423 Running dot for graph 92/423 Running dot for graph 93/423 Running dot for graph 94/423 Running dot for graph 95/423 Running dot for graph 96/423 Running dot for graph 97/423 Running dot for graph 98/423 Running dot for graph 99/423 Running dot for graph 100/423 Running dot for graph 101/423 Running dot for graph 102/423 Running dot for graph 103/423 Running dot for graph 104/423 Running dot for graph 105/423 Running dot for graph 106/423 Running dot for graph 107/423 Running dot for graph 108/423 Running dot for graph 109/423 Running dot for graph 110/423 Running dot for graph 111/423 Running dot for graph 112/423 Running dot for graph 113/423 Running dot for graph 114/423 Running dot for graph 115/423 Running dot for graph 116/423 Running dot for graph 117/423 Running dot for graph 118/423 Running dot for graph 119/423 Running dot for graph 120/423 Running dot for graph 121/423 Running dot for graph 122/423 Running dot for graph 123/423 Running dot for graph 124/423 Running dot for graph 125/423 Running dot for graph 126/423 Running dot for graph 127/423 Running dot for graph 128/423 Running dot for graph 129/423 Running dot for graph 130/423 Running dot for graph 131/423 Running dot for graph 132/423 Running dot for graph 133/423 Running dot for graph 134/423 Running dot for graph 135/423 Running dot for graph 136/423 Running dot for graph 137/423 Running dot for graph 138/423 Running dot for graph 139/423 Running dot for graph 140/423 Running dot for graph 141/423 Running dot for graph 142/423 Running dot for graph 143/423 Running dot for graph 144/423 Running dot for graph 145/423 Running dot for graph 146/423 Running dot for graph 147/423 Running dot for graph 148/423 Running dot for graph 149/423 Running dot for graph 150/423 Running dot for graph 151/423 Running dot for graph 152/423 Running dot for graph 153/423 Running dot for graph 154/423 Running dot for graph 155/423 Running dot for graph 156/423 Running dot for graph 157/423 Running dot for graph 158/423 Running dot for graph 159/423 Running dot for graph 160/423 Running dot for graph 161/423 Running dot for graph 162/423 Running dot for graph 163/423 Running dot for graph 164/423 Running dot for graph 165/423 Running dot for graph 166/423 Running dot for graph 167/423 Running dot for graph 168/423 Running dot for graph 169/423 Running dot for graph 170/423 Running dot for graph 171/423 Running dot for graph 172/423 Running dot for graph 173/423 Running dot for graph 174/423 Running dot for graph 175/423 Running dot for graph 176/423 Running dot for graph 177/423 Running dot for graph 178/423 Running dot for graph 179/423 Running dot for graph 180/423 Running dot for graph 181/423 Running dot for graph 182/423 Running dot for graph 183/423 Running dot for graph 184/423 Running dot for graph 185/423 Running dot for graph 186/423 Running dot for graph 187/423 Running dot for graph 188/423 Running dot for graph 189/423 Running dot for graph 190/423 Running dot for graph 191/423 Running dot for graph 192/423 Running dot for graph 193/423 Running dot for graph 194/423 Running dot for graph 195/423 Running dot for graph 196/423 Running dot for graph 197/423 Running dot for graph 198/423 Running dot for graph 199/423 Running dot for graph 200/423 Running dot for graph 201/423 Running dot for graph 202/423 Running dot for graph 203/423 Running dot for graph 204/423 Running dot for graph 205/423 Running dot for graph 206/423 Running dot for graph 207/423 Running dot for graph 208/423 Running dot for graph 209/423 Running dot for graph 210/423 Running dot for graph 211/423 Running dot for graph 212/423 Running dot for graph 213/423 Running dot for graph 214/423 Running dot for graph 215/423 Running dot for graph 216/423 Running dot for graph 217/423 Running dot for graph 218/423 Running dot for graph 219/423 Running dot for graph 220/423 Running dot for graph 221/423 Running dot for graph 222/423 Running dot for graph 223/423 Running dot for graph 224/423 Running dot for graph 225/423 Running dot for graph 226/423 Running dot for graph 227/423 Running dot for graph 228/423 Running dot for graph 229/423 Running dot for graph 230/423 Running dot for graph 231/423 Running dot for graph 232/423 Running dot for graph 233/423 Running dot for graph 234/423 Running dot for graph 235/423 Running dot for graph 236/423 Running dot for graph 237/423 Running dot for graph 238/423 Running dot for graph 239/423 Running dot for graph 240/423 Running dot for graph 241/423 Running dot for graph 242/423 Running dot for graph 243/423 Running dot for graph 244/423 Running dot for graph 245/423 Running dot for graph 246/423 Running dot for graph 247/423 Running dot for graph 248/423 Running dot for graph 249/423 Running dot for graph 250/423 Running dot for graph 251/423 Running dot for graph 252/423 Running dot for graph 253/423 Running dot for graph 254/423 Running dot for graph 255/423 Running dot for graph 256/423 Running dot for graph 257/423 Running dot for graph 258/423 Running dot for graph 259/423 Running dot for graph 260/423 Running dot for graph 261/423 Running dot for graph 262/423 Running dot for graph 263/423 Running dot for graph 264/423 Running dot for graph 265/423 Running dot for graph 266/423 Running dot for graph 267/423 Running dot for graph 268/423 Running dot for graph 269/423 Running dot for graph 270/423 Running dot for graph 271/423 Running dot for graph 272/423 Running dot for graph 273/423 Running dot for graph 274/423 Running dot for graph 275/423 Running dot for graph 276/423 Running dot for graph 277/423 Running dot for graph 278/423 Running dot for graph 279/423 Running dot for graph 280/423 Running dot for graph 281/423 Running dot for graph 282/423 Running dot for graph 283/423 Running dot for graph 284/423 Running dot for graph 285/423 Running dot for graph 286/423 Running dot for graph 287/423 Running dot for graph 288/423 Running dot for graph 289/423 Running dot for graph 290/423 Running dot for graph 291/423 Running dot for graph 292/423 Running dot for graph 293/423 Running dot for graph 294/423 Running dot for graph 295/423 Running dot for graph 296/423 Running dot for graph 297/423 Running dot for graph 298/423 Running dot for graph 299/423 Running dot for graph 300/423 Running dot for graph 301/423 Running dot for graph 302/423 Running dot for graph 303/423 Running dot for graph 304/423 Running dot for graph 305/423 Running dot for graph 306/423 Running dot for graph 307/423 Running dot for graph 308/423 Running dot for graph 309/423 Running dot for graph 310/423 Running dot for graph 311/423 Running dot for graph 312/423 Running dot for graph 313/423 Running dot for graph 314/423 Running dot for graph 315/423 Running dot for graph 316/423 Running dot for graph 317/423 Running dot for graph 318/423 Running dot for graph 319/423 Running dot for graph 320/423 Running dot for graph 321/423 Running dot for graph 322/423 Running dot for graph 323/423 Running dot for graph 324/423 Running dot for graph 325/423 Running dot for graph 326/423 Running dot for graph 327/423 Running dot for graph 328/423 Running dot for graph 329/423 Running dot for graph 330/423 Running dot for graph 331/423 Running dot for graph 332/423 Running dot for graph 333/423 Running dot for graph 334/423 Running dot for graph 335/423 Running dot for graph 336/423 Running dot for graph 337/423 Running dot for graph 338/423 Running dot for graph 339/423 Running dot for graph 340/423 Running dot for graph 341/423 Running dot for graph 342/423 Running dot for graph 343/423 Running dot for graph 344/423 Running dot for graph 345/423 Running dot for graph 346/423 Running dot for graph 347/423 Running dot for graph 348/423 Running dot for graph 349/423 Running dot for graph 350/423 Running dot for graph 351/423 Running dot for graph 352/423 Running dot for graph 353/423 Running dot for graph 354/423 Running dot for graph 355/423 Running dot for graph 356/423 Running dot for graph 357/423 Running dot for graph 358/423 Running dot for graph 359/423 Running dot for graph 360/423 Running dot for graph 361/423 Running dot for graph 362/423 Running dot for graph 363/423 Running dot for graph 364/423 Running dot for graph 365/423 Running dot for graph 366/423 Running dot for graph 367/423 Running dot for graph 368/423 Running dot for graph 369/423 Running dot for graph 370/423 Running dot for graph 371/423 Running dot for graph 372/423 Running dot for graph 373/423 Running dot for graph 374/423 Running dot for graph 375/423 Running dot for graph 376/423 Running dot for graph 377/423 Running dot for graph 378/423 Running dot for graph 379/423 Running dot for graph 380/423 Running dot for graph 381/423 Running dot for graph 382/423 Running dot for graph 383/423 Running dot for graph 384/423 Running dot for graph 385/423 Running dot for graph 386/423 Running dot for graph 387/423 Running dot for graph 388/423 Running dot for graph 389/423 Running dot for graph 390/423 Running dot for graph 391/423 Running dot for graph 392/423 Running dot for graph 393/423 Running dot for graph 394/423 Running dot for graph 395/423 Running dot for graph 396/423 Running dot for graph 397/423 Running dot for graph 398/423 Running dot for graph 399/423 Running dot for graph 400/423 Running dot for graph 401/423 Running dot for graph 402/423 Running dot for graph 403/423 Running dot for graph 404/423 Running dot for graph 405/423 Running dot for graph 406/423 Running dot for graph 407/423 Running dot for graph 408/423 Running dot for graph 409/423 Running dot for graph 410/423 Running dot for graph 411/423 Running dot for graph 412/423 Running dot for graph 413/423 Running dot for graph 414/423 Running dot for graph 415/423 Running dot for graph 416/423 Running dot for graph 417/423 Running dot for graph 418/423 Running dot for graph 419/423 Running dot for graph 420/423 Running dot for graph 421/423 Running dot for graph 422/423 Running dot for graph 423/423 Patching output file 1/634 Patching output file 2/634 Patching output file 3/634 Patching output file 4/634 Patching output file 5/634 Patching output file 6/634 Patching output file 7/634 Patching output file 8/634 Patching output file 9/634 Patching output file 10/634 Patching output file 11/634 Patching output file 12/634 Patching output file 13/634 Patching output file 14/634 Patching output file 15/634 Patching output file 16/634 Patching output file 17/634 Patching output file 18/634 Patching output file 19/634 Patching output file 20/634 Patching output file 21/634 Patching output file 22/634 Patching output file 23/634 Patching output file 24/634 Patching output file 25/634 Patching output file 26/634 Patching output file 27/634 Patching output file 28/634 Patching output file 29/634 Patching output file 30/634 Patching output file 31/634 Patching output file 32/634 Patching output file 33/634 Patching output file 34/634 Patching output file 35/634 Patching output file 36/634 Patching output file 37/634 Patching output file 38/634 Patching output file 39/634 Patching output file 40/634 Patching output file 41/634 Patching output file 42/634 Patching output file 43/634 Patching output file 44/634 Patching output file 45/634 Patching output file 46/634 Patching output file 47/634 Patching output file 48/634 Patching output file 49/634 Patching output file 50/634 Patching output file 51/634 Patching output file 52/634 Patching output file 53/634 Patching output file 54/634 Patching output file 55/634 Patching output file 56/634 Patching output file 57/634 Patching output file 58/634 Patching output file 59/634 Patching output file 60/634 Patching output file 61/634 Patching output file 62/634 Patching output file 63/634 Patching output file 64/634 Patching output file 65/634 Patching output file 66/634 Patching output file 67/634 Patching output file 68/634 Patching output file 69/634 Patching output file 70/634 Patching output file 71/634 Patching output file 72/634 Patching output file 73/634 Patching output file 74/634 Patching output file 75/634 Patching output file 76/634 Patching output file 77/634 Patching output file 78/634 Patching output file 79/634 Patching output file 80/634 Patching output file 81/634 Patching output file 82/634 Patching output file 83/634 Patching output file 84/634 Patching output file 85/634 Patching output file 86/634 Patching output file 87/634 Patching output file 88/634 Patching output file 89/634 Patching output file 90/634 Patching output file 91/634 Patching output file 92/634 Patching output file 93/634 Patching output file 94/634 Patching output file 95/634 Patching output file 96/634 Patching output file 97/634 Patching output file 98/634 Patching output file 99/634 Patching output file 100/634 Patching output file 101/634 Patching output file 102/634 Patching output file 103/634 Patching output file 104/634 Patching output file 105/634 Patching output file 106/634 Patching output file 107/634 Patching output file 108/634 Patching output file 109/634 Patching output file 110/634 Patching output file 111/634 Patching output file 112/634 Patching output file 113/634 Patching output file 114/634 Patching output file 115/634 Patching output file 116/634 Patching output file 117/634 Patching output file 118/634 Patching output file 119/634 Patching output file 120/634 Patching output file 121/634 Patching output file 122/634 Patching output file 123/634 Patching output file 124/634 Patching output file 125/634 Patching output file 126/634 Patching output file 127/634 Patching output file 128/634 Patching output file 129/634 Patching output file 130/634 Patching output file 131/634 Patching output file 132/634 Patching output file 133/634 Patching output file 134/634 Patching output file 135/634 Patching output file 136/634 Patching output file 137/634 Patching output file 138/634 Patching output file 139/634 Patching output file 140/634 Patching output file 141/634 Patching output file 142/634 Patching output file 143/634 Patching output file 144/634 Patching output file 145/634 Patching output file 146/634 Patching output file 147/634 Patching output file 148/634 Patching output file 149/634 Patching output file 150/634 Patching output file 151/634 Patching output file 152/634 Patching output file 153/634 Patching output file 154/634 Patching output file 155/634 Patching output file 156/634 Patching output file 157/634 Patching output file 158/634 Patching output file 159/634 Patching output file 160/634 Patching output file 161/634 Patching output file 162/634 Patching output file 163/634 Patching output file 164/634 Patching output file 165/634 Patching output file 166/634 Patching output file 167/634 Patching output file 168/634 Patching output file 169/634 Patching output file 170/634 Patching output file 171/634 Patching output file 172/634 Patching output file 173/634 Patching output file 174/634 Patching output file 175/634 Patching output file 176/634 Patching output file 177/634 Patching output file 178/634 Patching output file 179/634 Patching output file 180/634 Patching output file 181/634 Patching output file 182/634 Patching output file 183/634 Patching output file 184/634 Patching output file 185/634 Patching output file 186/634 Patching output file 187/634 Patching output file 188/634 Patching output file 189/634 Patching output file 190/634 Patching output file 191/634 Patching output file 192/634 Patching output file 193/634 Patching output file 194/634 Patching output file 195/634 Patching output file 196/634 Patching output file 197/634 Patching output file 198/634 Patching output file 199/634 Patching output file 200/634 Patching output file 201/634 Patching output file 202/634 Patching output file 203/634 Patching output file 204/634 Patching output file 205/634 Patching output file 206/634 Patching output file 207/634 Patching output file 208/634 Patching output file 209/634 Patching output file 210/634 Patching output file 211/634 Patching output file 212/634 Patching output file 213/634 Patching output file 214/634 Patching output file 215/634 Patching output file 216/634 Patching output file 217/634 Patching output file 218/634 Patching output file 219/634 Patching output file 220/634 Patching output file 221/634 Patching output file 222/634 Patching output file 223/634 Patching output file 224/634 Patching output file 225/634 Patching output file 226/634 Patching output file 227/634 Patching output file 228/634 Patching output file 229/634 Patching output file 230/634 Patching output file 231/634 Patching output file 232/634 Patching output file 233/634 Patching output file 234/634 Patching output file 235/634 Patching output file 236/634 Patching output file 237/634 Patching output file 238/634 Patching output file 239/634 Patching output file 240/634 Patching output file 241/634 Patching output file 242/634 Patching output file 243/634 Patching output file 244/634 Patching output file 245/634 Patching output file 246/634 Patching output file 247/634 Patching output file 248/634 Patching output file 249/634 Patching output file 250/634 Patching output file 251/634 Patching output file 252/634 Patching output file 253/634 Patching output file 254/634 Patching output file 255/634 Patching output file 256/634 Patching output file 257/634 Patching output file 258/634 Patching output file 259/634 Patching output file 260/634 Patching output file 261/634 Patching output file 262/634 Patching output file 263/634 Patching output file 264/634 Patching output file 265/634 Patching output file 266/634 Patching output file 267/634 Patching output file 268/634 Patching output file 269/634 Patching output file 270/634 Patching output file 271/634 Patching output file 272/634 Patching output file 273/634 Patching output file 274/634 Patching output file 275/634 Patching output file 276/634 Patching output file 277/634 Patching output file 278/634 Patching output file 279/634 Patching output file 280/634 Patching output file 281/634 Patching output file 282/634 Patching output file 283/634 Patching output file 284/634 Patching output file 285/634 Patching output file 286/634 Patching output file 287/634 Patching output file 288/634 Patching output file 289/634 Patching output file 290/634 Patching output file 291/634 Patching output file 292/634 Patching output file 293/634 Patching output file 294/634 Patching output file 295/634 Patching output file 296/634 Patching output file 297/634 Patching output file 298/634 Patching output file 299/634 Patching output file 300/634 Patching output file 301/634 Patching output file 302/634 Patching output file 303/634 Patching output file 304/634 Patching output file 305/634 Patching output file 306/634 Patching output file 307/634 Patching output file 308/634 Patching output file 309/634 Patching output file 310/634 Patching output file 311/634 Patching output file 312/634 Patching output file 313/634 Patching output file 314/634 Patching output file 315/634 Patching output file 316/634 Patching output file 317/634 Patching output file 318/634 Patching output file 319/634 Patching output file 320/634 Patching output file 321/634 Patching output file 322/634 Patching output file 323/634 Patching output file 324/634 Patching output file 325/634 Patching output file 326/634 Patching output file 327/634 Patching output file 328/634 Patching output file 329/634 Patching output file 330/634 Patching output file 331/634 Patching output file 332/634 Patching output file 333/634 Patching output file 334/634 Patching output file 335/634 Patching output file 336/634 Patching output file 337/634 Patching output file 338/634 Patching output file 339/634 Patching output file 340/634 Patching output file 341/634 Patching output file 342/634 Patching output file 343/634 Patching output file 344/634 Patching output file 345/634 Patching output file 346/634 Patching output file 347/634 Patching output file 348/634 Patching output file 349/634 Patching output file 350/634 Patching output file 351/634 Patching output file 352/634 Patching output file 353/634 Patching output file 354/634 Patching output file 355/634 Patching output file 356/634 Patching output file 357/634 Patching output file 358/634 Patching output file 359/634 Patching output file 360/634 Patching output file 361/634 Patching output file 362/634 Patching output file 363/634 Patching output file 364/634 Patching output file 365/634 Patching output file 366/634 Patching output file 367/634 Patching output file 368/634 Patching output file 369/634 Patching output file 370/634 Patching output file 371/634 Patching output file 372/634 Patching output file 373/634 Patching output file 374/634 Patching output file 375/634 Patching output file 376/634 Patching output file 377/634 Patching output file 378/634 Patching output file 379/634 Patching output file 380/634 Patching output file 381/634 Patching output file 382/634 Patching output file 383/634 Patching output file 384/634 Patching output file 385/634 Patching output file 386/634 Patching output file 387/634 Patching output file 388/634 Patching output file 389/634 Patching output file 390/634 Patching output file 391/634 Patching output file 392/634 Patching output file 393/634 Patching output file 394/634 Patching output file 395/634 Patching output file 396/634 Patching output file 397/634 Patching output file 398/634 Patching output file 399/634 Patching output file 400/634 Patching output file 401/634 Patching output file 402/634 Patching output file 403/634 Patching output file 404/634 Patching output file 405/634 Patching output file 406/634 Patching output file 407/634 Patching output file 408/634 Patching output file 409/634 Patching output file 410/634 Patching output file 411/634 Patching output file 412/634 Patching output file 413/634 Patching output file 414/634 Patching output file 415/634 Patching output file 416/634 Patching output file 417/634 Patching output file 418/634 Patching output file 419/634 Patching output file 420/634 Patching output file 421/634 Patching output file 422/634 Patching output file 423/634 Patching output file 424/634 Patching output file 425/634 Patching output file 426/634 Patching output file 427/634 Patching output file 428/634 Patching output file 429/634 Patching output file 430/634 Patching output file 431/634 Patching output file 432/634 Patching output file 433/634 Patching output file 434/634 Patching output file 435/634 Patching output file 436/634 Patching output file 437/634 Patching output file 438/634 Patching output file 439/634 Patching output file 440/634 Patching output file 441/634 Patching output file 442/634 Patching output file 443/634 Patching output file 444/634 Patching output file 445/634 Patching output file 446/634 Patching output file 447/634 Patching output file 448/634 Patching output file 449/634 Patching output file 450/634 Patching output file 451/634 Patching output file 452/634 Patching output file 453/634 Patching output file 454/634 Patching output file 455/634 Patching output file 456/634 Patching output file 457/634 Patching output file 458/634 Patching output file 459/634 Patching output file 460/634 Patching output file 461/634 Patching output file 462/634 Patching output file 463/634 Patching output file 464/634 Patching output file 465/634 Patching output file 466/634 Patching output file 467/634 Patching output file 468/634 Patching output file 469/634 Patching output file 470/634 Patching output file 471/634 Patching output file 472/634 Patching output file 473/634 Patching output file 474/634 Patching output file 475/634 Patching output file 476/634 Patching output file 477/634 Patching output file 478/634 Patching output file 479/634 Patching output file 480/634 Patching output file 481/634 Patching output file 482/634 Patching output file 483/634 Patching output file 484/634 Patching output file 485/634 Patching output file 486/634 Patching output file 487/634 Patching output file 488/634 Patching output file 489/634 Patching output file 490/634 Patching output file 491/634 Patching output file 492/634 Patching output file 493/634 Patching output file 494/634 Patching output file 495/634 Patching output file 496/634 Patching output file 497/634 Patching output file 498/634 Patching output file 499/634 Patching output file 500/634 Patching output file 501/634 Patching output file 502/634 Patching output file 503/634 Patching output file 504/634 Patching output file 505/634 Patching output file 506/634 Patching output file 507/634 Patching output file 508/634 Patching output file 509/634 Patching output file 510/634 Patching output file 511/634 Patching output file 512/634 Patching output file 513/634 Patching output file 514/634 Patching output file 515/634 Patching output file 516/634 Patching output file 517/634 Patching output file 518/634 Patching output file 519/634 Patching output file 520/634 Patching output file 521/634 Patching output file 522/634 Patching output file 523/634 Patching output file 524/634 Patching output file 525/634 Patching output file 526/634 Patching output file 527/634 Patching output file 528/634 Patching output file 529/634 Patching output file 530/634 Patching output file 531/634 Patching output file 532/634 Patching output file 533/634 Patching output file 534/634 Patching output file 535/634 Patching output file 536/634 Patching output file 537/634 Patching output file 538/634 Patching output file 539/634 Patching output file 540/634 Patching output file 541/634 Patching output file 542/634 Patching output file 543/634 Patching output file 544/634 Patching output file 545/634 Patching output file 546/634 Patching output file 547/634 Patching output file 548/634 Patching output file 549/634 Patching output file 550/634 Patching output file 551/634 Patching output file 552/634 Patching output file 553/634 Patching output file 554/634 Patching output file 555/634 Patching output file 556/634 Patching output file 557/634 Patching output file 558/634 Patching output file 559/634 Patching output file 560/634 Patching output file 561/634 Patching output file 562/634 Patching output file 563/634 Patching output file 564/634 Patching output file 565/634 Patching output file 566/634 Patching output file 567/634 Patching output file 568/634 Patching output file 569/634 Patching output file 570/634 Patching output file 571/634 Patching output file 572/634 Patching output file 573/634 Patching output file 574/634 Patching output file 575/634 Patching output file 576/634 Patching output file 577/634 Patching output file 578/634 Patching output file 579/634 Patching output file 580/634 Patching output file 581/634 Patching output file 582/634 Patching output file 583/634 Patching output file 584/634 Patching output file 585/634 Patching output file 586/634 Patching output file 587/634 Patching output file 588/634 Patching output file 589/634 Patching output file 590/634 Patching output file 591/634 Patching output file 592/634 Patching output file 593/634 Patching output file 594/634 Patching output file 595/634 Patching output file 596/634 Patching output file 597/634 Patching output file 598/634 Patching output file 599/634 Patching output file 600/634 Patching output file 601/634 Patching output file 602/634 Patching output file 603/634 Patching output file 604/634 Patching output file 605/634 Patching output file 606/634 Patching output file 607/634 Patching output file 608/634 Patching output file 609/634 Patching output file 610/634 Patching output file 611/634 Patching output file 612/634 Patching output file 613/634 Patching output file 614/634 Patching output file 615/634 Patching output file 616/634 Patching output file 617/634 Patching output file 618/634 Patching output file 619/634 Patching output file 620/634 Patching output file 621/634 Patching output file 622/634 Patching output file 623/634 Patching output file 624/634 Patching output file 625/634 Patching output file 626/634 Patching output file 627/634 Patching output file 628/634 Patching output file 629/634 Patching output file 630/634 Patching output file 631/634 Patching output file 632/634 Patching output file 633/634 Patching output file 634/634 lookup cache used 10530/65536 hits=83423 misses=14157 finished... # Make sure we are in nonstopmode for generating the pdf by patching the Makefile # Older doxygen versions do not have LATEX_CMD grep -q "pdflatex refman" _build/doxygen_latex/Makefile && sed -i.bak 's/pdflatex refman/pdflatex -interaction=nonstopmode refman/' _build/doxygen_latex/Makefile make -C _build/doxygen_latex LATEX_CMD="pdflatex -interaction=nonstopmode" make[1]: Entering directory '/home/cermak/src/MOM6.devrob/docs/_build/doxygen_latex' rm -f *.ps *.dvi *.aux *.toc *.idx *.ind *.ilg *.log *.out *.brf *.blg *.bbl refman.pdf pdflatex -interaction=nonstopmode refman This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./refman.tex LaTeX2e <2020-02-02> patch level 2 L3 programming layer <2020-02-14> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2019/12/20 v1.4l Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/fixltx2e.sty Package fixltx2e Warning: fixltx2e is not required with releases after 2015 (fixltx2e) All fixes are now in the LaTeX kernel. (fixltx2e) See the latexrelease package for details. ) (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty) (./doxygen.sty (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/colortbl/colortbl.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tabu/tabu.sty (/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/tabularx.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty)) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjustbox.sty (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/trimclip.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg))) (/usr/share/texlive/texmf-dist/tex/latex/collectbox/collectbox.sty) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/tc-pdftex.def)) (/usr/share/texlive/texmf-dist/tex/latex/ifoddpage/ifoddpage.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/wasysym.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/helvet.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/courier.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/sectsty/sectsty.sty LaTeX Warning: Command \underbar has changed. Check if current package is valid. LaTeX Warning: Command \underline has changed. Check if current package is valid. ) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/tocloft/tocloft.sty) Writing index file refman.idx (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/backref.sty (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty) (/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty) (/usr/share/texlive/texmf-dist/tex/latex/caption/ltcaption.sty)) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def) No file refman.aux. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/uwasy.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] [2] [1] [2] Chapter 1. (./index.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd)) [1] [2] Chapter 2. (./ALE.tex Package natbib Warning: Citation `adcroft2006' on page 3 undefined on input lin e 2. Package natbib Warning: Citation `bleck2002' on page 3 undefined on input line 2. Package natbib Warning: Citation `hirt1997' on page 3 undefined on input line 2 . Package natbib Warning: Citation `dukowicz2000' on page 3 undefined on input li ne 2. LaTeX Warning: Reference `eq:h-horz-momentum' on page 3 undefined on input line 4. LaTeX Warning: Reference `eq:h-thickness-equation' on page 3 undefined on input line 4. LaTeX Warning: Reference `eq:h-temperature-equation' on page 3 undefined on inp ut line 4. LaTeX Warning: Reference `eq:h-salinity-equation' on page 3 undefined on input line 4. Package natbib Warning: Citation `white2008' on page 3 undefined on input line 6. Package natbib Warning: Citation `white2009' on page 3 undefined on input line 6. LaTeX Warning: Reference `eq:h-thickness-equation' on page 3 undefined on input line 8. LaTeX Warning: Reference `eq:h-temperature-equation' on page 3 undefined on inp ut line 8. LaTeX Font Warning: Font shape `U/wasy/b/n' in size <7> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. LaTeX Font Warning: Font shape `U/wasy/b/n' in size <5> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. LaTeX Warning: Reference `eq:ale-thickness-equation' on page 3 undefined on inp ut line 12. LaTeX Warning: Reference `eq:ale-new-grid' on page 3 undefined on input line 12 . LaTeX Warning: Reference `eq:h-thickness-equation' on page 3 undefined on input line 12. LaTeX Warning: Reference `eq:ale-new-grid' on page 3 undefined on input line 12 . [3] Package natbib Warning: Citation `hallberg2009' on page 4 undefined on input li ne 14. ) [4] Chapter 3. (./ALE_Timestep.tex [5 <./remapping1.png>] Underfull \vbox (badness 10000) has occurred while \output is active [6 <./rema pping2.png>]) [7 <./remapping3.png>] [8] Chapter 4. (./Baroclinic_Momentum_Equations.tex Package natbib Warning: Citation `shchepetkin2005' on page 9 undefined on input line 6. Underfull \vbox (badness 7326) has occurred while \output is active [9] Underfull \vbox (badness 10000) has occurred while \output is active [10 <./tim estep_MOM6.png>]) [11 <./timestep_ROMS.png>] [12] Chapter 5. (./Barotropic_Baroclinic_Coupling.tex [13] Package natbib Warning: Citation `hallberg2009' on page 14 undefined on input l ine 26. [14] [15] Underfull \vbox (badness 10000) has occurred while \output is active [16 <./h_P PM.png>] [17 <./Newton_PPM.png>] Underfull \vbox (badness 4699) has occurred while \output is active [18] [19 <./bottom_drag.png>] [20]) [21 <./bt_bc_thickness.png>] [22] Chapter 6. (./Barotropic_Momentum_Equations.tex Package natbib Warning: Citation `bleck1990' on page 23 undefined on input line 19. Package natbib Warning: Citation `hallberg1997a' on page 23 undefined on input line 19. ) [23] [24] Chapter 7. (./Discrete_Coriolis.tex LaTeX Warning: Reference `eq:h-horz-momentum' on page 25 undefined on input lin e 2. Package natbib Warning: Citation `sadourny1975' on page 25 undefined on input l ine 9. Package natbib Warning: Citation `sadourny1975' on page 25 undefined on input l ine 13. Package natbib Warning: Citation `arakawa1981' on page 25 undefined on input li ne 15. [25] Package natbib Warning: Citation `arakawa1990' on page 26 undefined on input li ne 17. LaTeX Warning: Reference `eq:Coriolis_abcd' on page 26 undefined on input line 19. ) [26] [27] [28] Chapter 8. (./Discrete_Grids.tex [29 <./Arakawa_C_grid.png>] [30 <./Grid_metrics.png>]) [31 <./cell_3d.png>] [32] Chapter 9. (./Discrete_OBC.tex) [33] [34] Chapter 10. (./Discrete_PG.tex Package natbib Warning: Citation `adcroft2008' on page 35 undefined on input li ne 2. Package natbib Warning: Citation `hallberg1997' on page 35 undefined on input l ine 4. Package natbib Warning: Citation `sun1999' on page 35 undefined on input line 4 . Package natbib Warning: Citation `hallberg2005' on page 35 undefined on input l ine 4. Package natbib Warning: Citation `adcroft2008' on page 35 undefined on input li ne 4. [35] Package natbib Warning: Citation `wright1997' on page 36 undefined on input lin e 19. [36 <./PG_loop.png>] LaTeX Warning: Reference `eq:PG_vert' on page 37 undefined on input line 33. LaTeX Warning: Reference `eq:PG_loop' on page 37 undefined on input line 35. ) [37] [38] Chapter 11. (./Energetic_Consistency.tex) [39] [40] Chapter 12. (./Finite_Difference_Operators.tex) [41] [42] Chapter 13. (./General_Coordinate.tex Package natbib Warning: Citation `bleck2002' on page 43 undefined on input line 9. LaTeX Warning: Reference `eq:h-horz-momentum' on page 43 undefined on input lin e 13. Package natbib Warning: Citation `adcroft2008' on page 43 undefined on input li ne 13. Package natbib Warning: Citation `white2008' on page 43 undefined on input line 13. Package natbib Warning: Citation `white2009' on page 43 undefined on input line 13. ) [43] [44] Chapter 14. (./Governing_Equations.tex Package natbib Warning: Citation `wright1997' on page 45 undefined on input lin e 7. [45]) [46] Chapter 15. (./Notation.tex) [47] [48] Chapter 16. (./PPM.tex Package natbib Warning: Citation `colella1984' on page 49 undefined on input li ne 2. Package natbib Warning: Citation `carpenter1990' on page 49 undefined on input line 2. Underfull \vbox (badness 5374) has occurred while \output is active [49] [50 <./ppm_arc.png>] Package natbib Warning: Citation `colella1984' on page 51 undefined on input li ne 29. Package natbib Warning: Citation `huynh1997' on page 51 undefined on input line 29. ) [51] [52] Chapter 17. (./Sea_Ice.tex) [53] [54] Chapter 18. (./Solar_Radiation.tex) [55] [56] Chapter 19. (./Specifics.tex LaTeX Warning: Reference `eq:h-horz-momentum' on page 57 undefined on input lin e 3. Package natbib Warning: Citation `sadourny1975' on page 57 undefined on input l ine 5. Package natbib Warning: Citation `SMGbook' on page 57 undefined on input line 7 . Package natbib Warning: Citation `griffies2000' on page 57 undefined on input l ine 9. [57] LaTeX Warning: Reference `eq:h-hydrostatic-equation' on page 58 undefined on in put line 10. Package natbib Warning: Citation `adcroft2008' on page 58 undefined on input li ne 10. Package natbib Warning: Citation `bleck2002' on page 58 undefined on input line 10. LaTeX Warning: Reference `eq:h-thickness-equation' on page 58 undefined on inpu t line 11. Package natbib Warning: Citation `colella1984' on page 58 undefined on input li ne 11. LaTeX Warning: Reference `eq:h-temperature-equation' on page 58 undefined on in put line 13. LaTeX Warning: Reference `eq:h-salinity-equation' on page 58 undefined on input line 13. Package natbib Warning: Citation `fox-kemper2011' on page 58 undefined on input line 15. Package natbib Warning: Citation `gent1995' on page 58 undefined on input line 15. Package natbib Warning: Citation `mcdougall2001' on page 58 undefined on input line 15. LaTeX Warning: Reference `eq:h-equation-of-state' on page 58 undefined on input line 16. Package natbib Warning: Citation `GVbook' on page 58 undefined on input line 16 . Package natbib Warning: Citation `wright1997' on page 58 undefined on input lin e 16. Package natbib Warning: Citation `TEOS2010' on page 58 undefined on input line 16. Package natbib Warning: Citation `wright1997' on page 58 undefined on input lin e 16. ) [58] Chapter 20. (./Timestep_Overview.tex) [59 <./timesteps_4.png>] [60] Chapter 21. (./Equation_of_State.tex Package natbib Warning: Citation `wright1997' on page 61 undefined on input lin e 3. Package natbib Warning: Citation `roquet2015' on page 61 undefined on input lin e 4. Package natbib Warning: Citation `jackett1995' on page 61 undefined on input li ne 5. [61] Package natbib Warning: Citation `millero1978' on page 62 undefined on input li ne 12. ) [62] Chapter 22. (./Diagnostics.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. [63] [64] [65] [66]) [67] [68] Chapter 23. (./Domain_Decomposition.tex) [69] [70] Chapter 24. (./Global_Grids.tex) [71] [72] Chapter 25. (./Horizontal_Indexing.tex Underfull \vbox (badness 7981) has occurred while \output is active [73] [74] Underfull \vbox (badness 10000) has occurred while \output is active [75 <./Hor izontal_NE_indexing_nonsym.png>] Underfull \hbox (badness 10000) in paragraph at lines 54--55 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed) []:[]: D !$\ OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at h-points Overfull \hbox (16.7466pt too wide) in paragraph at lines 55--56 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed, GV%ke) []:[] : h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Layer thickness [76 <./Horizontal_NE_indexing_sym.png>] Underfull \hbox (badness 10000) in paragraph at lines 61--62 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%jsd[]:HI%jed, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow Underfull \hbox (badness 10000) in paragraph at lines 67--68 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%JsdB[]:HI%JedB, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow Overfull \hbox (16.7466pt too wide) in paragraph at lines 72--73 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB) []:[]: D q !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at q-points Overfull \hbox (16.7466pt too wide) in paragraph at lines 73--74 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB, GV%ke) [ ]:[]: vort !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Vertical ) [77] [78] Chapter 26. (./Parallel_IO.tex) [79] [80] Chapter 27. (./Regional_Grids.tex) [81] [82] Chapter 28. (./Runtime_Parameter_System.tex [83] [84]) [85] [86] Chapter 29. (./Testing.tex Underfull \hbox (badness 10000) detected at line 12 [][][] [87] [88 <./consortium.png>] Underfull \hbox (badness 10000) detected at line 73 [][][] [89] [90 <./Rotated_indices.png>]) [91] [92] Chapter 30. (./Vertical_Grids.tex) [93] [94] Chapter 31. (./CVMix_KPP.tex Package natbib Warning: Citation `large1994' on page 95 undefined on input line 1. Package natbib Warning: Citation `large1994' on page 95 undefined on input line 4. [95] Underfull \hbox (badness 10000) detected at line 10 [][][] ) [96] Chapter 32. (./Tracer_Advection.tex Package natbib Warning: Citation `easter1993' on page 97 undefined on input lin e 1. Package natbib Warning: Citation `colella1984' on page 97 undefined on input li ne 1. Package natbib Warning: Citation `huynh1997' on page 97 undefined on input line 1. Package natbib Warning: Citation `lin1994' on page 97 undefined on input line 5 . [97]) [98] Chapter 33. (./Discrete_Tracer.tex) [99] [100] Chapter 34. (./Horizontal_Diffusion.tex [101 <./eddy_fluxes.png>] Package natbib Warning: Citation `shao2019-in-review' on page 102 undefined on input line 17. [102 <./shao0.png>] [103 <./shao1.png>] [104 <./shao2.png>] [105 <./shao3.png>] Underfull \vbox (badness 10000) has occurred while \output is active [106 <./sh ao4.png>] Underfull \vbox (badness 6825) has occurred while \output is active [107 <./sha o5.png>] Underfull \vbox (badness 10000) has occurred while \output is active [108 <./sb l1.png>]) [109 <./sbl2.png>] [110] Chapter 35. (./Passive_Tracers.tex) [111] [112] Chapter 36. (./Tracer_Fluxes.tex) [113] [114] Chapter 37. (./Tracer_Timestep.tex) [115] [116] Chapter 38. (./Tracer_Transport_Equations.tex [117 <./PPM_1d.png>] Package natbib Warning: Citation `easter1993' on page 118 undefined on input li ne 15. [118] Package natbib Warning: Citation `easter1993' on page 119 undefined on input li ne 50. Package natbib Warning: Citation `durran2010' on page 119 undefined on input li ne 50. Package natbib Warning: Citation `russell1981' on page 119 undefined on input l ine 50. ) [119] [120] Chapter 39. (./Vertical_Diffusion.tex) [121] [122] Chapter 40. (./md__home_cermak_src_MOM6_8devrob_config_src_external_GFDL_ocean_BGC_README.t ex) [123] [124] Chapter 41. (./md__home_cermak_src_MOM6_8devrob_config_src_external_ODA_hooks_README.tex) [125] [126] Chapter 42. (./md__home_cermak_src_MOM6_8devrob_config_src_external_README.tex) [127] [128] Chapter 43. (./todo.tex [129]) [130] Chapter 44. (./namespaces.tex LaTeX Warning: Reference `namespaceadjustment__initialization' on page 131 unde fined on input line 3. LaTeX Warning: Reference `namespaceadvection__test__tracer' on page 131 undefin ed on input line 4. LaTeX Warning: Reference `namespaceatmos__ocean__fluxes__mod' on page 131 undef ined on input line 5. LaTeX Warning: Reference `namespacebaroclinic__zone__initialization' on page 13 1 undefined on input line 6. LaTeX Warning: Reference `namespacebasin__builder' on page 131 undefined on inp ut line 7. LaTeX Warning: Reference `namespacebenchmark__initialization' on page 131 undef ined on input line 8. LaTeX Warning: Reference `namespacebfb__initialization' on page 131 undefined o n input line 9. LaTeX Warning: Reference `namespacebfb__surface__forcing' on page 131 undefined on input line 10. LaTeX Warning: Reference `namespaceboundary__impulse__tracer' on page 131 undef ined on input line 11. LaTeX Warning: Reference `namespacecircle__obcs__initialization' on page 131 un defined on input line 12. LaTeX Warning: Reference `namespacecoord__adapt' on page 131 undefined on input line 13. LaTeX Warning: Reference `namespacecoord__hycom' on page 131 undefined on input line 14. LaTeX Warning: Reference `namespacecoord__rho' on page 131 undefined on input l ine 15. LaTeX Warning: Reference `namespacecoord__sigma' on page 131 undefined on input line 16. LaTeX Warning: Reference `namespacecoord__slight' on page 131 undefined on inpu t line 17. LaTeX Warning: Reference `namespacecoord__zlike' on page 131 undefined on input line 18. LaTeX Warning: Reference `namespacedense__water__initialization' on page 131 un defined on input line 19. [131] LaTeX Warning: Reference `namespacedome2d__initialization' on page 132 undefine d on input line 20. LaTeX Warning: Reference `namespacedome__initialization' on page 132 undefined on input line 21. LaTeX Warning: Reference `namespacedome__tracer' on page 132 undefined on input line 22. LaTeX Warning: Reference `namespacedumbbell__initialization' on page 132 undefi ned on input line 23. LaTeX Warning: Reference `namespacedumbbell__surface__forcing' on page 132 unde fined on input line 24. LaTeX Warning: Reference `namespacedyed__channel__initialization' on page 132 u ndefined on input line 25. LaTeX Warning: Reference `namespacedyed__obc__tracer' on page 132 undefined on input line 26. LaTeX Warning: Reference `namespacedyed__obcs__initialization' on page 132 unde fined on input line 27. LaTeX Warning: Reference `namespaceexternal__gwave__initialization' on page 132 undefined on input line 28. LaTeX Warning: Reference `namespaceg__tracer__utils' on page 132 undefined on i nput line 29. LaTeX Warning: Reference `namespacegeneric__tracer' on page 132 undefined on in put line 30. LaTeX Warning: Reference `namespaceideal__age__example' on page 132 undefined o n input line 31. LaTeX Warning: Reference `namespaceidealized__hurricane' on page 132 undefined on input line 32. LaTeX Warning: Reference `namespaceisomip__initialization' on page 132 undefine d on input line 33. LaTeX Warning: Reference `namespaceisomip__tracer' on page 132 undefined on inp ut line 34. LaTeX Warning: Reference `namespacekdtree' on page 132 undefined on input line 35. LaTeX Warning: Reference `namespacekelvin__initialization' on page 132 undefine d on input line 36. LaTeX Warning: Reference `namespacelock__exchange__initialization' on page 132 undefined on input line 37. LaTeX Warning: Reference `namespacemeso__surface__forcing' on page 132 undefine d on input line 38. LaTeX Warning: Reference `namespacemom' on page 132 undefined on input line 39. LaTeX Warning: Reference `namespacemom__ale' on page 132 undefined on input lin e 40. LaTeX Warning: Reference `namespacemom__ale__sponge' on page 132 undefined on i nput line 41. LaTeX Warning: Reference `namespacemom__array__transform' on page 132 undefined on input line 42. Underfull \vbox (badness 6708) has occurred while \output is active [132] LaTeX Warning: Reference `namespacemom__barotropic' on page 133 undefined on in put line 43. LaTeX Warning: Reference `namespacemom__bkgnd__mixing' on page 133 undefined on input line 44. LaTeX Warning: Reference `namespacemom__boundary__update' on page 133 undefined on input line 45. LaTeX Warning: Reference `namespacemom__bulk__mixed__layer' on page 133 undefin ed on input line 46. LaTeX Warning: Reference `namespacemom__checksum__packages' on page 133 undefin ed on input line 47. LaTeX Warning: Reference `namespacemom__checksums' on page 133 undefined on inp ut line 48. LaTeX Warning: Reference `namespacemom__coms' on page 133 undefined on input li ne 49. LaTeX Warning: Reference `namespacemom__constants' on page 133 undefined on inp ut line 50. LaTeX Warning: Reference `namespacemom__continuity' on page 133 undefined on in put line 51. LaTeX Warning: Reference `namespacemom__continuity__ppm' on page 133 undefined on input line 52. LaTeX Warning: Reference `namespacemom__controlled__forcing' on page 133 undefi ned on input line 53. LaTeX Warning: Reference `namespacemom__coord__initialization' on page 133 unde fined on input line 54. LaTeX Warning: Reference `namespacemom__coriolisadv' on page 133 undefined on i nput line 55. LaTeX Warning: Reference `namespacemom__cpu__clock' on page 133 undefined on in put line 56. LaTeX Warning: Reference `namespacemom__cvmix__conv' on page 133 undefined on i nput line 57. LaTeX Warning: Reference `namespacemom__cvmix__ddiff' on page 133 undefined on input line 58. LaTeX Warning: Reference `namespacemom__cvmix__kpp' on page 133 undefined on in put line 59. LaTeX Warning: Reference `namespacemom__cvmix__shear' on page 133 undefined on input line 60. LaTeX Warning: Reference `namespacemom__debugging' on page 133 undefined on inp ut line 61. LaTeX Warning: Reference `namespacemom__density__integrals' on page 133 undefin ed on input line 62. LaTeX Warning: Reference `namespacemom__diabatic__aux' on page 133 undefined on input line 63. LaTeX Warning: Reference `namespacemom__diabatic__driver' on page 133 undefined on input line 64. LaTeX Warning: Reference `namespacemom__diag__manager__wrapper' on page 133 und efined on input line 65. LaTeX Warning: Reference `namespacemom__diag__mediator' on page 133 undefined o n input line 66. Underfull \vbox (badness 10000) has occurred while \output is active [133] LaTeX Warning: Reference `namespacemom__diag__remap' on page 134 undefined on i nput line 67. LaTeX Warning: Reference `namespacemom__diag__vkernels' on page 134 undefined o n input line 68. LaTeX Warning: Reference `namespacemom__diagnostics' on page 134 undefined on i nput line 69. LaTeX Warning: Reference `namespacemom__diapyc__energy__req' on page 134 undefi ned on input line 70. LaTeX Warning: Reference `namespacemom__document' on page 134 undefined on inpu t line 71. LaTeX Warning: Reference `namespacemom__domains' on page 134 undefined on input line 72. LaTeX Warning: Reference `namespacemom__dyn__horgrid' on page 134 undefined on input line 73. LaTeX Warning: Reference `namespacemom__dynamics__split__rk2' on page 134 undef ined on input line 74. LaTeX Warning: Reference `namespacemom__dynamics__unsplit' on page 134 undefine d on input line 75. LaTeX Warning: Reference `namespacemom__dynamics__unsplit__rk2' on page 134 und efined on input line 76. LaTeX Warning: Reference `namespaceMOM__energetic__PBL' on page 134 undefined o n input line 77. LaTeX Warning: Reference `namespacemom__energetic__pbl' on page 134 undefined o n input line 78. LaTeX Warning: Reference `namespacemom__entrain__diffusive' on page 134 undefin ed on input line 79. LaTeX Warning: Reference `namespacemom__eos' on page 134 undefined on input lin e 80. LaTeX Warning: Reference `namespacemom__eos__linear' on page 134 undefined on i nput line 81. LaTeX Warning: Reference `namespacemom__eos__nemo' on page 134 undefined on inp ut line 82. LaTeX Warning: Reference `namespacemom__eos__teos10' on page 134 undefined on i nput line 83. LaTeX Warning: Reference `namespacemom__eos__unesco' on page 134 undefined on i nput line 84. LaTeX Warning: Reference `namespacemom__eos__wright' on page 134 undefined on i nput line 85. LaTeX Warning: Reference `namespacemom__error__handler' on page 134 undefined o n input line 86. LaTeX Warning: Reference `namespacemom__file__parser' on page 134 undefined on input line 87. LaTeX Warning: Reference `namespacemom__fixed__initialization' on page 134 unde fined on input line 88. LaTeX Warning: Reference `namespacemom__forcing__type' on page 134 undefined on input line 89. LaTeX Warning: Reference `namespacemom__full__convection' on page 134 undefined on input line 90. LaTeX Warning: Reference `namespacemom__generic__tracer' on page 134 undefined on input line 91. [134] LaTeX Warning: Reference `namespacemom__geothermal' on page 135 undefined on in put line 92. LaTeX Warning: Reference `namespacemom__get__input' on page 135 undefined on in put line 93. LaTeX Warning: Reference `namespacemom__grid' on page 135 undefined on input li ne 94. LaTeX Warning: Reference `namespacemom__grid__initialize' on page 135 undefined on input line 95. LaTeX Warning: Reference `namespacemom__hor__index' on page 135 undefined on in put line 96. LaTeX Warning: Reference `namespacemom__hor__visc' on page 135 undefined on inp ut line 97. LaTeX Warning: Reference `namespacemom__horizontal__regridding' on page 135 und efined on input line 98. LaTeX Warning: Reference `namespacemom__ice__shelf' on page 135 undefined on in put line 99. LaTeX Warning: Reference `namespacemom__ice__shelf__dynamics' on page 135 undef ined on input line 100. LaTeX Warning: Reference `namespacemom__ice__shelf__initialize' on page 135 und efined on input line 101. LaTeX Warning: Reference `namespacemom__ice__shelf__state' on page 135 undefine d on input line 102. LaTeX Warning: Reference `namespacemom__int__tide__input' on page 135 undefined on input line 103. LaTeX Warning: Reference `namespacemom__interface__heights' on page 135 undefin ed on input line 104. LaTeX Warning: Reference `namespacemom__internal__tides' on page 135 undefined on input line 105. LaTeX Warning: Reference `namespacemom__intrinsic__functions' on page 135 undef ined on input line 106. LaTeX Warning: Reference `namespacemom__io' on page 135 undefined on input line 107. LaTeX Warning: Reference `namespacemom__isopycnal__slopes' on page 135 undefine d on input line 108. LaTeX Warning: Reference `namespacemom__kappa__shear' on page 135 undefined on input line 109. LaTeX Warning: Reference `namespacemom__lateral__boundary__diffusion' on page 1 35 undefined on input line 110. LaTeX Warning: Reference `namespacemom__lateral__mixing__coeffs' on page 135 un defined on input line 111. LaTeX Warning: Reference `namespacemom__marine__ice' on page 135 undefined on i nput line 112. LaTeX Warning: Reference `namespacemom__meke' on page 135 undefined on input li ne 113. LaTeX Warning: Reference `namespacemom__mixed__layer__restrat' on page 135 unde fined on input line 114. Underfull \vbox (badness 7667) has occurred while \output is active [135] LaTeX Warning: Reference `namespacemom__neutral__diffusion' on page 136 undefin ed on input line 115. LaTeX Warning: Reference `namespacemom__obsolete__diagnostics' on page 136 unde fined on input line 116. LaTeX Warning: Reference `namespacemom__obsolete__params' on page 136 undefined on input line 117. LaTeX Warning: Reference `namespacemom__ocmip2__cfc' on page 136 undefined on i nput line 118. LaTeX Warning: Reference `namespaceMOM__oda__driver__mod' on page 136 undefined on input line 119. LaTeX Warning: Reference `namespacemom__oda__driver__mod' on page 136 undefined on input line 120. LaTeX Warning: Reference `namespacemom__offline__aux' on page 136 undefined on input line 121. LaTeX Warning: Reference `namespacemom__offline__main' on page 136 undefined on input line 122. LaTeX Warning: Reference `namespacemom__opacity' on page 136 undefined on input line 123. LaTeX Warning: Reference `namespacemom__open__boundary' on page 136 undefined o n input line 124. LaTeX Warning: Reference `namespacemom__pointaccel' on page 136 undefined on in put line 125. LaTeX Warning: Reference `namespacemom__pressureforce' on page 136 undefined on input line 126. LaTeX Warning: Reference `namespacemom__pressureforce__fv' on page 136 undefine d on input line 127. LaTeX Warning: Reference `namespacemom__pressureforce__mont' on page 136 undefi ned on input line 128. LaTeX Warning: Reference `namespacemom__random' on page 136 undefined on input line 129. LaTeX Warning: Reference `namespacemom__regridding' on page 136 undefined on in put line 130. LaTeX Warning: Reference `namespacemom__regularize__layers' on page 136 undefin ed on input line 131. LaTeX Warning: Reference `namespacemom__remapping' on page 136 undefined on inp ut line 132. LaTeX Warning: Reference `namespacemom__restart' on page 136 undefined on input line 133. LaTeX Warning: Reference `namespacemom__safe__alloc' on page 136 undefined on i nput line 134. LaTeX Warning: Reference `namespacemom__set__diffusivity' on page 136 undefined on input line 135. LaTeX Warning: Reference `namespacemom__set__visc' on page 136 undefined on inp ut line 136. LaTeX Warning: Reference `namespacemom__shared__initialization' on page 136 und efined on input line 137. LaTeX Warning: Reference `namespacemom__spatial__means' on page 136 undefined o n input line 138. Underfull \vbox (badness 6708) has occurred while \output is active [136] LaTeX Warning: Reference `namespacemom__sponge' on page 137 undefined on input line 139. LaTeX Warning: Reference `namespacemom__state__initialization' on page 137 unde fined on input line 140. LaTeX Warning: Reference `namespacemom__string__functions' on page 137 undefine d on input line 141. LaTeX Warning: Reference `namespacemom__sum__output' on page 137 undefined on i nput line 142. LaTeX Warning: Reference `namespacemom__surface__forcing' on page 137 undefined on input line 143. LaTeX Warning: Reference `namespacemom__tfreeze' on page 137 undefined on input line 144. LaTeX Warning: Reference `namespacemom__thickness__diffuse' on page 137 undefin ed on input line 145. LaTeX Warning: Reference `namespacemom__tidal__forcing' on page 137 undefined o n input line 146. LaTeX Warning: Reference `namespacemom__tidal__mixing' on page 137 undefined on input line 147. LaTeX Warning: Reference `namespacemom__time__manager' on page 137 undefined on input line 148. LaTeX Warning: Reference `namespacemom__tracer__advect' on page 137 undefined o n input line 149. LaTeX Warning: Reference `namespacemom__tracer__diabatic' on page 137 undefined on input line 150. LaTeX Warning: Reference `namespaceMOM__tracer__flow__control' on page 137 unde fined on input line 151. LaTeX Warning: Reference `namespacemom__tracer__flow__control' on page 137 unde fined on input line 152. LaTeX Warning: Reference `namespacemom__tracer__hor__diff' on page 137 undefine d on input line 153. LaTeX Warning: Reference `namespacemom__tracer__initialization__from__z' on pag e 137 undefined on input line 154. LaTeX Warning: Reference `namespacemom__tracer__registry' on page 137 undefined on input line 155. LaTeX Warning: Reference `namespacemom__tracer__z__init' on page 137 undefined on input line 156. LaTeX Warning: Reference `namespacemom__transcribe__grid' on page 137 undefined on input line 157. LaTeX Warning: Reference `namespacemom__transform__fms' on page 137 undefined o n input line 158. LaTeX Warning: Reference `namespacemom__unit__scaling' on page 137 undefined on input line 159. LaTeX Warning: Reference `namespacemom__unit__tests' on page 137 undefined on i nput line 160. LaTeX Warning: Reference `namespacemom__variables' on page 137 undefined on inp ut line 161. Underfull \vbox (badness 7667) has occurred while \output is active [137] LaTeX Warning: Reference `namespacemom__vert__friction' on page 138 undefined o n input line 162. LaTeX Warning: Reference `namespacemom__verticalgrid' on page 138 undefined on input line 163. LaTeX Warning: Reference `namespacemom__wave__interface' on page 138 undefined on input line 164. LaTeX Warning: Reference `namespacemom__wave__speed' on page 138 undefined on i nput line 165. LaTeX Warning: Reference `namespacemom__wave__structure' on page 138 undefined on input line 166. LaTeX Warning: Reference `namespacemom__write__cputime' on page 138 undefined o n input line 167. LaTeX Warning: Reference `namespaceneverworld__initialization' on page 138 unde fined on input line 168. LaTeX Warning: Reference `namespaceocean__da__core__mod' on page 138 undefined on input line 169. LaTeX Warning: Reference `namespaceocean__da__types__mod' on page 138 undefined on input line 170. LaTeX Warning: Reference `namespaceocean__model__mod' on page 138 undefined on input line 171. LaTeX Warning: Reference `namespaceoil__tracer' on page 138 undefined on input line 172. LaTeX Warning: Reference `namespacep1m__functions' on page 138 undefined on inp ut line 173. LaTeX Warning: Reference `namespacep3m__functions' on page 138 undefined on inp ut line 174. LaTeX Warning: Reference `namespacePCM__functions' on page 138 undefined on inp ut line 175. LaTeX Warning: Reference `namespacepcm__functions' on page 138 undefined on inp ut line 176. LaTeX Warning: Reference `namespacephillips__initialization' on page 138 undefi ned on input line 177. LaTeX Warning: Reference `namespaceplm__functions' on page 138 undefined on inp ut line 178. LaTeX Warning: Reference `namespacepolynomial__functions' on page 138 undefined on input line 179. LaTeX Warning: Reference `namespaceppm__functions' on page 138 undefined on inp ut line 180. LaTeX Warning: Reference `namespacepqm__functions' on page 138 undefined on inp ut line 181. LaTeX Warning: Reference `namespacepseudo__salt__tracer' on page 138 undefined on input line 182. LaTeX Warning: Reference `namespaceregional__dyes' on page 138 undefined on inp ut line 183. LaTeX Warning: Reference `namespaceregrid__consts' on page 138 undefined on inp ut line 184. LaTeX Warning: Reference `namespaceregrid__edge__values' on page 138 undefined on input line 185. LaTeX Warning: Reference `namespaceregrid__interp' on page 138 undefined on inp ut line 186. LaTeX Warning: Reference `namespaceregrid__solvers' on page 138 undefined on in put line 187. LaTeX Warning: Reference `namespacergc__tracer' on page 138 undefined on input line 188. [138] LaTeX Warning: Reference `namespacerossby__front__2d__initialization' on page 1 39 undefined on input line 189. LaTeX Warning: Reference `namespacescm__cvmix__tests' on page 139 undefined on input line 190. LaTeX Warning: Reference `namespaceseamount__initialization' on page 139 undefi ned on input line 191. LaTeX Warning: Reference `namespaceshelfwave__initialization' on page 139 undef ined on input line 192. LaTeX Warning: Reference `namespacesloshing__initialization' on page 139 undefi ned on input line 193. LaTeX Warning: Reference `namespacesoliton__initialization' on page 139 undefin ed on input line 194. LaTeX Warning: Reference `namespacesupercritical__initialization' on page 139 u ndefined on input line 195. LaTeX Warning: Reference `namespacetidal__bay__initialization' on page 139 unde fined on input line 196. LaTeX Warning: Reference `namespacetidal__forcing' on page 139 undefined on inp ut line 197. LaTeX Warning: Reference `namespaceuser__change__diffusivity' on page 139 undef ined on input line 198. LaTeX Warning: Reference `namespaceuser__initialization' on page 139 undefined on input line 199. LaTeX Warning: Reference `namespaceuser__revise__forcing' on page 139 undefined on input line 200. LaTeX Warning: Reference `namespaceuser__shelf__init' on page 139 undefined on input line 201. LaTeX Warning: Reference `namespaceuser__surface__forcing' on page 139 undefine d on input line 202. LaTeX Warning: Reference `namespaceuser__tracer__example' on page 139 undefined on input line 203. LaTeX Warning: Reference `namespacewrite__ocean__obs__mod' on page 139 undefine d on input line 204. ) [139] [140] Chapter 45. (./annotated.tex LaTeX Warning: Reference `structmom__variables_1_1accel__diag__ptrs' on page 14 1 undefined on input line 3. LaTeX Warning: Reference `structcoord__adapt_1_1adapt__cs' on page 141 undefine d on input line 4. LaTeX Warning: Reference `structadvection__test__tracer_1_1advection__test__tra cer__cs' on page 141 undefined on input line 5. LaTeX Warning: Reference `structmom__ale_1_1ale__cs' on page 141 undefined on i nput line 6. LaTeX Warning: Reference `structmom__ale__sponge_1_1ale__sponge__cs' on page 14 1 undefined on input line 7. LaTeX Warning: Reference `interfacemom__forcing__type_1_1allocate__forcing__typ e' on page 141 undefined on input line 8. LaTeX Warning: Reference `interfacemom__forcing__type_1_1allocate__mech__forcin g' on page 141 undefined on input line 9. LaTeX Warning: Reference `interfacemom__array__transform_1_1allocate__rotated__ array' on page 141 undefined on input line 10. LaTeX Warning: Reference `interfacemom__hor__index_1_1assignment_07_0A_08' on p age 141 undefined on input line 11. LaTeX Warning: Reference `interfacemom__coms_1_1assignment_07_0A_08' on page 14 1 undefined on input line 12. LaTeX Warning: Reference `structmom__tidal__forcing_1_1astro__longitudes' on pa ge 141 undefined on input line 13. LaTeX Warning: Reference `structmom__diag__mediator_1_1axes__grp' on page 141 u ndefined on input line 14. LaTeX Warning: Reference `structmom__barotropic_1_1barotropic__cs' on page 141 undefined on input line 15. LaTeX Warning: Reference `interfacemom__checksums_1_1bchksum' on page 141 undef ined on input line 16. LaTeX Warning: Reference `interfacemom__checksums_1_1bchksum__pair' on page 141 undefined on input line 17. LaTeX Warning: Reference `structbfb__surface__forcing_1_1bfb__surface__forcing_ _cs' on page 141 undefined on input line 18. [141] LaTeX Warning: Reference `structmom__bkgnd__mixing_1_1bkgnd__mixing__cs' on pag e 142 undefined on input line 19. LaTeX Warning: Reference `structboundary__impulse__tracer_1_1boundary__impulse_ _tracer__cs' on page 142 undefined on input line 20. LaTeX Warning: Reference `structmom__variables_1_1bt__cont__type' on page 142 u ndefined on input line 21. LaTeX Warning: Reference `structmom__barotropic_1_1bt__obc__type' on page 142 u ndefined on input line 22. LaTeX Warning: Reference `structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs' on page 142 undefined on input line 23. LaTeX Warning: Reference `interfacemom__eos_1_1calculate__compress' on page 142 undefined on input line 24. LaTeX Warning: Reference `interfacemom__eos_1_1calculate__density' on page 142 undefined on input line 25. LaTeX Warning: Reference `interfacemom__eos_1_1calculate__density__derivs' on p age 142 undefined on input line 26. LaTeX Warning: Reference `interfacemom__eos__linear_1_1calculate__density__deri vs__linear' on page 142 undefined on input line 27. LaTeX Warning: Reference `interfacemom__eos__nemo_1_1calculate__density__derivs __nemo' on page 142 undefined on input line 28. LaTeX Warning: Reference `interfacemom__eos__teos10_1_1calculate__density__deri vs__teos10' on page 142 undefined on input line 29. LaTeX Warning: Reference `interfacemom__eos__wright_1_1calculate__density__deri vs__wright' on page 142 undefined on input line 30. LaTeX Warning: Reference `interfacemom__eos__linear_1_1calculate__density__line ar' on page 142 undefined on input line 31. LaTeX Warning: Reference `interfacemom__eos__nemo_1_1calculate__density__nemo' on page 142 undefined on input line 32. LaTeX Warning: Reference `interfacemom__eos_1_1calculate__density__second__deri vs' on page 142 undefined on input line 33. LaTeX Warning: Reference `interfacemom__eos__linear_1_1calculate__density__seco nd__derivs__linear' on page 142 undefined on input line 34. LaTeX Warning: Reference `interfacemom__eos__teos10_1_1calculate__density__seco nd__derivs__teos10' on page 142 undefined on input line 35. LaTeX Warning: Reference `interfacemom__eos__wright_1_1calculate__density__seco nd__derivs__wright' on page 142 undefined on input line 36. LaTeX Warning: Reference `interfacemom__eos__teos10_1_1calculate__density__teos 10' on page 142 undefined on input line 37. Underfull \vbox (badness 10000) has occurred while \output is active [142] LaTeX Warning: Reference `interfacemom__eos__unesco_1_1calculate__density__unes co' on page 143 undefined on input line 38. LaTeX Warning: Reference `interfacemom__eos__wright_1_1calculate__density__wrig ht' on page 143 undefined on input line 39. LaTeX Warning: Reference `interfacemom__eos_1_1calculate__spec__vol' on page 14 3 undefined on input line 40. LaTeX Warning: Reference `interfacemom__eos__linear_1_1calculate__spec__vol__li near' on page 143 undefined on input line 41. LaTeX Warning: Reference `interfacemom__eos__teos10_1_1calculate__spec__vol__te os10' on page 143 undefined on input line 42. LaTeX Warning: Reference `interfacemom__eos__unesco_1_1calculate__spec__vol__un esco' on page 143 undefined on input line 43. LaTeX Warning: Reference `interfacemom__eos__wright_1_1calculate__spec__vol__wr ight' on page 143 undefined on input line 44. LaTeX Warning: Reference `interfacemom__eos_1_1calculate__specific__vol__derivs ' on page 143 undefined on input line 45. LaTeX Warning: Reference `interfacemom__eos_1_1calculate__tfreeze' on page 143 undefined on input line 46. LaTeX Warning: Reference `interfacemom__tfreeze_1_1calculate__tfreeze__linear' on page 143 undefined on input line 47. LaTeX Warning: Reference `interfacemom__tfreeze_1_1calculate__tfreeze__millero' on page 143 undefined on input line 48. LaTeX Warning: Reference `interfacemom__tfreeze_1_1calculate__tfreeze__teos10' on page 143 undefined on input line 49. LaTeX Warning: Reference `interfacemom__debugging_1_1check__redundant' on page 143 undefined on input line 50. LaTeX Warning: Reference `interfacemom__debugging_1_1check__redundant__b' on pa ge 143 undefined on input line 51. LaTeX Warning: Reference `interfacemom__debugging_1_1check__redundant__c' on pa ge 143 undefined on input line 52. LaTeX Warning: Reference `interfacemom__debugging_1_1check__redundant__t' on pa ge 143 undefined on input line 53. LaTeX Warning: Reference `interfacemom__checksums_1_1chk__sum__msg' on page 143 undefined on input line 54. [143] LaTeX Warning: Reference `interfacemom__checksums_1_1chksum' on page 144 undefi ned on input line 55. LaTeX Warning: Reference `interfacemom__domains_1_1clone__mom__domain' on page 144 undefined on input line 56. LaTeX Warning: Reference `structmom__variables_1_1cont__diag__ptrs' on page 144 undefined on input line 57. LaTeX Warning: Reference `structmom__continuity_1_1continuity__cs' on page 144 undefined on input line 58. LaTeX Warning: Reference `structmom__continuity__ppm_1_1continuity__ppm__cs' on page 144 undefined on input line 59. LaTeX Warning: Reference `interfaceregrid__consts_1_1coordinateunits' on page 1 44 undefined on input line 60. LaTeX Warning: Reference `structmom__coriolisadv_1_1coriolisadv__cs' on page 14 4 undefined on input line 61. LaTeX Warning: Reference `interfacemom__domains_1_1create__group__pass' on page 144 undefined on input line 62. LaTeX Warning: Reference `structmom__controlled__forcing_1_1ctrl__forcing__cs' on page 144 undefined on input line 63. LaTeX Warning: Reference `structmom__cvmix__conv_1_1cvmix__conv__cs' on page 14 4 undefined on input line 64. LaTeX Warning: Reference `structmom__cvmix__ddiff_1_1cvmix__ddiff__cs' on page 144 undefined on input line 65. LaTeX Warning: Reference `structmom__cvmix__shear_1_1cvmix__shear__cs' on page 144 undefined on input line 66. LaTeX Warning: Reference `structmom__sum__output_1_1depth__list' on page 144 un defined on input line 67. LaTeX Warning: Reference `structmom__diabatic__aux_1_1diabatic__aux__cs' on pag e 144 undefined on input line 68. LaTeX Warning: Reference `structmom__diabatic__driver_1_1diabatic__cs' on page 144 undefined on input line 69. LaTeX Warning: Reference `structmom__diag__mediator_1_1diag__ctrl' on page 144 undefined on input line 70. LaTeX Warning: Reference `structmom__diag__mediator_1_1diag__dsamp' on page 144 undefined on input line 71. LaTeX Warning: Reference `structmom__diag__mediator_1_1diag__grid__storage' on page 144 undefined on input line 72. LaTeX Warning: Reference `structmom__diag__mediator_1_1diag__grids__type' on pa ge 144 undefined on input line 73. LaTeX Warning: Reference `structmom__diag__remap_1_1diag__remap__ctrl' on page 144 undefined on input line 74. LaTeX Warning: Reference `structmom__diag__mediator_1_1diag__type' on page 144 undefined on input line 75. LaTeX Warning: Reference `structmom__diag__mediator_1_1diagcs__dsamp' on page 1 44 undefined on input line 76. LaTeX Warning: Reference `structmom__diagnostics_1_1diagnostics__cs' on page 14 4 undefined on input line 77. LaTeX Warning: Reference `structmom__diapyc__energy__req_1_1diapyc__energy__req __cs' on page 144 undefined on input line 78. LaTeX Warning: Reference `structmom__set__diffusivity_1_1diffusivity__diags' on page 144 undefined on input line 79. Underfull \vbox (badness 5908) has occurred while \output is active [144] LaTeX Warning: Reference `structmom__get__input_1_1directories' on page 145 und efined on input line 80. LaTeX Warning: Reference `interfacemom__document_1_1doc__param' on page 145 und efined on input line 81. LaTeX Warning: Reference `structmom__document_1_1doc__type' on page 145 undefin ed on input line 82. LaTeX Warning: Reference `structdome__tracer_1_1dome__tracer__cs' on page 145 u ndefined on input line 83. LaTeX Warning: Reference `interfacemom__diag__mediator_1_1downsample__diag__fie ld' on page 145 undefined on input line 84. LaTeX Warning: Reference `interfacemom__diag__mediator_1_1downsample__field' on page 145 undefined on input line 85. LaTeX Warning: Reference `interfacemom__diag__mediator_1_1downsample__mask' on page 145 undefined on input line 86. LaTeX Warning: Reference `structdumbbell__surface__forcing_1_1dumbbell__surface __forcing__cs' on page 145 undefined on input line 87. LaTeX Warning: Reference `structregional__dyes_1_1dye__tracer__cs' on page 145 undefined on input line 88. LaTeX Warning: Reference `structdyed__channel__initialization_1_1dyed__channel_ _obc__cs' on page 145 undefined on input line 89. LaTeX Warning: Reference `structdyed__obc__tracer_1_1dyed__obc__tracer__cs' on page 145 undefined on input line 90. LaTeX Warning: Reference `structmom__dyn__horgrid_1_1dyn__horgrid__type' on pag e 145 undefined on input line 91. LaTeX Warning: Reference `interfacemom__coms_1_1efp__sum__across__pes' on page 145 undefined on input line 92. LaTeX Warning: Reference `structmom__coms_1_1efp__type' on page 145 undefined o n input line 93. LaTeX Warning: Reference `structmom__energetic__pbl_1_1energetic__pbl__cs' on p age 145 undefined on input line 94. LaTeX Warning: Reference `structmom__entrain__diffusive_1_1entrain__diffusive__ cs' on page 145 undefined on input line 95. LaTeX Warning: Reference `structmom__eos_1_1eos__type' on page 145 undefined on input line 96. LaTeX Warning: Reference `structmom__energetic__pbl_1_1epbl__column__diags' on page 145 undefined on input line 97. LaTeX Warning: Reference `structmom__restart_1_1field__restart' on page 145 und efined on input line 98. LaTeX Warning: Reference `structmom__file__parser_1_1file__data__type' on page 145 undefined on input line 99. LaTeX Warning: Reference `interfacemom__io_1_1file__exists' on page 145 undefin ed on input line 100. LaTeX Warning: Reference `structmom__open__boundary_1_1file__obc__cs' on page 1 45 undefined on input line 101. LaTeX Warning: Reference `interfacemom__horizontal__regridding_1_1fill__boundar ies' on page 145 undefined on input line 102. LaTeX Warning: Reference `interfacemom__domains_1_1fill__symmetric__edges' on p age 145 undefined on input line 103. LaTeX Warning: Reference `interfacemom__interface__heights_1_1find__eta' on pag e 145 undefined on input line 104. LaTeX Warning: Reference `structmom__forcing__type_1_1forcing' on page 145 unde fined on input line 105. [145] LaTeX Warning: Reference `structmom__forcing__type_1_1forcing__diags' on page 1 46 undefined on input line 106. LaTeX Warning: Reference `structocean__da__types__mod_1_1forward__operator__typ e' on page 146 undefined on input line 107. LaTeX Warning: Reference `structg__tracer__utils_1_1g__diag__type' on page 146 undefined on input line 108. LaTeX Warning: Reference `structg__tracer__utils_1_1g__tracer__common' on page 146 undefined on input line 109. LaTeX Warning: Reference `interfaceg__tracer__utils_1_1g__tracer__get__pointer' on page 146 undefined on input line 110. LaTeX Warning: Reference `interfaceg__tracer__utils_1_1g__tracer__get__values' on page 146 undefined on input line 111. LaTeX Warning: Reference `interfaceg__tracer__utils_1_1g__tracer__set__values' on page 146 undefined on input line 112. LaTeX Warning: Reference `structg__tracer__utils_1_1g__tracer__type' on page 14 6 undefined on input line 113. LaTeX Warning: Reference `structmom__geothermal_1_1geothermal__cs' on page 146 undefined on input line 114. LaTeX Warning: Reference `interfacemom__file__parser_1_1get__param' on page 146 undefined on input line 115. LaTeX Warning: Reference `structmom__grid__initialize_1_1gps' on page 146 undef ined on input line 116. LaTeX Warning: Reference `structocean__da__types__mod_1_1grid__type' on page 14 6 undefined on input line 117. LaTeX Warning: Reference `interfacemom__checksums_1_1hchksum' on page 146 undef ined on input line 118. LaTeX Warning: Reference `interfacemom__checksums_1_1hchksum__pair' on page 146 undefined on input line 119. LaTeX Warning: Reference `structmom__hor__index_1_1hor__index__type' on page 14 6 undefined on input line 120. LaTeX Warning: Reference `structmom__hor__visc_1_1hor__visc__cs' on page 146 un defined on input line 121. LaTeX Warning: Reference `interfacemom__horizontal__regridding_1_1horiz__interp __and__extrap__tracer' on page 146 undefined on input line 122. LaTeX Warning: Reference `structcoord__hycom_1_1hycom__cs' on page 146 undefine d on input line 123. LaTeX Warning: Reference `structmom__surface__forcing__gfdl_1_1ice__ocean__boun dary__type' on page 146 undefined on input line 124. LaTeX Warning: Reference `structmom__ice__shelf_1_1ice__shelf__cs' on page 146 undefined on input line 125. LaTeX Warning: Reference `structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__c s' on page 146 undefined on input line 126. LaTeX Warning: Reference `structmom__ice__shelf__state_1_1ice__shelf__state' on page 146 undefined on input line 127. LaTeX Warning: Reference `structideal__age__example_1_1ideal__age__tracer__cs' on page 146 undefined on input line 128. LaTeX Warning: Reference `structidealized__hurricane_1_1idealized__hurricane__c s' on page 146 undefined on input line 129. Underfull \vbox (badness 6708) has occurred while \output is active [146] LaTeX Warning: Reference `interfacemom__ale__sponge_1_1initialize__ale__sponge' on page 147 undefined on input line 130. LaTeX Warning: Reference `structmom__internal__tides_1_1int__tide__cs' on page 147 undefined on input line 131. LaTeX Warning: Reference `structmom__int__tide__input_1_1int__tide__input__cs' on page 147 undefined on input line 132. LaTeX Warning: Reference `structmom__int__tide__input_1_1int__tide__input__type ' on page 147 undefined on input line 133. LaTeX Warning: Reference `structregrid__interp_1_1interp__cs__type' on page 147 undefined on input line 134. LaTeX Warning: Reference `interfacemom__checksums_1_1is__nan' on page 147 undef ined on input line 135. LaTeX Warning: Reference `structisomip__tracer_1_1isomip__tracer__cs' on page 1 47 undefined on input line 136. LaTeX Warning: Reference `structmom__kappa__shear_1_1kappa__shear__cs' on page 147 undefined on input line 137. LaTeX Warning: Reference `structkdtree_1_1kd__root' on page 147 undefined on in put line 138. LaTeX Warning: Reference `structkelvin__initialization_1_1kelvin__obc__cs' on p age 147 undefined on input line 139. LaTeX Warning: Reference `structmom__cvmix__kpp_1_1kpp__cs' on page 147 undefin ed on input line 140. LaTeX Warning: Reference `structmom__lateral__boundary__diffusion_1_1lateral__b oundary__diffusion__cs' on page 147 undefined on input line 141. LaTeX Warning: Reference `structmom__document_1_1link__msg' on page 147 undefin ed on input line 142. LaTeX Warning: Reference `structmom__file__parser_1_1link__parameter' on page 1 47 undefined on input line 143. LaTeX Warning: Reference `structmom__barotropic_1_1local__bt__cont__u__type' on page 147 undefined on input line 144. LaTeX Warning: Reference `structmom__barotropic_1_1local__bt__cont__v__type' on page 147 undefined on input line 145. LaTeX Warning: Reference `interfacemom__file__parser_1_1log__param' on page 147 undefined on input line 146. LaTeX Warning: Reference `interfacemom__file__parser_1_1log__version' on page 1 47 undefined on input line 147. LaTeX Warning: Reference `structmom__ice__shelf__dynamics_1_1loop__bounds__type ' on page 147 undefined on input line 148. LaTeX Warning: Reference `structmom__internal__tides_1_1loop__bounds__type' on page 147 undefined on input line 149. LaTeX Warning: Reference `structmom__continuity__ppm_1_1loop__bounds__type' on page 147 undefined on input line 150. LaTeX Warning: Reference `structmom__marine__ice_1_1marine__ice__cs' on page 14 7 undefined on input line 151. LaTeX Warning: Reference `structmom__forcing__type_1_1mech__forcing' on page 14 7 undefined on input line 152. LaTeX Warning: Reference `structmom__meke_1_1meke__cs' on page 147 undefined on input line 153. LaTeX Warning: Reference `structmom__meke__types_1_1meke__type' on page 147 und efined on input line 154. LaTeX Warning: Reference `structmom__barotropic_1_1memory__size__type' on page 147 undefined on input line 155. [147] LaTeX Warning: Reference `structmeso__surface__forcing_1_1meso__surface__forcin g__cs' on page 148 undefined on input line 156. LaTeX Warning: Reference `structmom__mixed__layer__restrat_1_1mixedlayer__restr at__cs' on page 148 undefined on input line 157. LaTeX Warning: Reference `structmom_1_1mom__control__struct' on page 148 undefi ned on input line 158. LaTeX Warning: Reference `structmom_1_1mom__diag__ids' on page 148 undefined on input line 159. LaTeX Warning: Reference `structmom__domains_1_1mom__domain__type' on page 148 undefined on input line 160. LaTeX Warning: Reference `structmom__dynamics__split__rk2_1_1mom__dyn__split__r k2__cs' on page 148 undefined on input line 161. LaTeX Warning: Reference `structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs ' on page 148 undefined on input line 162. LaTeX Warning: Reference `structmom__dynamics__unsplit__rk2_1_1mom__dyn__unspli t__rk2__cs' on page 148 undefined on input line 163. LaTeX Warning: Reference `structmom__generic__tracer_1_1mom__generic__tracer__c s' on page 148 undefined on input line 164. LaTeX Warning: Reference `interfacemom__io_1_1mom__read__data' on page 148 unde fined on input line 165. LaTeX Warning: Reference `interfacemom__io_1_1mom__read__vector' on page 148 un defined on input line 166. LaTeX Warning: Reference `structmom__restart_1_1mom__restart__cs' on page 148 u ndefined on input line 167. LaTeX Warning: Reference `interfacemom__checksum__packages_1_1mom__state__chksu m' on page 148 undefined on input line 168. LaTeX Warning: Reference `structmom__neutral__diffusion_1_1neutral__diffusion__ cs' on page 148 undefined on input line 169. LaTeX Warning: Reference `structmom__open__boundary_1_1obc__registry__type' on page 148 undefined on input line 170. LaTeX Warning: Reference `structmom__open__boundary_1_1obc__segment__data__type ' on page 148 undefined on input line 171. LaTeX Warning: Reference `structmom__open__boundary_1_1obc__segment__tracer__ty pe' on page 148 undefined on input line 172. LaTeX Warning: Reference `structmom__open__boundary_1_1obc__segment__type' on p age 148 undefined on input line 173. LaTeX Warning: Reference `structmom__open__boundary_1_1obc__struct__type' on pa ge 148 undefined on input line 174. LaTeX Warning: Reference `structmom__restart_1_1obsolete__restart' on page 148 undefined on input line 175. LaTeX Warning: Reference `structocean__da__types__mod_1_1ocean__control__struct ' on page 148 undefined on input line 176. LaTeX Warning: Reference `structmom__grid_1_1ocean__grid__type' on page 148 und efined on input line 177. LaTeX Warning: Reference `structmom__variables_1_1ocean__internal__state' on pa ge 148 undefined on input line 178. LaTeX Warning: Reference `interfaceocean__model__mod_1_1ocean__model__data__get ' on page 148 undefined on input line 179. LaTeX Warning: Reference `structmom__open__boundary_1_1ocean__obc__type' on pag e 148 undefined on input line 180. LaTeX Warning: Reference `structocean__da__types__mod_1_1ocean__profile__type' on page 148 undefined on input line 181. LaTeX Warning: Reference `structocean__model__mod_1_1ocean__public__type' on pa ge 148 undefined on input line 182. [148] LaTeX Warning: Reference `structocean__model__mod_1_1ocean__state__type' on pag e 149 undefined on input line 183. LaTeX Warning: Reference `structmom__ocmip2__cfc_1_1ocmip2__cfc__cs' on page 14 9 undefined on input line 184. LaTeX Warning: Reference `structmom__oda__driver__mod_1_1oda__cs' on page 149 u ndefined on input line 185. LaTeX Warning: Reference `structmom__offline__main_1_1offline__transport__cs' o n page 149 undefined on input line 186. LaTeX Warning: Reference `structoil__tracer_1_1oil__tracer__cs' on page 149 und efined on input line 187. LaTeX Warning: Reference `structmom__opacity_1_1opacity__cs' on page 149 undefi ned on input line 188. LaTeX Warning: Reference `interfacemom__coms_1_1operator_07_09_08' on page 149 undefined on input line 189. LaTeX Warning: Reference `interfacemom__coms_1_1operator_07-_08' on page 149 un defined on input line 190. LaTeX Warning: Reference `structmom__opacity_1_1optics__type' on page 149 undef ined on input line 191. LaTeX Warning: Reference `structmom__restart_1_1p0d' on page 149 undefined on i nput line 192. LaTeX Warning: Reference `structmom__restart_1_1p1d' on page 149 undefined on i nput line 193. LaTeX Warning: Reference `structmom__ale__sponge_1_1p2d' on page 149 undefined on input line 194. LaTeX Warning: Reference `structmom__restart_1_1p2d' on page 149 undefined on i nput line 195. LaTeX Warning: Reference `structmom__variables_1_1p2d' on page 149 undefined on input line 196. LaTeX Warning: Reference `structmom__sponge_1_1p2d' on page 149 undefined on in put line 197. LaTeX Warning: Reference `structmom__tracer__hor__diff_1_1p2d' on page 149 unde fined on input line 198. LaTeX Warning: Reference `structmom__tracer__hor__diff_1_1p2di' on page 149 und efined on input line 199. LaTeX Warning: Reference `structmom__sponge_1_1p3d' on page 149 undefined on in put line 200. LaTeX Warning: Reference `structmom__restart_1_1p3d' on page 149 undefined on i nput line 201. LaTeX Warning: Reference `structmom__ale__sponge_1_1p3d' on page 149 undefined on input line 202. LaTeX Warning: Reference `structmom__variables_1_1p3d' on page 149 undefined on input line 203. LaTeX Warning: Reference `structmom__restart_1_1p4d' on page 149 undefined on i nput line 204. LaTeX Warning: Reference `structmom__file__parser_1_1param__file__type' on page 149 undefined on input line 205. LaTeX Warning: Reference `structmom__file__parser_1_1parameter__block' on page 149 undefined on input line 206. LaTeX Warning: Reference `interfacemom__domains_1_1pass__var' on page 149 undef ined on input line 207. Underfull \vbox (badness 5908) has occurred while \output is active [149] LaTeX Warning: Reference `interfacemom__domains_1_1pass__var__complete' on page 150 undefined on input line 208. LaTeX Warning: Reference `interfacemom__domains_1_1pass__var__start' on page 15 0 undefined on input line 209. LaTeX Warning: Reference `interfacemom__domains_1_1pass__vector' on page 150 un defined on input line 210. LaTeX Warning: Reference `interfacemom__domains_1_1pass__vector__complete' on p age 150 undefined on input line 211. LaTeX Warning: Reference `interfacemom__domains_1_1pass__vector__start' on page 150 undefined on input line 212. LaTeX Warning: Reference `structmom__pointaccel_1_1pointaccel__cs' on page 150 undefined on input line 213. LaTeX Warning: Reference `interfacemom__diag__mediator_1_1post__data' on page 1 50 undefined on input line 214. LaTeX Warning: Reference `structmom__pressureforce_1_1pressureforce__cs' on pag e 150 undefined on input line 215. LaTeX Warning: Reference `structmom__pressureforce__fv_1_1pressureforce__fv__cs ' on page 150 undefined on input line 216. LaTeX Warning: Reference `structmom__pressureforce__mont_1_1pressureforce__mont __cs' on page 150 undefined on input line 217. LaTeX Warning: Reference `structmom__random_1_1prng' on page 150 undefined on i nput line 218. LaTeX Warning: Reference `structpseudo__salt__tracer_1_1pseudo__salt__tracer__c s' on page 150 undefined on input line 219. LaTeX Warning: Reference `structmom__oda__driver__mod_1_1ptr__mpp__domain' on p age 150 undefined on input line 220. LaTeX Warning: Reference `interfacemom__checksums_1_1qchksum' on page 150 undef ined on input line 221. LaTeX Warning: Reference `interfacemom__restart_1_1query__initialized' on page 150 undefined on input line 222. LaTeX Warning: Reference `interfacemom__file__parser_1_1read__param' on page 15 0 undefined on input line 223. LaTeX Warning: Reference `interfacemom__diag__manager__wrapper_1_1register__dia g__field__fms' on page 150 undefined on input line 224. LaTeX Warning: Reference `interfacemom__restart_1_1register__restart__field' on page 150 undefined on input line 225. LaTeX Warning: Reference `interfacemom__restart_1_1register__restart__pair' on page 150 undefined on input line 226. LaTeX Warning: Reference `structmom__regridding_1_1regridding__cs' on page 150 undefined on input line 227. LaTeX Warning: Reference `structmom__regularize__layers_1_1regularize__layers__ cs' on page 150 undefined on input line 228. LaTeX Warning: Reference `structmom__remapping_1_1remapping__cs' on page 150 un defined on input line 229. LaTeX Warning: Reference `interfacemom__coms_1_1reproducing__sum' on page 150 u ndefined on input line 230. LaTeX Warning: Reference `interfacemom__coms_1_1reproducing__sum__efp' on page 150 undefined on input line 231. LaTeX Warning: Reference `structrgc__tracer_1_1rgc__tracer__cs' on page 150 und efined on input line 232. LaTeX Warning: Reference `structcoord__rho_1_1rho__cs' on page 150 undefined on input line 233. Underfull \vbox (badness 5231) has occurred while \output is active [150] LaTeX Warning: Reference `interfacemom__array__transform_1_1rotate__array' on p age 151 undefined on input line 234. LaTeX Warning: Reference `interfacemom__array__transform_1_1rotate__array__pair ' on page 151 undefined on input line 235. LaTeX Warning: Reference `interfacemom__array__transform_1_1rotate__vector' on page 151 undefined on input line 236. LaTeX Warning: Reference `interfacemom__transform__fms_1_1rotated__mpp__chksum' on page 151 undefined on input line 237. LaTeX Warning: Reference `interfacemom__transform__fms_1_1rotated__time__interp __external' on page 151 undefined on input line 238. LaTeX Warning: Reference `interfacemom__transform__fms_1_1rotated__write__field ' on page 151 undefined on input line 239. LaTeX Warning: Reference `interfacemom__safe__alloc_1_1safe__alloc__alloc' on p age 151 undefined on input line 240. LaTeX Warning: Reference `interfacemom__safe__alloc_1_1safe__alloc__ptr' on pag e 151 undefined on input line 241. LaTeX Warning: Reference `structscm__cvmix__tests_1_1scm__cvmix__tests__cs' on page 151 undefined on input line 242. LaTeX Warning: Reference `structmom__open__boundary_1_1segment__tracer__registr y__type' on page 151 undefined on input line 243. LaTeX Warning: Reference `structmom__set__diffusivity_1_1set__diffusivity__cs' on page 151 undefined on input line 244. LaTeX Warning: Reference `interfacemom__ale__sponge_1_1set__up__ale__sponge__fi eld' on page 151 undefined on input line 245. LaTeX Warning: Reference `interfacemom__ale__sponge_1_1set__up__ale__sponge__ve l__field' on page 151 undefined on input line 246. LaTeX Warning: Reference `structmom__set__visc_1_1set__visc__cs' on page 151 un defined on input line 247. LaTeX Warning: Reference `structshelfwave__initialization_1_1shelfwave__obc__cs ' on page 151 undefined on input line 248. LaTeX Warning: Reference `structcoord__sigma_1_1sigma__cs' on page 151 undefine d on input line 249. LaTeX Warning: Reference `structcoord__slight_1_1slight__cs' on page 151 undefi ned on input line 250. LaTeX Warning: Reference `structmom__sponge_1_1sponge__cs' on page 151 undefine d on input line 251. LaTeX Warning: Reference `interfaceregrid__consts_1_1state__dependent' on page 151 undefined on input line 252. LaTeX Warning: Reference `structmom__checksum__packages_1_1stats' on page 151 u ndefined on input line 253. LaTeX Warning: Reference `structmom__sum__output_1_1sum__output__cs' on page 15 1 undefined on input line 254. LaTeX Warning: Reference `structmom__variables_1_1surface' on page 151 undefine d on input line 255. Underfull \vbox (badness 10000) has occurred while \output is active [151] LaTeX Warning: Reference `structmom__diagnostics_1_1surface__diag__ids' on page 152 undefined on input line 256. LaTeX Warning: Reference `structmom__surface__forcing_1_1surface__forcing__cs' on page 152 undefined on input line 257. LaTeX Warning: Reference `structmom__surface__forcing__gfdl_1_1surface__forcing __cs' on page 152 undefined on input line 258. LaTeX Warning: Reference `structmom__variables_1_1thermo__var__ptrs' on page 15 2 undefined on input line 259. LaTeX Warning: Reference `structmom__thickness__diffuse_1_1thickness__diffuse__ cs' on page 152 undefined on input line 260. LaTeX Warning: Reference `structtidal__bay__initialization_1_1tidal__bay__obc__ cs' on page 152 undefined on input line 261. LaTeX Warning: Reference `structmom__tidal__forcing_1_1tidal__forcing__cs' on p age 152 undefined on input line 262. LaTeX Warning: Reference `structmom__tidal__mixing_1_1tidal__mixing__cs' on pag e 152 undefined on input line 263. LaTeX Warning: Reference `structmom__tidal__mixing_1_1tidal__mixing__diags' on page 152 undefined on input line 264. LaTeX Warning: Reference `structmom__tracer__advect_1_1tracer__advect__cs' on p age 152 undefined on input line 265. LaTeX Warning: Reference `structmom__tracer__flow__control_1_1tracer__flow__con trol__cs' on page 152 undefined on input line 266. LaTeX Warning: Reference `structmom__tracer__hor__diff_1_1tracer__hor__diff__cs ' on page 152 undefined on input line 267. LaTeX Warning: Reference `structmom__tracer__registry_1_1tracer__registry__type ' on page 152 undefined on input line 268. LaTeX Warning: Reference `structmom__tracer__registry_1_1tracer__type' on page 152 undefined on input line 269. LaTeX Warning: Reference `structmom__diagnostics_1_1transport__diag__ids' on pa ge 152 undefined on input line 270. LaTeX Warning: Reference `interfacemom__checksums_1_1uchksum' on page 152 undef ined on input line 271. LaTeX Warning: Reference `structmom__unit__scaling_1_1unit__scale__type' on pag e 152 undefined on input line 272. LaTeX Warning: Reference `structmom__boundary__update_1_1update__obc__cs' on pa ge 152 undefined on input line 273. LaTeX Warning: Reference `structuser__change__diffusivity_1_1user__change__diff __cs' on page 152 undefined on input line 274. LaTeX Warning: Reference `structuser__shelf__init_1_1user__ice__shelf__cs' on p age 152 undefined on input line 275. LaTeX Warning: Reference `structuser__revise__forcing_1_1user__revise__forcing_ _cs' on page 152 undefined on input line 276. LaTeX Warning: Reference `structuser__surface__forcing_1_1user__surface__forcin g__cs' on page 152 undefined on input line 277. LaTeX Warning: Reference `structuser__tracer__example_1_1user__tracer__example_ _cs' on page 152 undefined on input line 278. LaTeX Warning: Reference `interfacemom__checksums_1_1uvchksum' on page 152 unde fined on input line 279. Underfull \vbox (badness 6708) has occurred while \output is active [152] LaTeX Warning: Reference `structmom__io_1_1vardesc' on page 153 undefined on in put line 280. LaTeX Warning: Reference `structmom__lateral__mixing__coeffs_1_1varmix__cs' on page 153 undefined on input line 281. LaTeX Warning: Reference `interfacemom__checksums_1_1vchksum' on page 153 undef ined on input line 282. LaTeX Warning: Reference `interfacemom__debugging_1_1vec__chksum' on page 153 u ndefined on input line 283. LaTeX Warning: Reference `interfacemom__debugging_1_1vec__chksum__a' on page 15 3 undefined on input line 284. LaTeX Warning: Reference `interfacemom__debugging_1_1vec__chksum__b' on page 15 3 undefined on input line 285. LaTeX Warning: Reference `interfacemom__debugging_1_1vec__chksum__c' on page 15 3 undefined on input line 286. LaTeX Warning: Reference `structmom__verticalgrid_1_1verticalgrid__type' on pag e 153 undefined on input line 287. LaTeX Warning: Reference `structmom__vert__friction_1_1vertvisc__cs' on page 15 3 undefined on input line 288. LaTeX Warning: Reference `structmom__variables_1_1vertvisc__type' on page 153 u ndefined on input line 289. LaTeX Warning: Reference `structmom__wave__interface_1_1wave__parameters__cs' o n page 153 undefined on input line 290. LaTeX Warning: Reference `structmom__wave__speed_1_1wave__speed__cs' on page 15 3 undefined on input line 291. LaTeX Warning: Reference `structmom__wave__structure_1_1wave__structure__cs' on page 153 undefined on input line 292. LaTeX Warning: Reference `structmom__write__cputime_1_1write__cputime__cs' on p age 153 undefined on input line 293. LaTeX Warning: Reference `structcoord__zlike_1_1zlike__cs' on page 153 undefine d on input line 294. ) [153] [154] Chapter 46. (./files.tex LaTeX Warning: Reference `MOM__surface__forcing__gfdl_8F90' on page 155 undefin ed on input line 3. LaTeX Warning: Reference `ocean__model__MOM_8F90' on page 155 undefined on inpu t line 4. LaTeX Warning: Reference `MOM__memory_8h' on page 155 undefined on input line 5 . LaTeX Warning: Reference `FMS__coupler__util_8F90' on page 155 undefined on inp ut line 6. LaTeX Warning: Reference `generic__tracer_8F90' on page 155 undefined on input line 7. LaTeX Warning: Reference `generic__tracer__utils_8F90' on page 155 undefined on input line 8. LaTeX Warning: Reference `kdtree_8f90' on page 155 undefined on input line 9. LaTeX Warning: Reference `ocean__da__core_8F90' on page 155 undefined on input line 10. LaTeX Warning: Reference `ocean__da__types_8F90' on page 155 undefined on input line 11. LaTeX Warning: Reference `write__ocean__obs_8F90' on page 155 undefined on inpu t line 12. LaTeX Warning: Reference `atmos__ocean__fluxes_8F90' on page 155 undefined on i nput line 13. LaTeX Warning: Reference `MESO__surface__forcing_8F90' on page 155 undefined on input line 14. LaTeX Warning: Reference `MOM__driver_8F90' on page 155 undefined on input line 15. LaTeX Warning: Reference `MOM__surface__forcing_8F90' on page 155 undefined on input line 16. LaTeX Warning: Reference `user__surface__forcing_8F90' on page 155 undefined on input line 17. LaTeX Warning: Reference `coord__adapt_8F90' on page 155 undefined on input lin e 18. LaTeX Warning: Reference `coord__hycom_8F90' on page 155 undefined on input lin e 19. LaTeX Warning: Reference `coord__rho_8F90' on page 155 undefined on input line 20. LaTeX Warning: Reference `coord__sigma_8F90' on page 155 undefined on input lin e 21. LaTeX Warning: Reference `coord__slight_8F90' on page 155 undefined on input li ne 22. LaTeX Warning: Reference `coord__zlike_8F90' on page 155 undefined on input lin e 23. LaTeX Warning: Reference `MOM__ALE_8F90' on page 155 undefined on input line 24 . LaTeX Warning: Reference `MOM__regridding_8F90' on page 155 undefined on input line 25. LaTeX Warning: Reference `MOM__remapping_8F90' on page 155 undefined on input l ine 26. LaTeX Warning: Reference `P1M__functions_8F90' on page 155 undefined on input l ine 27. LaTeX Warning: Reference `P3M__functions_8F90' on page 155 undefined on input l ine 28. LaTeX Warning: Reference `PCM__functions_8F90' on page 155 undefined on input l ine 29. LaTeX Warning: Reference `PLM__functions_8F90' on page 155 undefined on input l ine 30. LaTeX Warning: Reference `polynomial__functions_8F90' on page 155 undefined on input line 31. LaTeX Warning: Reference `PPM__functions_8F90' on page 155 undefined on input l ine 32. LaTeX Warning: Reference `PQM__functions_8F90' on page 155 undefined on input l ine 33. LaTeX Warning: Reference `regrid__consts_8F90' on page 155 undefined on input l ine 34. LaTeX Warning: Reference `regrid__edge__values_8F90' on page 155 undefined on i nput line 35. LaTeX Warning: Reference `regrid__interp_8F90' on page 155 undefined on input l ine 36. [155] LaTeX Warning: Reference `regrid__solvers_8F90' on page 156 undefined on input line 37. LaTeX Warning: Reference `MOM_8F90' on page 156 undefined on input line 38. LaTeX Warning: Reference `MOM__barotropic_8F90' on page 156 undefined on input line 39. LaTeX Warning: Reference `MOM__boundary__update_8F90' on page 156 undefined on input line 40. LaTeX Warning: Reference `MOM__checksum__packages_8F90' on page 156 undefined o n input line 41. LaTeX Warning: Reference `MOM__continuity_8F90' on page 156 undefined on input line 42. LaTeX Warning: Reference `MOM__continuity__PPM_8F90' on page 156 undefined on i nput line 43. LaTeX Warning: Reference `MOM__CoriolisAdv_8F90' on page 156 undefined on input line 44. LaTeX Warning: Reference `MOM__density__integrals_8F90' on page 156 undefined o n input line 45. LaTeX Warning: Reference `MOM__dynamics__split__RK2_8F90' on page 156 undefined on input line 46. LaTeX Warning: Reference `MOM__dynamics__unsplit_8F90' on page 156 undefined on input line 47. LaTeX Warning: Reference `MOM__dynamics__unsplit__RK2_8F90' on page 156 undefin ed on input line 48. LaTeX Warning: Reference `MOM__forcing__type_8F90' on page 156 undefined on inp ut line 49. LaTeX Warning: Reference `MOM__grid_8F90' on page 156 undefined on input line 5 0. LaTeX Warning: Reference `MOM__interface__heights_8F90' on page 156 undefined o n input line 51. LaTeX Warning: Reference `MOM__isopycnal__slopes_8F90' on page 156 undefined on input line 52. LaTeX Warning: Reference `MOM__open__boundary_8F90' on page 156 undefined on in put line 53. LaTeX Warning: Reference `MOM__PressureForce_8F90' on page 156 undefined on inp ut line 54. LaTeX Warning: Reference `MOM__PressureForce__FV_8F90' on page 156 undefined on input line 55. LaTeX Warning: Reference `MOM__PressureForce__Montgomery_8F90' on page 156 unde fined on input line 56. LaTeX Warning: Reference `MOM__transcribe__grid_8F90' on page 156 undefined on input line 57. LaTeX Warning: Reference `MOM__unit__tests_8F90' on page 156 undefined on input line 58. LaTeX Warning: Reference `MOM__variables_8F90' on page 156 undefined on input l ine 59. LaTeX Warning: Reference `MOM__verticalGrid_8F90' on page 156 undefined on inpu t line 60. LaTeX Warning: Reference `MOM__debugging_8F90' on page 156 undefined on input l ine 61. LaTeX Warning: Reference `MOM__diagnostics_8F90' on page 156 undefined on input line 62. LaTeX Warning: Reference `MOM__obsolete__diagnostics_8F90' on page 156 undefine d on input line 63. LaTeX Warning: Reference `MOM__obsolete__params_8F90' on page 156 undefined on input line 64. LaTeX Warning: Reference `MOM__PointAccel_8F90' on page 156 undefined on input line 65. LaTeX Warning: Reference `MOM__sum__output_8F90' on page 156 undefined on input line 66. LaTeX Warning: Reference `MOM__wave__speed_8F90' on page 156 undefined on input line 67. LaTeX Warning: Reference `MOM__wave__structure_8F90' on page 156 undefined on i nput line 68. LaTeX Warning: Reference `MOM__EOS_8F90' on page 156 undefined on input line 69 . LaTeX Warning: Reference `MOM__EOS__linear_8F90' on page 156 undefined on input line 70. LaTeX Warning: Reference `MOM__EOS__NEMO_8F90' on page 156 undefined on input l ine 71. LaTeX Warning: Reference `MOM__EOS__TEOS10_8F90' on page 156 undefined on input line 72. LaTeX Warning: Reference `MOM__EOS__UNESCO_8F90' on page 156 undefined on input line 73. LaTeX Warning: Reference `MOM__EOS__Wright_8F90' on page 156 undefined on input line 74. LaTeX Warning: Reference `MOM__TFreeze_8F90' on page 156 undefined on input lin e 75. LaTeX Warning: Reference `MOM__array__transform_8F90' on page 156 undefined on input line 76. LaTeX Warning: Reference `MOM__checksums_8F90' on page 156 undefined on input l ine 77. LaTeX Warning: Reference `MOM__coms_8F90' on page 156 undefined on input line 7 8. LaTeX Warning: Reference `MOM__constants_8F90' on page 156 undefined on input l ine 79. LaTeX Warning: Reference `MOM__cpu__clock_8F90' on page 156 undefined on input line 80. LaTeX Warning: Reference `MOM__diag__manager__wrapper_8F90' on page 156 undefin ed on input line 81. LaTeX Warning: Reference `MOM__diag__mediator_8F90' on page 156 undefined on in put line 82. LaTeX Warning: Reference `MOM__diag__remap_8F90' on page 156 undefined on input line 83. LaTeX Warning: Reference `MOM__diag__vkernels_8F90' on page 156 undefined on in put line 84. LaTeX Warning: Reference `MOM__document_8F90' on page 156 undefined on input li ne 85. LaTeX Warning: Reference `MOM__domains_8F90' on page 156 undefined on input lin e 86. LaTeX Warning: Reference `MOM__dyn__horgrid_8F90' on page 156 undefined on inpu t line 87. [156] LaTeX Warning: Reference `MOM__error__handler_8F90' on page 157 undefined on in put line 88. LaTeX Warning: Reference `MOM__file__parser_8F90' on page 157 undefined on inpu t line 89. LaTeX Warning: Reference `MOM__get__input_8F90' on page 157 undefined on input line 90. LaTeX Warning: Reference `MOM__hor__index_8F90' on page 157 undefined on input line 91. LaTeX Warning: Reference `MOM__horizontal__regridding_8F90' on page 157 undefin ed on input line 92. LaTeX Warning: Reference `MOM__intrinsic__functions_8F90' on page 157 undefined on input line 93. LaTeX Warning: Reference `MOM__io_8F90' on page 157 undefined on input line 94. LaTeX Warning: Reference `MOM__memory__macros_8h' on page 157 undefined on inpu t line 95. LaTeX Warning: Reference `MOM__random_8F90' on page 157 undefined on input line 96. LaTeX Warning: Reference `MOM__restart_8F90' on page 157 undefined on input lin e 97. LaTeX Warning: Reference `MOM__safe__alloc_8F90' on page 157 undefined on input line 98. LaTeX Warning: Reference `MOM__spatial__means_8F90' on page 157 undefined on in put line 99. LaTeX Warning: Reference `MOM__string__functions_8F90' on page 157 undefined on input line 100. LaTeX Warning: Reference `MOM__time__manager_8F90' on page 157 undefined on inp ut line 101. LaTeX Warning: Reference `MOM__transform__FMS_8F90' on page 157 undefined on in put line 102. LaTeX Warning: Reference `MOM__unit__scaling_8F90' on page 157 undefined on inp ut line 103. LaTeX Warning: Reference `MOM__write__cputime_8F90' on page 157 undefined on in put line 104. LaTeX Warning: Reference `version__variable_8h' on page 157 undefined on input line 105. LaTeX Warning: Reference `MOM__ice__shelf_8F90' on page 157 undefined on input line 106. LaTeX Warning: Reference `MOM__ice__shelf__dynamics_8F90' on page 157 undefined on input line 107. LaTeX Warning: Reference `MOM__ice__shelf__initialize_8F90' on page 157 undefin ed on input line 108. LaTeX Warning: Reference `MOM__ice__shelf__state_8F90' on page 157 undefined on input line 109. LaTeX Warning: Reference `MOM__marine__ice_8F90' on page 157 undefined on input line 110. LaTeX Warning: Reference `user__shelf__init_8F90' on page 157 undefined on inpu t line 111. LaTeX Warning: Reference `MOM__coord__initialization_8F90' on page 157 undefine d on input line 112. LaTeX Warning: Reference `MOM__fixed__initialization_8F90' on page 157 undefine d on input line 113. LaTeX Warning: Reference `MOM__grid__initialize_8F90' on page 157 undefined on input line 114. LaTeX Warning: Reference `MOM__shared__initialization_8F90' on page 157 undefin ed on input line 115. LaTeX Warning: Reference `MOM__state__initialization_8F90' on page 157 undefine d on input line 116. LaTeX Warning: Reference `MOM__tracer__initialization__from__Z_8F90' on page 15 7 undefined on input line 117. LaTeX Warning: Reference `MOM__oda__driver_8F90' on page 157 undefined on input line 118. LaTeX Warning: Reference `MOM__hor__visc_8F90' on page 157 undefined on input l ine 119. LaTeX Warning: Reference `MOM__internal__tides_8F90' on page 157 undefined on i nput line 120. LaTeX Warning: Reference `MOM__lateral__mixing__coeffs_8F90' on page 157 undefi ned on input line 121. LaTeX Warning: Reference `MOM__MEKE_8F90' on page 157 undefined on input line 1 22. LaTeX Warning: Reference `MOM__MEKE__types_8F90' on page 157 undefined on input line 123. LaTeX Warning: Reference `MOM__mixed__layer__restrat_8F90' on page 157 undefine d on input line 124. LaTeX Warning: Reference `MOM__thickness__diffuse_8F90' on page 157 undefined o n input line 125. LaTeX Warning: Reference `MOM__tidal__forcing_8F90' on page 157 undefined on in put line 126. LaTeX Warning: Reference `MOM__ALE__sponge_8F90' on page 157 undefined on input line 127. LaTeX Warning: Reference `MOM__bkgnd__mixing_8F90' on page 157 undefined on inp ut line 128. LaTeX Warning: Reference `MOM__bulk__mixed__layer_8F90' on page 157 undefined o n input line 129. LaTeX Warning: Reference `MOM__CVMix__conv_8F90' on page 157 undefined on input line 130. LaTeX Warning: Reference `MOM__CVMix__ddiff_8F90' on page 157 undefined on inpu t line 131. LaTeX Warning: Reference `MOM__CVMix__KPP_8F90' on page 157 undefined on input line 132. LaTeX Warning: Reference `MOM__CVMix__shear_8F90' on page 157 undefined on inpu t line 133. LaTeX Warning: Reference `MOM__diabatic__aux_8F90' on page 157 undefined on inp ut line 134. LaTeX Warning: Reference `MOM__diabatic__driver_8F90' on page 157 undefined on input line 135. LaTeX Warning: Reference `MOM__diapyc__energy__req_8F90' on page 157 undefined on input line 136. LaTeX Warning: Reference `MOM__energetic__PBL_8F90' on page 157 undefined on in put line 137. LaTeX Warning: Reference `MOM__entrain__diffusive_8F90' on page 157 undefined o n input line 138. LaTeX Warning: Reference `MOM__full__convection_8F90' on page 157 undefined on input line 139. LaTeX Warning: Reference `MOM__geothermal_8F90' on page 157 undefined on input line 140. [157] LaTeX Warning: Reference `MOM__internal__tide__input_8F90' on page 158 undefine d on input line 141. LaTeX Warning: Reference `MOM__kappa__shear_8F90' on page 158 undefined on inpu t line 142. LaTeX Warning: Reference `MOM__opacity_8F90' on page 158 undefined on input lin e 143. LaTeX Warning: Reference `MOM__regularize__layers_8F90' on page 158 undefined o n input line 144. LaTeX Warning: Reference `MOM__set__diffusivity_8F90' on page 158 undefined on input line 145. LaTeX Warning: Reference `MOM__set__viscosity_8F90' on page 158 undefined on in put line 146. LaTeX Warning: Reference `MOM__sponge_8F90' on page 158 undefined on input line 147. LaTeX Warning: Reference `MOM__tidal__mixing_8F90' on page 158 undefined on inp ut line 148. LaTeX Warning: Reference `MOM__vert__friction_8F90' on page 158 undefined on in put line 149. LaTeX Warning: Reference `advection__test__tracer_8F90' on page 158 undefined o n input line 150. LaTeX Warning: Reference `boundary__impulse__tracer_8F90' on page 158 undefined on input line 151. LaTeX Warning: Reference `DOME__tracer_8F90' on page 158 undefined on input lin e 152. LaTeX Warning: Reference `dye__example_8F90' on page 158 undefined on input lin e 153. LaTeX Warning: Reference `dyed__obc__tracer_8F90' on page 158 undefined on inpu t line 154. LaTeX Warning: Reference `ideal__age__example_8F90' on page 158 undefined on in put line 155. LaTeX Warning: Reference `ISOMIP__tracer_8F90' on page 158 undefined on input l ine 156. LaTeX Warning: Reference `MOM__generic__tracer_8F90' on page 158 undefined on i nput line 157. LaTeX Warning: Reference `MOM__lateral__boundary__diffusion_8F90' on page 158 u ndefined on input line 158. LaTeX Warning: Reference `MOM__neutral__diffusion_8F90' on page 158 undefined o n input line 159. LaTeX Warning: Reference `MOM__OCMIP2__CFC_8F90' on page 158 undefined on input line 160. LaTeX Warning: Reference `MOM__offline__aux_8F90' on page 158 undefined on inpu t line 161. LaTeX Warning: Reference `MOM__offline__main_8F90' on page 158 undefined on inp ut line 162. LaTeX Warning: Reference `MOM__tracer__advect_8F90' on page 158 undefined on in put line 163. LaTeX Warning: Reference `MOM__tracer__diabatic_8F90' on page 158 undefined on input line 164. LaTeX Warning: Reference `MOM__tracer__flow__control_8F90' on page 158 undefine d on input line 165. LaTeX Warning: Reference `MOM__tracer__hor__diff_8F90' on page 158 undefined on input line 166. LaTeX Warning: Reference `MOM__tracer__registry_8F90' on page 158 undefined on input line 167. LaTeX Warning: Reference `MOM__tracer__Z__init_8F90' on page 158 undefined on i nput line 168. LaTeX Warning: Reference `oil__tracer_8F90' on page 158 undefined on input line 169. LaTeX Warning: Reference `pseudo__salt__tracer_8F90' on page 158 undefined on i nput line 170. LaTeX Warning: Reference `RGC__tracer_8F90' on page 158 undefined on input line 171. LaTeX Warning: Reference `tracer__example_8F90' on page 158 undefined on input line 172. LaTeX Warning: Reference `adjustment__initialization_8F90' on page 158 undefine d on input line 173. LaTeX Warning: Reference `baroclinic__zone__initialization_8F90' on page 158 un defined on input line 174. LaTeX Warning: Reference `basin__builder_8F90' on page 158 undefined on input l ine 175. LaTeX Warning: Reference `benchmark__initialization_8F90' on page 158 undefined on input line 176. LaTeX Warning: Reference `BFB__initialization_8F90' on page 158 undefined on in put line 177. LaTeX Warning: Reference `BFB__surface__forcing_8F90' on page 158 undefined on input line 178. LaTeX Warning: Reference `circle__obcs__initialization_8F90' on page 158 undefi ned on input line 179. LaTeX Warning: Reference `dense__water__initialization_8F90' on page 158 undefi ned on input line 180. LaTeX Warning: Reference `DOME2d__initialization_8F90' on page 158 undefined on input line 181. LaTeX Warning: Reference `DOME__initialization_8F90' on page 158 undefined on i nput line 182. LaTeX Warning: Reference `dumbbell__initialization_8F90' on page 158 undefined on input line 183. LaTeX Warning: Reference `dumbbell__surface__forcing_8F90' on page 158 undefine d on input line 184. LaTeX Warning: Reference `dyed__channel__initialization_8F90' on page 158 undef ined on input line 185. LaTeX Warning: Reference `dyed__obcs__initialization_8F90' on page 158 undefine d on input line 186. LaTeX Warning: Reference `external__gwave__initialization_8F90' on page 158 und efined on input line 187. LaTeX Warning: Reference `Idealized__Hurricane_8F90' on page 158 undefined on i nput line 188. LaTeX Warning: Reference `ISOMIP__initialization_8F90' on page 158 undefined on input line 189. LaTeX Warning: Reference `Kelvin__initialization_8F90' on page 158 undefined on input line 190. LaTeX Warning: Reference `lock__exchange__initialization_8F90' on page 158 unde fined on input line 191. LaTeX Warning: Reference `MOM__controlled__forcing_8F90' on page 158 undefined on input line 192. LaTeX Warning: Reference `MOM__wave__interface_8F90' on page 158 undefined on i nput line 193. LaTeX Warning: Reference `Neverworld__initialization_8F90' on page 158 undefine d on input line 194. [158] LaTeX Warning: Reference `Phillips__initialization_8F90' on page 159 undefined on input line 195. LaTeX Warning: Reference `RGC__initialization_8F90' on page 159 undefined on in put line 196. LaTeX Warning: Reference `Rossby__front__2d__initialization_8F90' on page 159 u ndefined on input line 197. LaTeX Warning: Reference `SCM__CVMix__tests_8F90' on page 159 undefined on inpu t line 198. LaTeX Warning: Reference `seamount__initialization_8F90' on page 159 undefined on input line 199. LaTeX Warning: Reference `shelfwave__initialization_8F90' on page 159 undefined on input line 200. LaTeX Warning: Reference `sloshing__initialization_8F90' on page 159 undefined on input line 201. LaTeX Warning: Reference `soliton__initialization_8F90' on page 159 undefined o n input line 202. LaTeX Warning: Reference `supercritical__initialization_8F90' on page 159 undef ined on input line 203. LaTeX Warning: Reference `tidal__bay__initialization_8F90' on page 159 undefine d on input line 204. LaTeX Warning: Reference `user__change__diffusivity_8F90' on page 159 undefined on input line 205. LaTeX Warning: Reference `user__initialization_8F90' on page 159 undefined on i nput line 206. LaTeX Warning: Reference `user__revise__forcing_8F90' on page 159 undefined on input line 207. ) [159] [160] Chapter 47. (./namespaceadjustment__initialization.tex [161] [162] Package longtable Warning: Column widths have changed (longtable) in table 47.1 on input line 50. [163] Package longtable Warning: Column widths have changed (longtable) in table 47.2 on input line 188. [164] [165] Underfull \vbox (badness 10000) has occurred while \output is active [166]) (./namespaceadvection__test__tracer.tex [167] Package longtable Warning: Column widths have changed (longtable) in table 47.3 on input line 63. Underfull \hbox (badness 10000) detected at line 64 [][][] [168] Package longtable Warning: Column widths have changed (longtable) in table 47.4 on input line 152. [169] [170] Package longtable Warning: Column widths have changed (longtable) in table 47.5 on input line 228. Package longtable Warning: Column widths have changed (longtable) in table 47.6 on input line 264. [171] Package longtable Warning: Column widths have changed (longtable) in table 47.7 on input line 329. [172] Underfull \vbox (badness 10000) has occurred while \output is active [173] Package longtable Warning: Column widths have changed (longtable) in table 47.8 on input line 447. [174]) (./namespaceatmos__ocean__fluxes__mod.tex [175] Package longtable Warning: Column widths have changed (longtable) in table 47.9 on input line 50. [176]) (./namespacebaroclinic__zone__initialization.tex [177] Package longtable Warning: Column widths have changed (longtable) in table 47.10 on input line 53. [178] Package longtable Warning: Column widths have changed (longtable) in table 47.11 on input line 157. [179]) (./namespacebasin__builder.tex [180] [181] Package longtable Warning: Column widths have changed (longtable) in table 47.12 on input line 62. [182] [183] Package longtable Warning: Column widths have changed (longtable) in table 47.13 on input line 213. Package longtable Warning: Column widths have changed (longtable) in table 47.14 on input line 260. Underfull \vbox (badness 10000) has occurred while \output is active [184] Package longtable Warning: Column widths have changed (longtable) in table 47.15 on input line 302. [185] Package longtable Warning: Column widths have changed (longtable) in table 47.16 on input line 343. Package longtable Warning: Column widths have changed (longtable) in table 47.17 on input line 384. Overfull \vbox (26.22467pt too high) has occurred while \output is active [186] Package longtable Warning: Column widths have changed (longtable) in table 47.18 on input line 425. [187] Package longtable Warning: Column widths have changed (longtable) in table 47.19 on input line 467. Package longtable Warning: Column widths have changed (longtable) in table 47.20 on input line 512. [188] Package longtable Warning: Column widths have changed (longtable) in table 47.21 on input line 557. [189] Package longtable Warning: Column widths have changed (longtable) in table 47.22 on input line 602. [190] Package longtable Warning: Column widths have changed (longtable) in table 47.23 on input line 639. ) (./namespacebenchmark__initialization.tex [191] Package longtable Warning: Column widths have changed (longtable) in table 47.24 on input line 48. [192] Package longtable Warning: Column widths have changed (longtable) in table 47.25 on input line 155. [193] [194] [195] [196] Package longtable Warning: Column widths have changed (longtable) in table 47.26 on input line 311. ) (./namespacebfb__initialization.tex [197] Package longtable Warning: Column widths have changed (longtable) in table 47.27 on input line 51. Overfull \vbox (6.91788pt too high) has occurred while \output is active [198] [199] Package longtable Warning: Column widths have changed (longtable) in table 47.28 on input line 174. [200] Package longtable Warning: Column widths have changed (longtable) in table 47.29 on input line 232. [201]) (./namespacebfb__surface__forcing.tex [202] Package longtable Warning: Column widths have changed (longtable) in table 47.30 on input line 47. [203] [204] Package longtable Warning: Column widths have changed (longtable) in table 47.31 on input line 200. [205]) (./namespaceboundary__impulse__tracer.tex [206] [207] Package longtable Warning: Column widths have changed (longtable) in table 47.32 on input line 74. Underfull \hbox (badness 10000) detected at line 75 [][][] [208] Package longtable Warning: Column widths have changed (longtable) in table 47.33 on input line 175. [209] [210] Package longtable Warning: Column widths have changed (longtable) in table 47.34 on input line 271. Package longtable Warning: Column widths have changed (longtable) in table 47.35 on input line 307. [211] Package longtable Warning: Column widths have changed (longtable) in table 47.36 on input line 374. [212] Package longtable Warning: Column widths have changed (longtable) in table 47.37 on input line 458. Overfull \vbox (16.42203pt too high) has occurred while \output is active [213] [214]) (./namespacecircle__obcs__initialization.tex Package longtable Warning: Column widths have changed (longtable) in table 47.38 on input line 36. [215] Underfull \vbox (badness 10000) has occurred while \output is active [216]) (./namespacecoord__adapt.tex [217] Package longtable Warning: Column widths have changed (longtable) in table 47.39 on input line 57. [218] Underfull \vbox (badness 10000) has occurred while \output is active [219] Package longtable Warning: Column widths have changed (longtable) in table 47.40 on input line 256. [220] Package longtable Warning: Column widths have changed (longtable) in table 47.41 on input line 292. [221] Package longtable Warning: Column widths have changed (longtable) in table 47.42 on input line 350. ) (./namespacecoord__hycom.tex [222] Package longtable Warning: Column widths have changed (longtable) in table 47.43 on input line 63. Overfull \vbox (63.99036pt too high) has occurred while \output is active [223] [224] Package longtable Warning: Column widths have changed (longtable) in table 47.44 on input line 154. Package longtable Warning: Column widths have changed (longtable) in table 47.45 on input line 193. [225] Package longtable Warning: Column widths have changed (longtable) in table 47.46 on input line 237. ) (./namespacecoord__rho.tex [226] [227] Package longtable Warning: Column widths have changed (longtable) in table 47.47 on input line 69. [228] [229] Package longtable Warning: Column widths have changed (longtable) in table 47.48 on input line 203. [230] Underfull \vbox (badness 10000) has occurred while \output is active [231] Package longtable Warning: Column widths have changed (longtable) in table 47.49 on input line 356. [232] Package longtable Warning: Column widths have changed (longtable) in table 47.50 on input line 421. [233] Package longtable Warning: Column widths have changed (longtable) in table 47.51 on input line 457. Package longtable Warning: Column widths have changed (longtable) in table 47.52 on input line 498. Overfull \vbox (8.41132pt too high) has occurred while \output is active [234] [235] Package longtable Warning: Column widths have changed (longtable) in table 47.53 on input line 581. ) (./namespacecoord__sigma.tex [236] Package longtable Warning: Column widths have changed (longtable) in table 47.54 on input line 45. [237] Package longtable Warning: Column widths have changed (longtable) in table 47.55 on input line 86. Package longtable Warning: Column widths have changed (longtable) in table 47.56 on input line 118. [238] Package longtable Warning: Column widths have changed (longtable) in table 47.57 on input line 152. ) (./namespacecoord__slight.tex Underfull \hbox (badness 5316) in paragraph at lines 18--19 []\T1/phv/m/n/10 subroutine, pub-lic [][]set[]_[]slight[]_[]params[][] (CS, max []_[]interface[]_[]depths, max[]_[]layer[]_[]thickness, min[]_[]thickness, Underfull \hbox (badness 940) in paragraph at lines 18--19 \T1/phv/m/n/10 compressibility[]_[]fraction, dz[]_[]ml[]_[]min, nz[]_[]fixed[]_ []surface, Rho[]_[][]M[]L[]_[]avg[]_[]depth, nlay[]_[][]M[]L[]_[]offset, fix[]_ []haloclines, [239] Package longtable Warning: Column widths have changed (longtable) in table 47.58 on input line 67. [240] Underfull \vbox (badness 10000) has occurred while \output is active [241] Underfull \vbox (badness 10000) has occurred while \output is active [242] Underfull \vbox (badness 10000) has occurred while \output is active [243] Package longtable Warning: Column widths have changed (longtable) in table 47.59 on input line 392. [244] Package longtable Warning: Column widths have changed (longtable) in table 47.60 on input line 430. [245] Package longtable Warning: Column widths have changed (longtable) in table 47.61 on input line 500. [246] Underfull \vbox (badness 10000) has occurred while \output is active [247] Underfull \vbox (badness 10000) has occurred while \output is active [248] [249] Package longtable Warning: Column widths have changed (longtable) in table 47.62 on input line 790. [250]) (./namespacecoord__zlike.tex [251] Package longtable Warning: Column widths have changed (longtable) in table 47.63 on input line 51. [252] [253] Package longtable Warning: Column widths have changed (longtable) in table 47.64 on input line 154. Package longtable Warning: Column widths have changed (longtable) in table 47.65 on input line 186. [254] Package longtable Warning: Column widths have changed (longtable) in table 47.66 on input line 220. ) (./namespacedense__water__initialization.tex [255] Package longtable Warning: Column widths have changed (longtable) in table 47.67 on input line 69. [256] Underfull \vbox (badness 10000) has occurred while \output is active [257] Package longtable Warning: Column widths have changed (longtable) in table 47.68 on input line 230. Underfull \vbox (badness 10000) has occurred while \output is active [258] [259] Package longtable Warning: Column widths have changed (longtable) in table 47.69 on input line 325. [260]) (./namespacedome2d__initialization.tex [261] Package longtable Warning: Column widths have changed (longtable) in table 47.70 on input line 54. [262] Underfull \vbox (badness 10000) has occurred while \output is active [263] Package longtable Warning: Column widths have changed (longtable) in table 47.71 on input line 251. [264] Underfull \vbox (badness 10000) has occurred while \output is active [265] Package longtable Warning: Column widths have changed (longtable) in table 47.72 on input line 410. Overfull \vbox (16.8857pt too high) has occurred while \output is active [266] [267] Package longtable Warning: Column widths have changed (longtable) in table 47.73 on input line 565. Overfull \vbox (11.34378pt too high) has occurred while \output is active [268]) (./namespacedome__initialization.tex [269] Overfull \hbox (19.48335pt too wide) in alignment at lines 44--44 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.74 on input line 44. [270] [271] Package longtable Warning: Column widths have changed (longtable) in table 47.75 on input line 167. [272] Package longtable Warning: Column widths have changed (longtable) in table 47.76 on input line 246. [273] Package longtable Warning: Column widths have changed (longtable) in table 47.77 on input line 324. [274] Underfull \vbox (badness 10000) has occurred while \output is active [275]) (./namespacedome__tracer.tex [276] [277] Package longtable Warning: Column widths have changed (longtable) in table 47.78 on input line 77. [278] Package longtable Warning: Column widths have changed (longtable) in table 47.79 on input line 148. [279] Package longtable Warning: Column widths have changed (longtable) in table 47.80 on input line 184. [280] Package longtable Warning: Column widths have changed (longtable) in table 47.81 on input line 253. [281] Underfull \vbox (badness 10000) has occurred while \output is active [282] Package longtable Warning: Column widths have changed (longtable) in table 47.82 on input line 423. [283]) (./namespacedumbbell__initialization.tex [284] Package longtable Warning: Column widths have changed (longtable) in table 47.83 on input line 54. Underfull \vbox (badness 10000) has occurred while \output is active [285] [286] Package longtable Warning: Column widths have changed (longtable) in table 47.84 on input line 200. Underfull \vbox (badness 10000) has occurred while \output is active [287] [288] Package longtable Warning: Column widths have changed (longtable) in table 47.85 on input line 304. [289] [290] Package longtable Warning: Column widths have changed (longtable) in table 47.86 on input line 446. ) (./namespacedumbbell__surface__forcing.tex [291] Package longtable Warning: Column widths have changed (longtable) in table 47.87 on input line 49. Overfull \vbox (36.78252pt too high) has occurred while \output is active [292] [293] Package longtable Warning: Column widths have changed (longtable) in table 47.88 on input line 160. [294] Package longtable Warning: Column widths have changed (longtable) in table 47.89 on input line 230. [295]) (./namespacedyed__channel__initialization.tex [296] Package longtable Warning: Column widths have changed (longtable) in table 47.90 on input line 46. [297] Package longtable Warning: Column widths have changed (longtable) in table 47.91 on input line 81. [298] Overfull \hbox (16.48654pt too wide) in alignment at lines 157--157 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.92 on input line 157. [299] Package longtable Warning: Column widths have changed (longtable) in table 47.93 on input line 239. [300]) (./namespacedyed__obc__tracer.tex [301] Package longtable Warning: Column widths have changed (longtable) in table 47.94 on input line 69. [302] [303] [304] Package longtable Warning: Column widths have changed (longtable) in table 47.95 on input line 141. Package longtable Warning: Column widths have changed (longtable) in table 47.96 on input line 186. [305] [306] Package longtable Warning: Column widths have changed (longtable) in table 47.97 on input line 280. [307]) (./namespacedyed__obcs__initialization.tex [308] Package longtable Warning: Column widths have changed (longtable) in table 47.98 on input line 43. [309]) (./namespaceexternal__gwave__initialization.tex [310] Package longtable Warning: Column widths have changed (longtable) in table 47.99 on input line 38. ) (./namespaceg__tracer__utils.tex [311] [312] Package longtable Warning: Column widths have changed (longtable) in table 47.100 on input line 91. [313] Package longtable Warning: Column widths have changed (longtable) in table 47.101 on input line 120. Package longtable Warning: Column widths have changed (longtable) in table 47.102 on input line 156. Overfull \vbox (37.85315pt too high) has occurred while \output is active [314] Package longtable Warning: Column widths have changed (longtable) in table 47.103 on input line 190. [315] Package longtable Warning: Column widths have changed (longtable) in table 47.104 on input line 230. Package longtable Warning: Column widths have changed (longtable) in table 47.105 on input line 268. [316] Package longtable Warning: Column widths have changed (longtable) in table 47.106 on input line 304. Package longtable Warning: Column widths have changed (longtable) in table 47.107 on input line 334. [317] Package longtable Warning: Column widths have changed (longtable) in table 47.108 on input line 384. [318] Package longtable Warning: Column widths have changed (longtable) in table 47.109 on input line 424. Package longtable Warning: Column widths have changed (longtable) in table 47.110 on input line 450. [319] Package longtable Warning: Column widths have changed (longtable) in table 47.111 on input line 480. Package longtable Warning: Column widths have changed (longtable) in table 47.112 on input line 512. [320] Package longtable Warning: Column widths have changed (longtable) in table 47.113 on input line 538. Package longtable Warning: Column widths have changed (longtable) in table 47.114 on input line 562. [321] Package longtable Warning: Column widths have changed (longtable) in table 47.115 on input line 600. [322] Package longtable Warning: Column widths have changed (longtable) in table 47.116 on input line 641. Package longtable Warning: Column widths have changed (longtable) in table 47.117 on input line 680. [323] Package longtable Warning: Column widths have changed (longtable) in table 47.118 on input line 730. [324] Package longtable Warning: Column widths have changed (longtable) in table 47.119 on input line 766. Package longtable Warning: Column widths have changed (longtable) in table 47.120 on input line 795. [325] Package longtable Warning: Column widths have changed (longtable) in table 47.121 on input line 839. ) (./namespacegeneric__tracer.tex [326] [327] Package longtable Warning: Column widths have changed (longtable) in table 47.122 on input line 63. Package longtable Warning: Column widths have changed (longtable) in table 47.123 on input line 88. [328] Package longtable Warning: Column widths have changed (longtable) in table 47.124 on input line 129. Package longtable Warning: Column widths have changed (longtable) in table 47.125 on input line 163. [329] Package longtable Warning: Column widths have changed (longtable) in table 47.126 on input line 186. Package longtable Warning: Column widths have changed (longtable) in table 47.127 on input line 235. [330] [331] Package longtable Warning: Column widths have changed (longtable) in table 47.128 on input line 309. [332] [333] Package longtable Warning: Column widths have changed (longtable) in table 47.129 on input line 357. Package longtable Warning: Column widths have changed (longtable) in table 47.130 on input line 394. ) (./namespaceideal__age__example.tex [334] [335] Package longtable Warning: Column widths have changed (longtable) in table 47.131 on input line 53. Package longtable Warning: Column widths have changed (longtable) in table 47.132 on input line 98. Underfull \hbox (badness 10000) detected at line 99 [][][] [336] [337] Package longtable Warning: Column widths have changed (longtable) in table 47.133 on input line 191. [338] Package longtable Warning: Column widths have changed (longtable) in table 47.134 on input line 303. [339] Package longtable Warning: Column widths have changed (longtable) in table 47.135 on input line 370. Underfull \vbox (badness 10000) has occurred while \output is active [340] [341] Package longtable Warning: Column widths have changed (longtable) in table 47.136 on input line 486. [342] Underfull \vbox (badness 10000) has occurred while \output is active [343]) (./namespaceidealized__hurricane.tex [344] Package longtable Warning: Column widths have changed (longtable) in table 47.137 on input line 55. [345] Underfull \vbox (badness 10000) has occurred while \output is active [346] Package longtable Warning: Column widths have changed (longtable) in table 47.138 on input line 204. [347] [348] Package longtable Warning: Column widths have changed (longtable) in table 47.139 on input line 351. [349] Underfull \vbox (badness 10000) has occurred while \output is active [350] Package longtable Warning: Column widths have changed (longtable) in table 47.140 on input line 524. [351] Underfull \vbox (badness 10000) has occurred while \output is active [352] Underfull \vbox (badness 10000) has occurred while \output is active [353]) (./namespaceisomip__initialization.tex Overfull \hbox (53.15218pt too wide) in paragraph at lines 8--8 []\T1/phv/m/n/10 See this pa-per for details[]: [][]\T1/pcr/m/n/10 http[]://www .[]geosci-model-dev-discuss.[]net/8/9859/2015/gmdd-8-9859-2015.[] [354] Package longtable Warning: Column widths have changed (longtable) in table 47.141 on input line 56. [355] Underfull \vbox (badness 10000) has occurred while \output is active [356] Underfull \vbox (badness 10000) has occurred while \output is active [357] [358] Package longtable Warning: Column widths have changed (longtable) in table 47.142 on input line 343. [359] Underfull \vbox (badness 10000) has occurred while \output is active [360] Package longtable Warning: Column widths have changed (longtable) in table 47.143 on input line 545. [361] [362] [363] Package longtable Warning: Column widths have changed (longtable) in table 47.144 on input line 695. [364]) (./namespaceisomip__tracer.tex [365] Package longtable Warning: Column widths have changed (longtable) in table 47.145 on input line 65. [366] Underfull \vbox (badness 10000) has occurred while \output is active [367] Package longtable Warning: Column widths have changed (longtable) in table 47.146 on input line 205. [368] [369] Package longtable Warning: Column widths have changed (longtable) in table 47.147 on input line 301. Package longtable Warning: Column widths have changed (longtable) in table 47.148 on input line 337. [370] Package longtable Warning: Column widths have changed (longtable) in table 47.149 on input line 396. [371]) (./namespacekdtree.tex [372]) (./namespacekelvin__initialization.tex [373] Package longtable Warning: Column widths have changed (longtable) in table 47.150 on input line 49. [374] Package longtable Warning: Column widths have changed (longtable) in table 47.151 on input line 119. Overfull \hbox (16.48654pt too wide) in alignment at lines 158--158 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.152 on input line 158. [375] Underfull \vbox (badness 10000) has occurred while \output is active [376] Underfull \vbox (badness 10000) has occurred while \output is active [377] Package longtable Warning: Column widths have changed (longtable) in table 47.153 on input line 370. [378]) (./namespacelock__exchange__initialization.tex [379] Package longtable Warning: Column widths have changed (longtable) in table 47.154 on input line 38. [380]) (./namespacemeso__surface__forcing.tex [381] Package longtable Warning: Column widths have changed (longtable) in table 47.155 on input line 59. [382] Underfull \vbox (badness 10000) has occurred while \output is active [383] Package longtable Warning: Column widths have changed (longtable) in table 47.156 on input line 238. Underfull \vbox (badness 10000) has occurred while \output is active [384]) (./namespacemom.tex [385] Underfull \hbox (badness 10000) detected at line 10 [][][] [386] [387] [388] [389] [390] [391] [392] [393] Package longtable Warning: Column widths have changed (longtable) in table 47.157 on input line 321. [394] Package longtable Warning: Column widths have changed (longtable) in table 47.158 on input line 384. [395] Underfull \vbox (badness 10000) has occurred while \output is active [396] Underfull \vbox (badness 10000) has occurred while \output is active [397] Underfull \vbox (badness 10000) has occurred while \output is active [398] Underfull \vbox (badness 10000) has occurred while \output is active [399] [400] Package longtable Warning: Column widths have changed (longtable) in table 47.159 on input line 815. [401] Package longtable Warning: Column widths have changed (longtable) in table 47.160 on input line 895. [402] Package longtable Warning: Column widths have changed (longtable) in table 47.161 on input line 940. Package longtable Warning: Column widths have changed (longtable) in table 47.162 on input line 998. [403] [404] Underfull \vbox (badness 10000) has occurred while \output is active [405] Underfull \vbox (badness 10000) has occurred while \output is active [406] Underfull \vbox (badness 10000) has occurred while \output is active [407] Underfull \vbox (badness 10000) has occurred while \output is active [408] Underfull \vbox (badness 10000) has occurred while \output is active [409] Underfull \vbox (badness 10000) has occurred while \output is active [410] Underfull \vbox (badness 10000) has occurred while \output is active [411] Underfull \vbox (badness 10000) has occurred while \output is active [412] Underfull \vbox (badness 10000) has occurred while \output is active [413] Underfull \vbox (badness 10000) has occurred while \output is active [414] Underfull \vbox (badness 10000) has occurred while \output is active [415] Underfull \vbox (badness 10000) has occurred while \output is active [416] Underfull \vbox (badness 10000) has occurred while \output is active [417] [418] Package longtable Warning: Column widths have changed (longtable) in table 47.163 on input line 2194. Package longtable Warning: Column widths have changed (longtable) in table 47.164 on input line 2258. [419] Underfull \hbox (badness 10000) detected at line 2259 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.165 on input line 2299. [420] Package longtable Warning: Column widths have changed (longtable) in table 47.166 on input line 2360. [421] Package longtable Warning: Column widths have changed (longtable) in table 47.167 on input line 2419. [422] Package longtable Warning: Column widths have changed (longtable) in table 47.168 on input line 2528. [423] [424] Underfull \vbox (badness 10000) has occurred while \output is active [425] Underfull \vbox (badness 10000) has occurred while \output is active [426] Underfull \vbox (badness 10000) has occurred while \output is active [427] Underfull \vbox (badness 10000) has occurred while \output is active [428] Underfull \vbox (badness 10000) has occurred while \output is active [429] [430] Package longtable Warning: Column widths have changed (longtable) in table 47.169 on input line 3086. [431] Underfull \vbox (badness 10000) has occurred while \output is active [432] [433] Package longtable Warning: Column widths have changed (longtable) in table 47.170 on input line 3312. [434] Underfull \vbox (badness 10000) has occurred while \output is active [435] [436] Package longtable Warning: Column widths have changed (longtable) in table 47.171 on input line 3530. [437] Package longtable Warning: Column widths have changed (longtable) in table 47.172 on input line 3638. Underfull \vbox (badness 10000) has occurred while \output is active [438] [439] Underfull \vbox (badness 10000) has occurred while \output is active [440]) (./namespacemom__ale.tex [441] [442] Package longtable Warning: Column widths have changed (longtable) in table 47.173 on input line 93. Underfull \vbox (badness 10000) has occurred while \output is active [443] Package longtable Warning: Column widths have changed (longtable) in table 47.174 on input line 136. [444] Package longtable Warning: Column widths have changed (longtable) in table 47.175 on input line 197. [445] Package longtable Warning: Column widths have changed (longtable) in table 47.176 on input line 227. Package longtable Warning: Column widths have changed (longtable) in table 47.177 on input line 254. [446] Package longtable Warning: Column widths have changed (longtable) in table 47.178 on input line 290. [447] Package longtable Warning: Column widths have changed (longtable) in table 47.179 on input line 428. Overfull \vbox (24.87663pt too high) has occurred while \output is active [448] Package longtable Warning: Column widths have changed (longtable) in table 47.180 on input line 473. [449] Package longtable Warning: Column widths have changed (longtable) in table 47.181 on input line 529. [450] [451] Package longtable Warning: Column widths have changed (longtable) in table 47.182 on input line 649. [452] Package longtable Warning: Column widths have changed (longtable) in table 47.183 on input line 741. [453] [454] Package longtable Warning: Column widths have changed (longtable) in table 47.184 on input line 851. [455] Package longtable Warning: Column widths have changed (longtable) in table 47.185 on input line 929. [456] Package longtable Warning: Column widths have changed (longtable) in table 47.186 on input line 1017. Underfull \vbox (badness 10000) has occurred while \output is active [457] Underfull \hbox (badness 10000) in paragraph at lines 1065--1066 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional [458] Package longtable Warning: Column widths have changed (longtable) in table 47.187 on input line 1099. [459] Package longtable Warning: Column widths have changed (longtable) in table 47.188 on input line 1198. [460] Package longtable Warning: Column widths have changed (longtable) in table 47.189 on input line 1244. [461] Package longtable Warning: Column widths have changed (longtable) in table 47.190 on input line 1339. [462] Package longtable Warning: Column widths have changed (longtable) in table 47.191 on input line 1376. [463] Package longtable Warning: Column widths have changed (longtable) in table 47.192 on input line 1415. Package longtable Warning: Column widths have changed (longtable) in table 47.193 on input line 1469. [464] Package longtable Warning: Column widths have changed (longtable) in table 47.194 on input line 1538. [465] [466] Underfull \vbox (badness 10000) has occurred while \output is active [467] [468] Package longtable Warning: Column widths have changed (longtable) in table 47.195 on input line 1772. [469] Package longtable Warning: Column widths have changed (longtable) in table 47.196 on input line 1832. [470]) (./namespacemom__ale__sponge.tex [471] [472] Package longtable Warning: Column widths have changed (longtable) in table 47.197 on input line 76. Overfull \hbox (16.48654pt too wide) in alignment at lines 134--134 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.198 on input line 134. Overfull \vbox (10.4989pt too high) has occurred while \output is active [473] [474] Underfull \vbox (badness 10000) has occurred while \output is active [475] Package longtable Warning: Column widths have changed (longtable) in table 47.199 on input line 372. Underfull \vbox (badness 10000) has occurred while \output is active [476] Underfull \hbox (badness 10000) detected at line 373 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.200 on input line 412. [477] Package longtable Warning: Column widths have changed (longtable) in table 47.201 on input line 472. [478] Package longtable Warning: Column widths have changed (longtable) in table 47.202 on input line 514. [479] Underfull \vbox (badness 10000) has occurred while \output is active [480] [481] Package longtable Warning: Column widths have changed (longtable) in table 47.203 on input line 738. [482] Underfull \vbox (badness 10000) has occurred while \output is active [483] Package longtable Warning: Column widths have changed (longtable) in table 47.204 on input line 921. [484] Underfull \vbox (badness 10000) has occurred while \output is active [485] Package longtable Warning: Column widths have changed (longtable) in table 47.205 on input line 1082. [486] Package longtable Warning: Column widths have changed (longtable) in table 47.206 on input line 1151. Underfull \vbox (badness 10000) has occurred while \output is active [487] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [488] Package longtable Warning: Column widths have changed (longtable) in table 47.207 on input line 1244. Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [489] Package longtable Warning: Column widths have changed (longtable) in table 47.208 on input line 1320. [490] Underfull \hbox (badness 10000) in paragraph at lines 1413--1414 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), target \T1/pcr/m/sl/8 p[]_[]new Overfull \hbox (16.38017pt too wide) in alignment at lines 1431--1431 [] [] [] [491] Package longtable Warning: Column widths have changed (longtable) in table 47.209 on input line 1431. ) (./namespacemom__array__transform.tex [492] [493] Package longtable Warning: Column widths have changed (longtable) in table 47.210 on input line 77. Package longtable Warning: Column widths have changed (longtable) in table 47.211 on input line 119. [494] Package longtable Warning: Column widths have changed (longtable) in table 47.212 on input line 162. [495] Package longtable Warning: Column widths have changed (longtable) in table 47.213 on input line 205. Package longtable Warning: Column widths have changed (longtable) in table 47.214 on input line 246. [496] Package longtable Warning: Column widths have changed (longtable) in table 47.215 on input line 292. [497] Package longtable Warning: Column widths have changed (longtable) in table 47.216 on input line 342. Package longtable Warning: Column widths have changed (longtable) in table 47.217 on input line 385. Underfull \vbox (badness 10000) has occurred while \output is active [498] Package longtable Warning: Column widths have changed (longtable) in table 47.218 on input line 428. [499] Package longtable Warning: Column widths have changed (longtable) in table 47.219 on input line 466. Package longtable Warning: Column widths have changed (longtable) in table 47.220 on input line 512. Underfull \vbox (badness 10000) has occurred while \output is active [500] Package longtable Warning: Column widths have changed (longtable) in table 47.221 on input line 547. [501] Package longtable Warning: Column widths have changed (longtable) in table 47.222 on input line 586. Package longtable Warning: Column widths have changed (longtable) in table 47.223 on input line 629. [502] Package longtable Warning: Column widths have changed (longtable) in table 47.224 on input line 670. ) (./namespacemom__barotropic.tex [503] [504] [505] [506] Package longtable Warning: Column widths have changed (longtable) in table 47.225 on input line 178. Overfull \vbox (56.21756pt too high) has occurred while \output is active [507] [508] [509] Package longtable Warning: Column widths have changed (longtable) in table 47.226 on input line 356. [510] Underfull \vbox (badness 10000) has occurred while \output is active [511] Underfull \vbox (badness 10000) has occurred while \output is active [512] [513] Package longtable Warning: Column widths have changed (longtable) in table 47.227 on input line 606. Package longtable Warning: Column widths have changed (longtable) in table 47.228 on input line 649. [514] Package longtable Warning: Column widths have changed (longtable) in table 47.229 on input line 717. Underfull \vbox (badness 10000) has occurred while \output is active [515] [516] Underfull \vbox (badness 10000) has occurred while \output is active [517] Underfull \vbox (badness 10000) has occurred while \output is active [518] Underfull \vbox (badness 10000) has occurred while \output is active [519] Underfull \vbox (badness 10000) has occurred while \output is active [520] Underfull \vbox (badness 10000) has occurred while \output is active [521] Underfull \vbox (badness 10000) has occurred while \output is active [522] Underfull \vbox (badness 10000) has occurred while \output is active [523] [524] Package longtable Warning: Column widths have changed (longtable) in table 47.230 on input line 1468. [525] Package longtable Warning: Column widths have changed (longtable) in table 47.231 on input line 1541. [526] Package longtable Warning: Column widths have changed (longtable) in table 47.232 on input line 1633. [527] Underfull \vbox (badness 10000) has occurred while \output is active [528] Underfull \vbox (badness 10000) has occurred while \output is active [529] Underfull \vbox (badness 10000) has occurred while \output is active [530] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] [531] Package longtable Warning: Column widths have changed (longtable) in table 47.233 on input line 1992. [532] [533] Underfull \vbox (badness 10000) has occurred while \output is active [534] Underfull \vbox (badness 10000) has occurred while \output is active [535] Underfull \vbox (badness 10000) has occurred while \output is active [536] Underfull \vbox (badness 10000) has occurred while \output is active [537] Underfull \vbox (badness 10000) has occurred while \output is active [538] Underfull \vbox (badness 10000) has occurred while \output is active [539] Underfull \vbox (badness 10000) has occurred while \output is active [540] Underfull \vbox (badness 10000) has occurred while \output is active [541] Underfull \vbox (badness 10000) has occurred while \output is active [542] Underfull \vbox (badness 10000) has occurred while \output is active [543] Underfull \vbox (badness 10000) has occurred while \output is active [544] Underfull \vbox (badness 10000) has occurred while \output is active [545] Underfull \vbox (badness 10000) has occurred while \output is active [546] Underfull \vbox (badness 10000) has occurred while \output is active [547] Underfull \vbox (badness 10000) has occurred while \output is active [548] Underfull \vbox (badness 10000) has occurred while \output is active [549] Underfull \vbox (badness 10000) has occurred while \output is active [550] Underfull \vbox (badness 10000) has occurred while \output is active [551] Underfull \vbox (badness 10000) has occurred while \output is active [552] Underfull \vbox (badness 10000) has occurred while \output is active [553] Underfull \vbox (badness 10000) has occurred while \output is active [554] Underfull \vbox (badness 10000) has occurred while \output is active [555] Underfull \vbox (badness 10000) has occurred while \output is active [556] Underfull \vbox (badness 10000) has occurred while \output is active [557] Underfull \vbox (badness 10000) has occurred while \output is active [558] Underfull \vbox (badness 10000) has occurred while \output is active [559] Underfull \vbox (badness 10000) has occurred while \output is active [560] [561] Package longtable Warning: Column widths have changed (longtable) in table 47.234 on input line 4300. Overfull \hbox (21.48143pt too wide) in alignment at lines 4342--4342 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.235 on input line 4342. Underfull \hbox (badness 10000) detected at line 4343 [][][] [562] Overfull \hbox (21.48143pt too wide) in alignment at lines 4389--4389 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.236 on input line 4389. Underfull \hbox (badness 10000) detected at line 4390 [][][] [563] Package longtable Warning: Column widths have changed (longtable) in table 47.237 on input line 4452. [564] Overfull \hbox (21.48143pt too wide) in alignment at lines 4568--4568 [] [] [] [565] Package longtable Warning: Column widths have changed (longtable) in table 47.238 on input line 4568. Underfull \hbox (badness 10000) detected at line 4569 [][][] Overfull \hbox (21.48143pt too wide) in alignment at lines 4617--4617 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.239 on input line 4617. [566] Underfull \hbox (badness 10000) detected at line 4618 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.240 on input line 4671. [567] [568] Package longtable Warning: Column widths have changed (longtable) in table 47.241 on input line 4766. [569] Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]u[]_[]type[][]), dimension( ms %isdw-1[]: ms %iedw, ms %jsdw[]: ms %jedw), Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]v[]_[]type[][]), dimension( ms %isdw[]: ms %iedw, ms %jsdw-1[]: ms %jedw), [570] Package longtable Warning: Column widths have changed (longtable) in table 47.242 on input line 4919. [571] Underfull \vbox (badness 10000) has occurred while \output is active [572] Underfull \hbox (badness 10000) in paragraph at lines 5077--5078 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]v[]_[]type[][]), dimension( sziw[]_[](ms),szjbw[]_[](ms)), intent(in) \T1/pcr/m/sl/8 B[]T[]C[]L[]_[]v \T1/p cr/m/n/8 ) Package longtable Warning: Column widths have changed (longtable) in table 47.243 on input line 5117. [573] [574] Underfull \vbox (badness 10000) has occurred while \output is active [575] Underfull \vbox (badness 10000) has occurred while \output is active [576] Package longtable Warning: Column widths have changed (longtable) in table 47.244 on input line 5344. Package longtable Warning: Column widths have changed (longtable) in table 47.245 on input line 5374. [577] Underfull \hbox (badness 10000) detected at line 5375 [][][] [578] Package longtable Warning: Column widths have changed (longtable) in table 47.246 on input line 5506. Underfull \hbox (badness 10000) detected at line 5507 [][][] [579] Underfull \vbox (badness 10000) has occurred while \output is active [580]) (./namespacemom__bkgnd__mixing.tex [581] Package longtable Warning: Column widths have changed (longtable) in table 47.247 on input line 47. Package longtable Warning: Column widths have changed (longtable) in table 47.248 on input line 87. Overfull \vbox (4.83084pt too high) has occurred while \output is active [582] [583] Underfull \vbox (badness 10000) has occurred while \output is active [584] Package longtable Warning: Column widths have changed (longtable) in table 47.249 on input line 323. [585] [586] Underfull \vbox (badness 10000) has occurred while \output is active [587] [588] Package longtable Warning: Column widths have changed (longtable) in table 47.250 on input line 561. Package longtable Warning: Column widths have changed (longtable) in table 47.251 on input line 594. ) (./namespacemom__boundary__update.tex [589] [590] Package longtable Warning: Column widths have changed (longtable) in table 47.252 on input line 55. [591] Package longtable Warning: Column widths have changed (longtable) in table 47.253 on input line 125. Package longtable Warning: Column widths have changed (longtable) in table 47.254 on input line 168. [592]) (./namespacemom__bulk__mixed__layer.tex [593] [594] [595] Package longtable Warning: Column widths have changed (longtable) in table 47.255 on input line 127. [596] Underfull \vbox (badness 10000) has occurred while \output is active [597] Underfull \vbox (badness 10000) has occurred while \output is active [598] Underfull \vbox (badness 10000) has occurred while \output is active [599] Underfull \vbox (badness 10000) has occurred while \output is active [600] Underfull \vbox (badness 10000) has occurred while \output is active [601] Underfull \vbox (badness 10000) has occurred while \output is active [602] Underfull \vbox (badness 10000) has occurred while \output is active [603] Package longtable Warning: Column widths have changed (longtable) in table 47.256 on input line 771. [604] Underfull \vbox (badness 10000) has occurred while \output is active [605] Underfull \vbox (badness 10000) has occurred while \output is active [606] Underfull \vbox (badness 10000) has occurred while \output is active [607] [608] Package longtable Warning: Column widths have changed (longtable) in table 47.257 on input line 1122. [609] Underfull \vbox (badness 10000) has occurred while \output is active [610] Package longtable Warning: Column widths have changed (longtable) in table 47.258 on input line 1277. Underfull \hbox (badness 10000) detected at line 1278 [][][] [611] Package longtable Warning: Column widths have changed (longtable) in table 47.259 on input line 1357. [612] [613] Underfull \vbox (badness 10000) has occurred while \output is active [614] [615] Package longtable Warning: Column widths have changed (longtable) in table 47.260 on input line 1619. [616] [617] Underfull \vbox (badness 10000) has occurred while \output is active [618] Underfull \vbox (badness 10000) has occurred while \output is active [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] Package longtable Warning: Column widths have changed (longtable) in table 47.261 on input line 2058. [622] [623] Underfull \vbox (badness 10000) has occurred while \output is active [624] Underfull \vbox (badness 10000) has occurred while \output is active [625] Underfull \vbox (badness 10000) has occurred while \output is active [626] Underfull \vbox (badness 10000) has occurred while \output is active [627] [628] Package longtable Warning: Column widths have changed (longtable) in table 47.262 on input line 2488. [629] Underfull \vbox (badness 10000) has occurred while \output is active [630] Underfull \vbox (badness 10000) has occurred while \output is active [631] Underfull \vbox (badness 10000) has occurred while \output is active [632] Package longtable Warning: Column widths have changed (longtable) in table 47.263 on input line 2828. [633] [634] Underfull \vbox (badness 10000) has occurred while \output is active [635] Underfull \vbox (badness 10000) has occurred while \output is active [636] Underfull \vbox (badness 10000) has occurred while \output is active [637] Underfull \vbox (badness 10000) has occurred while \output is active [638] Underfull \vbox (badness 10000) has occurred while \output is active [639] Underfull \vbox (badness 10000) has occurred while \output is active [640] Underfull \vbox (badness 10000) has occurred while \output is active [641] Underfull \vbox (badness 10000) has occurred while \output is active [642] Underfull \vbox (badness 10000) has occurred while \output is active [643] Underfull \vbox (badness 10000) has occurred while \output is active [644] [645] Package longtable Warning: Column widths have changed (longtable) in table 47.264 on input line 3766. [646] Underfull \vbox (badness 10000) has occurred while \output is active [647] Underfull \vbox (badness 10000) has occurred while \output is active [648] Underfull \vbox (badness 10000) has occurred while \output is active [649] Package longtable Warning: Column widths have changed (longtable) in table 47.265 on input line 4118. [650]) (./namespacemom__checksum__packages.tex [651] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 u[] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 v[] Package longtable Warning: Column widths have changed (longtable) in table 47.266 on input line 71. [652] [653] Package longtable Warning: Column widths have changed (longtable) in table 47.267 on input line 161. [654] Package longtable Warning: Column widths have changed (longtable) in table 47.268 on input line 233. [655] Package longtable Warning: Column widths have changed (longtable) in table 47.269 on input line 313. Underfull \vbox (badness 10000) has occurred while \output is active [656] [657] [658] Package longtable Warning: Column widths have changed (longtable) in table 47.270 on input line 480. [659] Package longtable Warning: Column widths have changed (longtable) in table 47.271 on input line 540. ) (./namespacemom__checksums.tex [660] [661] [662] Package longtable Warning: Column widths have changed (longtable) in table 47.272 on input line 135. Package longtable Warning: Column widths have changed (longtable) in table 47.273 on input line 169. [663] Package longtable Warning: Column widths have changed (longtable) in table 47.274 on input line 206. [664] Package longtable Warning: Column widths have changed (longtable) in table 47.275 on input line 246. Package longtable Warning: Column widths have changed (longtable) in table 47.276 on input line 294. Underfull \vbox (badness 10000) has occurred while \output is active [665] Package longtable Warning: Column widths have changed (longtable) in table 47.277 on input line 341. [666] Package longtable Warning: Column widths have changed (longtable) in table 47.278 on input line 382. Package longtable Warning: Column widths have changed (longtable) in table 47.279 on input line 420. Overfull \vbox (6.56526pt too high) has occurred while \output is active [667] Package longtable Warning: Column widths have changed (longtable) in table 47.280 on input line 456. [668] Package longtable Warning: Column widths have changed (longtable) in table 47.281 on input line 514. [669] Package longtable Warning: Column widths have changed (longtable) in table 47.282 on input line 589. [670] Package longtable Warning: Column widths have changed (longtable) in table 47.283 on input line 637. Package longtable Warning: Column widths have changed (longtable) in table 47.284 on input line 698. Overfull \vbox (36.94623pt too high) has occurred while \output is active [671] [672] Underfull \vbox (badness 10000) has occurred while \output is active [673] Package longtable Warning: Column widths have changed (longtable) in table 47.285 on input line 896. [674] Underfull \vbox (badness 10000) has occurred while \output is active [675] [676] Package longtable Warning: Column widths have changed (longtable) in table 47.286 on input line 1087. Package longtable Warning: Column widths have changed (longtable) in table 47.287 on input line 1125. [677] Underfull \vbox (badness 10000) has occurred while \output is active [678] [679] Package longtable Warning: Column widths have changed (longtable) in table 47.288 on input line 1301. [680] Underfull \vbox (badness 10000) has occurred while \output is active [681] Package longtable Warning: Column widths have changed (longtable) in table 47.289 on input line 1486. [682] Package longtable Warning: Column widths have changed (longtable) in table 47.290 on input line 1581. [683] [684] Package longtable Warning: Column widths have changed (longtable) in table 47.291 on input line 1672. [685] Package longtable Warning: Column widths have changed (longtable) in table 47.292 on input line 1756. [686] Package longtable Warning: Column widths have changed (longtable) in table 47.293 on input line 1842. [687] [688] Underfull \vbox (badness 10000) has occurred while \output is active [689] Package longtable Warning: Column widths have changed (longtable) in table 47.294 on input line 2052. [690] Underfull \vbox (badness 10000) has occurred while \output is active [691] Underfull \vbox (badness 10000) has occurred while \output is active [692] Package longtable Warning: Column widths have changed (longtable) in table 47.295 on input line 2266. [693] [694] Package longtable Warning: Column widths have changed (longtable) in table 47.296 on input line 2358. [695] Package longtable Warning: Column widths have changed (longtable) in table 47.297 on input line 2447. [696] Underfull \vbox (badness 10000) has occurred while \output is active [697] [698] Package longtable Warning: Column widths have changed (longtable) in table 47.298 on input line 2657. [699] Underfull \vbox (badness 10000) has occurred while \output is active [700] Package longtable Warning: Column widths have changed (longtable) in table 47.299 on input line 2854. [701] Package longtable Warning: Column widths have changed (longtable) in table 47.300 on input line 2890. [702] Package longtable Warning: Column widths have changed (longtable) in table 47.301 on input line 2931. Package longtable Warning: Column widths have changed (longtable) in table 47.302 on input line 2966. [703] Package longtable Warning: Column widths have changed (longtable) in table 47.303 on input line 3003. Package longtable Warning: Column widths have changed (longtable) in table 47.304 on input line 3038. [704]) (./namespacemom__coms.tex [705] [706] [707] Package longtable Warning: Column widths have changed (longtable) in table 47.305 on input line 124. [708] Package longtable Warning: Column widths have changed (longtable) in table 47.306 on input line 167. Package longtable Warning: Column widths have changed (longtable) in table 47.307 on input line 201. [709] Underfull \hbox (badness 10000) detected at line 265 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.308 on input line 274. [710] Underfull \hbox (badness 10000) detected at line 301 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.309 on input line 310. Package longtable Warning: Column widths have changed (longtable) in table 47.310 on input line 341. Underfull \hbox (badness 10000) detected at line 342 [][][] [711] Package longtable Warning: Column widths have changed (longtable) in table 47.311 on input line 376. Package longtable Warning: Column widths have changed (longtable) in table 47.312 on input line 405. [712] Package longtable Warning: Column widths have changed (longtable) in table 47.313 on input line 473. [713] Package longtable Warning: Column widths have changed (longtable) in table 47.314 on input line 528. [714] Package longtable Warning: Column widths have changed (longtable) in table 47.315 on input line 578. Package longtable Warning: Column widths have changed (longtable) in table 47.316 on input line 610. Overfull \vbox (6.82013pt too high) has occurred while \output is active [715] Package longtable Warning: Column widths have changed (longtable) in table 47.317 on input line 655. [716] Package longtable Warning: Column widths have changed (longtable) in table 47.318 on input line 714. [717] Package longtable Warning: Column widths have changed (longtable) in table 47.319 on input line 787. Underfull \hbox (badness 10000) detected at line 788 [][][] [718] Underfull \vbox (badness 10000) has occurred while \output is active [719] Package longtable Warning: Column widths have changed (longtable) in table 47.320 on input line 949. [720] Underfull \hbox (badness 10000) detected at line 950 [][][] [721] [722] Package longtable Warning: Column widths have changed (longtable) in table 47.321 on input line 1089. Underfull \hbox (badness 10000) detected at line 1090 [][][] [723] Underfull \vbox (badness 10000) has occurred while \output is active [724]) (./namespacemom__constants.tex) (./namespacemom__continuity.tex [725] Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [726] Package longtable Warning: Column widths have changed (longtable) in table 47.322 on input line 84. Overfull \vbox (5.65964pt too high) has occurred while \output is active [727] [728] Package longtable Warning: Column widths have changed (longtable) in table 47.323 on input line 169. Package longtable Warning: Column widths have changed (longtable) in table 47.324 on input line 211. [729] Package longtable Warning: Column widths have changed (longtable) in table 47.325 on input line 276. Underfull \hbox (badness 10000) detected at line 277 [][][] ) (./namespacemom__continuity__ppm.tex [730] [731] Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [732] Package longtable Warning: Column widths have changed (longtable) in table 47.326 on input line 120. [733] Underfull \vbox (badness 10000) has occurred while \output is active [734] Package longtable Warning: Column widths have changed (longtable) in table 47.327 on input line 275. [735] Package longtable Warning: Column widths have changed (longtable) in table 47.328 on input line 311. [736] [737] Package longtable Warning: Column widths have changed (longtable) in table 47.329 on input line 425. Underfull \hbox (badness 10000) detected at line 426 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.330 on input line 479. [738] [739] [740] [741] Package longtable Warning: Column widths have changed (longtable) in table 47.331 on input line 636. [742] [743] Package longtable Warning: Column widths have changed (longtable) in table 47.332 on input line 781. [744] Underfull \vbox (badness 10000) has occurred while \output is active [745] Underfull \hbox (badness 10000) in paragraph at lines 950--951 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional [746] Package longtable Warning: Column widths have changed (longtable) in table 47.333 on input line 986. [747] Underfull \vbox (badness 10000) has occurred while \output is active [748] Underfull \vbox (badness 10000) has occurred while \output is active [749] Underfull \vbox (badness 10000) has occurred while \output is active [750] Package longtable Warning: Column widths have changed (longtable) in table 47.334 on input line 1324. [751] [752] Package longtable Warning: Column widths have changed (longtable) in table 47.335 on input line 1395. [753] Package longtable Warning: Column widths have changed (longtable) in table 47.336 on input line 1471. [754] Underfull \vbox (badness 10000) has occurred while \output is active [755] Package longtable Warning: Column widths have changed (longtable) in table 47.337 on input line 1644. Underfull \vbox (badness 10000) has occurred while \output is active [756] [757] [758] Package longtable Warning: Column widths have changed (longtable) in table 47.338 on input line 1803. Underfull \hbox (badness 10000) detected at line 1804 [][][] [759] Package longtable Warning: Column widths have changed (longtable) in table 47.339 on input line 1874. [760] Underfull \vbox (badness 10000) has occurred while \output is active [761] [762] Package longtable Warning: Column widths have changed (longtable) in table 47.340 on input line 2089. [763] Underfull \vbox (badness 10000) has occurred while \output is active [764] Underfull \hbox (badness 10000) in paragraph at lines 2258--2259 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional [765] Package longtable Warning: Column widths have changed (longtable) in table 47.341 on input line 2292. [766] Underfull \hbox (badness 10000) in paragraph at lines 2406--2407 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), optional [767] Package longtable Warning: Column widths have changed (longtable) in table 47.342 on input line 2458. [768] [769] Underfull \vbox (badness 10000) has occurred while \output is active [770] Package longtable Warning: Column widths have changed (longtable) in table 47.343 on input line 2667. [771] [772] Underfull \hbox (badness 10000) in paragraph at lines 2756--2757 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Package longtable Warning: Column widths have changed (longtable) in table 47.344 on input line 2792. [773] [774] Underfull \vbox (badness 10000) has occurred while \output is active [775] Underfull \vbox (badness 10000) has occurred while \output is active [776] Underfull \vbox (badness 10000) has occurred while \output is active [777]) (./namespacemom__controlled__forcing.tex [778] Package longtable Warning: Column widths have changed (longtable) in table 47.345 on input line 76. Overfull \vbox (29.87068pt too high) has occurred while \output is active [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] Underfull \vbox (badness 10000) has occurred while \output is active [782] Package longtable Warning: Column widths have changed (longtable) in table 47.346 on input line 388. [783] Package longtable Warning: Column widths have changed (longtable) in table 47.347 on input line 436. [784] [785] Package longtable Warning: Column widths have changed (longtable) in table 47.348 on input line 536. Underfull \hbox (badness 10000) detected at line 537 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.349 on input line 573. Underfull \hbox (badness 10000) detected at line 574 [][][] [786] Package longtable Warning: Column widths have changed (longtable) in table 47.350 on input line 614. [787]) (./namespacemom__coord__initialization.tex [788] Package longtable Warning: Column widths have changed (longtable) in table 47.351 on input line 64. [789] [790] Package longtable Warning: Column widths have changed (longtable) in table 47.352 on input line 175. [791] Package longtable Warning: Column widths have changed (longtable) in table 47.353 on input line 249. [792] Package longtable Warning: Column widths have changed (longtable) in table 47.354 on input line 309. [793] Package longtable Warning: Column widths have changed (longtable) in table 47.355 on input line 382. [794] Package longtable Warning: Column widths have changed (longtable) in table 47.356 on input line 459. [795] Package longtable Warning: Column widths have changed (longtable) in table 47.357 on input line 574. Overfull \vbox (43.5485pt too high) has occurred while \output is active [796] [797] Package longtable Warning: Column widths have changed (longtable) in table 47.358 on input line 651. [798] Package longtable Warning: Column widths have changed (longtable) in table 47.359 on input line 719. Package longtable Warning: Column widths have changed (longtable) in table 47.360 on input line 772. Underfull \vbox (badness 10000) has occurred while \output is active [799]) (./namespacemom__coriolisadv.tex [800] [801] [802] Package longtable Warning: Column widths have changed (longtable) in table 47.361 on input line 155. [803] Underfull \vbox (badness 10000) has occurred while \output is active [804] Underfull \vbox (badness 10000) has occurred while \output is active [805] Underfull \vbox (badness 10000) has occurred while \output is active [806] Underfull \vbox (badness 10000) has occurred while \output is active [807] Underfull \vbox (badness 10000) has occurred while \output is active [808] Underfull \vbox (badness 10000) has occurred while \output is active [809] Underfull \vbox (badness 10000) has occurred while \output is active [810] Underfull \vbox (badness 10000) has occurred while \output is active [811] Underfull \vbox (badness 10000) has occurred while \output is active [812] Package longtable Warning: Column widths have changed (longtable) in table 47.362 on input line 987. [813] Package longtable Warning: Column widths have changed (longtable) in table 47.363 on input line 1025. [814] Underfull \vbox (badness 10000) has occurred while \output is active [815] Underfull \vbox (badness 10000) has occurred while \output is active [816] Package longtable Warning: Column widths have changed (longtable) in table 47.364 on input line 1299. Overfull \vbox (28.26488pt too high) has occurred while \output is active [817] [818]) (./namespacemom__cpu__clock.tex Package longtable Warning: Column widths have changed (longtable) in table 47.365 on input line 32. Underfull \hbox (badness 10000) detected at line 33 [][][] [819]) (./namespacemom__cvmix__conv.tex [820] Package longtable Warning: Column widths have changed (longtable) in table 47.366 on input line 57. [821] [822] Package longtable Warning: Column widths have changed (longtable) in table 47.367 on input line 188. Package longtable Warning: Column widths have changed (longtable) in table 47.368 on input line 232. [823] Underfull \vbox (badness 10000) has occurred while \output is active [824] Package longtable Warning: Column widths have changed (longtable) in table 47.369 on input line 347. ) (./namespacemom__cvmix__ddiff.tex [825] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional Package longtable Warning: Column widths have changed (longtable) in table 47.370 on input line 63. Overfull \vbox (77.46162pt too high) has occurred while \output is active [826] [827] Package longtable Warning: Column widths have changed (longtable) in table 47.371 on input line 217. Underfull \vbox (badness 10000) has occurred while \output is active [828] Package longtable Warning: Column widths have changed (longtable) in table 47.372 on input line 256. [829] [830] [831] Package longtable Warning: Column widths have changed (longtable) in table 47.373 on input line 365. ) (./namespacemom__cvmix__kpp.tex [832] [833] Package longtable Warning: Column widths have changed (longtable) in table 47.374 on input line 138. [834] Underfull \vbox (badness 10000) has occurred while \output is active [835] Underfull \vbox (badness 10000) has occurred while \output is active [836] Underfull \vbox (badness 10000) has occurred while \output is active [837] [838] Package longtable Warning: Column widths have changed (longtable) in table 47.375 on input line 492. [839] Underfull \vbox (badness 10000) has occurred while \output is active [840] Underfull \vbox (badness 10000) has occurred while \output is active [841] Underfull \vbox (badness 10000) has occurred while \output is active [842] Underfull \vbox (badness 10000) has occurred while \output is active [843] Package longtable Warning: Column widths have changed (longtable) in table 47.376 on input line 899. [844] Package longtable Warning: Column widths have changed (longtable) in table 47.377 on input line 935. [845] Package longtable Warning: Column widths have changed (longtable) in table 47.378 on input line 991. [846] Underfull \vbox (badness 10000) has occurred while \output is active [847] Underfull \vbox (badness 10000) has occurred while \output is active [848] Underfull \vbox (badness 10000) has occurred while \output is active [849] Underfull \vbox (badness 10000) has occurred while \output is active [850] Underfull \hbox (badness 10000) in paragraph at lines 1420--1421 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] Package longtable Warning: Column widths have changed (longtable) in table 47.379 on input line 1444. Overfull \vbox (40.83766pt too high) has occurred while \output is active [851] Underfull \hbox (badness 10000) in paragraph at lines 1515--1516 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] [852] Package longtable Warning: Column widths have changed (longtable) in table 47.380 on input line 1541. [853] Package longtable Warning: Column widths have changed (longtable) in table 47.381 on input line 1629. [854]) (./namespacemom__cvmix__shear.tex [855] Package longtable Warning: Column widths have changed (longtable) in table 47.382 on input line 63. Overfull \vbox (65.14655pt too high) has occurred while \output is active [856] [857] [858] Package longtable Warning: Column widths have changed (longtable) in table 47.383 on input line 224. Underfull \hbox (badness 10000) detected at line 254 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.384 on input line 273. Underfull \vbox (badness 10000) has occurred while \output is active [859] [860] Package longtable Warning: Column widths have changed (longtable) in table 47.385 on input line 402. ) (./namespacemom__debugging.tex [861] [862] [863] Package longtable Warning: Column widths have changed (longtable) in table 47.386 on input line 111. Package longtable Warning: Column widths have changed (longtable) in table 47.387 on input line 172. Overfull \vbox (14.49733pt too high) has occurred while \output is active [864] [865] Package longtable Warning: Column widths have changed (longtable) in table 47.388 on input line 252. [866] Package longtable Warning: Column widths have changed (longtable) in table 47.389 on input line 340. [867] Package longtable Warning: Column widths have changed (longtable) in table 47.390 on input line 395. [868] Package longtable Warning: Column widths have changed (longtable) in table 47.391 on input line 469. [869] Package longtable Warning: Column widths have changed (longtable) in table 47.392 on input line 527. [870] Package longtable Warning: Column widths have changed (longtable) in table 47.393 on input line 637. Overfull \vbox (0.46025pt too high) has occurred while \output is active [871] Package longtable Warning: Column widths have changed (longtable) in table 47.394 on input line 700. Underfull \vbox (badness 10000) has occurred while \output is active [872] [873] Package longtable Warning: Column widths have changed (longtable) in table 47.395 on input line 809. [874] Package longtable Warning: Column widths have changed (longtable) in table 47.396 on input line 872. [875] Package longtable Warning: Column widths have changed (longtable) in table 47.397 on input line 969. Underfull \vbox (badness 10000) has occurred while \output is active [876] Package longtable Warning: Column widths have changed (longtable) in table 47.398 on input line 1026. [877] Package longtable Warning: Column widths have changed (longtable) in table 47.399 on input line 1081. [878] Package longtable Warning: Column widths have changed (longtable) in table 47.400 on input line 1134. [879] Package longtable Warning: Column widths have changed (longtable) in table 47.401 on input line 1191. [880] Package longtable Warning: Column widths have changed (longtable) in table 47.402 on input line 1246. [881] Package longtable Warning: Column widths have changed (longtable) in table 47.403 on input line 1300. Package longtable Warning: Column widths have changed (longtable) in table 47.404 on input line 1344. [882] Package longtable Warning: Column widths have changed (longtable) in table 47.405 on input line 1392. Underfull \hbox (badness 10000) detected at line 1393 [][][] [883] Package longtable Warning: Column widths have changed (longtable) in table 47.406 on input line 1443. ) (./namespacemom__density__integrals.tex [884] [885] Package longtable Warning: Column widths have changed (longtable) in table 47.407 on input line 72. [886] [887] Overfull \hbox (18.90366pt too wide) in alignment at lines 191--191 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.408 on input line 191. [888] Package longtable Warning: Column widths have changed (longtable) in table 47.409 on input line 286. [889] Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [890] Package longtable Warning: Column widths have changed (longtable) in table 47.410 on input line 388. [891] Underfull \vbox (badness 10000) has occurred while \output is active [892] Underfull \vbox (badness 10000) has occurred while \output is active [893] [894] Package longtable Warning: Column widths have changed (longtable) in table 47.411 on input line 646. [895] Underfull \vbox (badness 10000) has occurred while \output is active [896] Underfull \vbox (badness 10000) has occurred while \output is active [897] Underfull \vbox (badness 10000) has occurred while \output is active [898] Underfull \vbox (badness 10000) has occurred while \output is active [899] Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional Package longtable Warning: Column widths have changed (longtable) in table 47.412 on input line 1080. [900] [901] Underfull \vbox (badness 10000) has occurred while \output is active [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] Underfull \vbox (badness 10000) has occurred while \output is active [904] Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [905] Package longtable Warning: Column widths have changed (longtable) in table 47.413 on input line 1463. [906] Underfull \vbox (badness 10000) has occurred while \output is active [907] Underfull \vbox (badness 10000) has occurred while \output is active [908] Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [909] Package longtable Warning: Column widths have changed (longtable) in table 47.414 on input line 1724. [910] Underfull \vbox (badness 10000) has occurred while \output is active [911] Underfull \vbox (badness 10000) has occurred while \output is active [912] [913] Package longtable Warning: Column widths have changed (longtable) in table 47.415 on input line 2018. [914]) (./namespacemom__diabatic__aux.tex [915] [916] Package longtable Warning: Column widths have changed (longtable) in table 47.416 on input line 80. [917] Package longtable Warning: Column widths have changed (longtable) in table 47.417 on input line 188. [918] [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] Underfull \vbox (badness 10000) has occurred while \output is active [921] Underfull \vbox (badness 10000) has occurred while \output is active [922] Underfull \vbox (badness 10000) has occurred while \output is active [923] Underfull \vbox (badness 10000) has occurred while \output is active [924] Underfull \vbox (badness 10000) has occurred while \output is active [925] Package longtable Warning: Column widths have changed (longtable) in table 47.418 on input line 758. [926] Package longtable Warning: Column widths have changed (longtable) in table 47.419 on input line 808. [927] Underfull \vbox (badness 10000) has occurred while \output is active [928] Package longtable Warning: Column widths have changed (longtable) in table 47.420 on input line 1009. Overfull \vbox (26.02458pt too high) has occurred while \output is active [929] [930] [931] Package longtable Warning: Column widths have changed (longtable) in table 47.421 on input line 1173. [932] Underfull \vbox (badness 10000) has occurred while \output is active [933] [934] Package longtable Warning: Column widths have changed (longtable) in table 47.422 on input line 1405. [935] [936] Package longtable Warning: Column widths have changed (longtable) in table 47.423 on input line 1542. [937] [938] Package longtable Warning: Column widths have changed (longtable) in table 47.424 on input line 1676. [939] [940] Package longtable Warning: Column widths have changed (longtable) in table 47.425 on input line 1828. [941] Package longtable Warning: Column widths have changed (longtable) in table 47.426 on input line 1927. [942]) (./namespacemom__diabatic__driver.tex [943] [944] [945] Package longtable Warning: Column widths have changed (longtable) in table 47.427 on input line 120. Package longtable Warning: Column widths have changed (longtable) in table 47.428 on input line 169. Overfull \vbox (14.49553pt too high) has occurred while \output is active [946] Package longtable Warning: Column widths have changed (longtable) in table 47.429 on input line 248. [947] [948] Underfull \vbox (badness 10000) has occurred while \output is active [949] [950] Package longtable Warning: Column widths have changed (longtable) in table 47.430 on input line 491. [951] Underfull \vbox (badness 10000) has occurred while \output is active [952] Underfull \vbox (badness 10000) has occurred while \output is active [953] Underfull \vbox (badness 10000) has occurred while \output is active [954] Underfull \vbox (badness 10000) has occurred while \output is active [955] Underfull \vbox (badness 10000) has occurred while \output is active [956] Underfull \vbox (badness 10000) has occurred while \output is active [957] Underfull \vbox (badness 10000) has occurred while \output is active [958] Underfull \vbox (badness 10000) has occurred while \output is active [959] Package longtable Warning: Column widths have changed (longtable) in table 47.431 on input line 1236. [960] [961] Underfull \vbox (badness 10000) has occurred while \output is active [962] Underfull \vbox (badness 10000) has occurred while \output is active [963] Underfull \vbox (badness 10000) has occurred while \output is active [964] Underfull \vbox (badness 10000) has occurred while \output is active [965] Underfull \vbox (badness 10000) has occurred while \output is active [966] Underfull \vbox (badness 10000) has occurred while \output is active [967] Underfull \vbox (badness 10000) has occurred while \output is active [968] Underfull \vbox (badness 10000) has occurred while \output is active [969] Package longtable Warning: Column widths have changed (longtable) in table 47.432 on input line 1992. [970] Package longtable Warning: Column widths have changed (longtable) in table 47.433 on input line 2076. [971] [972] Underfull \vbox (badness 10000) has occurred while \output is active [973] Underfull \vbox (badness 10000) has occurred while \output is active [974] Underfull \vbox (badness 10000) has occurred while \output is active [975] Underfull \vbox (badness 10000) has occurred while \output is active [976] Underfull \vbox (badness 10000) has occurred while \output is active [977] Underfull \vbox (badness 10000) has occurred while \output is active [978] [979] Package longtable Warning: Column widths have changed (longtable) in table 47.434 on input line 2714. [980] [981] Package longtable Warning: Column widths have changed (longtable) in table 47.435 on input line 2845. [982] Package longtable Warning: Column widths have changed (longtable) in table 47.436 on input line 2968. Overfull \vbox (4.22563pt too high) has occurred while \output is active [983] [984] Package longtable Warning: Column widths have changed (longtable) in table 47.437 on input line 3053. [985] Package longtable Warning: Column widths have changed (longtable) in table 47.438 on input line 3136. [986] Underfull \vbox (badness 10000) has occurred while \output is active [987] Underfull \vbox (badness 10000) has occurred while \output is active [988] Underfull \vbox (badness 10000) has occurred while \output is active [989] Underfull \vbox (badness 10000) has occurred while \output is active [990] Underfull \vbox (badness 10000) has occurred while \output is active [991] Underfull \vbox (badness 10000) has occurred while \output is active [992] Underfull \vbox (badness 10000) has occurred while \output is active [993] Underfull \vbox (badness 10000) has occurred while \output is active [994] Underfull \vbox (badness 10000) has occurred while \output is active [995] Underfull \vbox (badness 10000) has occurred while \output is active [996] Underfull \vbox (badness 10000) has occurred while \output is active [997]) (./namespacemom__diag__manager__wrapper.tex [998] Underfull \hbox (badness 2626) in paragraph at lines 18--19 []\T1/phv/m/n/10 integer func-tion [][]register[]_[]diag[]_[]field[]_[]scalar[] _[]fms[][] (module[]_[]name, field[]_[]name, init[]_[]time, long[]_[]name, unit s, [999] Package longtable Warning: Column widths have changed (longtable) in table 47.439 on input line 69. [1000] Package longtable Warning: Column widths have changed (longtable) in table 47.440 on input line 152. [1001]) (./namespacemom__diag__mediator.tex [1002] [1003] [1004] [1005] [1006] Package longtable Warning: Column widths have changed (longtable) in table 47.441 on input line 246. [1007] Package longtable Warning: Column widths have changed (longtable) in table 47.442 on input line 299. [1008] Package longtable Warning: Column widths have changed (longtable) in table 47.443 on input line 387. [1009] Package longtable Warning: Column widths have changed (longtable) in table 47.444 on input line 439. [1010] Underfull \vbox (badness 10000) has occurred while \output is active [1011] Package longtable Warning: Column widths have changed (longtable) in table 47.445 on input line 614. [1012] [1013] [1014] Package longtable Warning: Column widths have changed (longtable) in table 47.446 on input line 780. [1015] Underfull \vbox (badness 10000) has occurred while \output is active [1016] Package longtable Warning: Column widths have changed (longtable) in table 47.447 on input line 941. [1017] Package longtable Warning: Column widths have changed (longtable) in table 47.448 on input line 976. [1018] Package longtable Warning: Column widths have changed (longtable) in table 47.449 on input line 1020. Package longtable Warning: Column widths have changed (longtable) in table 47.450 on input line 1060. [1019] Package longtable Warning: Column widths have changed (longtable) in table 47.451 on input line 1097. Package longtable Warning: Column widths have changed (longtable) in table 47.452 on input line 1123. [1020] Package longtable Warning: Column widths have changed (longtable) in table 47.453 on input line 1165. Package longtable Warning: Column widths have changed (longtable) in table 47.454 on input line 1214. Overfull \vbox (19.73378pt too high) has occurred while \output is active [1021] Package longtable Warning: Column widths have changed (longtable) in table 47.455 on input line 1271. [1022] Package longtable Warning: Column widths have changed (longtable) in table 47.456 on input line 1305. [1023] Package longtable Warning: Column widths have changed (longtable) in table 47.457 on input line 1375. Package longtable Warning: Column widths have changed (longtable) in table 47.458 on input line 1413. Underfull \vbox (badness 10000) has occurred while \output is active [1024] [1025] Underfull \vbox (badness 10000) has occurred while \output is active [1026] Package longtable Warning: Column widths have changed (longtable) in table 47.459 on input line 1645. Underfull \vbox (badness 10000) has occurred while \output is active [1027] Package longtable Warning: Column widths have changed (longtable) in table 47.460 on input line 1692. [1028] Package longtable Warning: Column widths have changed (longtable) in table 47.461 on input line 1727. Package longtable Warning: Column widths have changed (longtable) in table 47.462 on input line 1769. [1029] Underfull \hbox (badness 10000) detected at line 1799 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.463 on input line 1816. [1030] [1031] Package longtable Warning: Column widths have changed (longtable) in table 47.464 on input line 1922. Package longtable Warning: Column widths have changed (longtable) in table 47.465 on input line 1967. Underfull \vbox (badness 10000) has occurred while \output is active [1032] Package longtable Warning: Column widths have changed (longtable) in table 47.466 on input line 2042. [1033] [1034] Package longtable Warning: Column widths have changed (longtable) in table 47.467 on input line 2113. [1035] Package longtable Warning: Column widths have changed (longtable) in table 47.468 on input line 2209. [1036] Package longtable Warning: Column widths have changed (longtable) in table 47.469 on input line 2309. [1037] [1038] Underfull \vbox (badness 10000) has occurred while \output is active [1039] [1040] Package longtable Warning: Column widths have changed (longtable) in table 47.470 on input line 2526. Overfull \hbox (36.1684pt too wide) in paragraph at lines 2562--2562 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [1041] Underfull \vbox (badness 10000) has occurred while \output is active [1042] Package longtable Warning: Column widths have changed (longtable) in table 47.471 on input line 2726. [1043] [1044] Package longtable Warning: Column widths have changed (longtable) in table 47.472 on input line 2800. [1045] Package longtable Warning: Column widths have changed (longtable) in table 47.473 on input line 2857. Package longtable Warning: Column widths have changed (longtable) in table 47.474 on input line 2899. [1046] Package longtable Warning: Column widths have changed (longtable) in table 47.475 on input line 2932. Package longtable Warning: Column widths have changed (longtable) in table 47.476 on input line 2960. [1047] Package longtable Warning: Column widths have changed (longtable) in table 47.477 on input line 3011. Underfull \hbox (badness 10000) detected at line 3012 [][][] [1048] Package longtable Warning: Column widths have changed (longtable) in table 47.478 on input line 3054. Package longtable Warning: Column widths have changed (longtable) in table 47.479 on input line 3100. Overfull \vbox (7.75447pt too high) has occurred while \output is active [1049] Package longtable Warning: Column widths have changed (longtable) in table 47.480 on input line 3156. [1050] Underfull \hbox (badness 10000) detected at line 3181 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.481 on input line 3194. [1051] [1052] Package longtable Warning: Column widths have changed (longtable) in table 47.482 on input line 3322. [1053] Package longtable Warning: Column widths have changed (longtable) in table 47.483 on input line 3386. [1054] Package longtable Warning: Column widths have changed (longtable) in table 47.484 on input line 3466. [1055] Package longtable Warning: Column widths have changed (longtable) in table 47.485 on input line 3518. [1056] Underfull \vbox (badness 10000) has occurred while \output is active [1057] Package longtable Warning: Column widths have changed (longtable) in table 47.486 on input line 3691. [1058] Underfull \vbox (badness 10000) has occurred while \output is active [1059] Package longtable Warning: Column widths have changed (longtable) in table 47.487 on input line 3839. [1060] Underfull \vbox (badness 10000) has occurred while \output is active [1061] Package longtable Warning: Column widths have changed (longtable) in table 47.488 on input line 4034. Overfull \vbox (24.95552pt too high) has occurred while \output is active [1062] Package longtable Warning: Column widths have changed (longtable) in table 47.489 on input line 4110. Overfull \vbox (24.2831pt too high) has occurred while \output is active [1063] Package longtable Warning: Column widths have changed (longtable) in table 47.490 on input line 4144. [1064] Package longtable Warning: Column widths have changed (longtable) in table 47.491 on input line 4225. [1065] [1066] Underfull \vbox (badness 10000) has occurred while \output is active [1067] Underfull \vbox (badness 10000) has occurred while \output is active [1068] Package longtable Warning: Column widths have changed (longtable) in table 47.492 on input line 4514. Overfull \vbox (10.18648pt too high) has occurred while \output is active [1069] [1070] [1071] Package longtable Warning: Column widths have changed (longtable) in table 47.493 on input line 4684. [1072] Underfull \vbox (badness 10000) has occurred while \output is active [1073] [1074] Underfull \hbox (badness 10000) detected at line 4862 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.494 on input line 4899. [1075] Underfull \vbox (badness 10000) has occurred while \output is active [1076] Underfull \hbox (badness 10000) detected at line 5014 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.495 on input line 5061. [1077] [1078] Underfull \vbox (badness 10000) has occurred while \output is active [1079] Package longtable Warning: Column widths have changed (longtable) in table 47.496 on input line 5234. [1080] Underfull \vbox (badness 10000) has occurred while \output is active [1081] Underfull \vbox (badness 10000) has occurred while \output is active [1082] Package longtable Warning: Column widths have changed (longtable) in table 47.497 on input line 5502. [1083] [1084] Underfull \vbox (badness 10000) has occurred while \output is active [1085] Package longtable Warning: Column widths have changed (longtable) in table 47.498 on input line 5707. [1086] Package longtable Warning: Column widths have changed (longtable) in table 47.499 on input line 5739. [1087] Package longtable Warning: Column widths have changed (longtable) in table 47.500 on input line 5854. [1088]) (./namespacemom__diag__remap.tex [1089] [1090] Package longtable Warning: Column widths have changed (longtable) in table 47.501 on input line 66. Package longtable Warning: Column widths have changed (longtable) in table 47.502 on input line 97. Overfull \vbox (15.70502pt too high) has occurred while \output is active [1091] Package longtable Warning: Column widths have changed (longtable) in table 47.503 on input line 165. Underfull \vbox (badness 10000) has occurred while \output is active [1092] [1093] Package longtable Warning: Column widths have changed (longtable) in table 47.504 on input line 241. Package longtable Warning: Column widths have changed (longtable) in table 47.505 on input line 285. [1094] Underfull \vbox (badness 10000) has occurred while \output is active [1095] Package longtable Warning: Column widths have changed (longtable) in table 47.506 on input line 398. Package longtable Warning: Column widths have changed (longtable) in table 47.507 on input line 434. Overfull \vbox (2.68217pt too high) has occurred while \output is active [1096] Package longtable Warning: Column widths have changed (longtable) in table 47.508 on input line 469. [1097] Package longtable Warning: Column widths have changed (longtable) in table 47.509 on input line 511. Underfull \hbox (badness 10000) detected at line 533 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.510 on input line 556. Overfull \vbox (57.59293pt too high) has occurred while \output is active [1098] [1099] Package longtable Warning: Column widths have changed (longtable) in table 47.511 on input line 667. [1100] Underfull \vbox (badness 10000) has occurred while \output is active [1101] Package longtable Warning: Column widths have changed (longtable) in table 47.512 on input line 845. Overfull \vbox (13.8649pt too high) has occurred while \output is active [1102] [1103] Package longtable Warning: Column widths have changed (longtable) in table 47.513 on input line 960. [1104]) (./namespacemom__diag__vkernels.tex [1105] Package longtable Warning: Column widths have changed (longtable) in table 47.514 on input line 36. [1106] [1107] Package longtable Warning: Column widths have changed (longtable) in table 47.515 on input line 179. [1108] Package longtable Warning: Column widths have changed (longtable) in table 47.516 on input line 284. [1109] [1110] Package longtable Warning: Column widths have changed (longtable) in table 47.517 on input line 395. [1111] Package longtable Warning: Column widths have changed (longtable) in table 47.518 on input line 468. [1112]) (./namespacemom__diagnostics.tex [1113] Package longtable Warning: Column widths have changed (longtable) in table 47.519 on input line 69. [1114] Package longtable Warning: Column widths have changed (longtable) in table 47.520 on input line 149. [1115] [1116] Underfull \vbox (badness 10000) has occurred while \output is active [1117] Underfull \vbox (badness 10000) has occurred while \output is active [1118] Underfull \vbox (badness 10000) has occurred while \output is active [1119] Underfull \vbox (badness 10000) has occurred while \output is active [1120] Underfull \vbox (badness 10000) has occurred while \output is active [1121] Underfull \vbox (badness 10000) has occurred while \output is active [1122] Package longtable Warning: Column widths have changed (longtable) in table 47.521 on input line 756. Underfull \vbox (badness 10000) has occurred while \output is active [1123] [1124] Underfull \vbox (badness 10000) has occurred while \output is active [1125] Package longtable Warning: Column widths have changed (longtable) in table 47.522 on input line 992. [1126] [1127] [1128] Package longtable Warning: Column widths have changed (longtable) in table 47.523 on input line 1137. [1129] Package longtable Warning: Column widths have changed (longtable) in table 47.524 on input line 1222. [1130] Package longtable Warning: Column widths have changed (longtable) in table 47.525 on input line 1305. [1131] Underfull \vbox (badness 10000) has occurred while \output is active [1132] Underfull \vbox (badness 10000) has occurred while \output is active [1133] Underfull \vbox (badness 10000) has occurred while \output is active [1134] Underfull \vbox (badness 10000) has occurred while \output is active [1135] Package longtable Warning: Column widths have changed (longtable) in table 47.526 on input line 1717. [1136] Package longtable Warning: Column widths have changed (longtable) in table 47.527 on input line 1788. Overfull \vbox (29.00815pt too high) has occurred while \output is active [1137] [1138] [1139] Package longtable Warning: Column widths have changed (longtable) in table 47.528 on input line 1968. [1140] Package longtable Warning: Column widths have changed (longtable) in table 47.529 on input line 2085. [1141] [1142] Package longtable Warning: Column widths have changed (longtable) in table 47.530 on input line 2187. [1143] Package longtable Warning: Column widths have changed (longtable) in table 47.531 on input line 2254. [1144] Overfull \hbox (18.47548pt too wide) in alignment at lines 2331--2331 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.532 on input line 2331. [1145] Package longtable Warning: Column widths have changed (longtable) in table 47.533 on input line 2416. [1146] Underfull \vbox (badness 10000) has occurred while \output is active [1147] Underfull \vbox (badness 10000) has occurred while \output is active [1148]) (./namespacemom__diapyc__energy__req.tex [1149] Package longtable Warning: Column widths have changed (longtable) in table 47.534 on input line 65. [1150] Underfull \vbox (badness 10000) has occurred while \output is active [1151] Underfull \vbox (badness 10000) has occurred while \output is active [1152] Underfull \vbox (badness 10000) has occurred while \output is active [1153] Underfull \vbox (badness 10000) has occurred while \output is active [1154] Underfull \vbox (badness 10000) has occurred while \output is active [1155] Underfull \vbox (badness 10000) has occurred while \output is active [1156] Underfull \vbox (badness 10000) has occurred while \output is active [1157] Underfull \vbox (badness 10000) has occurred while \output is active [1158] Underfull \vbox (badness 10000) has occurred while \output is active [1159] Underfull \vbox (badness 10000) has occurred while \output is active [1160] Package longtable Warning: Column widths have changed (longtable) in table 47.535 on input line 933. [1161] Package longtable Warning: Column widths have changed (longtable) in table 47.536 on input line 970. [1162] Package longtable Warning: Column widths have changed (longtable) in table 47.537 on input line 1084. [1163] [1164] Package longtable Warning: Column widths have changed (longtable) in table 47.538 on input line 1212. [1165] [1166] Underfull \vbox (badness 10000) has occurred while \output is active [1167] [1168] Package longtable Warning: Column widths have changed (longtable) in table 47.539 on input line 1418. Underfull \vbox (badness 10000) has occurred while \output is active [1169] [1170]) (./namespacemom__document.tex [1171] [1172] [1173] Package longtable Warning: Column widths have changed (longtable) in table 47.540 on input line 110. Package longtable Warning: Column widths have changed (longtable) in table 47.541 on input line 151. Underfull \vbox (badness 10000) has occurred while \output is active [1174] Package longtable Warning: Column widths have changed (longtable) in table 47.542 on input line 195. [1175] Package longtable Warning: Column widths have changed (longtable) in table 47.543 on input line 257. [1176] Package longtable Warning: Column widths have changed (longtable) in table 47.544 on input line 298. [1177] Package longtable Warning: Column widths have changed (longtable) in table 47.545 on input line 359. [1178] Package longtable Warning: Column widths have changed (longtable) in table 47.546 on input line 423. Package longtable Warning: Column widths have changed (longtable) in table 47.547 on input line 482. Overfull \vbox (57.30919pt too high) has occurred while \output is active [1179] Package longtable Warning: Column widths have changed (longtable) in table 47.548 on input line 554. [1180] [1181] Package longtable Warning: Column widths have changed (longtable) in table 47.549 on input line 626. [1182] Package longtable Warning: Column widths have changed (longtable) in table 47.550 on input line 705. [1183] Package longtable Warning: Column widths have changed (longtable) in table 47.551 on input line 783. [1184] Package longtable Warning: Column widths have changed (longtable) in table 47.552 on input line 859. [1185] Package longtable Warning: Column widths have changed (longtable) in table 47.553 on input line 915. [1186] Package longtable Warning: Column widths have changed (longtable) in table 47.554 on input line 983. [1187] Package longtable Warning: Column widths have changed (longtable) in table 47.555 on input line 1055. [1188] Package longtable Warning: Column widths have changed (longtable) in table 47.556 on input line 1123. [1189] Package longtable Warning: Column widths have changed (longtable) in table 47.557 on input line 1154. Package longtable Warning: Column widths have changed (longtable) in table 47.558 on input line 1181. [1190] Package longtable Warning: Column widths have changed (longtable) in table 47.559 on input line 1212. [1191] Package longtable Warning: Column widths have changed (longtable) in table 47.560 on input line 1277. [1192] Underfull \hbox (badness 10000) detected at line 1389 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.561 on input line 1398. [1193] Package longtable Warning: Column widths have changed (longtable) in table 47.562 on input line 1458. [1194] Package longtable Warning: Column widths have changed (longtable) in table 47.563 on input line 1530. [1195] Package longtable Warning: Column widths have changed (longtable) in table 47.564 on input line 1564. Package longtable Warning: Column widths have changed (longtable) in table 47.565 on input line 1605. [1196] Package longtable Warning: Column widths have changed (longtable) in table 47.566 on input line 1656. [1197] Underfull \vbox (badness 10000) has occurred while \output is active [1198]) (./namespacemom__domains.tex [1199] [1200] [1201] Package longtable Warning: Column widths have changed (longtable) in table 47.567 on input line 123. [1202] Package longtable Warning: Column widths have changed (longtable) in table 47.568 on input line 229. [1203] Underfull \vbox (badness 10000) has occurred while \output is active [1204] Package longtable Warning: Column widths have changed (longtable) in table 47.569 on input line 378. [1205] Package longtable Warning: Column widths have changed (longtable) in table 47.570 on input line 428. [1206] Package longtable Warning: Column widths have changed (longtable) in table 47.571 on input line 502. Overfull \vbox (1.22655pt too high) has occurred while \output is active [1207] Package longtable Warning: Column widths have changed (longtable) in table 47.572 on input line 578. [1208] [1209] Package longtable Warning: Column widths have changed (longtable) in table 47.573 on input line 665. [1210] Package longtable Warning: Column widths have changed (longtable) in table 47.574 on input line 743. [1211] Package longtable Warning: Column widths have changed (longtable) in table 47.575 on input line 791. [1212] [1213] Package longtable Warning: Column widths have changed (longtable) in table 47.576 on input line 926. [1214] [1215] Package longtable Warning: Column widths have changed (longtable) in table 47.577 on input line 1021. [1216] Package longtable Warning: Column widths have changed (longtable) in table 47.578 on input line 1070. Package longtable Warning: Column widths have changed (longtable) in table 47.579 on input line 1107. [1217] Package longtable Warning: Column widths have changed (longtable) in table 47.580 on input line 1168. [1218] Package longtable Warning: Column widths have changed (longtable) in table 47.581 on input line 1247. [1219] [1220] Underfull \vbox (badness 10000) has occurred while \output is active [1221] Underfull \vbox (badness 10000) has occurred while \output is active [1222] Underfull \vbox (badness 10000) has occurred while \output is active [1223] Underfull \vbox (badness 10000) has occurred while \output is active [1224] Package longtable Warning: Column widths have changed (longtable) in table 47.582 on input line 1708. [1225] [1226] [1227] Package longtable Warning: Column widths have changed (longtable) in table 47.583 on input line 1857. [1228] Package longtable Warning: Column widths have changed (longtable) in table 47.584 on input line 1933. [1229] Package longtable Warning: Column widths have changed (longtable) in table 47.585 on input line 2005. [1230] Package longtable Warning: Column widths have changed (longtable) in table 47.586 on input line 2077. [1231] Underfull \hbox (badness 10000) detected at line 2078 [][][] [1232] Package longtable Warning: Column widths have changed (longtable) in table 47.587 on input line 2154. Underfull \hbox (badness 10000) detected at line 2155 [][][] [1233] Package longtable Warning: Column widths have changed (longtable) in table 47.588 on input line 2233. [1234] Package longtable Warning: Column widths have changed (longtable) in table 47.589 on input line 2321. [1235] [1236] Package longtable Warning: Column widths have changed (longtable) in table 47.590 on input line 2409. [1237] Package longtable Warning: Column widths have changed (longtable) in table 47.591 on input line 2493. [1238] [1239] Package longtable Warning: Column widths have changed (longtable) in table 47.592 on input line 2577. Underfull \hbox (badness 10000) detected at line 2578 [][][] [1240] Package longtable Warning: Column widths have changed (longtable) in table 47.593 on input line 2667. [1241] Underfull \hbox (badness 10000) detected at line 2668 [][][] [1242] Package longtable Warning: Column widths have changed (longtable) in table 47.594 on input line 2746. ) (./namespacemom__dyn__horgrid.tex [1243] Package longtable Warning: Column widths have changed (longtable) in table 47.595 on input line 41. Underfull \hbox (badness 10000) detected at line 42 [][][] [1244] Package longtable Warning: Column widths have changed (longtable) in table 47.596 on input line 74. [1245] Package longtable Warning: Column widths have changed (longtable) in table 47.597 on input line 200. [1246] Package longtable Warning: Column widths have changed (longtable) in table 47.598 on input line 268. [1247] Package longtable Warning: Column widths have changed (longtable) in table 47.599 on input line 320. [1248]) (./namespacemom__dynamics__split__rk2.tex [1249] Package longtable Warning: Column widths have changed (longtable) in table 47.600 on input line 84. Underfull \vbox (badness 10000) has occurred while \output is active [1250] Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), target Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(inout), target [1251] [1252] Package longtable Warning: Column widths have changed (longtable) in table 47.601 on input line 182. [1253] Underfull \vbox (badness 10000) has occurred while \output is active [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] Underfull \vbox (badness 10000) has occurred while \output is active [1257] Package longtable Warning: Column widths have changed (longtable) in table 47.602 on input line 592. Underfull \vbox (badness 10000) has occurred while \output is active [1258] [1259] Package longtable Warning: Column widths have changed (longtable) in table 47.603 on input line 729. [1260] [1261] Underfull \vbox (badness 10000) has occurred while \output is active [1262] Underfull \vbox (badness 10000) has occurred while \output is active [1263] Underfull \vbox (badness 10000) has occurred while \output is active [1264] Underfull \vbox (badness 10000) has occurred while \output is active [1265] Underfull \vbox (badness 10000) has occurred while \output is active [1266] Underfull \vbox (badness 10000) has occurred while \output is active [1267] Underfull \vbox (badness 10000) has occurred while \output is active [1268] Underfull \vbox (badness 10000) has occurred while \output is active [1269]) (./namespacemom__dynamics__unsplit.tex [1270] [1271] Package longtable Warning: Column widths have changed (longtable) in table 47.604 on input line 68. Package longtable Warning: Column widths have changed (longtable) in table 47.605 on input line 142. [1272] [1273] Underfull \vbox (badness 10000) has occurred while \output is active [1274] Package longtable Warning: Column widths have changed (longtable) in table 47.606 on input line 319. [1275] [1276] [1277] Package longtable Warning: Column widths have changed (longtable) in table 47.607 on input line 418. [1278] Underfull \vbox (badness 10000) has occurred while \output is active [1279] Underfull \vbox (badness 10000) has occurred while \output is active [1280] Underfull \vbox (badness 10000) has occurred while \output is active [1281]) (./namespacemom__dynamics__unsplit__rk2.tex [1282] [1283] Package longtable Warning: Column widths have changed (longtable) in table 47.608 on input line 68. Package longtable Warning: Column widths have changed (longtable) in table 47.609 on input line 142. [1284] [1285] Underfull \vbox (badness 10000) has occurred while \output is active [1286] Package longtable Warning: Column widths have changed (longtable) in table 47.610 on input line 329. Overfull \vbox (34.51509pt too high) has occurred while \output is active [1287] [1288] Package longtable Warning: Column widths have changed (longtable) in table 47.611 on input line 429. [1289] Underfull \vbox (badness 10000) has occurred while \output is active [1290] Underfull \vbox (badness 10000) has occurred while \output is active [1291] Underfull \vbox (badness 10000) has occurred while \output is active [1292]) (./namespaceMOM__energetic__PBL.tex) (./namespacemom__energetic__pbl.tex [1293] [1294] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] [1295] Package longtable Warning: Column widths have changed (longtable) in table 47.612 on input line 136. [1296] Underfull \vbox (badness 10000) has occurred while \output is active [1297] Underfull \vbox (badness 10000) has occurred while \output is active [1298] Underfull \vbox (badness 10000) has occurred while \output is active [1299] Package longtable Warning: Column widths have changed (longtable) in table 47.613 on input line 448. [1300] Package longtable Warning: Column widths have changed (longtable) in table 47.614 on input line 511. [1301] Package longtable Warning: Column widths have changed (longtable) in table 47.615 on input line 562. [1302] Underfull \vbox (badness 10000) has occurred while \output is active [1303] Underfull \vbox (badness 10000) has occurred while \output is active [1304] Underfull \vbox (badness 10000) has occurred while \output is active [1305] Underfull \vbox (badness 10000) has occurred while \output is active [1306] Underfull \vbox (badness 10000) has occurred while \output is active [1307] Package longtable Warning: Column widths have changed (longtable) in table 47.616 on input line 1085. [1308] [1309] Underfull \vbox (badness 10000) has occurred while \output is active [1310] Underfull \vbox (badness 10000) has occurred while \output is active [1311] Underfull \vbox (badness 10000) has occurred while \output is active [1312] Underfull \vbox (badness 10000) has occurred while \output is active [1313] Underfull \vbox (badness 10000) has occurred while \output is active [1314] Underfull \vbox (badness 10000) has occurred while \output is active [1315] Underfull \vbox (badness 10000) has occurred while \output is active [1316] Underfull \vbox (badness 10000) has occurred while \output is active [1317] Underfull \vbox (badness 10000) has occurred while \output is active [1318] Underfull \vbox (badness 10000) has occurred while \output is active [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] Package longtable Warning: Column widths have changed (longtable) in table 47.617 on input line 2056. [1321] Underfull \vbox (badness 10000) has occurred while \output is active [1322] Package longtable Warning: Column widths have changed (longtable) in table 47.618 on input line 2205. [1323] [1324] Underfull \vbox (badness 10000) has occurred while \output is active [1325] [1326] Package longtable Warning: Column widths have changed (longtable) in table 47.619 on input line 2407. [1327] [1328] Underfull \vbox (badness 10000) has occurred while \output is active [1329] Package longtable Warning: Column widths have changed (longtable) in table 47.620 on input line 2593. [1330] [1331] [1332] [1333]) (./namespacemom__entrain__diffusive.tex [1334] [1335] Package longtable Warning: Column widths have changed (longtable) in table 47.621 on input line 85. Underfull \vbox (badness 10000) has occurred while \output is active [1336] [1337] Underfull \vbox (badness 10000) has occurred while \output is active [1338] [1339] Package longtable Warning: Column widths have changed (longtable) in table 47.622 on input line 381. [1340] [1341] Underfull \vbox (badness 10000) has occurred while \output is active [1342] [1343] Package longtable Warning: Column widths have changed (longtable) in table 47.623 on input line 609. Package longtable Warning: Column widths have changed (longtable) in table 47.624 on input line 649. [1344] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 integer, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), inten t(inout), optional \T1/pcr/m/sl/8 kb[]_[] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 Kd[]_[][] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in), optional [1345] Package longtable Warning: Column widths have changed (longtable) in table 47.625 on input line 757. [1346] Underfull \vbox (badness 10000) has occurred while \output is active [1347] Underfull \vbox (badness 10000) has occurred while \output is active [1348] Underfull \vbox (badness 10000) has occurred while \output is active [1349] Underfull \vbox (badness 10000) has occurred while \output is active [1350] Underfull \vbox (badness 10000) has occurred while \output is active [1351] Underfull \vbox (badness 10000) has occurred while \output is active [1352] Underfull \vbox (badness 10000) has occurred while \output is active [1353] Underfull \vbox (badness 10000) has occurred while \output is active [1354] Underfull \vbox (badness 10000) has occurred while \output is active [1355] Underfull \vbox (badness 10000) has occurred while \output is active [1356] Package longtable Warning: Column widths have changed (longtable) in table 47.626 on input line 1638. [1357] Underfull \vbox (badness 10000) has occurred while \output is active [1358] Package longtable Warning: Column widths have changed (longtable) in table 47.627 on input line 1810. [1359] [1360] [1361] Package longtable Warning: Column widths have changed (longtable) in table 47.628 on input line 1989. [1362] Underfull \vbox (badness 10000) has occurred while \output is active [1363] Underfull \vbox (badness 10000) has occurred while \output is active [1364] Underfull \vbox (badness 10000) has occurred while \output is active [1365] [1366] Package longtable Warning: Column widths have changed (longtable) in table 47.629 on input line 2328. [1367] Underfull \vbox (badness 10000) has occurred while \output is active [1368]) (./namespacemom__eos.tex [1369] [1370] [1371] [1372] Package longtable Warning: Column widths have changed (longtable) in table 47.630 on input line 198. Underfull \vbox (badness 10000) has occurred while \output is active [1373] [1374] Package longtable Warning: Column widths have changed (longtable) in table 47.631 on input line 326. [1375] [1376] Package longtable Warning: Column widths have changed (longtable) in table 47.632 on input line 425. [1377] Package longtable Warning: Column widths have changed (longtable) in table 47.633 on input line 513. [1378] Package longtable Warning: Column widths have changed (longtable) in table 47.634 on input line 592. [1379] Package longtable Warning: Column widths have changed (longtable) in table 47.635 on input line 662. Overfull \vbox (21.86925pt too high) has occurred while \output is active [1380] Package longtable Warning: Column widths have changed (longtable) in table 47.636 on input line 738. [1381] Package longtable Warning: Column widths have changed (longtable) in table 47.637 on input line 792. Overfull \vbox (45.78584pt too high) has occurred while \output is active [1382] [1383] Package longtable Warning: Column widths have changed (longtable) in table 47.638 on input line 880. [1384] Package longtable Warning: Column widths have changed (longtable) in table 47.639 on input line 953. [1385] Package longtable Warning: Column widths have changed (longtable) in table 47.640 on input line 1035. [1386] Package longtable Warning: Column widths have changed (longtable) in table 47.641 on input line 1110. [1387] Package longtable Warning: Column widths have changed (longtable) in table 47.642 on input line 1183. [1388] Package longtable Warning: Column widths have changed (longtable) in table 47.643 on input line 1265. [1389] [1390] Package longtable Warning: Column widths have changed (longtable) in table 47.644 on input line 1387. [1391] [1392] Package longtable Warning: Column widths have changed (longtable) in table 47.645 on input line 1481. [1393] Package longtable Warning: Column widths have changed (longtable) in table 47.646 on input line 1559. [1394] Package longtable Warning: Column widths have changed (longtable) in table 47.647 on input line 1648. [1395] [1396] Package longtable Warning: Column widths have changed (longtable) in table 47.648 on input line 1759. [1397] [1398] Package longtable Warning: Column widths have changed (longtable) in table 47.649 on input line 1850. [1399] Package longtable Warning: Column widths have changed (longtable) in table 47.650 on input line 1932. [1400] Package longtable Warning: Column widths have changed (longtable) in table 47.651 on input line 2008. [1401] Package longtable Warning: Column widths have changed (longtable) in table 47.652 on input line 2067. [1402] [1403] Package longtable Warning: Column widths have changed (longtable) in table 47.653 on input line 2118. Package longtable Warning: Column widths have changed (longtable) in table 47.654 on input line 2145. Underfull \hbox (badness 10000) detected at line 2146 [][][] [1404] [1405] Package longtable Warning: Column widths have changed (longtable) in table 47.655 on input line 2183. Package longtable Warning: Column widths have changed (longtable) in table 47.656 on input line 2212. [1406] [1407] Package longtable Warning: Column widths have changed (longtable) in table 47.657 on input line 2358. [1408] Package longtable Warning: Column widths have changed (longtable) in table 47.658 on input line 2409. Underfull \hbox (badness 10000) detected at line 2431 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.659 on input line 2446. Overfull \vbox (47.24054pt too high) has occurred while \output is active [1409] Package longtable Warning: Column widths have changed (longtable) in table 47.660 on input line 2507. Underfull \vbox (badness 10000) has occurred while \output is active [1410] Package longtable Warning: Column widths have changed (longtable) in table 47.661 on input line 2558. ) (./namespacemom__eos__linear.tex [1411] [1412] Package longtable Warning: Column widths have changed (longtable) in table 47.662 on input line 79. Overfull \vbox (1.44406pt too high) has occurred while \output is active [1413] Package longtable Warning: Column widths have changed (longtable) in table 47.663 on input line 141. Underfull \vbox (badness 10000) has occurred while \output is active [1414] Package longtable Warning: Column widths have changed (longtable) in table 47.664 on input line 202. Underfull \vbox (badness 10000) has occurred while \output is active [1415] Package longtable Warning: Column widths have changed (longtable) in table 47.665 on input line 261. [1416] Package longtable Warning: Column widths have changed (longtable) in table 47.666 on input line 311. [1417] Package longtable Warning: Column widths have changed (longtable) in table 47.667 on input line 368. [1418] Package longtable Warning: Column widths have changed (longtable) in table 47.668 on input line 429. [1419] Package longtable Warning: Column widths have changed (longtable) in table 47.669 on input line 489. [1420] Package longtable Warning: Column widths have changed (longtable) in table 47.670 on input line 547. [1421] Package longtable Warning: Column widths have changed (longtable) in table 47.671 on input line 606. [1422] Package longtable Warning: Column widths have changed (longtable) in table 47.672 on input line 688. [1423] [1424] Underfull \vbox (badness 10000) has occurred while \output is active [1425] [1426] Package longtable Warning: Column widths have changed (longtable) in table 47.673 on input line 906. [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428]) (./namespacemom__eos__nemo.tex [1429] [1430] [1431] [1432] [1433] [1434] [1435] Package longtable Warning: Column widths have changed (longtable) in table 47.674 on input line 461. [1436] Package longtable Warning: Column widths have changed (longtable) in table 47.675 on input line 521. [1437] [1438] Package longtable Warning: Column widths have changed (longtable) in table 47.676 on input line 612. [1439] Package longtable Warning: Column widths have changed (longtable) in table 47.677 on input line 712. [1440] Package longtable Warning: Column widths have changed (longtable) in table 47.678 on input line 762. ) (./namespacemom__eos__teos10.tex [1441] [1442] Package longtable Warning: Column widths have changed (longtable) in table 47.679 on input line 75. [1443] Package longtable Warning: Column widths have changed (longtable) in table 47.680 on input line 135. [1444] Package longtable Warning: Column widths have changed (longtable) in table 47.681 on input line 194. [1445] Package longtable Warning: Column widths have changed (longtable) in table 47.682 on input line 251. [1446] Package longtable Warning: Column widths have changed (longtable) in table 47.683 on input line 297. Package longtable Warning: Column widths have changed (longtable) in table 47.684 on input line 354. Overfull \vbox (69.66199pt too high) has occurred while \output is active [1447] Package longtable Warning: Column widths have changed (longtable) in table 47.685 on input line 420. Underfull \vbox (badness 10000) has occurred while \output is active [1448] Package longtable Warning: Column widths have changed (longtable) in table 47.686 on input line 474. [1449] Package longtable Warning: Column widths have changed (longtable) in table 47.687 on input line 531. [1450] Package longtable Warning: Column widths have changed (longtable) in table 47.688 on input line 578. ) (./namespacemom__eos__unesco.tex [1451] [1452] [1453] [1454] Package longtable Warning: Column widths have changed (longtable) in table 47.689 on input line 185. [1455] Package longtable Warning: Column widths have changed (longtable) in table 47.690 on input line 271. [1456] Package longtable Warning: Column widths have changed (longtable) in table 47.691 on input line 353. [1457] Package longtable Warning: Column widths have changed (longtable) in table 47.692 on input line 448. Overfull \vbox (42.16423pt too high) has occurred while \output is active [1458] Package longtable Warning: Column widths have changed (longtable) in table 47.693 on input line 499. [1459] Package longtable Warning: Column widths have changed (longtable) in table 47.694 on input line 577. Overfull \vbox (6.26321pt too high) has occurred while \output is active [1460]) (./namespacemom__eos__wright.tex [1461] [1462] Package longtable Warning: Column widths have changed (longtable) in table 47.695 on input line 123. Overfull \vbox (34.43738pt too high) has occurred while \output is active [1463] Package longtable Warning: Column widths have changed (longtable) in table 47.696 on input line 181. [1464] Package longtable Warning: Column widths have changed (longtable) in table 47.697 on input line 247. [1465] Package longtable Warning: Column widths have changed (longtable) in table 47.698 on input line 307. [1466] Package longtable Warning: Column widths have changed (longtable) in table 47.699 on input line 356. [1467] Package longtable Warning: Column widths have changed (longtable) in table 47.700 on input line 419. [1468] Package longtable Warning: Column widths have changed (longtable) in table 47.701 on input line 504. [1469] Package longtable Warning: Column widths have changed (longtable) in table 47.702 on input line 566. [1470] Package longtable Warning: Column widths have changed (longtable) in table 47.703 on input line 620. [1471] Package longtable Warning: Column widths have changed (longtable) in table 47.704 on input line 667. [1472] Package longtable Warning: Column widths have changed (longtable) in table 47.705 on input line 749. [1473] [1474] Underfull \vbox (badness 10000) has occurred while \output is active [1475] [1476] Package longtable Warning: Column widths have changed (longtable) in table 47.706 on input line 1011. [1477] Underfull \vbox (badness 10000) has occurred while \output is active [1478] Underfull \vbox (badness 10000) has occurred while \output is active [1479]) (./namespacemom__error__handler.tex [1480] Package longtable Warning: Column widths have changed (longtable) in table 47.707 on input line 62. [1481] Package longtable Warning: Column widths have changed (longtable) in table 47.708 on input line 93. Package longtable Warning: Column widths have changed (longtable) in table 47.709 on input line 132. [1482] [1483] Package longtable Warning: Column widths have changed (longtable) in table 47.710 on input line 163. Package longtable Warning: Column widths have changed (longtable) in table 47.711 on input line 207. [1484] Package longtable Warning: Column widths have changed (longtable) in table 47.712 on input line 254. [1485] Package longtable Warning: Column widths have changed (longtable) in table 47.713 on input line 290. Package longtable Warning: Column widths have changed (longtable) in table 47.714 on input line 320. ) (./namespacemom__file__parser.tex [1486] [1487] Underfull \hbox (badness 2065) in paragraph at lines 82--83 []\T1/phv/m/n/10 subroutine [][]log[]_[]param[]_[]int[]_[]array[][] (CS, mod-u- le-name, var-name, value, desc, units, de-fault, layout[]Param, [1488] [1489] Package longtable Warning: Column widths have changed (longtable) in table 47.715 on input line 173. [1490] Package longtable Warning: Column widths have changed (longtable) in table 47.716 on input line 210. [1491] Package longtable Warning: Column widths have changed (longtable) in table 47.717 on input line 332. [1492] Package longtable Warning: Column widths have changed (longtable) in table 47.718 on input line 359. Package longtable Warning: Column widths have changed (longtable) in table 47.719 on input line 397. [1493] Underfull \hbox (badness 10000) detected at line 398 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.720 on input line 450. [1494] Package longtable Warning: Column widths have changed (longtable) in table 47.721 on input line 499. [1495] Package longtable Warning: Column widths have changed (longtable) in table 47.722 on input line 581. [1496] [1497] Package longtable Warning: Column widths have changed (longtable) in table 47.723 on input line 674. [1498] Package longtable Warning: Column widths have changed (longtable) in table 47.724 on input line 760. [1499] [1500] Package longtable Warning: Column widths have changed (longtable) in table 47.725 on input line 846. [1501] Package longtable Warning: Column widths have changed (longtable) in table 47.726 on input line 934. [1502] [1503] Package longtable Warning: Column widths have changed (longtable) in table 47.727 on input line 1027. [1504] Package longtable Warning: Column widths have changed (longtable) in table 47.728 on input line 1122. [1505] [1506] Package longtable Warning: Column widths have changed (longtable) in table 47.729 on input line 1201. [1507] Underfull \vbox (badness 10000) has occurred while \output is active [1508] Underfull \vbox (badness 10000) has occurred while \output is active [1509] Underfull \vbox (badness 10000) has occurred while \output is active [1510] Package longtable Warning: Column widths have changed (longtable) in table 47.730 on input line 1541. [1511] Package longtable Warning: Column widths have changed (longtable) in table 47.731 on input line 1575. Package longtable Warning: Column widths have changed (longtable) in table 47.732 on input line 1620. Overfull \vbox (31.06355pt too high) has occurred while \output is active [1512] Package longtable Warning: Column widths have changed (longtable) in table 47.733 on input line 1690. [1513] [1514] Package longtable Warning: Column widths have changed (longtable) in table 47.734 on input line 1759. [1515] Package longtable Warning: Column widths have changed (longtable) in table 47.735 on input line 1829. [1516] Package longtable Warning: Column widths have changed (longtable) in table 47.736 on input line 1900. [1517] Package longtable Warning: Column widths have changed (longtable) in table 47.737 on input line 1966. [1518] Package longtable Warning: Column widths have changed (longtable) in table 47.738 on input line 2042. [1519] Underfull \vbox (badness 10000) has occurred while \output is active [1520] Package longtable Warning: Column widths have changed (longtable) in table 47.739 on input line 2164. [1521] Package longtable Warning: Column widths have changed (longtable) in table 47.740 on input line 2213. Package longtable Warning: Column widths have changed (longtable) in table 47.741 on input line 2253. Underfull \vbox (badness 10000) has occurred while \output is active [1522] [1523] Package longtable Warning: Column widths have changed (longtable) in table 47.742 on input line 2396. [1524] Package longtable Warning: Column widths have changed (longtable) in table 47.743 on input line 2436. [1525] Package longtable Warning: Column widths have changed (longtable) in table 47.744 on input line 2474. Package longtable Warning: Column widths have changed (longtable) in table 47.745 on input line 2517. [1526] Package longtable Warning: Column widths have changed (longtable) in table 47.746 on input line 2556. [1527] Package longtable Warning: Column widths have changed (longtable) in table 47.747 on input line 2674. [1528] Package longtable Warning: Column widths have changed (longtable) in table 47.748 on input line 2712. [1529] Package longtable Warning: Column widths have changed (longtable) in table 47.749 on input line 2759. [1530] Package longtable Warning: Column widths have changed (longtable) in table 47.750 on input line 2821. [1531] Package longtable Warning: Column widths have changed (longtable) in table 47.751 on input line 2877. Package longtable Warning: Column widths have changed (longtable) in table 47.752 on input line 2934. Overfull \vbox (16.03447pt too high) has occurred while \output is active [1532] Package longtable Warning: Column widths have changed (longtable) in table 47.753 on input line 2983. [1533] Package longtable Warning: Column widths have changed (longtable) in table 47.754 on input line 3045. [1534] Package longtable Warning: Column widths have changed (longtable) in table 47.755 on input line 3111. [1535] Package longtable Warning: Column widths have changed (longtable) in table 47.756 on input line 3200. Underfull \vbox (badness 10000) has occurred while \output is active [1536] Package longtable Warning: Column widths have changed (longtable) in table 47.757 on input line 3230. [1537] Package longtable Warning: Column widths have changed (longtable) in table 47.758 on input line 3264. [1538] Package longtable Warning: Column widths have changed (longtable) in table 47.759 on input line 3336. ) (./namespacemom__fixed__initialization.tex [1539] Package longtable Warning: Column widths have changed (longtable) in table 47.760 on input line 40. [1540] [1541] Package longtable Warning: Column widths have changed (longtable) in table 47.761 on input line 183. [1542]) (./namespacemom__forcing__type.tex [1543] [1544] [1545] [1546] Package longtable Warning: Column widths have changed (longtable) in table 47.762 on input line 157. [1547] [1548] Package longtable Warning: Column widths have changed (longtable) in table 47.763 on input line 246. [1549] Package longtable Warning: Column widths have changed (longtable) in table 47.764 on input line 324. [1550] Package longtable Warning: Column widths have changed (longtable) in table 47.765 on input line 383. Package longtable Warning: Column widths have changed (longtable) in table 47.766 on input line 445. [1551] [1552] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(inout) \T1/pcr/m/sl/8 buoyancy[] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 net[]Heat[] [1553] Package longtable Warning: Column widths have changed (longtable) in table 47.767 on input line 597. [1554] Package longtable Warning: Column widths have changed (longtable) in table 47.768 on input line 659. [1555] Package longtable Warning: Column widths have changed (longtable) in table 47.769 on input line 700. Package longtable Warning: Column widths have changed (longtable) in table 47.770 on input line 759. Underfull \vbox (badness 10000) has occurred while \output is active [1556] Package longtable Warning: Column widths have changed (longtable) in table 47.771 on input line 828. [1557] Package longtable Warning: Column widths have changed (longtable) in table 47.772 on input line 915. [1558] [1559] Underfull \vbox (badness 10000) has occurred while \output is active [1560] Underfull \vbox (badness 10000) has occurred while \output is active [1561] Underfull \vbox (badness 10000) has occurred while \output is active [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] Underfull \vbox (badness 10000) has occurred while \output is active [1564] [1565] Package longtable Warning: Column widths have changed (longtable) in table 47.773 on input line 1435. [1566] [1567] Package longtable Warning: Column widths have changed (longtable) in table 47.774 on input line 1536. [1568] Underfull \vbox (badness 10000) has occurred while \output is active [1569] Package longtable Warning: Column widths have changed (longtable) in table 47.775 on input line 1716. [1570] Package longtable Warning: Column widths have changed (longtable) in table 47.776 on input line 1765. [1571] Underfull \vbox (badness 10000) has occurred while \output is active [1572] Underfull \vbox (badness 10000) has occurred while \output is active [1573] Underfull \vbox (badness 10000) has occurred while \output is active [1574] Underfull \vbox (badness 10000) has occurred while \output is active [1575] Underfull \vbox (badness 10000) has occurred while \output is active [1576] Underfull \vbox (badness 10000) has occurred while \output is active [1577] [1578] Package longtable Warning: Column widths have changed (longtable) in table 47.777 on input line 2387. [1579] Package longtable Warning: Column widths have changed (longtable) in table 47.778 on input line 2483. [1580] Package longtable Warning: Column widths have changed (longtable) in table 47.779 on input line 2541. [1581] Package longtable Warning: Column widths have changed (longtable) in table 47.780 on input line 2588. [1582] Package longtable Warning: Column widths have changed (longtable) in table 47.781 on input line 2657. [1583] Package longtable Warning: Column widths have changed (longtable) in table 47.782 on input line 2738. [1584] Package longtable Warning: Column widths have changed (longtable) in table 47.783 on input line 2794. [1585] Package longtable Warning: Column widths have changed (longtable) in table 47.784 on input line 2922. [1586] Package longtable Warning: Column widths have changed (longtable) in table 47.785 on input line 2979. [1587] Package longtable Warning: Column widths have changed (longtable) in table 47.786 on input line 3021. [1588] Underfull \vbox (badness 10000) has occurred while \output is active [1589] Underfull \vbox (badness 10000) has occurred while \output is active [1590] Underfull \vbox (badness 10000) has occurred while \output is active [1591] Underfull \vbox (badness 10000) has occurred while \output is active [1592] Underfull \vbox (badness 10000) has occurred while \output is active [1593] Underfull \vbox (badness 10000) has occurred while \output is active [1594] Underfull \vbox (badness 10000) has occurred while \output is active [1595] [1596] Package longtable Warning: Column widths have changed (longtable) in table 47.787 on input line 3718. [1597] [1598] Package longtable Warning: Column widths have changed (longtable) in table 47.788 on input line 3862. [1599] Package longtable Warning: Column widths have changed (longtable) in table 47.789 on input line 3937. [1600] Package longtable Warning: Column widths have changed (longtable) in table 47.790 on input line 4002. ) (./namespacemom__full__convection.tex [1601] Package longtable Warning: Column widths have changed (longtable) in table 47.791 on input line 52. [1602] Underfull \vbox (badness 10000) has occurred while \output is active [1603] Underfull \vbox (badness 10000) has occurred while \output is active [1604] [1605] Package longtable Warning: Column widths have changed (longtable) in table 47.792 on input line 361. Underfull \hbox (badness 10000) detected at line 362 [][][] [1606] Package longtable Warning: Column widths have changed (longtable) in table 47.793 on input line 438. Overfull \vbox (25.10631pt too high) has occurred while \output is active [1607] [1608]) (./namespacemom__generic__tracer.tex [1609] Package longtable Warning: Column widths have changed (longtable) in table 47.794 on input line 57. [1610] Package longtable Warning: Column widths have changed (longtable) in table 47.795 on input line 110. [1611] Underfull \vbox (badness 10000) has occurred while \output is active [1612] [1613] Package longtable Warning: Column widths have changed (longtable) in table 47.796 on input line 288. [1614] Package longtable Warning: Column widths have changed (longtable) in table 47.797 on input line 370. [1615] Underfull \vbox (badness 10000) has occurred while \output is active [1616] Package longtable Warning: Column widths have changed (longtable) in table 47.798 on input line 554. [1617] Package longtable Warning: Column widths have changed (longtable) in table 47.799 on input line 588. [1618] Package longtable Warning: Column widths have changed (longtable) in table 47.800 on input line 647. Underfull \hbox (badness 10000) detected at line 648 [][][] [1619] Package longtable Warning: Column widths have changed (longtable) in table 47.801 on input line 762. Overfull \vbox (42.70247pt too high) has occurred while \output is active [1620] Underfull \hbox (badness 10000) detected at line 763 [][][] [1621] Package longtable Warning: Column widths have changed (longtable) in table 47.802 on input line 856. [1622] Package longtable Warning: Column widths have changed (longtable) in table 47.803 on input line 929. [1623] Underfull \vbox (badness 10000) has occurred while \output is active [1624]) (./namespacemom__geothermal.tex [1625] Package longtable Warning: Column widths have changed (longtable) in table 47.804 on input line 41. Overfull \hbox (16.47752pt too wide) in alignment at lines 86--86 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.805 on input line 86. Underfull \vbox (badness 10000) has occurred while \output is active [1626] [1627] Underfull \vbox (badness 10000) has occurred while \output is active [1628] Underfull \vbox (badness 10000) has occurred while \output is active [1629] [1630] Overfull \hbox (16.47752pt too wide) in alignment at lines 434--434 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.806 on input line 434. [1631] Underfull \vbox (badness 10000) has occurred while \output is active [1632] Package longtable Warning: Column widths have changed (longtable) in table 47.807 on input line 598. [1633] Underfull \vbox (badness 10000) has occurred while \output is active [1634]) (./namespacemom__get__input.tex [1635] Package longtable Warning: Column widths have changed (longtable) in table 47.808 on input line 43. [1636]) (./namespacemom__grid.tex [1637] Package longtable Warning: Column widths have changed (longtable) in table 47.809 on input line 69. [1638] Underfull \hbox (badness 10000) detected at line 70 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.810 on input line 98. [1639] Package longtable Warning: Column widths have changed (longtable) in table 47.811 on input line 191. [1640] Package longtable Warning: Column widths have changed (longtable) in table 47.812 on input line 227. [1641] Package longtable Warning: Column widths have changed (longtable) in table 47.813 on input line 280. [1642] Package longtable Warning: Column widths have changed (longtable) in table 47.814 on input line 350. [1643] Underfull \vbox (badness 10000) has occurred while \output is active [1644] [1645] Package longtable Warning: Column widths have changed (longtable) in table 47.815 on input line 573. Package longtable Warning: Column widths have changed (longtable) in table 47.816 on input line 625. [1646] Package longtable Warning: Column widths have changed (longtable) in table 47.817 on input line 691. ) (./namespacemom__grid__initialize.tex [1647] [1648] Package longtable Warning: Column widths have changed (longtable) in table 47.818 on input line 71. Underfull \hbox (badness 10000) detected at line 72 [][][] [1649] Package longtable Warning: Column widths have changed (longtable) in table 47.819 on input line 107. Package longtable Warning: Column widths have changed (longtable) in table 47.820 on input line 150. Overfull \vbox (10.33813pt too high) has occurred while \output is active [1650] Package longtable Warning: Column widths have changed (longtable) in table 47.821 on input line 186. [1651] Package longtable Warning: Column widths have changed (longtable) in table 47.822 on input line 220. Package longtable Warning: Column widths have changed (longtable) in table 47.823 on input line 250. [1652] Package longtable Warning: Column widths have changed (longtable) in table 47.824 on input line 300. [1653] Underfull \hbox (badness 10000) detected at line 347 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.825 on input line 368. [1654] [1655] Package longtable Warning: Column widths have changed (longtable) in table 47.826 on input line 501. [1656] [1657] Package longtable Warning: Column widths have changed (longtable) in table 47.827 on input line 575. [1658] Package longtable Warning: Column widths have changed (longtable) in table 47.828 on input line 681. [1659] Package longtable Warning: Column widths have changed (longtable) in table 47.829 on input line 711. [1660] Package longtable Warning: Column widths have changed (longtable) in table 47.830 on input line 776. [1661] Package longtable Warning: Column widths have changed (longtable) in table 47.831 on input line 850. [1662] [1663] Package longtable Warning: Column widths have changed (longtable) in table 47.832 on input line 1002. [1664] Underfull \vbox (badness 10000) has occurred while \output is active [1665] Underfull \vbox (badness 10000) has occurred while \output is active [1666] Package longtable Warning: Column widths have changed (longtable) in table 47.833 on input line 1269. [1667] Underfull \vbox (badness 10000) has occurred while \output is active [1668] Underfull \vbox (badness 10000) has occurred while \output is active [1669] Package longtable Warning: Column widths have changed (longtable) in table 47.834 on input line 1523. [1670] Underfull \vbox (badness 10000) has occurred while \output is active [1671]) (./namespacemom__hor__index.tex [1672] Package longtable Warning: Column widths have changed (longtable) in table 47.835 on input line 55. [1673] Package longtable Warning: Column widths have changed (longtable) in table 47.836 on input line 102. [1674] Package longtable Warning: Column widths have changed (longtable) in table 47.837 on input line 163. ) (./namespacemom__hor__visc.tex [1675] [1676] [1677] [1678] [1679] Package longtable Warning: Column widths have changed (longtable) in table 47.838 on input line 95. [1680] Package longtable Warning: Column widths have changed (longtable) in table 47.839 on input line 129. [1681] Package longtable Warning: Column widths have changed (longtable) in table 47.840 on input line 210. [1682] Underfull \vbox (badness 10000) has occurred while \output is active [1683] Underfull \vbox (badness 10000) has occurred while \output is active [1684] Underfull \vbox (badness 10000) has occurred while \output is active [1685] Underfull \vbox (badness 10000) has occurred while \output is active [1686] Underfull \vbox (badness 10000) has occurred while \output is active [1687] Underfull \vbox (badness 10000) has occurred while \output is active [1688] Underfull \vbox (badness 10000) has occurred while \output is active [1689] Underfull \vbox (badness 10000) has occurred while \output is active [1690] [1691] Package longtable Warning: Column widths have changed (longtable) in table 47.841 on input line 1024. [1692] Underfull \vbox (badness 10000) has occurred while \output is active [1693] Underfull \vbox (badness 10000) has occurred while \output is active [1694] Underfull \vbox (badness 10000) has occurred while \output is active [1695] Underfull \vbox (badness 10000) has occurred while \output is active [1696] Underfull \vbox (badness 10000) has occurred while \output is active [1697] Underfull \vbox (badness 10000) has occurred while \output is active [1698] Underfull \vbox (badness 10000) has occurred while \output is active [1699] Underfull \vbox (badness 10000) has occurred while \output is active [1700] Underfull \vbox (badness 10000) has occurred while \output is active [1701] Underfull \vbox (badness 10000) has occurred while \output is active [1702] Underfull \vbox (badness 10000) has occurred while \output is active [1703] Underfull \vbox (badness 10000) has occurred while \output is active [1704] Underfull \vbox (badness 10000) has occurred while \output is active [1705] Underfull \vbox (badness 10000) has occurred while \output is active [1706] [1707] Package longtable Warning: Column widths have changed (longtable) in table 47.842 on input line 2262. [1708]) (./namespacemom__horizontal__regridding.tex [1709] Package longtable Warning: Column widths have changed (longtable) in table 47.843 on input line 53. Underfull \hbox (badness 10000) in paragraph at lines 79--80 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [1710] Package longtable Warning: Column widths have changed (longtable) in table 47.844 on input line 93. [1711] Package longtable Warning: Column widths have changed (longtable) in table 47.845 on input line 163. [1712] Underfull \vbox (badness 10000) has occurred while \output is active [1713] [1714] Package longtable Warning: Column widths have changed (longtable) in table 47.846 on input line 381. [1715] Underfull \vbox (badness 10000) has occurred while \output is active [1716] Underfull \vbox (badness 10000) has occurred while \output is active [1717] Underfull \vbox (badness 10000) has occurred while \output is active [1718] Package longtable Warning: Column widths have changed (longtable) in table 47.847 on input line 723. [1719] [1720] Underfull \vbox (badness 10000) has occurred while \output is active [1721] Underfull \vbox (badness 10000) has occurred while \output is active [1722] Underfull \vbox (badness 10000) has occurred while \output is active [1723] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 x[] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 y[] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] Package longtable Warning: Column widths have changed (longtable) in table 47.848 on input line 1109. [1724] Package longtable Warning: Column widths have changed (longtable) in table 47.849 on input line 1162. Overfull \vbox (13.0991pt too high) has occurred while \output is active [1725] Package longtable Warning: Column widths have changed (longtable) in table 47.850 on input line 1232. Overfull \vbox (52.21524pt too high) has occurred while \output is active [1726]) (./namespacemom__ice__shelf.tex [1727] [1728] [1729] Package longtable Warning: Column widths have changed (longtable) in table 47.851 on input line 95. [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] Package longtable Warning: Column widths have changed (longtable) in table 47.852 on input line 326. [1733] Package longtable Warning: Column widths have changed (longtable) in table 47.853 on input line 430. [1734] Package longtable Warning: Column widths have changed (longtable) in table 47.854 on input line 490. [1735] Package longtable Warning: Column widths have changed (longtable) in table 47.855 on input line 555. [1736] Package longtable Warning: Column widths have changed (longtable) in table 47.856 on input line 595. [1737] Package longtable Warning: Column widths have changed (longtable) in table 47.857 on input line 652. [1738] Underfull \vbox (badness 10000) has occurred while \output is active [1739] Underfull \vbox (badness 10000) has occurred while \output is active [1740] Underfull \vbox (badness 10000) has occurred while \output is active [1741] Underfull \vbox (badness 10000) has occurred while \output is active [1742] Underfull \vbox (badness 10000) has occurred while \output is active [1743] Underfull \vbox (badness 10000) has occurred while \output is active [1744] Package longtable Warning: Column widths have changed (longtable) in table 47.858 on input line 1239. [1745] [1746] Package longtable Warning: Column widths have changed (longtable) in table 47.859 on input line 1348. [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Underfull \vbox (badness 10000) has occurred while \output is active [1749] Underfull \vbox (badness 10000) has occurred while \output is active [1750] Underfull \vbox (badness 10000) has occurred while \output is active [1751] Underfull \vbox (badness 10000) has occurred while \output is active [1752] [1753] Package longtable Warning: Column widths have changed (longtable) in table 47.860 on input line 1910. [1754] Package longtable Warning: Column widths have changed (longtable) in table 47.861 on input line 2007. [1755]) (./namespacemom__ice__shelf__dynamics.tex [1756] [1757] Package longtable Warning: Column widths have changed (longtable) in table 47.862 on input line 121. [1758] Underfull \vbox (badness 10000) has occurred while \output is active [1759] Overfull \hbox (21.48143pt too wide) in alignment at lines 296--296 [] [] [] [1760] Package longtable Warning: Column widths have changed (longtable) in table 47.863 on input line 296. [1761] Overfull \hbox (15.47855pt too wide) in alignment at lines 375--375 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.864 on input line 375. [1762] Package longtable Warning: Column widths have changed (longtable) in table 47.865 on input line 464. [1763] Package longtable Warning: Column widths have changed (longtable) in table 47.866 on input line 541. [1764] Underfull \vbox (badness 10000) has occurred while \output is active [1765] Underfull \vbox (badness 10000) has occurred while \output is active [1766] Package longtable Warning: Column widths have changed (longtable) in table 47.867 on input line 769. [1767] Package longtable Warning: Column widths have changed (longtable) in table 47.868 on input line 850. [1768] Package longtable Warning: Column widths have changed (longtable) in table 47.869 on input line 927. [1769] [1770] Underfull \vbox (badness 10000) has occurred while \output is active [1771] Package longtable Warning: Column widths have changed (longtable) in table 47.870 on input line 1112. [1772] Package longtable Warning: Column widths have changed (longtable) in table 47.871 on input line 1176. [1773] Package longtable Warning: Column widths have changed (longtable) in table 47.872 on input line 1239. [1774] [1775] Package longtable Warning: Column widths have changed (longtable) in table 47.873 on input line 1349. [1776] Underfull \vbox (badness 10000) has occurred while \output is active [1777] Package longtable Warning: Column widths have changed (longtable) in table 47.874 on input line 1548. Overfull \vbox (13.57463pt too high) has occurred while \output is active [1778] [1779] [1780] Package longtable Warning: Column widths have changed (longtable) in table 47.875 on input line 1733. [1781] Package longtable Warning: Column widths have changed (longtable) in table 47.876 on input line 1845. Overfull \vbox (35.12973pt too high) has occurred while \output is active [1782] [1783] Package longtable Warning: Column widths have changed (longtable) in table 47.877 on input line 1945. Package longtable Warning: Column widths have changed (longtable) in table 47.878 on input line 1993. Overfull \vbox (30.19351pt too high) has occurred while \output is active [1784] Package longtable Warning: Column widths have changed (longtable) in table 47.879 on input line 2069. [1785] [1786] Underfull \vbox (badness 10000) has occurred while \output is active [1787] Underfull \vbox (badness 10000) has occurred while \output is active [1788] Underfull \vbox (badness 10000) has occurred while \output is active [1789] Package longtable Warning: Column widths have changed (longtable) in table 47.880 on input line 2399. [1790] Underfull \vbox (badness 10000) has occurred while \output is active [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] Package longtable Warning: Column widths have changed (longtable) in table 47.881 on input line 2658. Overfull \vbox (1.09367pt too high) has occurred while \output is active [1793] [1794] Package longtable Warning: Column widths have changed (longtable) in table 47.882 on input line 2774. Underfull \hbox (badness 10000) detected at line 2775 [][][] [1795] Package longtable Warning: Column widths have changed (longtable) in table 47.883 on input line 2833. [1796] Package longtable Warning: Column widths have changed (longtable) in table 47.884 on input line 2924. [1797] Package longtable Warning: Column widths have changed (longtable) in table 47.885 on input line 2994. [1798] Underfull \vbox (badness 10000) has occurred while \output is active [1799] Underfull \vbox (badness 10000) has occurred while \output is active [1800] Underfull \vbox (badness 10000) has occurred while \output is active [1801] Package longtable Warning: Column widths have changed (longtable) in table 47.886 on input line 3311. Underfull \vbox (badness 10000) has occurred while \output is active [1802] [1803] Package longtable Warning: Column widths have changed (longtable) in table 47.887 on input line 3395. [1804] [1805] Package longtable Warning: Column widths have changed (longtable) in table 47.888 on input line 3526. Package longtable Warning: Column widths have changed (longtable) in table 47.889 on input line 3569. [1806] Package longtable Warning: Column widths have changed (longtable) in table 47.890 on input line 3653. Overfull \vbox (22.12805pt too high) has occurred while \output is active [1807] [1808] Underfull \vbox (badness 10000) has occurred while \output is active [1809] Package longtable Warning: Column widths have changed (longtable) in table 47.891 on input line 3868. [1810] Package longtable Warning: Column widths have changed (longtable) in table 47.892 on input line 3920. [1811] Package longtable Warning: Column widths have changed (longtable) in table 47.893 on input line 4003. [1812] Package longtable Warning: Column widths have changed (longtable) in table 47.894 on input line 4062. [1813] Package longtable Warning: Column widths have changed (longtable) in table 47.895 on input line 4117. [1814] Underfull \vbox (badness 10000) has occurred while \output is active [1815]) (./namespacemom__ice__shelf__initialize.tex [1816] Package longtable Warning: Column widths have changed (longtable) in table 47.896 on input line 42. [1817] Package longtable Warning: Column widths have changed (longtable) in table 47.897 on input line 103. [1818] [1819] Package longtable Warning: Column widths have changed (longtable) in table 47.898 on input line 227. [1820]) (./namespacemom__ice__shelf__state.tex [1821] Package longtable Warning: Column widths have changed (longtable) in table 47.899 on input line 35. Package longtable Warning: Column widths have changed (longtable) in table 47.900 on input line 70. ) (./namespacemom__int__tide__input.tex [1822] [1823] Package longtable Warning: Column widths have changed (longtable) in table 47.901 on input line 59. [1824] [1825] Package longtable Warning: Column widths have changed (longtable) in table 47.902 on input line 198. Package longtable Warning: Column widths have changed (longtable) in table 47.903 on input line 238. [1826] Underfull \vbox (badness 10000) has occurred while \output is active [1827] [1828] Package longtable Warning: Column widths have changed (longtable) in table 47.904 on input line 434. [1829]) (./namespacemom__interface__heights.tex [1830] Package longtable Warning: Column widths have changed (longtable) in table 47.905 on input line 51. [1831] Underfull \vbox (badness 10000) has occurred while \output is active [1832] Package longtable Warning: Column widths have changed (longtable) in table 47.906 on input line 185. [1833] Underfull \vbox (badness 10000) has occurred while \output is active [1834]) (./namespacemom__internal__tides.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [1835] Package longtable Warning: Column widths have changed (longtable) in table 47.907 on input line 84. Overfull \vbox (36.89885pt too high) has occurred while \output is active [1836] [1837] Package longtable Warning: Column widths have changed (longtable) in table 47.908 on input line 171. Package longtable Warning: Column widths have changed (longtable) in table 47.909 on input line 207. [1838] Package longtable Warning: Column widths have changed (longtable) in table 47.910 on input line 253. [1839] Underfull \vbox (badness 10000) has occurred while \output is active [1840] Underfull \vbox (badness 10000) has occurred while \output is active [1841] Underfull \vbox (badness 10000) has occurred while \output is active [1842] Underfull \vbox (badness 10000) has occurred while \output is active [1843] Underfull \vbox (badness 10000) has occurred while \output is active [1844] Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(inout) Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(out) \T1/pcr/m/sl/8 T[] Package longtable Warning: Column widths have changed (longtable) in table 47.911 on input line 741. [1845] [1846] Package longtable Warning: Column widths have changed (longtable) in table 47.912 on input line 873. [1847] Package longtable Warning: Column widths have changed (longtable) in table 47.913 on input line 945. [1848] [1849] Package longtable Warning: Column widths have changed (longtable) in table 47.914 on input line 1072. [1850] Package longtable Warning: Column widths have changed (longtable) in table 47.915 on input line 1138. [1851] Package longtable Warning: Column widths have changed (longtable) in table 47.916 on input line 1242. [1852] [1853] Package longtable Warning: Column widths have changed (longtable) in table 47.917 on input line 1348. [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] Package longtable Warning: Column widths have changed (longtable) in table 47.918 on input line 1505. [1856] Underfull \vbox (badness 10000) has occurred while \output is active [1857] Underfull \vbox (badness 10000) has occurred while \output is active [1858] Underfull \vbox (badness 10000) has occurred while \output is active [1859] Package longtable Warning: Column widths have changed (longtable) in table 47.919 on input line 1808. [1860] Underfull \vbox (badness 10000) has occurred while \output is active [1861] Underfull \vbox (badness 10000) has occurred while \output is active [1862] Underfull \vbox (badness 10000) has occurred while \output is active [1863] Underfull \vbox (badness 10000) has occurred while \output is active [1864] Underfull \vbox (badness 10000) has occurred while \output is active [1865] Package longtable Warning: Column widths have changed (longtable) in table 47.920 on input line 2285. Overfull \vbox (21.70555pt too high) has occurred while \output is active [1866] [1867] Package longtable Warning: Column widths have changed (longtable) in table 47.921 on input line 2396. [1868] [1869] Package longtable Warning: Column widths have changed (longtable) in table 47.922 on input line 2504. [1870] Package longtable Warning: Column widths have changed (longtable) in table 47.923 on input line 2643. [1871] [1872] [1873] Package longtable Warning: Column widths have changed (longtable) in table 47.924 on input line 2796. [1874] Package longtable Warning: Column widths have changed (longtable) in table 47.925 on input line 2863. [1875] Package longtable Warning: Column widths have changed (longtable) in table 47.926 on input line 3004. [1876]) (./namespacemom__intrinsic__functions.tex [1877] Package longtable Warning: Column widths have changed (longtable) in table 47.927 on input line 28. ) (./namespacemom__io.tex [1878] [1879] [1880] Package longtable Warning: Column widths have changed (longtable) in table 47.928 on input line 93. Underfull \hbox (badness 10000) detected at line 94 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.929 on input line 149. Overfull \vbox (81.31973pt too high) has occurred while \output is active [1881] [1882] Underfull \vbox (badness 10000) has occurred while \output is active [1883] Underfull \vbox (badness 10000) has occurred while \output is active [1884] Package longtable Warning: Column widths have changed (longtable) in table 47.930 on input line 425. Underfull \hbox (badness 10000) detected at line 426 [][][] [1885] Package longtable Warning: Column widths have changed (longtable) in table 47.931 on input line 507. [1886] Package longtable Warning: Column widths have changed (longtable) in table 47.932 on input line 561. [1887] Package longtable Warning: Column widths have changed (longtable) in table 47.933 on input line 623. [1888] Package longtable Warning: Column widths have changed (longtable) in table 47.934 on input line 655. Package longtable Warning: Column widths have changed (longtable) in table 47.935 on input line 694. [1889] Package longtable Warning: Column widths have changed (longtable) in table 47.936 on input line 741. [1890] Package longtable Warning: Column widths have changed (longtable) in table 47.937 on input line 796. [1891] Package longtable Warning: Column widths have changed (longtable) in table 47.938 on input line 851. [1892] Package longtable Warning: Column widths have changed (longtable) in table 47.939 on input line 912. [1893] Package longtable Warning: Column widths have changed (longtable) in table 47.940 on input line 990. [1894] Package longtable Warning: Column widths have changed (longtable) in table 47.941 on input line 1055. Underfull \hbox (badness 10000) detected at line 1056 [][][] [1895] Underfull \vbox (badness 10000) has occurred while \output is active [1896] Package longtable Warning: Column widths have changed (longtable) in table 47.942 on input line 1215. [1897] Package longtable Warning: Column widths have changed (longtable) in table 47.943 on input line 1280. [1898] Package longtable Warning: Column widths have changed (longtable) in table 47.944 on input line 1356. [1899] Underfull \vbox (badness 10000) has occurred while \output is active [1900] Package longtable Warning: Column widths have changed (longtable) in table 47.945 on input line 1465. [1901] [1902] Package longtable Warning: Column widths have changed (longtable) in table 47.946 on input line 1522. Underfull \hbox (badness 10000) detected at line 1523 [][][] ) (./namespacemom__isopycnal__slopes.tex [1903] Package longtable Warning: Column widths have changed (longtable) in table 47.947 on input line 54. Overfull \vbox (20.40102pt too high) has occurred while \output is active [1904] [1905] Underfull \vbox (badness 10000) has occurred while \output is active [1906] Underfull \vbox (badness 10000) has occurred while \output is active [1907] Underfull \vbox (badness 10000) has occurred while \output is active [1908] [1909] Package longtable Warning: Column widths have changed (longtable) in table 47.948 on input line 461. [1910]) (./namespacemom__kappa__shear.tex [1911] [1912] [1913] Package longtable Warning: Column widths have changed (longtable) in table 47.949 on input line 83. [1914] Underfull \vbox (badness 10000) has occurred while \output is active [1915] Underfull \vbox (badness 10000) has occurred while \output is active [1916] [1917] Package longtable Warning: Column widths have changed (longtable) in table 47.950 on input line 409. [1918] Underfull \vbox (badness 10000) has occurred while \output is active [1919] Underfull \vbox (badness 10000) has occurred while \output is active [1920] [1921] Package longtable Warning: Column widths have changed (longtable) in table 47.951 on input line 702. [1922] Underfull \vbox (badness 10000) has occurred while \output is active [1923] [1924] Package longtable Warning: Column widths have changed (longtable) in table 47.952 on input line 888. [1925] Underfull \vbox (badness 10000) has occurred while \output is active [1926] Underfull \vbox (badness 10000) has occurred while \output is active [1927] Underfull \vbox (badness 10000) has occurred while \output is active [1928] Underfull \vbox (badness 10000) has occurred while \output is active [1929] Underfull \vbox (badness 10000) has occurred while \output is active [1930] Underfull \vbox (badness 10000) has occurred while \output is active [1931] Package longtable Warning: Column widths have changed (longtable) in table 47.953 on input line 1459. [1932] Package longtable Warning: Column widths have changed (longtable) in table 47.954 on input line 1534. [1933] [1934] Underfull \vbox (badness 10000) has occurred while \output is active [1935] Underfull \vbox (badness 10000) has occurred while \output is active [1936] Underfull \vbox (badness 10000) has occurred while \output is active [1937] Underfull \vbox (badness 10000) has occurred while \output is active [1938] [1939] Package longtable Warning: Column widths have changed (longtable) in table 47.955 on input line 2017. Underfull \hbox (badness 10000) detected at line 2018 [][][] [1940] Underfull \vbox (badness 10000) has occurred while \output is active [1941] [1942] Package longtable Warning: Column widths have changed (longtable) in table 47.956 on input line 2227. ) (./namespacemom__lateral__boundary__diffusion.tex [1943] [1944] [1945] Package longtable Warning: Column widths have changed (longtable) in table 47.957 on input line 135. [1946] [1947] Package longtable Warning: Column widths have changed (longtable) in table 47.958 on input line 242. [1948] [1949] Package longtable Warning: Column widths have changed (longtable) in table 47.959 on input line 364. [1950] Underfull \vbox (badness 10000) has occurred while \output is active [1951] Underfull \vbox (badness 10000) has occurred while \output is active [1952] [1953] Package longtable Warning: Column widths have changed (longtable) in table 47.960 on input line 649. [1954] Underfull \vbox (badness 10000) has occurred while \output is active [1955] [1956] Package longtable Warning: Column widths have changed (longtable) in table 47.961 on input line 844. Package longtable Warning: Column widths have changed (longtable) in table 47.962 on input line 889. [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] Underfull \vbox (badness 10000) has occurred while \output is active [1959] Package longtable Warning: Column widths have changed (longtable) in table 47.963 on input line 1096. [1960] Package longtable Warning: Column widths have changed (longtable) in table 47.964 on input line 1183. [1961] Underfull \vbox (badness 10000) has occurred while \output is active [1962] Underfull \vbox (badness 10000) has occurred while \output is active [1963] Underfull \vbox (badness 10000) has occurred while \output is active [1964] Underfull \vbox (badness 10000) has occurred while \output is active [1965] Package longtable Warning: Column widths have changed (longtable) in table 47.965 on input line 1548. [1966] Package longtable Warning: Column widths have changed (longtable) in table 47.966 on input line 1608. ) (./namespacemom__lateral__mixing__coeffs.tex [1967] [1968] [1969] Package longtable Warning: Column widths have changed (longtable) in table 47.970 on input line 128. [1970] Package longtable Warning: Column widths have changed (longtable) in table 47.971 on input line 198. [1971] Underfull \vbox (badness 10000) has occurred while \output is active [1972] Package longtable Warning: Column widths have changed (longtable) in table 47.972 on input line 366. [1973] Underfull \vbox (badness 10000) has occurred while \output is active [1974] Underfull \vbox (badness 10000) has occurred while \output is active [1975] [1976] Package longtable Warning: Column widths have changed (longtable) in table 47.973 on input line 643. [1977] Package longtable Warning: Column widths have changed (longtable) in table 47.974 on input line 722. [1978] Underfull \vbox (badness 10000) has occurred while \output is active [1979] [1980] Package longtable Warning: Column widths have changed (longtable) in table 47.975 on input line 920. [1981] Underfull \vbox (badness 10000) has occurred while \output is active [1982] Package longtable Warning: Column widths have changed (longtable) in table 47.976 on input line 1116. [1983] [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] Underfull \vbox (badness 10000) has occurred while \output is active [1986] Underfull \vbox (badness 10000) has occurred while \output is active [1987] Underfull \vbox (badness 10000) has occurred while \output is active [1988]) (./namespacemom__marine__ice.tex [1989] Package longtable Warning: Column widths have changed (longtable) in table 47.977 on input line 49. [1990] Package longtable Warning: Column widths have changed (longtable) in table 47.978 on input line 150. [1991] Package longtable Warning: Column widths have changed (longtable) in table 47.979 on input line 231. Overfull \vbox (43.3866pt too high) has occurred while \output is active [1992]) (./namespacemom__meke.tex [1993] [1994] [1995] [1996] [1997] Package longtable Warning: Column widths have changed (longtable) in table 47.982 on input line 160. [1998] Package longtable Warning: Column widths have changed (longtable) in table 47.983 on input line 259. [1999] Package longtable Warning: Column widths have changed (longtable) in table 47.984 on input line 314. [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] [2002] Package longtable Warning: Column widths have changed (longtable) in table 47.985 on input line 497. [2003] Package longtable Warning: Column widths have changed (longtable) in table 47.986 on input line 559. [2004] Underfull \vbox (badness 10000) has occurred while \output is active [2005] Underfull \vbox (badness 10000) has occurred while \output is active [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] Package longtable Warning: Column widths have changed (longtable) in table 47.987 on input line 960. [2009] Package longtable Warning: Column widths have changed (longtable) in table 47.988 on input line 1072. [2010] [2011] Package longtable Warning: Column widths have changed (longtable) in table 47.989 on input line 1183. [2012] Underfull \vbox (badness 10000) has occurred while \output is active [2013] Underfull \vbox (badness 10000) has occurred while \output is active [2014] Underfull \vbox (badness 10000) has occurred while \output is active [2015] Underfull \vbox (badness 10000) has occurred while \output is active [2016] Underfull \vbox (badness 10000) has occurred while \output is active [2017] Underfull \vbox (badness 10000) has occurred while \output is active [2018]) (./namespacemom__mixed__layer__restrat.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. [2019] [2020] [2021] Package longtable Warning: Column widths have changed (longtable) in table 47.991 on input line 115. [2022] Package longtable Warning: Column widths have changed (longtable) in table 47.992 on input line 181. Underfull \vbox (badness 10000) has occurred while \output is active [2023] [2024] Underfull \vbox (badness 10000) has occurred while \output is active [2025] [2026] Package longtable Warning: Column widths have changed (longtable) in table 47.993 on input line 455. [2027] Underfull \vbox (badness 10000) has occurred while \output is active [2028] Underfull \vbox (badness 10000) has occurred while \output is active [2029] Underfull \vbox (badness 10000) has occurred while \output is active [2030] Underfull \vbox (badness 10000) has occurred while \output is active [2031] Underfull \vbox (badness 10000) has occurred while \output is active [2032] Package longtable Warning: Column widths have changed (longtable) in table 47.994 on input line 935. [2033] Underfull \vbox (badness 10000) has occurred while \output is active [2034] [2035] Package longtable Warning: Column widths have changed (longtable) in table 47.995 on input line 1111. ) (./namespacemom__neutral__diffusion.tex [2036] [2037] Overfull \hbox (120.57199pt too wide) in paragraph at lines 53--53 []\T1/phv/m/sl/9 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/9 ^^A\OML/cmm/m/it/9 ^^Z \OT1/cmr/m/n/9 = [] []$\T1/phv/m /sl/9 . [2038] Package longtable Warning: Column widths have changed (longtable) in table 47.996 on input line 121. Underfull \hbox (badness 10000) detected at line 122 [][][] [2039] Package longtable Warning: Column widths have changed (longtable) in table 47.997 on input line 169. Underfull \hbox (badness 10000) detected at line 170 [][][] [2040] Package longtable Warning: Column widths have changed (longtable) in table 47.998 on input line 232. [2041] Package longtable Warning: Column widths have changed (longtable) in table 47.999 on input line 322. [2042] Overfull \hbox (132.78908pt too wide) in paragraph at lines 352--353 []\T1/phv/m/n/10 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/10 ^^A\OML/cmm/m/it/10 ^^Z \OT1/cmr/m/n/10 = [] []$\T1/ph v/m/n/10 . Package longtable Warning: Column widths have changed (longtable) in table 47.1000 on input line 376. [2043] Package longtable Warning: Column widths have changed (longtable) in table 47.1001 on input line 431. Underfull \hbox (badness 10000) detected at line 432 [][][] [2044] Underfull \vbox (badness 10000) has occurred while \output is active [2045] Package longtable Warning: Column widths have changed (longtable) in table 47.1002 on input line 572. [2046] Underfull \hbox (badness 10000) detected at line 573 [][][] [2047] [2048] Package longtable Warning: Column widths have changed (longtable) in table 47.1003 on input line 753. [2049] Underfull \vbox (badness 10000) has occurred while \output is active [2050] Underfull \vbox (badness 10000) has occurred while \output is active [2051] [2052] Package longtable Warning: Column widths have changed (longtable) in table 47.1004 on input line 1042. [2053] Underfull \vbox (badness 10000) has occurred while \output is active [2054] Underfull \vbox (badness 10000) has occurred while \output is active [2055] Underfull \vbox (badness 10000) has occurred while \output is active [2056] Package longtable Warning: Column widths have changed (longtable) in table 47.1005 on input line 1334. [2057] Package longtable Warning: Column widths have changed (longtable) in table 47.1006 on input line 1385. [2058] Package longtable Warning: Column widths have changed (longtable) in table 47.1007 on input line 1442. [2059] [2060] Package longtable Warning: Column widths have changed (longtable) in table 47.1008 on input line 1497. [2061] Package longtable Warning: Column widths have changed (longtable) in table 47.1009 on input line 1558. [2062] Package longtable Warning: Column widths have changed (longtable) in table 47.1010 on input line 1625. Package longtable Warning: Column widths have changed (longtable) in table 47.1011 on input line 1662. [2063] Underfull \vbox (badness 10000) has occurred while \output is active [2064] Underfull \vbox (badness 10000) has occurred while \output is active [2065] Underfull \vbox (badness 10000) has occurred while \output is active [2066] Package longtable Warning: Column widths have changed (longtable) in table 47.1012 on input line 1952. [2067] Underfull \vbox (badness 10000) has occurred while \output is active [2068] Underfull \vbox (badness 10000) has occurred while \output is active [2069] [2070] Package longtable Warning: Column widths have changed (longtable) in table 47.1013 on input line 2266. [2071] Underfull \vbox (badness 10000) has occurred while \output is active [2072] [2073] [2074] Package longtable Warning: Column widths have changed (longtable) in table 47.1014 on input line 2468. [2075] Underfull \vbox (badness 10000) has occurred while \output is active [2076] Underfull \vbox (badness 10000) has occurred while \output is active [2077] Package longtable Warning: Column widths have changed (longtable) in table 47.1015 on input line 2753. [2078] Package longtable Warning: Column widths have changed (longtable) in table 47.1016 on input line 2793. [2079] Underfull \vbox (badness 10000) has occurred while \output is active [2080] Package longtable Warning: Column widths have changed (longtable) in table 47.1017 on input line 2977. [2081] Package longtable Warning: Column widths have changed (longtable) in table 47.1018 on input line 3036. [2082] Underfull \vbox (badness 10000) has occurred while \output is active [2083] [2084] Package longtable Warning: Column widths have changed (longtable) in table 47.1019 on input line 3215. [2085] Package longtable Warning: Column widths have changed (longtable) in table 47.1020 on input line 3308. [2086] [2087] [2088] Package longtable Warning: Column widths have changed (longtable) in table 47.1021 on input line 3402. Package longtable Warning: Column widths have changed (longtable) in table 47.1022 on input line 3463. [2089] [2090] Package longtable Warning: Column widths have changed (longtable) in table 47.1023 on input line 3528. [2091] Package longtable Warning: Column widths have changed (longtable) in table 47.1024 on input line 3596. [2092] Package longtable Warning: Column widths have changed (longtable) in table 47.1025 on input line 3696. [2093] Package longtable Warning: Column widths have changed (longtable) in table 47.1026 on input line 3732. [2094] Package longtable Warning: Column widths have changed (longtable) in table 47.1027 on input line 3793. [2095] [2096] Package longtable Warning: Column widths have changed (longtable) in table 47.1028 on input line 3860. [2097] Package longtable Warning: Column widths have changed (longtable) in table 47.1029 on input line 3926. [2098] Package longtable Warning: Column widths have changed (longtable) in table 47.1030 on input line 3988. [2099] Package longtable Warning: Column widths have changed (longtable) in table 47.1031 on input line 4062. [2100] Package longtable Warning: Column widths have changed (longtable) in table 47.1032 on input line 4142. ) (./namespacemom__obsolete__diagnostics.tex [2101] Package longtable Warning: Column widths have changed (longtable) in table 47.1033 on input line 34. [2102] Package longtable Warning: Column widths have changed (longtable) in table 47.1034 on input line 82. ) (./namespacemom__obsolete__params.tex [2103] Package longtable Warning: Column widths have changed (longtable) in table 47.1035 on input line 36. [2104] Package longtable Warning: Column widths have changed (longtable) in table 47.1036 on input line 141. [2105] Package longtable Warning: Column widths have changed (longtable) in table 47.1037 on input line 199. [2106] Package longtable Warning: Column widths have changed (longtable) in table 47.1038 on input line 250. [2107] Package longtable Warning: Column widths have changed (longtable) in table 47.1039 on input line 318. ) (./namespacemom__ocmip2__cfc.tex [2108] [2109] Package longtable Warning: Column widths have changed (longtable) in table 47.1040 on input line 59. [2110] Package longtable Warning: Column widths have changed (longtable) in table 47.1041 on input line 125. [2111] Package longtable Warning: Column widths have changed (longtable) in table 47.1042 on input line 207. [2112] Package longtable Warning: Column widths have changed (longtable) in table 47.1043 on input line 293. Overfull \vbox (4.64684pt too high) has occurred while \output is active [2113] [2114] Package longtable Warning: Column widths have changed (longtable) in table 47.1044 on input line 395. [2115] Package longtable Warning: Column widths have changed (longtable) in table 47.1045 on input line 444. Underfull \hbox (badness 10000) detected at line 445 [][][] [2116] Package longtable Warning: Column widths have changed (longtable) in table 47.1046 on input line 521. [2117] Package longtable Warning: Column widths have changed (longtable) in table 47.1047 on input line 621. [2118] Underfull \vbox (badness 10000) has occurred while \output is active [2119] Underfull \vbox (badness 10000) has occurred while \output is active [2120]) (./namespaceMOM__oda__driver__mod.tex) (./namespacemom__oda__driver__mod.tex [2121] [2122] Package longtable Warning: Column widths have changed (longtable) in table 47.1048 on input line 73. Package longtable Warning: Column widths have changed (longtable) in table 47.1049 on input line 110. [2123] Package longtable Warning: Column widths have changed (longtable) in table 47.1050 on input line 184. [2124] Package longtable Warning: Column widths have changed (longtable) in table 47.1051 on input line 235. [2125] Underfull \vbox (badness 10000) has occurred while \output is active [2126] Underfull \vbox (badness 10000) has occurred while \output is active [2127] Package longtable Warning: Column widths have changed (longtable) in table 47.1052 on input line 448. [2128] Package longtable Warning: Column widths have changed (longtable) in table 47.1053 on input line 494. Package longtable Warning: Column widths have changed (longtable) in table 47.1054 on input line 520. [2129] Package longtable Warning: Column widths have changed (longtable) in table 47.1055 on input line 566. Package longtable Warning: Column widths have changed (longtable) in table 47.1056 on input line 621. Overfull \vbox (67.32932pt too high) has occurred while \output is active [2130]) (./namespacemom__offline__aux.tex [2131] Package longtable Warning: Column widths have changed (longtable) in table 47.1057 on input line 55. Overfull \vbox (15.37663pt too high) has occurred while \output is active [2132] [2133] Package longtable Warning: Column widths have changed (longtable) in table 47.1058 on input line 150. [2134] Package longtable Warning: Column widths have changed (longtable) in table 47.1059 on input line 270. [2135] [2136] Package longtable Warning: Column widths have changed (longtable) in table 47.1060 on input line 366. [2137] Package longtable Warning: Column widths have changed (longtable) in table 47.1061 on input line 493. Overfull \vbox (5.58195pt too high) has occurred while \output is active [2138] [2139] Package longtable Warning: Column widths have changed (longtable) in table 47.1062 on input line 620. [2140] Package longtable Warning: Column widths have changed (longtable) in table 47.1063 on input line 698. [2141] Package longtable Warning: Column widths have changed (longtable) in table 47.1064 on input line 763. [2142] [2143] [2144] Package longtable Warning: Column widths have changed (longtable) in table 47.1065 on input line 865. [2145] Package longtable Warning: Column widths have changed (longtable) in table 47.1066 on input line 983. [2146] [2147] Underfull \vbox (badness 10000) has occurred while \output is active [2148]) (./namespacemom__offline__main.tex [2149] [2150] [2151] Package longtable Warning: Column widths have changed (longtable) in table 47.1067 on input line 114. [2152] Package longtable Warning: Column widths have changed (longtable) in table 47.1068 on input line 203. Overfull \vbox (11.18053pt too high) has occurred while \output is active [2153] Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isdb[]: cs%g %iedb, cs%g %jsd[]: cs%g % jed, cs%g %ke), intent(inout) Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isd[]: cs%g %ied, cs%g %jsdb[]: cs%g %j edb, cs%g %ke), intent(inout) [2154] Package longtable Warning: Column widths have changed (longtable) in table 47.1069 on input line 286. [2155] Underfull \vbox (badness 10000) has occurred while \output is active [2156] [2157] Package longtable Warning: Column widths have changed (longtable) in table 47.1070 on input line 534. [2158] Underfull \vbox (badness 10000) has occurred while \output is active [2159] [2160] Package longtable Warning: Column widths have changed (longtable) in table 47.1071 on input line 738. [2161] [2162] Package longtable Warning: Column widths have changed (longtable) in table 47.1072 on input line 872. [2163] Package longtable Warning: Column widths have changed (longtable) in table 47.1073 on input line 952. [2164] Package longtable Warning: Column widths have changed (longtable) in table 47.1074 on input line 1015. [2165] Underfull \vbox (badness 10000) has occurred while \output is active [2166] [2167] Package longtable Warning: Column widths have changed (longtable) in table 47.1075 on input line 1229. Package longtable Warning: Column widths have changed (longtable) in table 47.1076 on input line 1283. [2168] Underfull \vbox (badness 10000) has occurred while \output is active [2169] Underfull \vbox (badness 10000) has occurred while \output is active [2170] Package longtable Warning: Column widths have changed (longtable) in table 47.1077 on input line 1485. [2171] Package longtable Warning: Column widths have changed (longtable) in table 47.1078 on input line 1537. [2172] Package longtable Warning: Column widths have changed (longtable) in table 47.1079 on input line 1599. [2173] Package longtable Warning: Column widths have changed (longtable) in table 47.1080 on input line 1679. [2174] Package longtable Warning: Column widths have changed (longtable) in table 47.1081 on input line 1736. [2175]) (./namespacemom__opacity.tex [2176] [2177] [2178] Package longtable Warning: Column widths have changed (longtable) in table 47.1082 on input line 140. [2179] Underfull \vbox (badness 10000) has occurred while \output is active [2180] Underfull \vbox (badness 10000) has occurred while \output is active [2181] Underfull \vbox (badness 10000) has occurred while \output is active [2182] Package longtable Warning: Column widths have changed (longtable) in table 47.1083 on input line 429. Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied, gv %ke ), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied), inten t(out), optional \T1/pcr/m/sl/8 pen[]S[]W[] [2183] Package longtable Warning: Column widths have changed (longtable) in table 47.1084 on input line 471. [2184] Package longtable Warning: Column widths have changed (longtable) in table 47.1085 on input line 525. Underfull \hbox (badness 10000) in paragraph at lines 548--549 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional Package longtable Warning: Column widths have changed (longtable) in table 47.1086 on input line 580. Overfull \vbox (50.97925pt too high) has occurred while \output is active [2185] [2186] Underfull \vbox (badness 10000) has occurred while \output is active [2187] Package longtable Warning: Column widths have changed (longtable) in table 47.1087 on input line 791. [2188] Underfull \vbox (badness 10000) has occurred while \output is active [2189] Underfull \vbox (badness 10000) has occurred while \output is active [2190] Package longtable Warning: Column widths have changed (longtable) in table 47.1088 on input line 1008. Underfull \hbox (badness 10000) detected at line 1009 [][][] [2191] Package longtable Warning: Column widths have changed (longtable) in table 47.1089 on input line 1038. Underfull \hbox (badness 10000) detected at line 1039 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1090 on input line 1078. Underfull \hbox (badness 10000) detected at line 1079 [][][] Underfull \hbox (badness 10000) in paragraph at lines 1098--1099 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional [2192] Package longtable Warning: Column widths have changed (longtable) in table 47.1091 on input line 1130. [2193] Underfull \vbox (badness 10000) has occurred while \output is active [2194] Package longtable Warning: Column widths have changed (longtable) in table 47.1092 on input line 1303. [2195] [2196] [2197] Package longtable Warning: Column widths have changed (longtable) in table 47.1093 on input line 1459. Underfull \hbox (badness 10000) detected at line 1460 [][][] ) (./namespacemom__open__boundary.tex [2198] [2199] [2200] Underfull \hbox (badness 862) in paragraph at lines 120--121 []\T1/phv/m/n/10 subroutine, pub-lic [][]open[]_[]boundary[]_[]register[]_[]res tarts[][] (HI, GV, O[]BC, Reg, param[]_[]file, restart[]_[][]C[]Sp, use[]_[] [2201] Underfull \hbox (badness 10000) detected at line 187 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1094 on input line 202. [2202] Underfull \vbox (badness 10000) has occurred while \output is active [2203] Package longtable Warning: Column widths have changed (longtable) in table 47.1095 on input line 322. [2204] [2205] Package longtable Warning: Column widths have changed (longtable) in table 47.1096 on input line 453. Package longtable Warning: Column widths have changed (longtable) in table 47.1097 on input line 505. Underfull \vbox (badness 10000) has occurred while \output is active [2206] Package longtable Warning: Column widths have changed (longtable) in table 47.1098 on input line 532. [2207] Package longtable Warning: Column widths have changed (longtable) in table 47.1099 on input line 618. [2208] Package longtable Warning: Column widths have changed (longtable) in table 47.1100 on input line 704. [2209] [2210] Package longtable Warning: Column widths have changed (longtable) in table 47.1101 on input line 788. [2211] Package longtable Warning: Column widths have changed (longtable) in table 47.1102 on input line 926. Underfull \vbox (badness 10000) has occurred while \output is active [2212] [2213] Package longtable Warning: Column widths have changed (longtable) in table 47.1103 on input line 1043. [2214] Underfull \vbox (badness 10000) has occurred while \output is active [2215] Underfull \vbox (badness 10000) has occurred while \output is active [2216] Underfull \vbox (badness 10000) has occurred while \output is active [2217] Package longtable Warning: Column widths have changed (longtable) in table 47.1104 on input line 1375. [2218] Package longtable Warning: Column widths have changed (longtable) in table 47.1105 on input line 1417. [2219] Underfull \vbox (badness 10000) has occurred while \output is active [2220] Package longtable Warning: Column widths have changed (longtable) in table 47.1106 on input line 1560. [2221] Package longtable Warning: Column widths have changed (longtable) in table 47.1107 on input line 1610. Package longtable Warning: Column widths have changed (longtable) in table 47.1108 on input line 1670. Overfull \vbox (39.93549pt too high) has occurred while \output is active [2222] [2223] Underfull \vbox (badness 10000) has occurred while \output is active [2224] Underfull \vbox (badness 10000) has occurred while \output is active [2225] Package longtable Warning: Column widths have changed (longtable) in table 47.1109 on input line 1982. [2226] Package longtable Warning: Column widths have changed (longtable) in table 47.1110 on input line 2025. [2227] Package longtable Warning: Column widths have changed (longtable) in table 47.1111 on input line 2057. [2228] Package longtable Warning: Column widths have changed (longtable) in table 47.1112 on input line 2189. [2229] Package longtable Warning: Column widths have changed (longtable) in table 47.1113 on input line 2260. Underfull \vbox (badness 10000) has occurred while \output is active [2230] [2231] Package longtable Warning: Column widths have changed (longtable) in table 47.1114 on input line 2364. [2232] Package longtable Warning: Column widths have changed (longtable) in table 47.1115 on input line 2420. [2233] [2234] Package longtable Warning: Column widths have changed (longtable) in table 47.1116 on input line 2559. [2235] Package longtable Warning: Column widths have changed (longtable) in table 47.1117 on input line 2627. [2236] Package longtable Warning: Column widths have changed (longtable) in table 47.1118 on input line 2692. Package longtable Warning: Column widths have changed (longtable) in table 47.1119 on input line 2746. [2237] [2238] Package longtable Warning: Column widths have changed (longtable) in table 47.1120 on input line 2840. [2239] Package longtable Warning: Column widths have changed (longtable) in table 47.1121 on input line 2907. Package longtable Warning: Column widths have changed (longtable) in table 47.1122 on input line 2952. [2240] Underfull \vbox (badness 10000) has occurred while \output is active [2241] Package longtable Warning: Column widths have changed (longtable) in table 47.1123 on input line 3068. [2242] Underfull \vbox (badness 10000) has occurred while \output is active [2243] Package longtable Warning: Column widths have changed (longtable) in table 47.1124 on input line 3222. [2244] Underfull \vbox (badness 10000) has occurred while \output is active [2245] Underfull \vbox (badness 10000) has occurred while \output is active [2246] Underfull \vbox (badness 10000) has occurred while \output is active [2247] Underfull \vbox (badness 10000) has occurred while \output is active [2248] Underfull \vbox (badness 10000) has occurred while \output is active [2249] Underfull \vbox (badness 10000) has occurred while \output is active [2250] Underfull \vbox (badness 10000) has occurred while \output is active [2251] Underfull \vbox (badness 10000) has occurred while \output is active [2252] Underfull \vbox (badness 10000) has occurred while \output is active [2253] Underfull \vbox (badness 10000) has occurred while \output is active [2254] Underfull \vbox (badness 10000) has occurred while \output is active [2255] Underfull \vbox (badness 10000) has occurred while \output is active [2256] Underfull \vbox (badness 10000) has occurred while \output is active [2257] Package longtable Warning: Column widths have changed (longtable) in table 47.1125 on input line 4362. [2258] Package longtable Warning: Column widths have changed (longtable) in table 47.1126 on input line 4405. [2259] Package longtable Warning: Column widths have changed (longtable) in table 47.1127 on input line 4455. [2260] Package longtable Warning: Column widths have changed (longtable) in table 47.1128 on input line 4539. [2261] Package longtable Warning: Column widths have changed (longtable) in table 47.1129 on input line 4600. [2262] [2263] Package longtable Warning: Column widths have changed (longtable) in table 47.1130 on input line 4711. Package longtable Warning: Column widths have changed (longtable) in table 47.1131 on input line 4765. Overfull \vbox (46.04994pt too high) has occurred while \output is active [2264] [2265] Package longtable Warning: Column widths have changed (longtable) in table 47.1132 on input line 4916. [2266] Package longtable Warning: Column widths have changed (longtable) in table 47.1133 on input line 4951. [2267] Package longtable Warning: Column widths have changed (longtable) in table 47.1134 on input line 5011. [2268] Package longtable Warning: Column widths have changed (longtable) in table 47.1135 on input line 5093. [2269] Package longtable Warning: Column widths have changed (longtable) in table 47.1136 on input line 5160. [2270] Underfull \vbox (badness 10000) has occurred while \output is active [2271] Package longtable Warning: Column widths have changed (longtable) in table 47.1137 on input line 5312. [2272] Underfull \vbox (badness 10000) has occurred while \output is active [2273] Package longtable Warning: Column widths have changed (longtable) in table 47.1138 on input line 5482. Overfull \vbox (6.87355pt too high) has occurred while \output is active [2274] [2275] [2276] Package longtable Warning: Column widths have changed (longtable) in table 47.1139 on input line 5643. [2277] Package longtable Warning: Column widths have changed (longtable) in table 47.1140 on input line 5713. [2278] Underfull \vbox (badness 10000) has occurred while \output is active [2279] Underfull \vbox (badness 10000) has occurred while \output is active [2280] Underfull \vbox (badness 10000) has occurred while \output is active [2281] Underfull \vbox (badness 10000) has occurred while \output is active [2282] Underfull \vbox (badness 10000) has occurred while \output is active [2283] Underfull \vbox (badness 10000) has occurred while \output is active [2284] Underfull \vbox (badness 10000) has occurred while \output is active [2285] Package longtable Warning: Column widths have changed (longtable) in table 47.1141 on input line 6419. [2286] [2287]) (./namespacemom__pointaccel.tex [2288] Package longtable Warning: Column widths have changed (longtable) in table 47.1142 on input line 51. [2289] Underfull \hbox (badness 10000) in paragraph at lines 118--119 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv Package longtable Warning: Column widths have changed (longtable) in table 47.1143 on input line 156. [2290] [2291] Underfull \vbox (badness 10000) has occurred while \output is active [2292] Underfull \vbox (badness 10000) has occurred while \output is active [2293] Underfull \vbox (badness 10000) has occurred while \output is active [2294] Underfull \hbox (badness 10000) in paragraph at lines 497--498 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv Package longtable Warning: Column widths have changed (longtable) in table 47.1144 on input line 535. [2295] [2296] Underfull \vbox (badness 10000) has occurred while \output is active [2297] Underfull \vbox (badness 10000) has occurred while \output is active [2298] Underfull \vbox (badness 10000) has occurred while \output is active [2299]) (./namespacemom__pressureforce.tex Underfull \hbox (badness 10000) in paragraph at lines 29--30 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [2300] Package longtable Warning: Column widths have changed (longtable) in table 47.1145 on input line 61. [2301] Package longtable Warning: Column widths have changed (longtable) in table 47.1146 on input line 124. [2302] Package longtable Warning: Column widths have changed (longtable) in table 47.1147 on input line 169. ) (./namespacemom__pressureforce__fv.tex [2303] [2304] Package longtable Warning: Column widths have changed (longtable) in table 47.1148 on input line 73. [2305] Underfull \vbox (badness 10000) has occurred while \output is active [2306] Underfull \vbox (badness 10000) has occurred while \output is active [2307] Underfull \vbox (badness 10000) has occurred while \output is active [2308] Underfull \vbox (badness 10000) has occurred while \output is active [2309] Package longtable Warning: Column widths have changed (longtable) in table 47.1149 on input line 476. [2310] Package longtable Warning: Column widths have changed (longtable) in table 47.1150 on input line 515. [2311] [2312] Package longtable Warning: Column widths have changed (longtable) in table 47.1151 on input line 640. [2313] Underfull \vbox (badness 10000) has occurred while \output is active [2314] Underfull \vbox (badness 10000) has occurred while \output is active [2315] Underfull \vbox (badness 10000) has occurred while \output is active [2316]) (./namespacemom__pressureforce__mont.tex [2317] Package longtable Warning: Column widths have changed (longtable) in table 47.1152 on input line 69. [2318] [2319] Underfull \vbox (badness 10000) has occurred while \output is active [2320] Underfull \vbox (badness 10000) has occurred while \output is active [2321] Package longtable Warning: Column widths have changed (longtable) in table 47.1153 on input line 338. [2322] [2323] Package longtable Warning: Column widths have changed (longtable) in table 47.1154 on input line 376. [2324] Package longtable Warning: Column widths have changed (longtable) in table 47.1155 on input line 486. [2325] Underfull \vbox (badness 10000) has occurred while \output is active [2326] Underfull \vbox (badness 10000) has occurred while \output is active [2327] Underfull \vbox (badness 10000) has occurred while \output is active [2328] [2329] Package longtable Warning: Column widths have changed (longtable) in table 47.1156 on input line 815. [2330] [2331] Package longtable Warning: Column widths have changed (longtable) in table 47.1157 on input line 955. [2332]) (./namespacemom__random.tex [2333] [2334] [2335] Package longtable Warning: Column widths have changed (longtable) in table 47.1158 on input line 75. Package longtable Warning: Column widths have changed (longtable) in table 47.1159 on input line 105. [2336] Package longtable Warning: Column widths have changed (longtable) in table 47.1160 on input line 141. Package longtable Warning: Column widths have changed (longtable) in table 47.1161 on input line 181. [2337] Package longtable Warning: Column widths have changed (longtable) in table 47.1162 on input line 226. [2338] Package longtable Warning: Column widths have changed (longtable) in table 47.1163 on input line 265. Package longtable Warning: Column widths have changed (longtable) in table 47.1164 on input line 291. Package longtable Warning: Column widths have changed (longtable) in table 47.1165 on input line 322. Underfull \vbox (badness 10000) has occurred while \output is active [2339] [2340] Underfull \vbox (badness 10000) has occurred while \output is active [2341] [2342] Package longtable Warning: Column widths have changed (longtable) in table 47.1166 on input line 574. Package longtable Warning: Column widths have changed (longtable) in table 47.1167 on input line 613. [2343] Package longtable Warning: Column widths have changed (longtable) in table 47.1168 on input line 655. ) (./namespacemom__regridding.tex [2344] [2345] Underfull \hbox (badness 1173) in paragraph at lines 78--79 \T1/phv/m/n/10 _[]scheme, depth[]_[]of[]_[]time[]_[]filter[]_[]shallow, depth[] _[]of[]_[]time[]_[]filter[]_[]deep, compress[]_[]fraction, ref[]_[]pressure, dz []_[] Underfull \hbox (badness 1661) in paragraph at lines 78--79 \T1/phv/m/n/10 min[]_[]surface, nz[]_[]fixed[]_[]surface, Rho[]_[][]M[]L[]_[]av g[]_[]depth, nlay[]_[][]M[]L[]_[]to[]_[]interior, fix[]_[]haloclines, halocline []_[]filt[]_[]len, [2346] [2347] Package longtable Warning: Column widths have changed (longtable) in table 47.1169 on input line 135. Underfull \hbox (badness 10000) in paragraph at lines 202--203 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [2348] Package longtable Warning: Column widths have changed (longtable) in table 47.1170 on input line 226. [2349] Package longtable Warning: Column widths have changed (longtable) in table 47.1171 on input line 311. [2350] Underfull \vbox (badness 10000) has occurred while \output is active [2351] Underfull \hbox (badness 10000) detected at line 425 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1172 on input line 446. [2352] [2353] Package longtable Warning: Column widths have changed (longtable) in table 47.1173 on input line 551. [2354] Underfull \hbox (badness 10000) in paragraph at lines 627--628 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] Package longtable Warning: Column widths have changed (longtable) in table 47.1174 on input line 651. [2355] Underfull \vbox (badness 10000) has occurred while \output is active [2356] Package longtable Warning: Column widths have changed (longtable) in table 47.1175 on input line 805. [2357] [2358] Package longtable Warning: Column widths have changed (longtable) in table 47.1176 on input line 910. [2359] Overfull \hbox (20.61044pt too wide) in paragraph at lines 1007--1008 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed,cs%nk), in tent(inout) \T1/pcr/m/sl/8 h[]_[]new \T1/pcr/m/n/8 ) [private] Package longtable Warning: Column widths have changed (longtable) in table 47.1177 on input line 1027. [2360] Package longtable Warning: Column widths have changed (longtable) in table 47.1178 on input line 1089. Overfull \vbox (26.79585pt too high) has occurred while \output is active [2361] [2362] Package longtable Warning: Column widths have changed (longtable) in table 47.1179 on input line 1172. [2363] Package longtable Warning: Column widths have changed (longtable) in table 47.1180 on input line 1254. Package longtable Warning: Column widths have changed (longtable) in table 47.1181 on input line 1297. Overfull \vbox (35.17787pt too high) has occurred while \output is active [2364] [2365] Package longtable Warning: Column widths have changed (longtable) in table 47.1182 on input line 1377. Package longtable Warning: Column widths have changed (longtable) in table 47.1183 on input line 1423. [2366] Package longtable Warning: Column widths have changed (longtable) in table 47.1184 on input line 1467. [2367] Underfull \vbox (badness 10000) has occurred while \output is active [2368] Package longtable Warning: Column widths have changed (longtable) in table 47.1185 on input line 1621. Package longtable Warning: Column widths have changed (longtable) in table 47.1186 on input line 1647. [2369] Package longtable Warning: Column widths have changed (longtable) in table 47.1187 on input line 1673. Package longtable Warning: Column widths have changed (longtable) in table 47.1188 on input line 1699. [2370] Package longtable Warning: Column widths have changed (longtable) in table 47.1189 on input line 1727. Underfull \hbox (badness 10000) detected at line 1728 [][][] [2371] Package longtable Warning: Column widths have changed (longtable) in table 47.1190 on input line 1794. Package longtable Warning: Column widths have changed (longtable) in table 47.1191 on input line 1830. [2372] Package longtable Warning: Column widths have changed (longtable) in table 47.1192 on input line 1879. [2373] Package longtable Warning: Column widths have changed (longtable) in table 47.1193 on input line 1924. Underfull \hbox (badness 10000) detected at line 1925 [][][] [2374] Package longtable Warning: Column widths have changed (longtable) in table 47.1194 on input line 1985. [2375] Package longtable Warning: Column widths have changed (longtable) in table 47.1195 on input line 2049. Package longtable Warning: Column widths have changed (longtable) in table 47.1196 on input line 2112. [2376] [2377] Underfull \vbox (badness 10000) has occurred while \output is active [2378] Underfull \vbox (badness 10000) has occurred while \output is active [2379] Underfull \vbox (badness 10000) has occurred while \output is active [2380] Underfull \vbox (badness 10000) has occurred while \output is active [2381] Underfull \vbox (badness 10000) has occurred while \output is active [2382] Underfull \vbox (badness 10000) has occurred while \output is active [2383] Package longtable Warning: Column widths have changed (longtable) in table 47.1197 on input line 2716. [2384] Underfull \vbox (badness 10000) has occurred while \output is active [2385] Package longtable Warning: Column widths have changed (longtable) in table 47.1198 on input line 2835. [2386] Package longtable Warning: Column widths have changed (longtable) in table 47.1199 on input line 2883. [2387] Package longtable Warning: Column widths have changed (longtable) in table 47.1200 on input line 2943. [2388] Package longtable Warning: Column widths have changed (longtable) in table 47.1201 on input line 3035. [2389] Underfull \vbox (badness 10000) has occurred while \output is active [2390] Package longtable Warning: Column widths have changed (longtable) in table 47.1202 on input line 3182. [2391] Package longtable Warning: Column widths have changed (longtable) in table 47.1203 on input line 3218. [2392] Package longtable Warning: Column widths have changed (longtable) in table 47.1204 on input line 3263. Package longtable Warning: Column widths have changed (longtable) in table 47.1205 on input line 3306. Underfull \hbox (badness 10000) detected at line 3307 [][][] [2393]) (./namespacemom__regularize__layers.tex [2394] Package longtable Warning: Column widths have changed (longtable) in table 47.1206 on input line 66. [2395] Underfull \vbox (badness 10000) has occurred while \output is active [2396] [2397] Overfull \hbox (32.7761pt too wide) in alignment at lines 252--252 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.1207 on input line 252. [2398] Package longtable Warning: Column widths have changed (longtable) in table 47.1208 on input line 316. [2399] Overfull \hbox (32.7761pt too wide) in alignment at lines 441--441 [] [] [] [2400] Package longtable Warning: Column widths have changed (longtable) in table 47.1209 on input line 441. [2401] Underfull \vbox (badness 10000) has occurred while \output is active [2402] Underfull \vbox (badness 10000) has occurred while \output is active [2403] Underfull \vbox (badness 10000) has occurred while \output is active [2404] Underfull \vbox (badness 10000) has occurred while \output is active [2405] Underfull \vbox (badness 10000) has occurred while \output is active [2406]) (./namespacemom__remapping.tex [2407] Underfull \hbox (badness 6893) in paragraph at lines 14--15 []\T1/phv/m/n/10 subroutine, pub-lic [][]remapping[]_[]set[]_[]param[][] (CS, r emapping[]_[]scheme, boundary[]_[]extrapolation, check[]_[] [2408] [2409] [2410] Package longtable Warning: Column widths have changed (longtable) in table 47.1210 on input line 137. [2411] Package longtable Warning: Column widths have changed (longtable) in table 47.1211 on input line 274. [2412] [2413] Package longtable Warning: Column widths have changed (longtable) in table 47.1212 on input line 385. [2414] Package longtable Warning: Column widths have changed (longtable) in table 47.1213 on input line 432. [2415] Package longtable Warning: Column widths have changed (longtable) in table 47.1214 on input line 527. [2416] Package longtable Warning: Column widths have changed (longtable) in table 47.1215 on input line 567. [2417] Package longtable Warning: Column widths have changed (longtable) in table 47.1216 on input line 609. Package longtable Warning: Column widths have changed (longtable) in table 47.1217 on input line 643. [2418] Package longtable Warning: Column widths have changed (longtable) in table 47.1218 on input line 696. [2419] Package longtable Warning: Column widths have changed (longtable) in table 47.1219 on input line 757. [2420] Underfull \vbox (badness 10000) has occurred while \output is active [2421] Underfull \vbox (badness 10000) has occurred while \output is active [2422] Underfull \vbox (badness 10000) has occurred while \output is active [2423] Underfull \hbox (badness 10000) detected at line 1070 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1220 on input line 1083. Underfull \hbox (badness 10000) detected at line 1084 [][][] [2424] Package longtable Warning: Column widths have changed (longtable) in table 47.1221 on input line 1148. [2425] Package longtable Warning: Column widths have changed (longtable) in table 47.1222 on input line 1216. Underfull \vbox (badness 10000) has occurred while \output is active [2426] Package longtable Warning: Column widths have changed (longtable) in table 47.1223 on input line 1295. [2427] [2428] Underfull \vbox (badness 10000) has occurred while \output is active [2429] Underfull \vbox (badness 10000) has occurred while \output is active [2430] Underfull \vbox (badness 10000) has occurred while \output is active [2431] Underfull \vbox (badness 10000) has occurred while \output is active [2432] [2433] Package longtable Warning: Column widths have changed (longtable) in table 47.1224 on input line 1748. [2434] Package longtable Warning: Column widths have changed (longtable) in table 47.1225 on input line 1861. [2435] Package longtable Warning: Column widths have changed (longtable) in table 47.1226 on input line 1933. Overfull \vbox (25.43697pt too high) has occurred while \output is active [2436] [2437] Package longtable Warning: Column widths have changed (longtable) in table 47.1227 on input line 2046. [2438] [2439] Package longtable Warning: Column widths have changed (longtable) in table 47.1228 on input line 2166. Package longtable Warning: Column widths have changed (longtable) in table 47.1229 on input line 2217. [2440] Underfull \vbox (badness 10000) has occurred while \output is active [2441] Underfull \vbox (badness 10000) has occurred while \output is active [2442] Underfull \vbox (badness 10000) has occurred while \output is active [2443] Package longtable Warning: Column widths have changed (longtable) in table 47.1230 on input line 2509. [2444] Package longtable Warning: Column widths have changed (longtable) in table 47.1231 on input line 2572. [2445]) (./namespacemom__restart.tex [2446] [2447] [2448] Package longtable Warning: Column widths have changed (longtable) in table 47.1232 on input line 129. Underfull \hbox (badness 10000) detected at line 130 [][][] [2449] Package longtable Warning: Column widths have changed (longtable) in table 47.1233 on input line 190. Package longtable Warning: Column widths have changed (longtable) in table 47.1234 on input line 235. Underfull \hbox (badness 10000) detected at line 236 [][][] [2450] Package longtable Warning: Column widths have changed (longtable) in table 47.1235 on input line 284. Underfull \hbox (badness 10000) detected at line 285 [][][] [2451] Underfull \vbox (badness 10000) has occurred while \output is active [2452] Package longtable Warning: Column widths have changed (longtable) in table 47.1236 on input line 444. [2453] Package longtable Warning: Column widths have changed (longtable) in table 47.1237 on input line 493. [2454] Package longtable Warning: Column widths have changed (longtable) in table 47.1238 on input line 547. [2455] Package longtable Warning: Column widths have changed (longtable) in table 47.1239 on input line 596. Package longtable Warning: Column widths have changed (longtable) in table 47.1240 on input line 651. [2456] Package longtable Warning: Column widths have changed (longtable) in table 47.1241 on input line 701. [2457] Package longtable Warning: Column widths have changed (longtable) in table 47.1242 on input line 756. [2458] Package longtable Warning: Column widths have changed (longtable) in table 47.1243 on input line 806. Package longtable Warning: Column widths have changed (longtable) in table 47.1244 on input line 861. Overfull \vbox (1.02933pt too high) has occurred while \output is active [2459] Package longtable Warning: Column widths have changed (longtable) in table 47.1245 on input line 911. [2460] Package longtable Warning: Column widths have changed (longtable) in table 47.1246 on input line 966. [2461] Package longtable Warning: Column widths have changed (longtable) in table 47.1247 on input line 1030. [2462] Package longtable Warning: Column widths have changed (longtable) in table 47.1248 on input line 1087. [2463] Package longtable Warning: Column widths have changed (longtable) in table 47.1249 on input line 1149. [2464] Package longtable Warning: Column widths have changed (longtable) in table 47.1250 on input line 1212. [2465] Package longtable Warning: Column widths have changed (longtable) in table 47.1251 on input line 1273. [2466] Package longtable Warning: Column widths have changed (longtable) in table 47.1252 on input line 1318. Package longtable Warning: Column widths have changed (longtable) in table 47.1253 on input line 1353. [2467] Package longtable Warning: Column widths have changed (longtable) in table 47.1254 on input line 1408. [2468] Package longtable Warning: Column widths have changed (longtable) in table 47.1255 on input line 1463. [2469] Package longtable Warning: Column widths have changed (longtable) in table 47.1256 on input line 1519. Package longtable Warning: Column widths have changed (longtable) in table 47.1257 on input line 1575. Underfull \vbox (badness 10000) has occurred while \output is active [2470] Package longtable Warning: Column widths have changed (longtable) in table 47.1258 on input line 1635. [2471] Package longtable Warning: Column widths have changed (longtable) in table 47.1259 on input line 1681. [2472] Package longtable Warning: Column widths have changed (longtable) in table 47.1260 on input line 1727. Package longtable Warning: Column widths have changed (longtable) in table 47.1261 on input line 1763. Underfull \vbox (badness 10000) has occurred while \output is active [2473] Package longtable Warning: Column widths have changed (longtable) in table 47.1262 on input line 1792. [2474] Package longtable Warning: Column widths have changed (longtable) in table 47.1263 on input line 1832. Underfull \hbox (badness 10000) detected at line 1833 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1264 on input line 1882. Underfull \vbox (badness 10000) has occurred while \output is active [2475] [2476] Package longtable Warning: Column widths have changed (longtable) in table 47.1265 on input line 1986. Package longtable Warning: Column widths have changed (longtable) in table 47.1266 on input line 2022. Underfull \vbox (badness 10000) has occurred while \output is active [2477] [2478] Underfull \vbox (badness 10000) has occurred while \output is active [2479] [2480] Package longtable Warning: Column widths have changed (longtable) in table 47.1267 on input line 2280. [2481] Underfull \vbox (badness 10000) has occurred while \output is active [2482] Underfull \vbox (badness 10000) has occurred while \output is active [2483]) (./namespacemom__safe__alloc.tex [2484] Package longtable Warning: Column widths have changed (longtable) in table 47.1268 on input line 59. Package longtable Warning: Column widths have changed (longtable) in table 47.1269 on input line 100. Overfull \vbox (34.4091pt too high) has occurred while \output is active [2485] Package longtable Warning: Column widths have changed (longtable) in table 47.1270 on input line 144. [2486] Package longtable Warning: Column widths have changed (longtable) in table 47.1271 on input line 181. Package longtable Warning: Column widths have changed (longtable) in table 47.1272 on input line 222. Underfull \vbox (badness 10000) has occurred while \output is active [2487] Package longtable Warning: Column widths have changed (longtable) in table 47.1273 on input line 257. [2488] Package longtable Warning: Column widths have changed (longtable) in table 47.1274 on input line 296. Package longtable Warning: Column widths have changed (longtable) in table 47.1275 on input line 334. [2489] Package longtable Warning: Column widths have changed (longtable) in table 47.1276 on input line 376. ) (./namespacemom__set__diffusivity.tex [2490] [2491] Package longtable Warning: Column widths have changed (longtable) in table 47.1277 on input line 98. [2492] Underfull \vbox (badness 10000) has occurred while \output is active [2493] Underfull \vbox (badness 10000) has occurred while \output is active [2494] [2495] Package longtable Warning: Column widths have changed (longtable) in table 47.1278 on input line 383. [2496] Underfull \vbox (badness 10000) has occurred while \output is active [2497] [2498] Package longtable Warning: Column widths have changed (longtable) in table 47.1279 on input line 583. [2499] Underfull \vbox (badness 10000) has occurred while \output is active [2500] Package longtable Warning: Column widths have changed (longtable) in table 47.1280 on input line 772. [2501] [2502] Package longtable Warning: Column widths have changed (longtable) in table 47.1281 on input line 904. [2503] [2504] Underfull \vbox (badness 10000) has occurred while \output is active [2505] Package longtable Warning: Column widths have changed (longtable) in table 47.1282 on input line 1114. [2506] [2507] Underfull \vbox (badness 10000) has occurred while \output is active [2508] [2509] Package longtable Warning: Column widths have changed (longtable) in table 47.1283 on input line 1366. [2510] Underfull \vbox (badness 10000) has occurred while \output is active [2511] [2512] Package longtable Warning: Column widths have changed (longtable) in table 47.1284 on input line 1584. [2513] [2514] Package longtable Warning: Column widths have changed (longtable) in table 47.1285 on input line 1747. [2515] Underfull \vbox (badness 10000) has occurred while \output is active [2516] Underfull \vbox (badness 10000) has occurred while \output is active [2517] Underfull \vbox (badness 10000) has occurred while \output is active [2518] Underfull \vbox (badness 10000) has occurred while \output is active [2519] Underfull \vbox (badness 10000) has occurred while \output is active [2520] Underfull \vbox (badness 10000) has occurred while \output is active [2521] Package longtable Warning: Column widths have changed (longtable) in table 47.1286 on input line 2255. Package longtable Warning: Column widths have changed (longtable) in table 47.1287 on input line 2305. [2522] [2523] Underfull \vbox (badness 10000) has occurred while \output is active [2524] Underfull \vbox (badness 10000) has occurred while \output is active [2525] Underfull \vbox (badness 10000) has occurred while \output is active [2526]) (./namespacemom__set__visc.tex [2527] Package longtable Warning: Column widths have changed (longtable) in table 47.1288 on input line 63. Underfull \hbox (badness 10000) detected at line 64 [][][] [2528] Package longtable Warning: Column widths have changed (longtable) in table 47.1289 on input line 142. Underfull \hbox (badness 10000) detected at line 143 [][][] [2529] Package longtable Warning: Column widths have changed (longtable) in table 47.1290 on input line 209. [2530] Package longtable Warning: Column widths have changed (longtable) in table 47.1291 on input line 280. Underfull \vbox (badness 10000) has occurred while \output is active [2531] [2532] Underfull \vbox (badness 10000) has occurred while \output is active [2533] Underfull \vbox (badness 10000) has occurred while \output is active [2534] Underfull \vbox (badness 10000) has occurred while \output is active [2535] Package longtable Warning: Column widths have changed (longtable) in table 47.1292 on input line 661. [2536] [2537] [2538] Package longtable Warning: Column widths have changed (longtable) in table 47.1293 on input line 797. [2539] Underfull \vbox (badness 10000) has occurred while \output is active [2540] Underfull \vbox (badness 10000) has occurred while \output is active [2541] Underfull \vbox (badness 10000) has occurred while \output is active [2542] Underfull \vbox (badness 10000) has occurred while \output is active [2543] Underfull \vbox (badness 10000) has occurred while \output is active [2544] Underfull \vbox (badness 10000) has occurred while \output is active [2545] Underfull \vbox (badness 10000) has occurred while \output is active [2546] Underfull \vbox (badness 10000) has occurred while \output is active [2547] Underfull \vbox (badness 10000) has occurred while \output is active [2548] Underfull \vbox (badness 10000) has occurred while \output is active [2549] Underfull \vbox (badness 10000) has occurred while \output is active [2550] Package longtable Warning: Column widths have changed (longtable) in table 47.1294 on input line 1762. Overfull \vbox (8.39467pt too high) has occurred while \output is active [2551] [2552] Underfull \vbox (badness 10000) has occurred while \output is active [2553] Underfull \vbox (badness 10000) has occurred while \output is active [2554] Underfull \vbox (badness 10000) has occurred while \output is active [2555] Underfull \vbox (badness 10000) has occurred while \output is active [2556] Underfull \vbox (badness 10000) has occurred while \output is active [2557] Underfull \vbox (badness 10000) has occurred while \output is active [2558] Underfull \vbox (badness 10000) has occurred while \output is active [2559]) (./namespacemom__shared__initialization.tex [2560] Package longtable Warning: Column widths have changed (longtable) in table 47.1295 on input line 72. Overfull \vbox (29.7233pt too high) has occurred while \output is active [2561] [2562] Package longtable Warning: Column widths have changed (longtable) in table 47.1296 on input line 208. [2563] Package longtable Warning: Column widths have changed (longtable) in table 47.1297 on input line 254. Underfull \hbox (badness 10000) detected at line 255 [][][] [2564] Package longtable Warning: Column widths have changed (longtable) in table 47.1298 on input line 292. [2565] Package longtable Warning: Column widths have changed (longtable) in table 47.1299 on input line 372. [2566] Package longtable Warning: Column widths have changed (longtable) in table 47.1300 on input line 445. [2567] Package longtable Warning: Column widths have changed (longtable) in table 47.1301 on input line 582. Overfull \vbox (22.05618pt too high) has occurred while \output is active [2568] Package longtable Warning: Column widths have changed (longtable) in table 47.1302 on input line 651. [2569] Underfull \hbox (badness 10000) detected at line 652 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1303 on input line 692. [2570] Package longtable Warning: Column widths have changed (longtable) in table 47.1304 on input line 750. [2571] Package longtable Warning: Column widths have changed (longtable) in table 47.1305 on input line 801. Package longtable Warning: Column widths have changed (longtable) in table 47.1306 on input line 839. [2572] Package longtable Warning: Column widths have changed (longtable) in table 47.1307 on input line 912. Underfull \vbox (badness 10000) has occurred while \output is active [2573] [2574] Package longtable Warning: Column widths have changed (longtable) in table 47.1308 on input line 1001. [2575] Underfull \vbox (badness 10000) has occurred while \output is active [2576] Underfull \vbox (badness 10000) has occurred while \output is active [2577] Package longtable Warning: Column widths have changed (longtable) in table 47.1309 on input line 1260. [2578] Underfull \vbox (badness 10000) has occurred while \output is active [2579] Package longtable Warning: Column widths have changed (longtable) in table 47.1310 on input line 1412. [2580] Package longtable Warning: Column widths have changed (longtable) in table 47.1311 on input line 1486. [2581] Package longtable Warning: Column widths have changed (longtable) in table 47.1312 on input line 1535. Package longtable Warning: Column widths have changed (longtable) in table 47.1313 on input line 1570. Underfull \vbox (badness 10000) has occurred while \output is active [2582] Package longtable Warning: Column widths have changed (longtable) in table 47.1314 on input line 1613. [2583] Underfull \vbox (badness 10000) has occurred while \output is active [2584]) (./namespacemom__spatial__means.tex [2585] Package longtable Warning: Column widths have changed (longtable) in table 47.1315 on input line 48. [2586] Package longtable Warning: Column widths have changed (longtable) in table 47.1316 on input line 124. [2587] Underfull \hbox (badness 10000) detected at line 125 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1317 on input line 180. [2588] Package longtable Warning: Column widths have changed (longtable) in table 47.1318 on input line 231. [2589] [2590] Package longtable Warning: Column widths have changed (longtable) in table 47.1319 on input line 344. [2591] Package longtable Warning: Column widths have changed (longtable) in table 47.1320 on input line 455. [2592] Package longtable Warning: Column widths have changed (longtable) in table 47.1321 on input line 519. Underfull \hbox (badness 10000) detected at line 520 [][][] [2593] Package longtable Warning: Column widths have changed (longtable) in table 47.1322 on input line 594. [2594] Underfull \hbox (badness 10000) detected at line 595 [][][] ) (./namespacemom__sponge.tex [2595] Overfull \hbox (18.3666pt too wide) in alignment at lines 73--73 [] [] [] [2596] Package longtable Warning: Column widths have changed (longtable) in table 47.1323 on input line 73. [2597] Underfull \vbox (badness 10000) has occurred while \output is active [2598] Underfull \vbox (badness 10000) has occurred while \output is active [2599] Overfull \hbox (18.3666pt too wide) in alignment at lines 371--371 [] [] [] [2600] Package longtable Warning: Column widths have changed (longtable) in table 47.1324 on input line 371. Package longtable Warning: Column widths have changed (longtable) in table 47.1325 on input line 423. Overfull \vbox (46.3142pt too high) has occurred while \output is active [2601] [2602] Package longtable Warning: Column widths have changed (longtable) in table 47.1326 on input line 553. [2603] Package longtable Warning: Column widths have changed (longtable) in table 47.1327 on input line 638. Overfull \vbox (19.83441pt too high) has occurred while \output is active [2604] Package longtable Warning: Column widths have changed (longtable) in table 47.1328 on input line 704. [2605]) (./namespacemom__state__initialization.tex [2606] [2607] Underfull \hbox (badness 10000) detected at line 79 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1329 on input line 94. [2608] Package longtable Warning: Column widths have changed (longtable) in table 47.1330 on input line 188. [2609] Package longtable Warning: Column widths have changed (longtable) in table 47.1331 on input line 233. [2610] [2611] Package longtable Warning: Column widths have changed (longtable) in table 47.1332 on input line 360. [2612] [2613] Package longtable Warning: Column widths have changed (longtable) in table 47.1333 on input line 489. [2614] Package longtable Warning: Column widths have changed (longtable) in table 47.1334 on input line 614. [2615] [2616] [2617] Package longtable Warning: Column widths have changed (longtable) in table 47.1335 on input line 755. [2618] Underfull \vbox (badness 10000) has occurred while \output is active [2619] [2620] Package longtable Warning: Column widths have changed (longtable) in table 47.1336 on input line 992. [2621] Package longtable Warning: Column widths have changed (longtable) in table 47.1337 on input line 1108. Overfull \vbox (6.23174pt too high) has occurred while \output is active [2622] [2623] Package longtable Warning: Column widths have changed (longtable) in table 47.1338 on input line 1191. [2624] Underfull \hbox (badness 10000) detected at line 1251 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1339 on input line 1266. [2625] Package longtable Warning: Column widths have changed (longtable) in table 47.1340 on input line 1359. [2626] [2627] Package longtable Warning: Column widths have changed (longtable) in table 47.1341 on input line 1473. [2628] Package longtable Warning: Column widths have changed (longtable) in table 47.1342 on input line 1576. [2629] Package longtable Warning: Column widths have changed (longtable) in table 47.1343 on input line 1660. [2630] [2631] Package longtable Warning: Column widths have changed (longtable) in table 47.1344 on input line 1753. [2632] Package longtable Warning: Column widths have changed (longtable) in table 47.1345 on input line 1824. [2633] Package longtable Warning: Column widths have changed (longtable) in table 47.1346 on input line 1892. [2634] Package longtable Warning: Column widths have changed (longtable) in table 47.1347 on input line 1978. [2635] Underfull \vbox (badness 10000) has occurred while \output is active [2636] Underfull \vbox (badness 10000) has occurred while \output is active [2637] Underfull \vbox (badness 10000) has occurred while \output is active [2638] Underfull \vbox (badness 10000) has occurred while \output is active [2639] Underfull \vbox (badness 10000) has occurred while \output is active [2640] [2641] Package longtable Warning: Column widths have changed (longtable) in table 47.1348 on input line 2505. [2642] Package longtable Warning: Column widths have changed (longtable) in table 47.1349 on input line 2598. [2643] Underfull \vbox (badness 10000) has occurred while \output is active [2644] Underfull \vbox (badness 10000) has occurred while \output is active [2645] Underfull \vbox (badness 10000) has occurred while \output is active [2646] Underfull \vbox (badness 10000) has occurred while \output is active [2647] Underfull \vbox (badness 10000) has occurred while \output is active [2648] Package longtable Warning: Column widths have changed (longtable) in table 47.1350 on input line 3099. [2649] Package longtable Warning: Column widths have changed (longtable) in table 47.1351 on input line 3133. [2650] Package longtable Warning: Column widths have changed (longtable) in table 47.1352 on input line 3181. [2651]) (./namespacemom__string__functions.tex [2652] Package longtable Warning: Column widths have changed (longtable) in table 47.1353 on input line 70. [2653] Package longtable Warning: Column widths have changed (longtable) in table 47.1354 on input line 118. [2654] Package longtable Warning: Column widths have changed (longtable) in table 47.1355 on input line 164. [2655] Package longtable Warning: Column widths have changed (longtable) in table 47.1356 on input line 221. Package longtable Warning: Column widths have changed (longtable) in table 47.1357 on input line 250. [2656] Package longtable Warning: Column widths have changed (longtable) in table 47.1358 on input line 282. Underfull \hbox (badness 10000) detected at line 283 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1359 on input line 313. Underfull \hbox (badness 10000) detected at line 314 [][][] [2657] Package longtable Warning: Column widths have changed (longtable) in table 47.1360 on input line 350. Underfull \hbox (badness 10000) detected at line 351 [][][] [2658] Package longtable Warning: Column widths have changed (longtable) in table 47.1361 on input line 425. Underfull \hbox (badness 10000) detected at line 426 [][][] [2659] [2660] Package longtable Warning: Column widths have changed (longtable) in table 47.1362 on input line 490. Package longtable Warning: Column widths have changed (longtable) in table 47.1363 on input line 528. [2661] Package longtable Warning: Column widths have changed (longtable) in table 47.1364 on input line 566. Package longtable Warning: Column widths have changed (longtable) in table 47.1365 on input line 600. Underfull \hbox (badness 10000) detected at line 601 [][][] [2662] Package longtable Warning: Column widths have changed (longtable) in table 47.1366 on input line 638. [2663] Package longtable Warning: Column widths have changed (longtable) in table 47.1367 on input line 678. Package longtable Warning: Column widths have changed (longtable) in table 47.1368 on input line 711. [2664] Package longtable Warning: Column widths have changed (longtable) in table 47.1369 on input line 773. Underfull \hbox (badness 10000) detected at line 774 [][][] ) (./namespacemom__sum__output.tex [2665] [2666] Package longtable Warning: Column widths have changed (longtable) in table 47.1370 on input line 81. [2667] Underfull \vbox (badness 10000) has occurred while \output is active [2668] Package longtable Warning: Column widths have changed (longtable) in table 47.1371 on input line 238. [2669] Underfull \vbox (badness 10000) has occurred while \output is active [2670] Package longtable Warning: Column widths have changed (longtable) in table 47.1372 on input line 385. [2671] Package longtable Warning: Column widths have changed (longtable) in table 47.1373 on input line 440. [2672] Package longtable Warning: Column widths have changed (longtable) in table 47.1374 on input line 484. Package longtable Warning: Column widths have changed (longtable) in table 47.1375 on input line 527. Underfull \vbox (badness 10000) has occurred while \output is active [2673] [2674] [2675] Package longtable Warning: Column widths have changed (longtable) in table 47.1376 on input line 699. [2676] Underfull \vbox (badness 10000) has occurred while \output is active [2677] Package longtable Warning: Column widths have changed (longtable) in table 47.1377 on input line 871. [2678] [2679] Package longtable Warning: Column widths have changed (longtable) in table 47.1378 on input line 1007. [2680] Underfull \vbox (badness 10000) has occurred while \output is active [2681] Underfull \vbox (badness 10000) has occurred while \output is active [2682] Underfull \vbox (badness 10000) has occurred while \output is active [2683] Underfull \vbox (badness 10000) has occurred while \output is active [2684] Underfull \vbox (badness 10000) has occurred while \output is active [2685] Underfull \vbox (badness 10000) has occurred while \output is active [2686] Underfull \vbox (badness 10000) has occurred while \output is active [2687]) (./namespacemom__surface__forcing.tex [2688] [2689] Package longtable Warning: Column widths have changed (longtable) in table 47.1379 on input line 87. [2690] Package longtable Warning: Column widths have changed (longtable) in table 47.1380 on input line 159. [2691] Underfull \vbox (badness 10000) has occurred while \output is active [2692] [2693] Package longtable Warning: Column widths have changed (longtable) in table 47.1381 on input line 373. [2694] Underfull \vbox (badness 10000) has occurred while \output is active [2695] Underfull \vbox (badness 10000) has occurred while \output is active [2696] [2697] Package longtable Warning: Column widths have changed (longtable) in table 47.1382 on input line 681. [2698] Package longtable Warning: Column widths have changed (longtable) in table 47.1383 on input line 790. [2699] Package longtable Warning: Column widths have changed (longtable) in table 47.1384 on input line 860. [2700] Package longtable Warning: Column widths have changed (longtable) in table 47.1385 on input line 908. [2701] Package longtable Warning: Column widths have changed (longtable) in table 47.1386 on input line 994. [2702] Package longtable Warning: Column widths have changed (longtable) in table 47.1387 on input line 1032. [2703] Package longtable Warning: Column widths have changed (longtable) in table 47.1388 on input line 1121. [2704] Underfull \vbox (badness 10000) has occurred while \output is active [2705] [2706] Package longtable Warning: Column widths have changed (longtable) in table 47.1389 on input line 1291. Package longtable Warning: Column widths have changed (longtable) in table 47.1390 on input line 1340. [2707] Underfull \vbox (badness 10000) has occurred while \output is active [2708] Underfull \vbox (badness 10000) has occurred while \output is active [2709] Underfull \vbox (badness 10000) has occurred while \output is active [2710] Underfull \vbox (badness 10000) has occurred while \output is active [2711] Underfull \vbox (badness 10000) has occurred while \output is active [2712] Package longtable Warning: Column widths have changed (longtable) in table 47.1391 on input line 1794. [2713] Package longtable Warning: Column widths have changed (longtable) in table 47.1392 on input line 1855. [2714] Package longtable Warning: Column widths have changed (longtable) in table 47.1393 on input line 1912. [2715] Package longtable Warning: Column widths have changed (longtable) in table 47.1394 on input line 2014. Overfull \vbox (27.8983pt too high) has occurred while \output is active [2716] Package longtable Warning: Column widths have changed (longtable) in table 47.1395 on input line 2084. Overfull \vbox (14.28166pt too high) has occurred while \output is active [2717] [2718] [2719] Package longtable Warning: Column widths have changed (longtable) in table 47.1396 on input line 2266. [2720]) (./namespacemom__tfreeze.tex [2721] Package longtable Warning: Column widths have changed (longtable) in table 47.1397 on input line 61. [2722] Package longtable Warning: Column widths have changed (longtable) in table 47.1398 on input line 109. [2723] Package longtable Warning: Column widths have changed (longtable) in table 47.1399 on input line 150. Package longtable Warning: Column widths have changed (longtable) in table 47.1400 on input line 192. [2724] Package longtable Warning: Column widths have changed (longtable) in table 47.1401 on input line 232. [2725] Package longtable Warning: Column widths have changed (longtable) in table 47.1402 on input line 280. ) (./namespacemom__thickness__diffuse.tex [2726] [2727] [2728] Package longtable Warning: Column widths have changed (longtable) in table 47.1404 on input line 113. [2729] Underfull \vbox (badness 10000) has occurred while \output is active [2730] Underfull \vbox (badness 10000) has occurred while \output is active [2731] Underfull \vbox (badness 10000) has occurred while \output is active [2732] Underfull \vbox (badness 10000) has occurred while \output is active [2733] Underfull \vbox (badness 10000) has occurred while \output is active [2734] Package longtable Warning: Column widths have changed (longtable) in table 47.1405 on input line 560. [2735] Package longtable Warning: Column widths have changed (longtable) in table 47.1406 on input line 634. [2736] Underfull \vbox (badness 10000) has occurred while \output is active [2737] Underfull \vbox (badness 10000) has occurred while \output is active [2738] Underfull \vbox (badness 10000) has occurred while \output is active [2739] Underfull \vbox (badness 10000) has occurred while \output is active [2740] Underfull \vbox (badness 10000) has occurred while \output is active [2741] Package longtable Warning: Column widths have changed (longtable) in table 47.1407 on input line 1097. [2742] Package longtable Warning: Column widths have changed (longtable) in table 47.1408 on input line 1156. [2743] Underfull \vbox (badness 10000) has occurred while \output is active [2744] Underfull \vbox (badness 10000) has occurred while \output is active [2745] Underfull \vbox (badness 10000) has occurred while \output is active [2746] Underfull \vbox (badness 10000) has occurred while \output is active [2747] Underfull \vbox (badness 10000) has occurred while \output is active [2748] Underfull \vbox (badness 10000) has occurred while \output is active [2749] Underfull \vbox (badness 10000) has occurred while \output is active [2750] Underfull \vbox (badness 10000) has occurred while \output is active [2751] Underfull \vbox (badness 10000) has occurred while \output is active [2752] Underfull \vbox (badness 10000) has occurred while \output is active [2753] [2754] Package longtable Warning: Column widths have changed (longtable) in table 47.1409 on input line 2075. [2755] Package longtable Warning: Column widths have changed (longtable) in table 47.1410 on input line 2129. [2756] Underfull \vbox (badness 10000) has occurred while \output is active [2757]) (./namespacemom__tidal__forcing.tex [2758] [2759] Package longtable Warning: Column widths have changed (longtable) in table 47.1411 on input line 76. [2760] [2761] Package longtable Warning: Column widths have changed (longtable) in table 47.1412 on input line 188. Package longtable Warning: Column widths have changed (longtable) in table 47.1413 on input line 237. [2762] Package longtable Warning: Column widths have changed (longtable) in table 47.1414 on input line 281. [2763] Underfull \vbox (badness 10000) has occurred while \output is active [2764] Underfull \vbox (badness 10000) has occurred while \output is active [2765] Underfull \vbox (badness 10000) has occurred while \output is active [2766] Package longtable Warning: Column widths have changed (longtable) in table 47.1415 on input line 602. ) (./namespacemom__tidal__mixing.tex [2767] [2768] [2769] Package longtable Warning: Column widths have changed (longtable) in table 47.1416 on input line 106. [2770] Underfull \vbox (badness 10000) has occurred while \output is active [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] Underfull \vbox (badness 10000) has occurred while \output is active [2773] Underfull \vbox (badness 10000) has occurred while \output is active [2774] Underfull \vbox (badness 10000) has occurred while \output is active [2775] Package longtable Warning: Column widths have changed (longtable) in table 47.1417 on input line 599. [2776] Underfull \vbox (badness 10000) has occurred while \output is active [2777] Underfull \vbox (badness 10000) has occurred while \output is active [2778] [2779] Package longtable Warning: Column widths have changed (longtable) in table 47.1418 on input line 884. [2780] Package longtable Warning: Column widths have changed (longtable) in table 47.1419 on input line 957. [2781] Package longtable Warning: Column widths have changed (longtable) in table 47.1420 on input line 1046. Overfull \vbox (10.48775pt too high) has occurred while \output is active [2782] [2783] Package longtable Warning: Column widths have changed (longtable) in table 47.1421 on input line 1184. [2784] Package longtable Warning: Column widths have changed (longtable) in table 47.1422 on input line 1235. [2785] Package longtable Warning: Column widths have changed (longtable) in table 47.1423 on input line 1338. Underfull \vbox (badness 10000) has occurred while \output is active [2786] Package longtable Warning: Column widths have changed (longtable) in table 47.1424 on input line 1378. [2787] Package longtable Warning: Column widths have changed (longtable) in table 47.1425 on input line 1426. [2788] Underfull \vbox (badness 10000) has occurred while \output is active [2789] Underfull \vbox (badness 10000) has occurred while \output is active [2790] Underfull \vbox (badness 10000) has occurred while \output is active [2791] Underfull \vbox (badness 10000) has occurred while \output is active [2792] Underfull \vbox (badness 10000) has occurred while \output is active [2793]) (./namespacemom__time__manager.tex Underfull \hbox (badness 10000) detected at line 24 [][][] [2794] Package longtable Warning: Column widths have changed (longtable) in table 47.1426 on input line 33. ) (./namespacemom__tracer__advect.tex [2795] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 h[]_[] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional \T1/pcr/m/sl/8 h[]_[] [2796] Package longtable Warning: Column widths have changed (longtable) in table 47.1427 on input line 92. [2797] Underfull \vbox (badness 10000) has occurred while \output is active [2798] Underfull \vbox (badness 10000) has occurred while \output is active [2799] Underfull \vbox (badness 10000) has occurred while \output is active [2800] Package longtable Warning: Column widths have changed (longtable) in table 47.1428 on input line 431. [2801] [2802] Underfull \vbox (badness 10000) has occurred while \output is active [2803] Underfull \vbox (badness 10000) has occurred while \output is active [2804] Underfull \vbox (badness 10000) has occurred while \output is active [2805] [2806] Package longtable Warning: Column widths have changed (longtable) in table 47.1429 on input line 850. [2807] Underfull \vbox (badness 10000) has occurred while \output is active [2808] Underfull \vbox (badness 10000) has occurred while \output is active [2809] Underfull \vbox (badness 10000) has occurred while \output is active [2810] Underfull \vbox (badness 10000) has occurred while \output is active [2811] Package longtable Warning: Column widths have changed (longtable) in table 47.1430 on input line 1241. [2812] Package longtable Warning: Column widths have changed (longtable) in table 47.1431 on input line 1277. [2813]) (./namespacemom__tracer__diabatic.tex [2814] Package longtable Warning: Column widths have changed (longtable) in table 47.1432 on input line 50. [2815] Underfull \vbox (badness 10000) has occurred while \output is active [2816] Underfull \vbox (badness 10000) has occurred while \output is active [2817] Underfull \hbox (badness 10000) in paragraph at lines 285--286 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 btm[]_[] Package longtable Warning: Column widths have changed (longtable) in table 47.1433 on input line 317. Overfull \vbox (1.75337pt too high) has occurred while \output is active [2818] [2819] Underfull \vbox (badness 10000) has occurred while \output is active [2820]) (./namespaceMOM__tracer__flow__control.tex) (./namespacemom__tracer__flow__control.tex [2821] [2822] Package longtable Warning: Column widths have changed (longtable) in table 47.1434 on input line 81. [2823] Underfull \vbox (badness 10000) has occurred while \output is active [2824] [2825] Package longtable Warning: Column widths have changed (longtable) in table 47.1435 on input line 261. [2826] Package longtable Warning: Column widths have changed (longtable) in table 47.1436 on input line 316. [2827] [2828] Package longtable Warning: Column widths have changed (longtable) in table 47.1437 on input line 460. [2829] Package longtable Warning: Column widths have changed (longtable) in table 47.1438 on input line 536. [2830] Underfull \vbox (badness 10000) has occurred while \output is active [2831] Package longtable Warning: Column widths have changed (longtable) in table 47.1439 on input line 682. [2832] Package longtable Warning: Column widths have changed (longtable) in table 47.1440 on input line 739. [2833] Package longtable Warning: Column widths have changed (longtable) in table 47.1441 on input line 798. [2834] Package longtable Warning: Column widths have changed (longtable) in table 47.1442 on input line 872. [2835] Package longtable Warning: Column widths have changed (longtable) in table 47.1443 on input line 937. [2836]) (./namespacemom__tracer__hor__diff.tex [2837] [2838] Package longtable Warning: Column widths have changed (longtable) in table 47.1444 on input line 89. [2839] Underfull \vbox (badness 10000) has occurred while \output is active [2840] Underfull \vbox (badness 10000) has occurred while \output is active [2841] Underfull \vbox (badness 10000) has occurred while \output is active [2842] Underfull \vbox (badness 10000) has occurred while \output is active [2843] Underfull \vbox (badness 10000) has occurred while \output is active [2844] Underfull \vbox (badness 10000) has occurred while \output is active [2845] Underfull \vbox (badness 10000) has occurred while \output is active [2846] Underfull \vbox (badness 10000) has occurred while \output is active [2847] Underfull \vbox (badness 10000) has occurred while \output is active [2848] Underfull \vbox (badness 10000) has occurred while \output is active [2849] Package longtable Warning: Column widths have changed (longtable) in table 47.1445 on input line 954. [2850] Package longtable Warning: Column widths have changed (longtable) in table 47.1446 on input line 995. [2851] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed), intent (in), optional \T1/pcr/m/sl/8 read[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb), intent (in), optional \T1/pcr/m/sl/8 read[]_[] [2852] Package longtable Warning: Column widths have changed (longtable) in table 47.1447 on input line 1164. [2853] Underfull \vbox (badness 10000) has occurred while \output is active [2854] Underfull \vbox (badness 10000) has occurred while \output is active [2855] Underfull \vbox (badness 10000) has occurred while \output is active [2856] Underfull \vbox (badness 10000) has occurred while \output is active [2857] Underfull \vbox (badness 10000) has occurred while \output is active [2858]) (./namespacemom__tracer__initialization__from__z.tex [2859] Package longtable Warning: Column widths have changed (longtable) in table 47.1448 on input line 60. Underfull \vbox (badness 10000) has occurred while \output is active [2860] [2861]) (./namespacemom__tracer__registry.tex Underfull \vbox (badness 10000) has occurred while \output is active [2862] [2863] Package longtable Warning: Column widths have changed (longtable) in table 47.1449 on input line 57. Package longtable Warning: Column widths have changed (longtable) in table 47.1450 on input line 94. Underfull \vbox (badness 10000) has occurred while \output is active [2864] Package longtable Warning: Column widths have changed (longtable) in table 47.1451 on input line 144. [2865] Package longtable Warning: Column widths have changed (longtable) in table 47.1452 on input line 191. [2866] Package longtable Warning: Column widths have changed (longtable) in table 47.1453 on input line 272. [2867] Package longtable Warning: Column widths have changed (longtable) in table 47.1454 on input line 332. [2868] Package longtable Warning: Column widths have changed (longtable) in table 47.1455 on input line 378. [2869] Package longtable Warning: Column widths have changed (longtable) in table 47.1456 on input line 483. [2870] [2871] Underfull \vbox (badness 10000) has occurred while \output is active [2872] [2873] Package longtable Warning: Column widths have changed (longtable) in table 47.1457 on input line 709. [2874] Underfull \vbox (badness 10000) has occurred while \output is active [2875] Underfull \vbox (badness 10000) has occurred while \output is active [2876] Underfull \vbox (badness 10000) has occurred while \output is active [2877] Package longtable Warning: Column widths have changed (longtable) in table 47.1458 on input line 1072. [2878] Package longtable Warning: Column widths have changed (longtable) in table 47.1459 on input line 1103. Package longtable Warning: Column widths have changed (longtable) in table 47.1460 on input line 1129. [2879]) (./namespacemom__tracer__z__init.tex [2880] Package longtable Warning: Column widths have changed (longtable) in table 47.1461 on input line 60. [2881] Underfull \vbox (badness 10000) has occurred while \output is active [2882] Package longtable Warning: Column widths have changed (longtable) in table 47.1462 on input line 201. Underfull \hbox (badness 10000) detected at line 202 [][][] [2883] Package longtable Warning: Column widths have changed (longtable) in table 47.1463 on input line 273. [2884] [2885] Package longtable Warning: Column widths have changed (longtable) in table 47.1464 on input line 366. [2886] [2887] Underfull \hbox (badness 10000) detected at line 505 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1465 on input line 526. [2888] Underfull \vbox (badness 10000) has occurred while \output is active [2889] Underfull \vbox (badness 10000) has occurred while \output is active [2890] [2891] Package longtable Warning: Column widths have changed (longtable) in table 47.1466 on input line 811. [2892]) (./namespacemom__transcribe__grid.tex [2893] Package longtable Warning: Column widths have changed (longtable) in table 47.1467 on input line 36. [2894] Underfull \vbox (badness 10000) has occurred while \output is active [2895] Package longtable Warning: Column widths have changed (longtable) in table 47.1468 on input line 200. [2896] Underfull \vbox (badness 10000) has occurred while \output is active [2897] Package longtable Warning: Column widths have changed (longtable) in table 47.1469 on input line 363. [2898]) (./namespacemom__transform__fms.tex [2899] [2900] Package longtable Warning: Column widths have changed (longtable) in table 47.1470 on input line 81. ) (./namespacemom__unit__scaling.tex [2901] Package longtable Warning: Column widths have changed (longtable) in table 47.1471 on input line 37. Package longtable Warning: Column widths have changed (longtable) in table 47.1472 on input line 67. [2902] Package longtable Warning: Column widths have changed (longtable) in table 47.1473 on input line 95. [2903]) (./namespacemom__unit__tests.tex [2904] Package longtable Warning: Column widths have changed (longtable) in table 47.1474 on input line 28. ) (./namespacemom__variables.tex [2905] [2906] Package longtable Warning: Column widths have changed (longtable) in table 47.1475 on input line 64. [2907] Package longtable Warning: Column widths have changed (longtable) in table 47.1476 on input line 132. [2908] Package longtable Warning: Column widths have changed (longtable) in table 47.1477 on input line 232. [2909] Package longtable Warning: Column widths have changed (longtable) in table 47.1478 on input line 271. Package longtable Warning: Column widths have changed (longtable) in table 47.1479 on input line 318. [2910]) (./namespacemom__vert__friction.tex Underfull \hbox (badness 10000) detected at line 8 [][][] Underfull \hbox (badness 10000) detected at line 11 [][][] [2911] [2912] Package longtable Warning: Column widths have changed (longtable) in table 47.1480 on input line 110. [2913] Underfull \vbox (badness 10000) has occurred while \output is active [2914] Underfull \vbox (badness 10000) has occurred while \output is active [2915] Underfull \vbox (badness 10000) has occurred while \output is active [2916] Package longtable Warning: Column widths have changed (longtable) in table 47.1481 on input line 408. [2917] Package longtable Warning: Column widths have changed (longtable) in table 47.1482 on input line 496. [2918] [2919] Underfull \vbox (badness 10000) has occurred while \output is active [2920] Underfull \vbox (badness 10000) has occurred while \output is active [2921] Underfull \vbox (badness 10000) has occurred while \output is active [2922] [2923] Package longtable Warning: Column widths have changed (longtable) in table 47.1483 on input line 882. [2924] Underfull \vbox (badness 10000) has occurred while \output is active [2925] Underfull \vbox (badness 10000) has occurred while \output is active [2926] Underfull \vbox (badness 10000) has occurred while \output is active [2927] Underfull \vbox (badness 10000) has occurred while \output is active [2928] Underfull \vbox (badness 10000) has occurred while \output is active [2929] Package longtable Warning: Column widths have changed (longtable) in table 47.1484 on input line 1373. [2930] Package longtable Warning: Column widths have changed (longtable) in table 47.1485 on input line 1423. [2931] Underfull \vbox (badness 10000) has occurred while \output is active [2932] Underfull \vbox (badness 10000) has occurred while \output is active [2933] [2934] Package longtable Warning: Column widths have changed (longtable) in table 47.1486 on input line 1733. [2935] Underfull \vbox (badness 10000) has occurred while \output is active [2936] Underfull \vbox (badness 10000) has occurred while \output is active [2937] Underfull \hbox (badness 10000) in paragraph at lines 1952--1953 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, gv %ke) , intent(inout) \T1/pcr/m/sl/8 visc[]_[] Package longtable Warning: Column widths have changed (longtable) in table 47.1487 on input line 1976. [2938] Underfull \vbox (badness 10000) has occurred while \output is active [2939]) (./namespacemom__verticalgrid.tex [2940] Package longtable Warning: Column widths have changed (longtable) in table 47.1488 on input line 45. Underfull \hbox (badness 10000) detected at line 66 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1489 on input line 73. Underfull \hbox (badness 10000) detected at line 102 [][][] [2941] Package longtable Warning: Column widths have changed (longtable) in table 47.1490 on input line 109. Underfull \hbox (badness 10000) detected at line 138 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1491 on input line 151. [2942] Package longtable Warning: Column widths have changed (longtable) in table 47.1492 on input line 229. [2943] Package longtable Warning: Column widths have changed (longtable) in table 47.1493 on input line 270. [2944] Package longtable Warning: Column widths have changed (longtable) in table 47.1494 on input line 302. [2945]) (./namespacemom__wave__interface.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [2946] [2947] [2948] Package longtable Warning: Column widths have changed (longtable) in table 47.1495 on input line 144. Underfull \vbox (badness 10000) has occurred while \output is active [2949] Package longtable Warning: Column widths have changed (longtable) in table 47.1496 on input line 211. Underfull \vbox (badness 10000) has occurred while \output is active [2950] [2951] Package longtable Warning: Column widths have changed (longtable) in table 47.1497 on input line 311. [2952] [2953] Package longtable Warning: Column widths have changed (longtable) in table 47.1498 on input line 448. [2954] Package longtable Warning: Column widths have changed (longtable) in table 47.1499 on input line 502. [2955] Package longtable Warning: Column widths have changed (longtable) in table 47.1500 on input line 596. [2956] [2957] Package longtable Warning: Column widths have changed (longtable) in table 47.1501 on input line 705. [2958] Underfull \vbox (badness 10000) has occurred while \output is active [2959] Underfull \vbox (badness 10000) has occurred while \output is active [2960] Package longtable Warning: Column widths have changed (longtable) in table 47.1502 on input line 939. [2961] Package longtable Warning: Column widths have changed (longtable) in table 47.1503 on input line 996. [2962] Package longtable Warning: Column widths have changed (longtable) in table 47.1504 on input line 1085. [2963] Underfull \vbox (badness 10000) has occurred while \output is active [2964] Package longtable Warning: Column widths have changed (longtable) in table 47.1505 on input line 1278. [2965] Underfull \vbox (badness 10000) has occurred while \output is active [2966] Underfull \vbox (badness 10000) has occurred while \output is active [2967] [2968] Package longtable Warning: Column widths have changed (longtable) in table 47.1506 on input line 1536. [2969] Package longtable Warning: Column widths have changed (longtable) in table 47.1507 on input line 1601. [2970] [2971] Package longtable Warning: Column widths have changed (longtable) in table 47.1508 on input line 1665. [2972] [2973] [2974] [2975] [2976] [2977] [2978] [2979]) (./namespacemom__wave__speed.tex [2980] Package longtable Warning: Column widths have changed (longtable) in table 47.1509 on input line 51. Underfull \vbox (badness 10000) has occurred while \output is active [2981] [2982] Package longtable Warning: Column widths have changed (longtable) in table 47.1510 on input line 131. Underfull \hbox (badness 10000) in paragraph at lines 183--184 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [2983] Package longtable Warning: Column widths have changed (longtable) in table 47.1511 on input line 221. [2984] Underfull \vbox (badness 10000) has occurred while \output is active [2985] Underfull \vbox (badness 10000) has occurred while \output is active [2986] Underfull \vbox (badness 10000) has occurred while \output is active [2987] Underfull \vbox (badness 10000) has occurred while \output is active [2988] Underfull \vbox (badness 10000) has occurred while \output is active [2989] Underfull \vbox (badness 10000) has occurred while \output is active [2990] Package longtable Warning: Column widths have changed (longtable) in table 47.1512 on input line 785. Overfull \vbox (20.3618pt too high) has occurred while \output is active [2991] Package longtable Warning: Column widths have changed (longtable) in table 47.1513 on input line 862. [2992] [2993] Package longtable Warning: Column widths have changed (longtable) in table 47.1514 on input line 937. [2994] Underfull \vbox (badness 10000) has occurred while \output is active [2995] Underfull \vbox (badness 10000) has occurred while \output is active [2996] Underfull \vbox (badness 10000) has occurred while \output is active [2997] Underfull \vbox (badness 10000) has occurred while \output is active [2998] Underfull \vbox (badness 10000) has occurred while \output is active [2999]) (./namespacemom__wave__structure.tex [3000] Package longtable Warning: Column widths have changed (longtable) in table 47.1515 on input line 49. [3001] Underfull \vbox (badness 10000) has occurred while \output is active [3002] [3003] Package longtable Warning: Column widths have changed (longtable) in table 47.1516 on input line 225. [3004] Underfull \vbox (badness 10000) has occurred while \output is active [3005] Underfull \vbox (badness 10000) has occurred while \output is active [3006] Underfull \vbox (badness 10000) has occurred while \output is active [3007] Underfull \vbox (badness 10000) has occurred while \output is active [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] Package longtable Warning: Column widths have changed (longtable) in table 47.1517 on input line 721. [3010]) (./namespacemom__write__cputime.tex [3011] Package longtable Warning: Column widths have changed (longtable) in table 47.1518 on input line 52. [3012] Package longtable Warning: Column widths have changed (longtable) in table 47.1519 on input line 93. [3013] Package longtable Warning: Column widths have changed (longtable) in table 47.1520 on input line 170. [3014] Package longtable Warning: Column widths have changed (longtable) in table 47.1521 on input line 278. ) (./namespaceneverworld__initialization.tex [3015] [3016] Package longtable Warning: Column widths have changed (longtable) in table 47.1522 on input line 64. Package longtable Warning: Column widths have changed (longtable) in table 47.1523 on input line 105. [3017] Package longtable Warning: Column widths have changed (longtable) in table 47.1524 on input line 136. Package longtable Warning: Column widths have changed (longtable) in table 47.1525 on input line 176. Overfull \vbox (66.35884pt too high) has occurred while \output is active [3018] Package longtable Warning: Column widths have changed (longtable) in table 47.1526 on input line 217. [3019] Package longtable Warning: Column widths have changed (longtable) in table 47.1527 on input line 258. Package longtable Warning: Column widths have changed (longtable) in table 47.1528 on input line 300. Overfull \vbox (59.03142pt too high) has occurred while \output is active [3020] Package longtable Warning: Column widths have changed (longtable) in table 47.1529 on input line 345. [3021] Package longtable Warning: Column widths have changed (longtable) in table 47.1530 on input line 438. Overfull \vbox (35.34378pt too high) has occurred while \output is active [3022] [3023] Package longtable Warning: Column widths have changed (longtable) in table 47.1531 on input line 524. Package longtable Warning: Column widths have changed (longtable) in table 47.1532 on input line 569. Underfull \vbox (badness 10000) has occurred while \output is active [3024] Package longtable Warning: Column widths have changed (longtable) in table 47.1533 on input line 606. [3025] Package longtable Warning: Column widths have changed (longtable) in table 47.1534 on input line 637. ) (./namespaceocean__da__core__mod.tex Package longtable Warning: Column widths have changed (longtable) in table 47.1535 on input line 34. Overfull \vbox (24.63379pt too high) has occurred while \output is active [3026] Package longtable Warning: Column widths have changed (longtable) in table 47.1536 on input line 71. ) (./namespaceocean__da__types__mod.tex [3027]) (./namespaceocean__model__mod.tex [3028] Package longtable Warning: Column widths have changed (longtable) in table 47.1537 on input line 75. [3029] [3030] Package longtable Warning: Column widths have changed (longtable) in table 47.1538 on input line 201. [3031] Package longtable Warning: Column widths have changed (longtable) in table 47.1539 on input line 238. [3032] Package longtable Warning: Column widths have changed (longtable) in table 47.1540 on input line 316. [3033] Package longtable Warning: Column widths have changed (longtable) in table 47.1541 on input line 365. [3034] Package longtable Warning: Column widths have changed (longtable) in table 47.1542 on input line 449. [3035] Package longtable Warning: Column widths have changed (longtable) in table 47.1543 on input line 484. Package longtable Warning: Column widths have changed (longtable) in table 47.1544 on input line 532. [3036] [3037] Package longtable Warning: Column widths have changed (longtable) in table 47.1545 on input line 623. [3038] Underfull \vbox (badness 10000) has occurred while \output is active [3039] [3040] Package longtable Warning: Column widths have changed (longtable) in table 47.1546 on input line 833. Package longtable Warning: Column widths have changed (longtable) in table 47.1547 on input line 871. [3041] Package longtable Warning: Column widths have changed (longtable) in table 47.1548 on input line 931. [3042] Package longtable Warning: Column widths have changed (longtable) in table 47.1549 on input line 989. [3043] Package longtable Warning: Column widths have changed (longtable) in table 47.1550 on input line 1037. [3044] Package longtable Warning: Column widths have changed (longtable) in table 47.1551 on input line 1116. [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] Underfull \vbox (badness 10000) has occurred while \output is active [3047]) (./namespaceoil__tracer.tex [3048] [3049] Package longtable Warning: Column widths have changed (longtable) in table 47.1552 on input line 73. [3050] [3051] Package longtable Warning: Column widths have changed (longtable) in table 47.1553 on input line 200. Underfull \hbox (badness 10000) detected at line 201 [][][] [3052] Package longtable Warning: Column widths have changed (longtable) in table 47.1554 on input line 295. [3053] Underfull \vbox (badness 10000) has occurred while \output is active [3054] Package longtable Warning: Column widths have changed (longtable) in table 47.1555 on input line 419. [3055] Package longtable Warning: Column widths have changed (longtable) in table 47.1556 on input line 455. Package longtable Warning: Column widths have changed (longtable) in table 47.1557 on input line 516. Overfull \vbox (55.07356pt too high) has occurred while \output is active [3056] [3057]) (./namespacep1m__functions.tex [3058] Package longtable Warning: Column widths have changed (longtable) in table 47.1558 on input line 48. [3059] [3060] [3061] Package longtable Warning: Column widths have changed (longtable) in table 47.1559 on input line 164. ) (./namespacep3m__functions.tex [3062] Package longtable Warning: Column widths have changed (longtable) in table 47.1560 on input line 65. Overfull \vbox (44.4672pt too high) has occurred while \output is active [3063] Package longtable Warning: Column widths have changed (longtable) in table 47.1561 on input line 123. [3064] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] Package longtable Warning: Column widths have changed (longtable) in table 47.1562 on input line 185. [3065] Underfull \vbox (badness 10000) has occurred while \output is active [3066] [3067] Package longtable Warning: Column widths have changed (longtable) in table 47.1563 on input line 362. [3068] Underfull \vbox (badness 10000) has occurred while \output is active [3069] Package longtable Warning: Column widths have changed (longtable) in table 47.1564 on input line 545. [3070] Package longtable Warning: Column widths have changed (longtable) in table 47.1565 on input line 609. Overfull \vbox (8.10031pt too high) has occurred while \output is active [3071] [3072]) (./namespacePCM__functions.tex) (./namespacepcm__functions.tex [3073] Package longtable Warning: Column widths have changed (longtable) in table 47.1566 on input line 36. ) (./namespacephillips__initialization.tex [3074] [3075] Package longtable Warning: Column widths have changed (longtable) in table 47.1567 on input line 56. [3076] Package longtable Warning: Column widths have changed (longtable) in table 47.1568 on input line 166. [3077] [3078] Package longtable Warning: Column widths have changed (longtable) in table 47.1569 on input line 275. [3079] Package longtable Warning: Column widths have changed (longtable) in table 47.1570 on input line 356. [3080] Package longtable Warning: Column widths have changed (longtable) in table 47.1571 on input line 453. Underfull \hbox (badness 10000) detected at line 454 [][][] ) (./namespaceplm__functions.tex [3081] [3082] Package longtable Warning: Column widths have changed (longtable) in table 47.1572 on input line 64. [3083] Package longtable Warning: Column widths have changed (longtable) in table 47.1573 on input line 128. [3084] Package longtable Warning: Column widths have changed (longtable) in table 47.1574 on input line 178. [3085] Package longtable Warning: Column widths have changed (longtable) in table 47.1575 on input line 246. [3086] Package longtable Warning: Column widths have changed (longtable) in table 47.1576 on input line 349. [3087] [3088] Package longtable Warning: Column widths have changed (longtable) in table 47.1577 on input line 433. ) (./namespacepolynomial__functions.tex [3089] Package longtable Warning: Column widths have changed (longtable) in table 47.1578 on input line 42. [3090] Package longtable Warning: Column widths have changed (longtable) in table 47.1579 on input line 84. [3091] Package longtable Warning: Column widths have changed (longtable) in table 47.1580 on input line 128. ) (./namespaceppm__functions.tex [3092] Package longtable Warning: Column widths have changed (longtable) in table 47.1581 on input line 47. [3093] Underfull \vbox (badness 10000) has occurred while \output is active [3094] [3095] Package longtable Warning: Column widths have changed (longtable) in table 47.1582 on input line 230. [3096] Package longtable Warning: Column widths have changed (longtable) in table 47.1583 on input line 329. [3097] Underfull \hbox (badness 10000) detected at line 378 [][][] ) (./namespacepqm__functions.tex [3098] Package longtable Warning: Column widths have changed (longtable) in table 47.1584 on input line 58. [3099] Underfull \vbox (badness 10000) has occurred while \output is active [3100] [3101] Package longtable Warning: Column widths have changed (longtable) in table 47.1585 on input line 226. [3102] Underfull \vbox (badness 10000) has occurred while \output is active [3103] Underfull \vbox (badness 10000) has occurred while \output is active [3104] Underfull \vbox (badness 10000) has occurred while \output is active [3105] Package longtable Warning: Column widths have changed (longtable) in table 47.1586 on input line 591. [3106] Underfull \vbox (badness 10000) has occurred while \output is active [3107] Underfull \vbox (badness 10000) has occurred while \output is active [3108] Underfull \vbox (badness 10000) has occurred while \output is active [3109] Package longtable Warning: Column widths have changed (longtable) in table 47.1587 on input line 890. [3110]) (./namespacepseudo__salt__tracer.tex [3111] Package longtable Warning: Column widths have changed (longtable) in table 47.1588 on input line 65. Overfull \vbox (50.21103pt too high) has occurred while \output is active [3112] [3113] Package longtable Warning: Column widths have changed (longtable) in table 47.1589 on input line 156. Underfull \hbox (badness 10000) detected at line 157 [][][] [3114] Package longtable Warning: Column widths have changed (longtable) in table 47.1590 on input line 252. [3115] [3116] Package longtable Warning: Column widths have changed (longtable) in table 47.1591 on input line 347. Package longtable Warning: Column widths have changed (longtable) in table 47.1592 on input line 384. [3117] Package longtable Warning: Column widths have changed (longtable) in table 47.1593 on input line 435. [3118]) (./namespaceregional__dyes.tex [3119] Package longtable Warning: Column widths have changed (longtable) in table 47.1594 on input line 59. Underfull \hbox (badness 10000) detected at line 60 [][][] [3120] [3121] Package longtable Warning: Column widths have changed (longtable) in table 47.1595 on input line 148. [3122] Package longtable Warning: Column widths have changed (longtable) in table 47.1596 on input line 251. [3123] Package longtable Warning: Column widths have changed (longtable) in table 47.1597 on input line 316. [3124] Package longtable Warning: Column widths have changed (longtable) in table 47.1598 on input line 390. [3125] Package longtable Warning: Column widths have changed (longtable) in table 47.1599 on input line 432. [3126] Underfull \vbox (badness 10000) has occurred while \output is active [3127]) (./namespaceregrid__consts.tex [3128] Underfull \hbox (badness 10000) detected at line 102 [][][] [3129] Package longtable Warning: Column widths have changed (longtable) in table 47.1600 on input line 109. Underfull \hbox (badness 10000) detected at line 143 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1601 on input line 150. [3130] Underfull \hbox (badness 10000) detected at line 182 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1602 on input line 189. Package longtable Warning: Column widths have changed (longtable) in table 47.1603 on input line 216. [3131] Package longtable Warning: Column widths have changed (longtable) in table 47.1604 on input line 242. ) (./namespaceregrid__edge__values.tex [3132] Package longtable Warning: Column widths have changed (longtable) in table 47.1605 on input line 68. [3133] Package longtable Warning: Column widths have changed (longtable) in table 47.1606 on input line 122. [3134] [3135] Package longtable Warning: Column widths have changed (longtable) in table 47.1607 on input line 214. [3136] Package longtable Warning: Column widths have changed (longtable) in table 47.1608 on input line 277. [3137] Underfull \vbox (badness 10000) has occurred while \output is active [3138] Package longtable Warning: Column widths have changed (longtable) in table 47.1609 on input line 473. [3139] Underfull \vbox (badness 10000) has occurred while \output is active [3140] Underfull \vbox (badness 10000) has occurred while \output is active [3141] [3142] Package longtable Warning: Column widths have changed (longtable) in table 47.1610 on input line 741. [3143] Package longtable Warning: Column widths have changed (longtable) in table 47.1611 on input line 806. [3144] Underfull \vbox (badness 10000) has occurred while \output is active [3145] Package longtable Warning: Column widths have changed (longtable) in table 47.1612 on input line 988. Underfull \vbox (badness 10000) has occurred while \output is active [3146] [3147] Underfull \vbox (badness 10000) has occurred while \output is active [3148] Package longtable Warning: Column widths have changed (longtable) in table 47.1613 on input line 1195. Underfull \vbox (badness 10000) has occurred while \output is active [3149] [3150] Underfull \vbox (badness 10000) has occurred while \output is active [3151] Package longtable Warning: Column widths have changed (longtable) in table 47.1614 on input line 1422. [3152] Underfull \vbox (badness 10000) has occurred while \output is active [3153] Package longtable Warning: Column widths have changed (longtable) in table 47.1615 on input line 1571. [3154] [3155] Package longtable Warning: Column widths have changed (longtable) in table 47.1616 on input line 1660. [3156] [3157] Package longtable Warning: Column widths have changed (longtable) in table 47.1617 on input line 1727. ) (./namespaceregrid__interp.tex [3158] [3159] Package longtable Warning: Column widths have changed (longtable) in table 47.1618 on input line 126. [3160] [3161] Package longtable Warning: Column widths have changed (longtable) in table 47.1619 on input line 196. Underfull \hbox (badness 10000) detected at line 197 [][][] [3162] Underfull \vbox (badness 10000) has occurred while \output is active [3163] Package longtable Warning: Column widths have changed (longtable) in table 47.1620 on input line 376. [3164] Package longtable Warning: Column widths have changed (longtable) in table 47.1621 on input line 430. [3165] Package longtable Warning: Column widths have changed (longtable) in table 47.1622 on input line 490. [3166] Underfull \vbox (badness 10000) has occurred while \output is active [3167] Underfull \vbox (badness 10000) has occurred while \output is active [3168] Package longtable Warning: Column widths have changed (longtable) in table 47.1623 on input line 720. [3169] Package longtable Warning: Column widths have changed (longtable) in table 47.1624 on input line 749. ) (./namespaceregrid__solvers.tex [3170] Package longtable Warning: Column widths have changed (longtable) in table 47.1625 on input line 46. [3171] Package longtable Warning: Column widths have changed (longtable) in table 47.1626 on input line 133. [3172] Package longtable Warning: Column widths have changed (longtable) in table 47.1627 on input line 198. [3173] Underfull \vbox (badness 10000) has occurred while \output is active [3174] Package longtable Warning: Column widths have changed (longtable) in table 47.1628 on input line 320. [3175]) (./namespacergc__tracer.tex [3176] Package longtable Warning: Column widths have changed (longtable) in table 47.1629 on input line 63. [3177] Underfull \vbox (badness 10000) has occurred while \output is active [3178] Package longtable Warning: Column widths have changed (longtable) in table 47.1630 on input line 210. [3179] [3180] Package longtable Warning: Column widths have changed (longtable) in table 47.1631 on input line 336. [3181] Package longtable Warning: Column widths have changed (longtable) in table 47.1632 on input line 416. ) (./namespacerossby__front__2d__initialization.tex [3182] [3183] Package longtable Warning: Column widths have changed (longtable) in table 47.1633 on input line 64. Package longtable Warning: Column widths have changed (longtable) in table 47.1634 on input line 100. Underfull \vbox (badness 10000) has occurred while \output is active [3184] Package longtable Warning: Column widths have changed (longtable) in table 47.1635 on input line 144. [3185] Package longtable Warning: Column widths have changed (longtable) in table 47.1636 on input line 223. [3186] [3187] Package longtable Warning: Column widths have changed (longtable) in table 47.1637 on input line 329. [3188] Package longtable Warning: Column widths have changed (longtable) in table 47.1638 on input line 411. ) (./namespacescm__cvmix__tests.tex [3189] Package longtable Warning: Column widths have changed (longtable) in table 47.1639 on input line 51. [3190] Package longtable Warning: Column widths have changed (longtable) in table 47.1640 on input line 127. [3191] [3192] Package longtable Warning: Column widths have changed (longtable) in table 47.1641 on input line 235. [3193] Package longtable Warning: Column widths have changed (longtable) in table 47.1642 on input line 334. [3194]) (./namespaceseamount__initialization.tex [3195] Package longtable Warning: Column widths have changed (longtable) in table 47.1643 on input line 52. [3196] [3197] Package longtable Warning: Column widths have changed (longtable) in table 47.1644 on input line 175. [3198] Package longtable Warning: Column widths have changed (longtable) in table 47.1645 on input line 314. Overfull \vbox (27.34378pt too high) has occurred while \output is active [3199]) (./namespaceshelfwave__initialization.tex [3200] Package longtable Warning: Column widths have changed (longtable) in table 47.1646 on input line 49. [3201] Package longtable Warning: Column widths have changed (longtable) in table 47.1647 on input line 120. [3202] Package longtable Warning: Column widths have changed (longtable) in table 47.1648 on input line 169. Overfull \hbox (16.48654pt too wide) in alignment at lines 204--204 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.1649 on input line 204. [3203]) (./namespacesloshing__initialization.tex [3204] Package longtable Warning: Column widths have changed (longtable) in table 47.1650 on input line 50. [3205] [3206] Package longtable Warning: Column widths have changed (longtable) in table 47.1651 on input line 154. [3207] [3208] Package longtable Warning: Column widths have changed (longtable) in table 47.1652 on input line 296. ) (./namespacesoliton__initialization.tex [3209] Package longtable Warning: Column widths have changed (longtable) in table 47.1653 on input line 45. [3210] Package longtable Warning: Column widths have changed (longtable) in table 47.1654 on input line 106. ) (./namespacesupercritical__initialization.tex [3211] Underfull \hbox (badness 3590) in paragraph at lines 8--8 []\T1/phv/m/n/10 The mod-ule con-fig-ures the model for the "su-per-crit-i-cal" ex-per-i-ment. [][]\T1/pcr/m/n/10 https[]://marine.[]rutgers.[] Package longtable Warning: Column widths have changed (longtable) in table 47.1655 on input line 34. [3212]) (./namespacetidal__bay__initialization.tex [3213] Package longtable Warning: Column widths have changed (longtable) in table 47.1656 on input line 41. Package longtable Warning: Column widths have changed (longtable) in table 47.1657 on input line 80. Underfull \vbox (badness 10000) has occurred while \output is active [3214] Overfull \hbox (16.48654pt too wide) in alignment at lines 115--115 [] [] [] Package longtable Warning: Column widths have changed (longtable) in table 47.1658 on input line 115. [3215]) (./namespacetidal__forcing.tex) (./namespaceuser__change__diffusivity.tex [3216] Package longtable Warning: Column widths have changed (longtable) in table 47.1659 on input line 41. Underfull \hbox (badness 10000) detected at line 42 [][][] [3217] Package longtable Warning: Column widths have changed (longtable) in table 47.1660 on input line 92. [3218] Underfull \vbox (badness 10000) has occurred while \output is active [3219] Package longtable Warning: Column widths have changed (longtable) in table 47.1661 on input line 216. [3220] Package longtable Warning: Column widths have changed (longtable) in table 47.1662 on input line 255. [3221] Package longtable Warning: Column widths have changed (longtable) in table 47.1663 on input line 347. Underfull \hbox (badness 10000) detected at line 348 [][][] ) (./namespaceuser__initialization.tex [3222] [3223] Package longtable Warning: Column widths have changed (longtable) in table 47.1664 on input line 82. Overfull \vbox (51.4922pt too high) has occurred while \output is active [3224] Package longtable Warning: Column widths have changed (longtable) in table 47.1665 on input line 141. [3225] Package longtable Warning: Column widths have changed (longtable) in table 47.1666 on input line 192. [3226] Package longtable Warning: Column widths have changed (longtable) in table 47.1667 on input line 245. [3227] Package longtable Warning: Column widths have changed (longtable) in table 47.1668 on input line 292. [3228] Package longtable Warning: Column widths have changed (longtable) in table 47.1669 on input line 349. Package longtable Warning: Column widths have changed (longtable) in table 47.1670 on input line 397. Underfull \vbox (badness 10000) has occurred while \output is active [3229] Package longtable Warning: Column widths have changed (longtable) in table 47.1671 on input line 435. [3230] Package longtable Warning: Column widths have changed (longtable) in table 47.1672 on input line 465. ) (./namespaceuser__revise__forcing.tex [3231] Package longtable Warning: Column widths have changed (longtable) in table 47.1673 on input line 49. [3232] Package longtable Warning: Column widths have changed (longtable) in table 47.1674 on input line 84. ) (./namespaceuser__shelf__init.tex [3233] Package longtable Warning: Column widths have changed (longtable) in table 47.1675 on input line 49. [3234] Package longtable Warning: Column widths have changed (longtable) in table 47.1676 on input line 106. [3235] Package longtable Warning: Column widths have changed (longtable) in table 47.1677 on input line 198. [3236] [3237] [3238] Package longtable Warning: Column widths have changed (longtable) in table 47.1678 on input line 294. ) (./namespaceuser__surface__forcing.tex [3239] Package longtable Warning: Column widths have changed (longtable) in table 47.1679 on input line 49. [3240] Underfull \vbox (badness 10000) has occurred while \output is active [3241] Package longtable Warning: Column widths have changed (longtable) in table 47.1680 on input line 213. [3242] Package longtable Warning: Column widths have changed (longtable) in table 47.1681 on input line 296. [3243]) (./namespaceuser__tracer__example.tex [3244] [3245] Package longtable Warning: Column widths have changed (longtable) in table 47.1682 on input line 73. [3246] Package longtable Warning: Column widths have changed (longtable) in table 47.1683 on input line 204. [3247] [3248] [3249] Package longtable Warning: Column widths have changed (longtable) in table 47.1684 on input line 351. [3250] Package longtable Warning: Column widths have changed (longtable) in table 47.1685 on input line 451. [3251] Package longtable Warning: Column widths have changed (longtable) in table 47.1686 on input line 495. Underfull \hbox (badness 10000) detected at line 496 [][][] [3252] Package longtable Warning: Column widths have changed (longtable) in table 47.1687 on input line 569. ) (./namespacewrite__ocean__obs__mod.tex [3253] Package longtable Warning: Column widths have changed (longtable) in table 47.1688 on input line 35. [3254] Package longtable Warning: Column widths have changed (longtable) in table 47.1689 on input line 70. Package longtable Warning: Column widths have changed (longtable) in table 47.1690 on input line 102. ) [3255] [3256] Chapter 48. (./structmom__variables_1_1accel__diag__ptrs.tex [3257 <./structmom__variables_ 1_1accel__diag__ptrs__coll__graph.pdf>]) (./structcoord__adapt_1_1adapt__cs.tex [3258] [3259 <./structcoord__adapt_1_1adapt__cs__coll__graph.pdf>]) (./structadvection__test__tracer_1_1advection__test__tracer__cs.tex [3260 <./st ructadvection__test__tracer_1_1advection__test__tracer__cs__coll__graph.pdf>]) (./structmom__ale_1_1ale__cs.tex [3261] [3262 <./structmom__ale_1_1ale__cs__col l__graph.pdf>]) (./structmom__ale__sponge_1_1ale__sponge__cs.tex [3263] [3264 <./structmom__ale__sponge_1_1ale__sponge__cs__coll__graph.pdf>] [3265]) (./interfacemom__forcing__type_1_1allocate__forcing__type.tex [3266] Package longtable Warning: Column widths have changed (longtable) in table 48.1 on input line 59. [3267] Package longtable Warning: Column widths have changed (longtable) in table 48.2 on input line 148. [3268]) (./interfacemom__forcing__type_1_1allocate__mech__forcing.tex [3269] Package longtable Warning: Column widths have changed (longtable) in table 48.3 on input line 53. [3270] Package longtable Warning: Column widths have changed (longtable) in table 48.4 on input line 112. ) (./interfacemom__array__transform_1_1allocate__rotated__array.tex [3271] Package longtable Warning: Column widths have changed (longtable) in table 48.5 on input line 51. Overfull \vbox (25.74976pt too high) has occurred while \output is active [3272] Package longtable Warning: Column widths have changed (longtable) in table 48.6 on input line 93. [3273] Package longtable Warning: Column widths have changed (longtable) in table 48.7 on input line 136. Package longtable Warning: Column widths have changed (longtable) in table 48.8 on input line 179. Overfull \vbox (6.44917pt too high) has occurred while \output is active [3274]) (./interfacemom__hor__index_1_1assignment_07_0A_08.tex [3275] Package longtable Warning: Column widths have changed (longtable) in table 48.9 on input line 41. ) (./interfacemom__coms_1_1assignment_07_0A_08.tex [3276] Package longtable Warning: Column widths have changed (longtable) in table 48.10 on input line 41. ) (./structmom__tidal__forcing_1_1astro__longitudes.tex [3277]) (./structmom__diag__mediator_1_1axes__grp.tex [3278 <./structmom__tidal__forcin g_1_1astro__longitudes__coll__graph.pdf>] [3279 <./structmom__diag__mediator_1_ 1axes__grp__coll__graph.pdf>] [3280]) (./structmom__barotropic_1_1barotropic__cs.tex Underfull \vbox (badness 10000) has occurred while \output is active [3281] [3282 <./structmom__barotropic_1_1barotropic__cs__coll__graph.pdf>] [3283] [3284] [3285] [3286] [3287] [3288]) (./interfacemom__checksums_1_1bchksum.tex [3289] Package longtable Warning: Column widths have changed (longtable) in table 48.11 on input line 55. [3290] Underfull \vbox (badness 10000) has occurred while \output is active [3291] [3292] Package longtable Warning: Column widths have changed (longtable) in table 48.12 on input line 253. [3293] Underfull \vbox (badness 10000) has occurred while \output is active [3294]) (./interfacemom__checksums_1_1bchksum__pair.tex [3295] Package longtable Warning: Column widths have changed (longtable) in table 48.13 on input line 59. [3296] Package longtable Warning: Column widths have changed (longtable) in table 48.14 on input line 154. [3297]) (./structbfb__surface__forcing_1_1bfb__surface__forcing__cs.tex [3298] [3299 <./structbfb__surface__forcing_1_1bfb__surface__forcing__cs__coll_ _graph.pdf>]) (./structmom__bkgnd__mixing_1_1bkgnd__mixing__cs.tex [3300 <./str uctmom__bkgnd__mixing_1_1bkgnd__mixing__cs__coll__graph.pdf>] [3301]) (./structboundary__impulse__tracer_1_1boundary__impulse__tracer__cs.tex [3302] [3303 <./structboundary__impulse__tracer_1_1boundary__impulse__tracer__c s__coll__graph.pdf>]) (./structmom__variables_1_1bt__cont__type.tex [3304] [3305 <./structmom__variables_1_1bt__cont__type__coll__graph.pdf>]) (./structmom__barotropic_1_1bt__obc__type.tex [3306] [3307 <./structmom__barotr opic_1_1bt__obc__type__coll__graph.pdf>]) (./structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs.tex [3308] [3309 <./stru ctmom__bulk__mixed__layer_1_1bulkmixedlayer__cs__coll__graph.pdf>] [3310] [3311]) (./interfacemom__eos_1_1calculate__compress.tex [3312] Package longtable Warning: Column widths have changed (longtable) in table 48.15 on input line 55. Underfull \vbox (badness 10000) has occurred while \output is active [3313] Package longtable Warning: Column widths have changed (longtable) in table 48.16 on input line 131. [3314]) (./interfacemom__eos_1_1calculate__density.tex [3315] Package longtable Warning: Column widths have changed (longtable) in table 48.17 on input line 63. Overfull \vbox (80.42377pt too high) has occurred while \output is active [3316] [3317] Package longtable Warning: Column widths have changed (longtable) in table 48.18 on input line 151. [3318] Package longtable Warning: Column widths have changed (longtable) in table 48.19 on input line 222. [3319] Package longtable Warning: Column widths have changed (longtable) in table 48.20 on input line 302. [3320] [3321] [3322] Package longtable Warning: Column widths have changed (longtable) in table 48.21 on input line 413. [3323] Package longtable Warning: Column widths have changed (longtable) in table 48.22 on input line 504. [3324]) (./interfacemom__eos_1_1calculate__density__derivs.tex [3325] Package longtable Warning: Column widths have changed (longtable) in table 48.23 on input line 57. [3326] Package longtable Warning: Column widths have changed (longtable) in table 48.24 on input line 139. [3327] Package longtable Warning: Column widths have changed (longtable) in table 48.25 on input line 214. Overfull \vbox (39.68802pt too high) has occurred while \output is active [3328]) (./interfacemom__eos__linear_1_1calculate__density__derivs__linear.tex [3329] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]linear Package longtable Warning: Column widths have changed (longtable) in table 48.26 on input line 59. [3330] Underfull \hbox (badness 10000) in paragraph at lines 94--95 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]linear Package longtable Warning: Column widths have changed (longtable) in table 48.27 on input line 118. [3331]) (./interfacemom__eos__nemo_1_1calculate__density__derivs__nemo.tex [3332] Package longtable Warning: Column widths have changed (longtable) in table 48.28 on input line 53. [3333] Package longtable Warning: Column widths have changed (longtable) in table 48.29 on input line 153. ) (./interfacemom__eos__teos10_1_1calculate__density__derivs__teos10.tex [3334] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]teos10 [3335] Package longtable Warning: Column widths have changed (longtable) in table 48.30 on input line 53. Underfull \hbox (badness 10000) in paragraph at lines 92--93 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]teos10 [3336] Package longtable Warning: Column widths have changed (longtable) in table 48.31 on input line 110. ) (./interfacemom__eos__wright_1_1calculate__density__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]wright [3337] Package longtable Warning: Column widths have changed (longtable) in table 48.32 on input line 53. [3338] Underfull \hbox (badness 10000) in paragraph at lines 95--96 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]wright Package longtable Warning: Column widths have changed (longtable) in table 48.33 on input line 113. [3339]) (./interfacemom__eos__linear_1_1calculate__density__linear.tex [3340] Package longtable Warning: Column widths have changed (longtable) in table 48.34 on input line 59. [3341] Package longtable Warning: Column widths have changed (longtable) in table 48.35 on input line 116. ) (./interfacemom__eos__nemo_1_1calculate__density__nemo.tex [3342] Package longtable Warning: Column widths have changed (longtable) in table 48.36 on input line 53. [3343] Package longtable Warning: Column widths have changed (longtable) in table 48.37 on input line 140. Overfull \vbox (10.06525pt too high) has occurred while \output is active [3344]) (./interfacemom__eos_1_1calculate__density__second__derivs.tex [3345] Package longtable Warning: Column widths have changed (longtable) in table 48.38 on input line 63. [3346] [3347] Package longtable Warning: Column widths have changed (longtable) in table 48.39 on input line 185. [3348]) (./interfacemom__eos__linear_1_1calculate__density__second__derivs__linear.tex [3349] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] Package longtable Warning: Column widths have changed (longtable) in table 48.40 on input line 59. [3350] Underfull \hbox (badness 10000) in paragraph at lines 96--97 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] Package longtable Warning: Column widths have changed (longtable) in table 48.41 on input line 120. [3351]) (./interfacemom__eos__teos10_1_1calculate__density__second__derivs__teos10.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [3352] Package longtable Warning: Column widths have changed (longtable) in table 48.42 on input line 59. [3353] Underfull \hbox (badness 10000) in paragraph at lines 101--102 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] Package longtable Warning: Column widths have changed (longtable) in table 48.43 on input line 125. [3354]) (./interfacemom__eos__wright_1_1calculate__density__second__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [3355] Package longtable Warning: Column widths have changed (longtable) in table 48.44 on input line 59. [3356] Underfull \hbox (badness 10000) in paragraph at lines 120--121 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] Package longtable Warning: Column widths have changed (longtable) in table 48.45 on input line 144. [3357]) (./interfacemom__eos__teos10_1_1calculate__density__teos10.tex [3358] Package longtable Warning: Column widths have changed (longtable) in table 48.46 on input line 53. [3359] Package longtable Warning: Column widths have changed (longtable) in table 48.47 on input line 108. ) (./interfacemom__eos__unesco_1_1calculate__density__unesco.tex [3360] Package longtable Warning: Column widths have changed (longtable) in table 48.48 on input line 53. [3361] Package longtable Warning: Column widths have changed (longtable) in table 48.49 on input line 131. Overfull \vbox (42.16423pt too high) has occurred while \output is active [3362]) (./interfacemom__eos__wright_1_1calculate__density__wright.tex [3363] Package longtable Warning: Column widths have changed (longtable) in table 48.50 on input line 53. [3364] Package longtable Warning: Column widths have changed (longtable) in table 48.51 on input line 115. ) (./interfacemom__eos_1_1calculate__spec__vol.tex [3365] [3366] Package longtable Warning: Column widths have changed (longtable) in table 48.52 on input line 57. [3367] Package longtable Warning: Column widths have changed (longtable) in table 48.53 on input line 143. [3368] Package longtable Warning: Column widths have changed (longtable) in table 48.54 on input line 215. [3369]) (./interfacemom__eos__linear_1_1calculate__spec__vol__linear.tex [3370] Package longtable Warning: Column widths have changed (longtable) in table 48.55 on input line 59. [3371] Package longtable Warning: Column widths have changed (longtable) in table 48.56 on input line 117. ) (./interfacemom__eos__teos10_1_1calculate__spec__vol__teos10.tex [3372] [3373] Package longtable Warning: Column widths have changed (longtable) in table 48.57 on input line 53. [3374] Package longtable Warning: Column widths have changed (longtable) in table 48.58 on input line 110. ) (./interfacemom__eos__unesco_1_1calculate__spec__vol__unesco.tex [3375] Package longtable Warning: Column widths have changed (longtable) in table 48.59 on input line 53. [3376] Package longtable Warning: Column widths have changed (longtable) in table 48.60 on input line 131. Underfull \vbox (badness 10000) has occurred while \output is active [3377]) (./interfacemom__eos__wright_1_1calculate__spec__vol__wright.tex [3378] Package longtable Warning: Column widths have changed (longtable) in table 48.61 on input line 53. [3379] Package longtable Warning: Column widths have changed (longtable) in table 48.62 on input line 107. ) (./interfacemom__eos_1_1calculate__specific__vol__derivs.tex [3380] Package longtable Warning: Column widths have changed (longtable) in table 48.63 on input line 55. Underfull \vbox (badness 10000) has occurred while \output is active [3381] [3382] Package longtable Warning: Column widths have changed (longtable) in table 48.64 on input line 136. ) (./interfacemom__eos_1_1calculate__tfreeze.tex [3383] Package longtable Warning: Column widths have changed (longtable) in table 48.65 on input line 53. Overfull \vbox (50.59338pt too high) has occurred while \output is active [3384] Package longtable Warning: Column widths have changed (longtable) in table 48.66 on input line 129. Overfull \vbox (45.06868pt too high) has occurred while \output is active [3385]) (./interfacemom__tfreeze_1_1calculate__tfreeze__linear.tex [3386] Package longtable Warning: Column widths have changed (longtable) in table 48.67 on input line 55. [3387] Package longtable Warning: Column widths have changed (longtable) in table 48.68 on input line 103. ) (./interfacemom__tfreeze_1_1calculate__tfreeze__millero.tex [3388] [3389] Package longtable Warning: Column widths have changed (longtable) in table 48.69 on input line 49. Package longtable Warning: Column widths have changed (longtable) in table 48.70 on input line 91. [3390]) (./interfacemom__tfreeze_1_1calculate__tfreeze__teos10.tex [3391] Package longtable Warning: Column widths have changed (longtable) in table 48.71 on input line 49. Package longtable Warning: Column widths have changed (longtable) in table 48.72 on input line 97. [3392]) (./interfacemom__debugging_1_1check__redundant.tex [3393] [3394] Package longtable Warning: Column widths have changed (longtable) in table 48.73 on input line 57. [3395] Package longtable Warning: Column widths have changed (longtable) in table 48.74 on input line 166. [3396]) (./interfacemom__debugging_1_1check__redundant__b.tex [3397] Package longtable Warning: Column widths have changed (longtable) in table 48.75 on input line 57. [3398] Package longtable Warning: Column widths have changed (longtable) in table 48.76 on input line 145. [3399] Package longtable Warning: Column widths have changed (longtable) in table 48.77 on input line 204. [3400] [3401] Package longtable Warning: Column widths have changed (longtable) in table 48.78 on input line 314. ) (./interfacemom__debugging_1_1check__redundant__c.tex [3402] Package longtable Warning: Column widths have changed (longtable) in table 48.79 on input line 57. Overfull \vbox (103.58171pt too high) has occurred while \output is active [3403] [3404] Package longtable Warning: Column widths have changed (longtable) in table 48.80 on input line 166. ) (./interfacemom__debugging_1_1check__redundant__t.tex [3405] [3406] Package longtable Warning: Column widths have changed (longtable) in table 48.81 on input line 57. [3407] Package longtable Warning: Column widths have changed (longtable) in table 48.82 on input line 131. [3408] Package longtable Warning: Column widths have changed (longtable) in table 48.83 on input line 189. [3409] Package longtable Warning: Column widths have changed (longtable) in table 48.84 on input line 286. [3410]) (./interfacemom__checksums_1_1chk__sum__msg.tex [3411] Package longtable Warning: Column widths have changed (longtable) in table 48.85 on input line 51. Package longtable Warning: Column widths have changed (longtable) in table 48.86 on input line 88. [3412] Package longtable Warning: Column widths have changed (longtable) in table 48.87 on input line 128. [3413] Package longtable Warning: Column widths have changed (longtable) in table 48.88 on input line 176. ) (./interfacemom__checksums_1_1chksum.tex [3414] Package longtable Warning: Column widths have changed (longtable) in table 48.89 on input line 51. [3415] Package longtable Warning: Column widths have changed (longtable) in table 48.90 on input line 126. [3416] Package longtable Warning: Column widths have changed (longtable) in table 48.91 on input line 174. ) (./interfacemom__domains_1_1clone__mom__domain.tex [3417] [3418] Package longtable Warning: Column widths have changed (longtable) in table 48.92 on input line 53. [3419] Package longtable Warning: Column widths have changed (longtable) in table 48.93 on input line 159. [3420] Underfull \vbox (badness 10000) has occurred while \output is active [3421]) (./structmom__variables_1_1cont__diag__ptrs.tex Underfull \vbox (badness 1902) has occurred while \output is active [3422]) (./structmom__continuity_1_1continuity__cs.tex [3423 <./structmom__variables_1_ 1cont__diag__ptrs__coll__graph.pdf>] [3424 <./structmom__continuity_1_1continui ty__cs__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1continuity__ppm__cs.tex [3425 <./structmom__co ntinuity__ppm_1_1continuity__ppm__cs__coll__graph.pdf>]) (./interfaceregrid__consts_1_1coordinateunits.tex [3426] Underfull \hbox (badness 10000) detected at line 37 [][][] Package longtable Warning: Column widths have changed (longtable) in table 48.94 on input line 44. [3427] Underfull \hbox (badness 10000) detected at line 76 [][][] Package longtable Warning: Column widths have changed (longtable) in table 48.95 on input line 83. ) (./structmom__coriolisadv_1_1coriolisadv__cs.tex [3428] [3429 <./structmom__c oriolisadv_1_1coriolisadv__cs__coll__graph.pdf>] [3430]) (./interfacemom__domains_1_1create__group__pass.tex [3431] [3432] Package longtable Warning: Column widths have changed (longtable) in table 48.96 on input line 57. [3433] Package longtable Warning: Column widths have changed (longtable) in table 48.97 on input line 131. [3434] Package longtable Warning: Column widths have changed (longtable) in table 48.98 on input line 207. [3435] [3436] Package longtable Warning: Column widths have changed (longtable) in table 48.99 on input line 294. [3437]) (./structmom__controlled__forcing_1_1ctrl__forcing__cs.tex [3438 <./str uctmom__controlled__forcing_1_1ctrl__forcing__cs__coll__graph.pdf>] [3439] [3440] [3441]) (./structmom__cvmix__conv_1_1cvmix__conv__cs.tex [3442 <./struct mom__cvmix__conv_1_1cvmix__conv__cs__coll__graph.pdf>]) (./structmom__cvmix__ddiff_1_1cvmix__ddiff__cs.tex [3443] [3444 <./structmom__c vmix__ddiff_1_1cvmix__ddiff__cs__coll__graph.pdf>]) (./structmom__cvmix__shear_1_1cvmix__shear__cs.tex [3445 <./structmom__cvmix__s hear_1_1cvmix__shear__cs__coll__graph.pdf>]) (./structmom__sum__output_1_1depth__list.tex [3446] [3447 <./structmom__sum__ou tput_1_1depth__list__coll__graph.pdf>]) (./structmom__diabatic__aux_1_1diabatic__aux__cs.tex [3448 <./structmom__diabat ic__aux_1_1diabatic__aux__cs__coll__graph.pdf>]) (./structmom__diabatic__driver_1_1diabatic__cs.tex [3449] Underfull \vbox (badness 10000) has occurred while \output is active [3450] [3451 <./structmom__diabatic__driver_1_1diabatic__cs__coll__graph.pdf>] [3452] [3453] [3454] [3455] [3456]) (./structmom__diag__mediator_1_1diag__ctrl.tex [3457] [3458 <./structmom__diag_ _mediator_1_1diag__ctrl__coll__graph.pdf>] [3459] [3460] [3461]) (./structmom__diag__mediator_1_1diag__dsamp.tex) (./structmom__diag__mediator_1_1diag__grid__storage.tex [3462 <./structmom__dia g__mediator_1_1diag__dsamp__coll__graph.pdf>] [3463 <./structmom__diag__mediato r_1_1diag__grid__storage__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__grids__type.tex) (./structmom__diag__remap_1_1diag__remap__ctrl.tex [3464 <./structmom__diag__me diator_1_1diag__grids__type__coll__graph.pdf>] [3465 <./structmom__diag__remap_ 1_1diag__remap__ctrl__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__type.tex [3466] [3467 <./structmom__diag_ _mediator_1_1diag__type__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diagcs__dsamp.tex [3468] [3469 <./structmom__di ag__mediator_1_1diagcs__dsamp__coll__graph.pdf>] [3470]) (./structmom__diagnostics_1_1diagnostics__cs.tex [3471] [3472 <./structmom__dia gnostics_1_1diagnostics__cs__coll__graph.pdf>] [3473] [3474] [3475]) (./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs.tex [3476] [3477 <./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs__coll__graph .pdf>]) (./structmom__set__diffusivity_1_1diffusivity__diags.tex [3478] [3479 <./structmom__set__diffusivity_1_1diffusivity__diags__coll__graph.pdf>]) (./structmom__get__input_1_1directories.tex [3480 <./structmom__get__input_1_1d irectories__coll__graph.pdf>]) (./interfacemom__document_1_1doc__param.tex [3481] Package longtable Warning: Column widths have changed (longtable) in table 48.100 on input line 71. [3482] Package longtable Warning: Column widths have changed (longtable) in table 48.101 on input line 143. Underfull \vbox (badness 10000) has occurred while \output is active [3483] Package longtable Warning: Column widths have changed (longtable) in table 48.102 on input line 215. [3484] [3485] Package longtable Warning: Column widths have changed (longtable) in table 48.103 on input line 294. [3486] Package longtable Warning: Column widths have changed (longtable) in table 48.104 on input line 372. [3487] Package longtable Warning: Column widths have changed (longtable) in table 48.105 on input line 448. [3488] Package longtable Warning: Column widths have changed (longtable) in table 48.106 on input line 504. [3489] Package longtable Warning: Column widths have changed (longtable) in table 48.107 on input line 572. [3490] Package longtable Warning: Column widths have changed (longtable) in table 48.108 on input line 644. [3491]) (./structmom__document_1_1doc__type.tex [3492 <./structmom__document_1_ 1doc__type__coll__graph.pdf>]) (./structdome__tracer_1_1dome__tracer__cs.tex [3493] [3494 <./structdome__tracer_1_1dome__tracer__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1downsample__diag__field.tex [3495] Package longtable Warning: Column widths have changed (longtable) in table 48.109 on input line 59. [3496] Package longtable Warning: Column widths have changed (longtable) in table 48.110 on input line 134. [3497]) (./interfacemom__diag__mediator_1_1downsample__field.tex [3498] Package longtable Warning: Column widths have changed (longtable) in table 48.111 on input line 65. Underfull \vbox (badness 10000) has occurred while \output is active [3499] [3500] [3501]pdfTeX warning (ext4): destination with the same identifier (name{ namespacemom__diag__mediator_downsampling}) has been already used, duplicate ig nored \relax l.229 ...espacemom__diag__mediator_downsampling}{} \subsection{The down sampl... Package longtable Warning: Column widths have changed (longtable) in table 48.112 on input line 282. [3502] Overfull \hbox (36.1684pt too wide) in paragraph at lines 318--318 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [3503] Underfull \vbox (badness 10000) has occurred while \output is active [3504]) (./interfacemom__diag__mediator_1_1downsample__mask.tex [3505] Package longtable Warning: Column widths have changed (longtable) in table 48.113 on input line 65. [3506] Package longtable Warning: Column widths have changed (longtable) in table 48.114 on input line 139. [3507]) (./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs.tex Underfull \vbox (badness 3590) has occurred while \output is active [3508] [3509 <./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs__co ll__graph.pdf>]) (./structregional__dyes_1_1dye__tracer__cs.tex [3510 <./struct regional__dyes_1_1dye__tracer__cs__coll__graph.pdf>]) (./structdyed__channel__initialization_1_1dyed__channel__obc__cs.tex [3511]) (./structdyed__obc__tracer_1_1dyed__obc__tracer__cs.tex [3512 <./structdyed__ch annel__initialization_1_1dyed__channel__obc__cs__coll__graph.pdf>] [3513 <./str uctdyed__obc__tracer_1_1dyed__obc__tracer__cs__coll__graph.pdf>]) (./structmom__dyn__horgrid_1_1dyn__horgrid__type.tex [3514 <./structmom__dyn__h orgrid_1_1dyn__horgrid__type__coll__graph.pdf>] [3515] [3516] [3517] [3518]) (./interfacemom__coms_1_1efp__sum__across__pes.tex [3519] Package longtable Warning: Column widths have changed (longtable) in table 48.115 on input line 45. [3520] Package longtable Warning: Column widths have changed (longtable) in table 48.116 on input line 115. [3521]) (./structmom__coms_1_1efp__type.tex) (./structmom__energetic__pbl_1_1energetic__pbl__cs.tex [3522 <./structmom__coms _1_1efp__type__coll__graph.pdf>] [3523 <./structmom__energetic__pbl_1_1energeti c__pbl__cs__coll__graph.pdf>] [3524] [3525] [3526]) (./structmom__entrain__diffusive_1_1entrain__diffusive__cs.tex [3527 <./structm om__entrain__diffusive_1_1entrain__diffusive__cs__coll__graph.pdf>]) (./structmom__eos_1_1eos__type.tex [3528] [3529 <./structmom__eos_1_1eos__type_ _coll__graph.pdf>]) (./structmom__energetic__pbl_1_1epbl__column__diags.tex [3530 <./structmom__energetic__pbl_1_1epbl__column__diags__coll__graph.pdf>]) (./structmom__restart_1_1field__restart.tex [3531]) (./structmom__file__parser_1_1file__data__type.tex [3532 <./structmom__restart_ 1_1field__restart__coll__graph.pdf>]) (./interfacemom__io_1_1file__exists.tex [3533 <./structmom__file__parser_1_1file__data__type__coll__graph.pdf>] Package longtable Warning: Column widths have changed (longtable) in table 48.117 on input line 45. [3534] Package longtable Warning: Column widths have changed (longtable) in table 48.118 on input line 79. ) (./structmom__open__boundary_1_1file__obc__cs.tex [3535]) (./interfacemom__horizontal__regridding_1_1fill__boundaries.tex [3536 <./struct mom__open__boundary_1_1file__obc__cs__coll__graph.pdf>] Package longtable Warning: Column widths have changed (longtable) in table 48.119 on input line 45. Underfull \hbox (badness 10000) in paragraph at lines 71--72 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [3537] Package longtable Warning: Column widths have changed (longtable) in table 48.120 on input line 85. ) (./interfacemom__domains_1_1fill__symmetric__edges.tex [3538] Package longtable Warning: Column widths have changed (longtable) in table 48.121 on input line 49. [3539] Underfull \vbox (badness 10000) has occurred while \output is active [3540]) (./interfacemom__interface__heights_1_1find__eta.tex [3541] Package longtable Warning: Column widths have changed (longtable) in table 48.122 on input line 57. [3542] [3543] Package longtable Warning: Column widths have changed (longtable) in table 48.123 on input line 191. [3544]) (./structmom__forcing__type_1_1forcing.tex [3545] [3546 <./structmom__f orcing__type_1_1forcing__coll__graph.pdf>] [3547] [3548]) (./structmom__forcing__type_1_1forcing__diags.tex [3549] [3550 <./structmom__fo rcing__type_1_1forcing__diags__coll__graph.pdf>] [3551] [3552] [3553] [3554]) (./structocean__da__types__mod_1_1forward__operator__type.tex [3555]) (./structg__tracer__utils_1_1g__diag__type.tex [3556 <./structocean__da__types_ _mod_1_1forward__operator__type__coll__graph.pdf>]) (./structg__tracer__utils_1_1g__tracer__common.tex [3557 <./structg__tracer__ut ils_1_1g__diag__type__coll__graph.pdf>] [3558 <./structg__tracer__utils_1_1g__t racer__common__coll__graph.pdf>]) (./interfaceg__tracer__utils_1_1g__tracer__get__pointer.tex [3559] Package longtable Warning: Column widths have changed (longtable) in table 48.124 on input line 53. Package longtable Warning: Column widths have changed (longtable) in table 48.125 on input line 85. [3560] [3561] Package longtable Warning: Column widths have changed (longtable) in table 48.126 on input line 117. ) (./interfaceg__tracer__utils_1_1g__tracer__get__values.tex [3562] Package longtable Warning: Column widths have changed (longtable) in table 48.127 on input line 61. [3563] Package longtable Warning: Column widths have changed (longtable) in table 48.128 on input line 103. Package longtable Warning: Column widths have changed (longtable) in table 48.129 on input line 145. Overfull \vbox (58.06468pt too high) has occurred while \output is active [3564] Package longtable Warning: Column widths have changed (longtable) in table 48.130 on input line 179. [3565] Package longtable Warning: Column widths have changed (longtable) in table 48.131 on input line 211. ) (./interfaceg__tracer__utils_1_1g__tracer__set__values.tex [3566] Package longtable Warning: Column widths have changed (longtable) in table 48.132 on input line 61. [3567] Package longtable Warning: Column widths have changed (longtable) in table 48.133 on input line 102. Package longtable Warning: Column widths have changed (longtable) in table 48.134 on input line 141. [3568] Package longtable Warning: Column widths have changed (longtable) in table 48.135 on input line 175. ) (./structg__tracer__utils_1_1g__tracer__type.tex [3569 <./structg__tracer__ut ils_1_1g__tracer__type__coll__graph.pdf>]) (./structmom__geothermal_1_1geothermal__cs.tex [3570]) (./interfacemom__file__parser_1_1get__param.tex [3571 <./structmom__geothermal_ 1_1geothermal__cs__coll__graph.pdf>] [3572] Package longtable Warning: Column widths have changed (longtable) in table 48.136 on input line 77. [3573] Package longtable Warning: Column widths have changed (longtable) in table 48.137 on input line 159. [3574] [3575] Package longtable Warning: Column widths have changed (longtable) in table 48.138 on input line 252. [3576] Package longtable Warning: Column widths have changed (longtable) in table 48.139 on input line 338. [3577] [3578] Package longtable Warning: Column widths have changed (longtable) in table 48.140 on input line 424. [3579] Package longtable Warning: Column widths have changed (longtable) in table 48.141 on input line 512. [3580] [3581] Package longtable Warning: Column widths have changed (longtable) in table 48.142 on input line 605. [3582] [3583] Package longtable Warning: Column widths have changed (longtable) in table 48.143 on input line 700. [3584]) (./structmom__grid__initialize_1_1gps.tex [3585 <./structmom__grid__ini tialize_1_1gps__coll__graph.pdf>]) (./structocean__da__types__mod_1_1grid__type.tex [3586] [3587 <./structocean__d a__types__mod_1_1grid__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1hchksum.tex [3588] Package longtable Warning: Column widths have changed (longtable) in table 48.144 on input line 53. [3589] Underfull \vbox (badness 10000) has occurred while \output is active [3590] Package longtable Warning: Column widths have changed (longtable) in table 48.145 on input line 229. [3591] Underfull \vbox (badness 10000) has occurred while \output is active [3592]) (./interfacemom__checksums_1_1hchksum__pair.tex [3593] Package longtable Warning: Column widths have changed (longtable) in table 48.146 on input line 57. [3594] [3595] Package longtable Warning: Column widths have changed (longtable) in table 48.147 on input line 141. ) (./structmom__hor__index_1_1hor__index__type.tex [3596] [3597 <./structmom__h or__index_1_1hor__index__type__coll__graph.pdf>] [3598]) (./structmom__hor__visc_1_1hor__visc__cs.tex [3599 <./structmom__hor__visc_1_1h or__visc__cs__coll__graph.pdf>] [3600] [3601] [3602] [3603]) (./interfacemom__horizontal__regridding_1_1horiz__interp__and__extrap__tracer.t ex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [3604] Package longtable Warning: Column widths have changed (longtable) in table 48.148 on input line 69. [3605] Underfull \vbox (badness 10000) has occurred while \output is active [3606] Underfull \vbox (badness 10000) has occurred while \output is active [3607] Underfull \vbox (badness 10000) has occurred while \output is active [3608] Underfull \hbox (badness 10000) in paragraph at lines 371--372 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [3609] Package longtable Warning: Column widths have changed (longtable) in table 48.149 on input line 411. [3610] Underfull \vbox (badness 10000) has occurred while \output is active [3611] Underfull \vbox (badness 10000) has occurred while \output is active [3612] Underfull \vbox (badness 10000) has occurred while \output is active [3613] Underfull \vbox (badness 10000) has occurred while \output is active [3614]) (./structcoord__hycom_1_1hycom__cs.tex [3615 <./structcoord__hycom_1_1hycom__cs __coll__graph.pdf>]) (./structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type.tex [3616 <. /structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type__coll__graph.p df>] [3617]) (./structmom__ice__shelf_1_1ice__shelf__cs.tex Underfull \vbox (badness 1028) has occurred while \output is active [3618] [3619 <./structmom__ice__shelf_1_1ice__shelf__cs__coll__graph.pdf>] [3620] [3621] [3622]) (./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs.tex [3623] [3624 <./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs__coll__g raph.pdf>] [3625] [3626]) (./structmom__ice__shelf__state_1_1ice__shelf__state.tex [3627] [3628 <./struct mom__ice__shelf__state_1_1ice__shelf__state__coll__graph.pdf>]) (./structideal__age__example_1_1ideal__age__tracer__cs.tex [3629 <./structideal __age__example_1_1ideal__age__tracer__cs__coll__graph.pdf>]) (./structidealized__hurricane_1_1idealized__hurricane__cs.tex [3630] [3631 <./s tructidealized__hurricane_1_1idealized__hurricane__cs__coll__graph.pdf>]) (./interfacemom__ale__sponge_1_1initialize__ale__sponge.tex [3632] [3633] Package longtable Warning: Column widths have changed (longtable) in table 48.150 on input line 55. [3634] Underfull \vbox (badness 10000) has occurred while \output is active [3635] [3636] Package longtable Warning: Column widths have changed (longtable) in table 48.151 on input line 279. [3637] Underfull \vbox (badness 10000) has occurred while \output is active [3638]) (./structmom__internal__tides_1_1int__tide__cs.tex Underfull \vbox (badness 10000) has occurred while \output is active [3639] [3640 <./structmom__internal__tides_1_1int__tide__cs__coll__graph.pdf>] [3641] [3642]) (./structmom__int__tide__input_1_1int__tide__input__cs.tex [3643] [3644 <./structmom__int__tide__input_1_1int__tide__input__cs__coll__grap h.pdf>]) (./structmom__int__tide__input_1_1int__tide__input__type.tex [3645 <./ structmom__int__tide__input_1_1int__tide__input__type__coll__graph.pdf>]) (./structregrid__interp_1_1interp__cs__type.tex [3646 <./structregrid__interp_1 _1interp__cs__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1is__nan.tex [3647] Package longtable Warning: Column widths have changed (longtable) in table 48.152 on input line 45. Package longtable Warning: Column widths have changed (longtable) in table 48.153 on input line 81. [3648] Package longtable Warning: Column widths have changed (longtable) in table 48.154 on input line 122. [3649] Package longtable Warning: Column widths have changed (longtable) in table 48.155 on input line 157. ) (./structisomip__tracer_1_1isomip__tracer__cs.tex Underfull \vbox (badness 1688) has occurred while \output is active [3650] [3651 <./structisomip__tracer_1_1isomip__tracer__cs__coll__graph.pdf>]) (./structmom__kappa__shear_1_1kappa__shear__cs.tex [3652 <./structmom__kappa__s hear_1_1kappa__shear__cs__coll__graph.pdf>] [3653]) (./structkdtree_1_1kd__root.tex [3654]) (./structkelvin__initialization_1_1kelvin__obc__cs.tex [3655 <./structkdtree_1_ 1kd__root__coll__graph.pdf>]) (./structmom__cvmix__kpp_1_1kpp__cs.tex [3656 <./ structkelvin__initialization_1_1kelvin__obc__cs__coll__graph.pdf>] [3657 <./str uctmom__cvmix__kpp_1_1kpp__cs__coll__graph.pdf>] [3658] [3659] [3660] [3661]) (./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diffusion__cs. tex [3662 <./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diff usion__cs__coll__graph.pdf>] [3663]) (./structmom__document_1_1link__msg.tex [3664 <./structmom__document_1_1link__msg__coll__graph.pdf>]) (./structmom__file__parser_1_1link__parameter.tex [3665 <./structmom__file__par ser_1_1link__parameter__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__u__type.tex [3666 <./structmom__ba rotropic_1_1local__bt__cont__u__type__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__v__type.tex [3667] [3668 <./struct mom__barotropic_1_1local__bt__cont__v__type__coll__graph.pdf>]) (./interfacemom__file__parser_1_1log__param.tex Underfull \hbox (badness 2065) in paragraph at lines 23--24 []\T1/phv/m/n/10 subroutine [][]log[]_[]param[]_[]int[]_[]array[][] (CS, mod-u- le-name, var-name, value, desc, units, de-fault, layout[]Param, [3669] [3670] Package longtable Warning: Column widths have changed (longtable) in table 48.156 on input line 69. [3671] Package longtable Warning: Column widths have changed (longtable) in table 48.157 on input line 139. [3672] Package longtable Warning: Column widths have changed (longtable) in table 48.158 on input line 208. [3673] Package longtable Warning: Column widths have changed (longtable) in table 48.159 on input line 278. [3674] Package longtable Warning: Column widths have changed (longtable) in table 48.160 on input line 349. [3675] Package longtable Warning: Column widths have changed (longtable) in table 48.161 on input line 415. Underfull \vbox (badness 10000) has occurred while \output is active [3676] Package longtable Warning: Column widths have changed (longtable) in table 48.162 on input line 491. [3677] [3678]) (./interfacemom__file__parser_1_1log__version.tex [3679] Package longtable Warning: Column widths have changed (longtable) in table 48.163 on input line 55. [3680] Package longtable Warning: Column widths have changed (longtable) in table 48.164 on input line 104. ) (./structmom__ice__shelf__dynamics_1_1loop__bounds__type.tex [3681]) (./structmom__internal__tides_1_1loop__bounds__type.tex [3682 <./structmom__ice __shelf__dynamics_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1loop__bounds__type.tex [3683 <./structmom__int ernal__tides_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__marine__ice_1_1marine__ice__cs.tex [3684 <./structmom__continuity __ppm_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__forcing__type_1_1mech__forcing.tex [3685 <./structmom__marine__ic e_1_1marine__ice__cs__coll__graph.pdf>] [3686 <./structmom__forcing__type_1_1me ch__forcing__coll__graph.pdf>] [3687]) (./structmom__meke_1_1meke__cs.tex [3688 <./structmom__meke_1_1meke__cs__coll__graph.pdf>] [3689] [3690]) (./structmom__meke__types_1_1meke__type.tex [3691] [3692 <./structmom__meke__ty pes_1_1meke__type__coll__graph.pdf>]) (./structmom__barotropic_1_1memory__size__type.tex [3693]) (./structmeso__surface__forcing_1_1meso__surface__forcing__cs.tex [3694 <./stru ctmom__barotropic_1_1memory__size__type__coll__graph.pdf>] [3695 <./structmeso_ _surface__forcing_1_1meso__surface__forcing__cs__coll__graph.pdf>]) (./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs.tex [3696] [3697 <./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs__coll__gra ph.pdf>]) (./structmom_1_1mom__control__struct.tex [3698] Underfull \vbox (badness 10000) has occurred while \output is active [3699] [3700 <./structmom_1_1mom__control__struct__coll__graph.pdf>] [3701] [3702] [3703] [3704]) (./structmom_1_1mom__diag__ids.tex [3705]) (./structmom__domains_1_1mom__domain__type.tex [3706 <./structmom_1_1mom__diag_ _ids__coll__graph.pdf>] [3707 <./structmom__domains_1_1mom__domain__type__coll_ _graph.pdf>]) (./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs.tex [3708] [3709 <./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs__coll__gra ph.pdf>] [3710] [3711] [3712]) (./structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs.tex [3713] [3714 <./st ructmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs__coll__graph.pdf>] [3715]) (./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs.tex [3716] [3717 <./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs__coll_ _graph.pdf>] [3718]) (./structmom__generic__tracer_1_1mom__generic__tracer__cs.tex [3719]) (./interfacemom__io_1_1mom__read__data.tex [3720 <./structmom__generic__tracer_ 1_1mom__generic__tracer__cs__coll__graph.pdf>] [3721] Package longtable Warning: Column widths have changed (longtable) in table 48.165 on input line 53. Package longtable Warning: Column widths have changed (longtable) in table 48.166 on input line 100. [3722] Package longtable Warning: Column widths have changed (longtable) in table 48.167 on input line 155. [3723] Package longtable Warning: Column widths have changed (longtable) in table 48.168 on input line 210. [3724]) (./interfacemom__io_1_1mom__read__vector.tex [3725] Package longtable Warning: Column widths have changed (longtable) in table 48.169 on input line 59. [3726] Package longtable Warning: Column widths have changed (longtable) in table 48.170 on input line 137. [3727]) (./structmom__restart_1_1mom__restart__cs.tex Underfull \vbox (badness 2495) has occurred while \output is active [3728] [3729 <./structmom__restart_1_1mom__restart__cs__coll__graph.pdf>]) (./interfacemom__checksum__packages_1_1mom__state__chksum.tex [3730] Package longtable Warning: Column widths have changed (longtable) in table 48.171 on input line 57. [3731] Package longtable Warning: Column widths have changed (longtable) in table 48.172 on input line 129. Underfull \vbox (badness 10000) has occurred while \output is active [3732]) (./structmom__neutral__diffusion_1_1neutral__diffusion__cs.tex [3733] [3734 <./ structmom__neutral__diffusion_1_1neutral__diffusion__cs__coll__graph.pdf>] [3735] [3736]) (./structmom__open__boundary_1_1obc__registry__type.tex [3737 <. /structmom__open__boundary_1_1obc__registry__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__data__type.tex [3738 <./structmom __open__boundary_1_1obc__segment__data__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__tracer__type.tex [3739 <./structm om__open__boundary_1_1obc__segment__tracer__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__type.tex [3740] [3741 <./structmo m__open__boundary_1_1obc__segment__type__coll__graph.pdf>] [3742] [3743]) (./structmom__open__boundary_1_1obc__struct__type.tex [3744]) (./structmom__restart_1_1obsolete__restart.tex [3745 <./structmom__open__bounda ry_1_1obc__struct__type__coll__graph.pdf>]) (./structocean__da__types__mod_1_1ocean__control__struct.tex [3746 <./structmom __restart_1_1obsolete__restart__coll__graph.pdf>] [3747 <./structocean__da__typ es__mod_1_1ocean__control__struct__coll__graph.pdf>]) (./structmom__grid_1_1ocean__grid__type.tex [3748 <./structmom__grid_1_1ocean__ grid__type__coll__graph.pdf>] [3749] [3750] [3751] [3752]) (./structmom__variables_1_1ocean__internal__state.tex [3753] [3754 <./structmom __variables_1_1ocean__internal__state__coll__graph.pdf>]) (./interfaceocean__model__mod_1_1ocean__model__data__get.tex [3755] Package longtable Warning: Column widths have changed (longtable) in table 48.173 on input line 47. [3756] Package longtable Warning: Column widths have changed (longtable) in table 48.174 on input line 96. [3757]) (./structmom__open__boundary_1_1ocean__obc__type.tex Underfull \vbox (badness 3590) has occurred while \output is active [3758] [3759 <./structmom__open__boundary_1_1ocean__obc__type__coll__graph.pdf>] [3760] [3761]) (./structocean__da__types__mod_1_1ocean__profile__type.tex [3762] [3763 <./structocean__da__types__mod_1_1ocean__profile__type__coll__grap h.pdf>] [3764]) (./structocean__model__mod_1_1ocean__public__type.tex [3765 <./ structocean__model__mod_1_1ocean__public__type__coll__graph.pdf>]) (./structocean__model__mod_1_1ocean__state__type.tex [3766] Underfull \vbox (badness 10000) has occurred while \output is active [3767] [3768 <./structocean__model__mod_1_1ocean__state__type__coll__graph.pdf>] [3769]) (./structmom__ocmip2__cfc_1_1ocmip2__cfc__cs.tex [3770] [3771 <./struct mom__ocmip2__cfc_1_1ocmip2__cfc__cs__coll__graph.pdf>] [3772]) (./structmom__oda__driver__mod_1_1oda__cs.tex [3773] [3774 <./structmom__oda__d river__mod_1_1oda__cs__coll__graph.pdf>] [3775]) (./structmom__offline__main_1_1offline__transport__cs.tex [3776] [3777 <./struc tmom__offline__main_1_1offline__transport__cs__coll__graph.pdf>] [3778] [3779] [3780] [3781]) (./structoil__tracer_1_1oil__tracer__cs.tex [3782] [3783 <./structoil__tracer_1_1oil__tracer__cs__coll__graph.pdf>] [3784]) (./structmom__opacity_1_1opacity__cs.tex [3785 <./structmom__opacity_1_1opacity __cs__coll__graph.pdf>]) (./interfacemom__coms_1_1operator_07_09_08.tex [3786] Underfull \hbox (badness 10000) detected at line 35 [][][] Package longtable Warning: Column widths have changed (longtable) in table 48.175 on input line 44. ) (./interfacemom__coms_1_1operator_07-_08.tex [3787] Underfull \hbox (badness 10000) detected at line 35 [][][] Package longtable Warning: Column widths have changed (longtable) in table 48.176 on input line 44. ) (./structmom__opacity_1_1optics__type.tex [3788] [3789 <./structmom__opacity_ 1_1optics__type__coll__graph.pdf>]) (./structmom__restart_1_1p0d.tex) (./structmom__restart_1_1p1d.tex [3790 <./structmom__restart_1_1p0d__coll__grap h.pdf>]) (./structmom__ale__sponge_1_1p2d.tex [3791 <./structmom__restart_1_1p1 d__coll__graph.pdf>]) (./structmom__restart_1_1p2d.tex [3792 <./structmom__ale_ _sponge_1_1p2d__coll__graph.pdf>]) (./structmom__variables_1_1p2d.tex [3793 <./ structmom__restart_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_1p2d.tex [3794 <./structmom__variables_1_1p2d__coll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2d.tex [3795 <./structmom__sponge_1_1p2d__c oll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2di.tex [3796 <./structmo m__tracer__hor__diff_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_1p3d.tex [3797 <./structmom__tracer__hor__diff_1_1p2di__coll__graph.pdf>]) (./structmom__restart_1_1p3d.tex [3798 <./structmom__sponge_1_1p3d__coll__graph .pdf>]) (./structmom__ale__sponge_1_1p3d.tex [3799 <./structmom__restart_1_1p3d __coll__graph.pdf>]) (./structmom__variables_1_1p3d.tex [3800 <./structmom__ale __sponge_1_1p3d__coll__graph.pdf>]) (./structmom__restart_1_1p4d.tex [3801 <./s tructmom__variables_1_1p3d__coll__graph.pdf>]) (./structmom__file__parser_1_1param__file__type.tex [3802 <./structmom__restart _1_1p4d__coll__graph.pdf>] [3803 <./structmom__file__parser_1_1param__file__typ e__coll__graph.pdf>]) (./structmom__file__parser_1_1parameter__block.tex [3804]) (./interfacemom__domains_1_1pass__var.tex [3805 <./structmom__file__par ser_1_1parameter__block__coll__graph.pdf>] Package longtable Warning: Column widths have changed (longtable) in table 48.177 on input line 55. [3806] Underfull \vbox (badness 10000) has occurred while \output is active [3807] Package longtable Warning: Column widths have changed (longtable) in table 48.178 on input line 204. Overfull \vbox (17.1185pt too high) has occurred while \output is active [3808]) (./interfacemom__domains_1_1pass__var__complete.tex [3809] Package longtable Warning: Column widths have changed (longtable) in table 48.179 on input line 53. [3810] Package longtable Warning: Column widths have changed (longtable) in table 48.180 on input line 125. Overfull \vbox (9.01045pt too high) has occurred while \output is active [3811]) (./interfacemom__domains_1_1pass__var__start.tex [3812] Package longtable Warning: Column widths have changed (longtable) in table 48.181 on input line 53. Underfull \hbox (badness 10000) detected at line 54 [][][] [3813] Package longtable Warning: Column widths have changed (longtable) in table 48.182 on input line 130. [3814] Underfull \hbox (badness 10000) detected at line 131 [][][] ) (./interfacemom__domains_1_1pass__vector.tex [3815] [3816] Package longtable Warning: Column widths have changed (longtable) in table 48.183 on input line 55. [3817] Package longtable Warning: Column widths have changed (longtable) in table 48.184 on input line 143. [3818]) (./interfacemom__domains_1_1pass__vector__complete.tex [3819] Package longtable Warning: Column widths have changed (longtable) in table 48.185 on input line 55. [3820] [3821] Package longtable Warning: Column widths have changed (longtable) in table 48.186 on input line 139. [3822]) (./interfacemom__domains_1_1pass__vector__start.tex [3823] Package longtable Warning: Column widths have changed (longtable) in table 48.187 on input line 55. Underfull \hbox (badness 10000) detected at line 56 [][][] [3824] [3825] Package longtable Warning: Column widths have changed (longtable) in table 48.188 on input line 145. Underfull \hbox (badness 10000) detected at line 146 [][][] [3826]) (./structmom__pointaccel_1_1pointaccel__cs.tex [3827 <./structmom__poin taccel_1_1pointaccel__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1post__data.tex [3828] Package longtable Warning: Column widths have changed (longtable) in table 48.189 on input line 51. Overfull \vbox (38.17288pt too high) has occurred while \output is active [3829] Package longtable Warning: Column widths have changed (longtable) in table 48.190 on input line 115. [3830] [3831] Package longtable Warning: Column widths have changed (longtable) in table 48.191 on input line 195. Package longtable Warning: Column widths have changed (longtable) in table 48.192 on input line 249. Overfull \vbox (26.4347pt too high) has occurred while \output is active [3832] [3833]) (./structmom__pressureforce_1_1pressureforce__cs.tex [3834]) (./structmom__pressureforce__fv_1_1pressureforce__fv__cs.tex [3835 <./structmom __pressureforce_1_1pressureforce__cs__coll__graph.pdf>] [3836 <./structmom__pre ssureforce__fv_1_1pressureforce__fv__cs__coll__graph.pdf>]) (./structmom__pressureforce__mont_1_1pressureforce__mont__cs.tex [3837 <./struc tmom__pressureforce__mont_1_1pressureforce__mont__cs__coll__graph.pdf>]) (./structmom__random_1_1prng.tex [3838 <./structmom__random_1_1prng__coll__grap h.pdf>]) (./structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs.tex [3839 <. /structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs__coll__graph.pdf>]) (./structmom__oda__driver__mod_1_1ptr__mpp__domain.tex [3840]) (./interfacemom__checksums_1_1qchksum.tex [3841 <./structmom__oda__driver__mod_ 1_1ptr__mpp__domain__coll__graph.pdf>] Package longtable Warning: Column widths have changed (longtable) in table 48.193 on input line 55. [3842] Underfull \vbox (badness 10000) has occurred while \output is active [3843] [3844] Package longtable Warning: Column widths have changed (longtable) in table 48.194 on input line 253. [3845] Underfull \vbox (badness 10000) has occurred while \output is active [3846]) (./interfacemom__restart_1_1query__initialized.tex [3847] [3848] Package longtable Warning: Column widths have changed (longtable) in table 48.195 on input line 61. Package longtable Warning: Column widths have changed (longtable) in table 48.196 on input line 110. [3849] Package longtable Warning: Column widths have changed (longtable) in table 48.197 on input line 164. [3850] Package longtable Warning: Column widths have changed (longtable) in table 48.198 on input line 213. [3851] Package longtable Warning: Column widths have changed (longtable) in table 48.199 on input line 268. Package longtable Warning: Column widths have changed (longtable) in table 48.200 on input line 318. [3852] Package longtable Warning: Column widths have changed (longtable) in table 48.201 on input line 373. [3853] Package longtable Warning: Column widths have changed (longtable) in table 48.202 on input line 423. [3854] Package longtable Warning: Column widths have changed (longtable) in table 48.203 on input line 478. Package longtable Warning: Column widths have changed (longtable) in table 48.204 on input line 528. Overfull \vbox (1.00325pt too high) has occurred while \output is active [3855] Package longtable Warning: Column widths have changed (longtable) in table 48.205 on input line 583. [3856]) (./interfacemom__file__parser_1_1read__param.tex [3857] Package longtable Warning: Column widths have changed (longtable) in table 48.206 on input line 59. [3858] Package longtable Warning: Column widths have changed (longtable) in table 48.207 on input line 106. [3859] Package longtable Warning: Column widths have changed (longtable) in table 48.208 on input line 168. [3860] Package longtable Warning: Column widths have changed (longtable) in table 48.209 on input line 224. Package longtable Warning: Column widths have changed (longtable) in table 48.210 on input line 281. Overfull \vbox (16.03447pt too high) has occurred while \output is active [3861] Package longtable Warning: Column widths have changed (longtable) in table 48.211 on input line 330. [3862] Package longtable Warning: Column widths have changed (longtable) in table 48.212 on input line 392. [3863] Package longtable Warning: Column widths have changed (longtable) in table 48.213 on input line 458. [3864]) (./interfacemom__diag__manager__wrapper_1_1register__diag__field__fms.tex [3865] Underfull \hbox (badness 2626) in paragraph at lines 15--16 []\T1/phv/m/n/10 integer func-tion [][]register[]_[]diag[]_[]field[]_[]scalar[] _[]fms[][] (module[]_[]name, field[]_[]name, init[]_[]time, long[]_[]name, unit s, Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]array[]_[]fms [3866] Package longtable Warning: Column widths have changed (longtable) in table 48.214 on input line 73. Underfull \hbox (badness 10000) in paragraph at lines 116--117 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]scalar[]_[]fms [3867] Package longtable Warning: Column widths have changed (longtable) in table 48.215 on input line 156. [3868]) (./interfacemom__restart_1_1register__restart__field.tex [3869] Package longtable Warning: Column widths have changed (longtable) in table 48.216 on input line 69. [3870] Package longtable Warning: Column widths have changed (longtable) in table 48.217 on input line 126. [3871] Package longtable Warning: Column widths have changed (longtable) in table 48.218 on input line 188. [3872] Package longtable Warning: Column widths have changed (longtable) in table 48.219 on input line 251. [3873] Package longtable Warning: Column widths have changed (longtable) in table 48.220 on input line 312. [3874] Package longtable Warning: Column widths have changed (longtable) in table 48.221 on input line 363. [3875] Package longtable Warning: Column widths have changed (longtable) in table 48.222 on input line 418. Package longtable Warning: Column widths have changed (longtable) in table 48.223 on input line 473. Underfull \vbox (badness 10000) has occurred while \output is active [3876] Package longtable Warning: Column widths have changed (longtable) in table 48.224 on input line 529. [3877] Package longtable Warning: Column widths have changed (longtable) in table 48.225 on input line 585. [3878]) (./interfacemom__restart_1_1register__restart__pair.tex [3879] Package longtable Warning: Column widths have changed (longtable) in table 48.226 on input line 53. Package longtable Warning: Column widths have changed (longtable) in table 48.227 on input line 99. [3880] Package longtable Warning: Column widths have changed (longtable) in table 48.228 on input line 145. ) (./structmom__regridding_1_1regridding__cs.tex [3881] [3882 <./structmom__reg ridding_1_1regridding__cs__coll__graph.pdf>] [3883]) (./structmom__regularize__layers_1_1regularize__layers__cs.tex [3884 <./structm om__regularize__layers_1_1regularize__layers__cs__coll__graph.pdf>]) (./structmom__remapping_1_1remapping__cs.tex [3885] [3886 <./structmom__remappi ng_1_1remapping__cs__coll__graph.pdf>]) (./interfacemom__coms_1_1reproducing__sum.tex [3887] Package longtable Warning: Column widths have changed (longtable) in table 48.229 on input line 59. Underfull \hbox (badness 10000) detected at line 60 [][][] [3888] Underfull \vbox (badness 10000) has occurred while \output is active [3889] Package longtable Warning: Column widths have changed (longtable) in table 48.230 on input line 199. Underfull \hbox (badness 10000) detected at line 200 [][][] [3890] Underfull \vbox (badness 10000) has occurred while \output is active [3891] Underfull \vbox (badness 10000) has occurred while \output is active [3892]) (./interfacemom__coms_1_1reproducing__sum__efp.tex [3893] Package longtable Warning: Column widths have changed (longtable) in table 48.231 on input line 53. Underfull \hbox (badness 10000) detected at line 54 [][][] [3894] Underfull \vbox (badness 10000) has occurred while \output is active [3895]) (./structrgc__tracer_1_1rgc__tracer__cs.tex [3896 <./structrgc__tracer_1_1rgc__ tracer__cs__coll__graph.pdf>]) (./structcoord__rho_1_1rho__cs.tex [3897]) (./interfacemom__array__transform_1_1rotate__array.tex [3898 <./structcoord__rh o_1_1rho__cs__coll__graph.pdf>] Package longtable Warning: Column widths have changed (longtable) in table 48.232 on input line 51. [3899] Package longtable Warning: Column widths have changed (longtable) in table 48.233 on input line 97. [3900] Package longtable Warning: Column widths have changed (longtable) in table 48.234 on input line 143. Package longtable Warning: Column widths have changed (longtable) in table 48.235 on input line 189. Underfull \vbox (badness 10000) has occurred while \output is active [3901] Package longtable Warning: Column widths have changed (longtable) in table 48.236 on input line 224. ) (./interfacemom__array__transform_1_1rotate__array__pair.tex [3902] Package longtable Warning: Column widths have changed (longtable) in table 48.237 on input line 51. [3903] Package longtable Warning: Column widths have changed (longtable) in table 48.238 on input line 94. [3904] Package longtable Warning: Column widths have changed (longtable) in table 48.239 on input line 137. ) (./interfacemom__array__transform_1_1rotate__vector.tex [3905] Package longtable Warning: Column widths have changed (longtable) in table 48.240 on input line 51. [3906] Package longtable Warning: Column widths have changed (longtable) in table 48.241 on input line 94. Package longtable Warning: Column widths have changed (longtable) in table 48.242 on input line 135. Overfull \vbox (29.91698pt too high) has occurred while \output is active [3907]) (./interfacemom__transform__fms_1_1rotated__mpp__chksum.tex) (./interfacemom__transform__fms_1_1rotated__time__interp__external.tex [3908] Package longtable Warning: Column widths have changed (longtable) in table 48.243 on input line 53. Overfull \vbox (46.10497pt too high) has occurred while \output is active [3909]) (./interfacemom__transform__fms_1_1rotated__write__field.tex) (./interfacemom__safe__alloc_1_1safe__alloc__alloc.tex [3910] Package longtable Warning: Column widths have changed (longtable) in table 48.244 on input line 51. Overfull \vbox (22.88931pt too high) has occurred while \output is active [3911] Package longtable Warning: Column widths have changed (longtable) in table 48.245 on input line 92. [3912] Package longtable Warning: Column widths have changed (longtable) in table 48.246 on input line 136. ) (./interfacemom__safe__alloc_1_1safe__alloc__ptr.tex [3913] Package longtable Warning: Column widths have changed (longtable) in table 48.247 on input line 53. [3914] Package longtable Warning: Column widths have changed (longtable) in table 48.248 on input line 94. [3915] Package longtable Warning: Column widths have changed (longtable) in table 48.249 on input line 129. Package longtable Warning: Column widths have changed (longtable) in table 48.250 on input line 168. [3916] Package longtable Warning: Column widths have changed (longtable) in table 48.251 on input line 206. Package longtable Warning: Column widths have changed (longtable) in table 48.252 on input line 248. Overfull \vbox (27.44069pt too high) has occurred while \output is active [3917]) (./structscm__cvmix__tests_1_1scm__cvmix__tests__cs.tex [3918 <./struct scm__cvmix__tests_1_1scm__cvmix__tests__cs__coll__graph.pdf>]) (./structmom__open__boundary_1_1segment__tracer__registry__type.tex [3919]) (./structmom__set__diffusivity_1_1set__diffusivity__cs.tex [3920 <./structmom__ open__boundary_1_1segment__tracer__registry__type__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3921] [3922 <./structmom__set__diffusivity_1_1set__diffusivity__cs__coll__graph.pdf>] [3923] [3924] [3925]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__field.tex [3926] Package longtable Warning: Column widths have changed (longtable) in table 48.253 on input line 47. [3927] Package longtable Warning: Column widths have changed (longtable) in table 48.254 on input line 116. [3928]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__vel__field.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [3929] Package longtable Warning: Column widths have changed (longtable) in table 48.255 on input line 51. Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [3930] Package longtable Warning: Column widths have changed (longtable) in table 48.256 on input line 127. [3931]) (./structmom__set__visc_1_1set__visc__cs.tex [3932] [3933 <./structmom_ _set__visc_1_1set__visc__cs__coll__graph.pdf>] [3934]) (./structshelfwave__initialization_1_1shelfwave__obc__cs.tex [3935]) (./structcoord__sigma_1_1sigma__cs.tex [3936 <./structshelfwave__initialization _1_1shelfwave__obc__cs__coll__graph.pdf>]) (./structcoord__slight_1_1slight__cs.tex [3937 <./structcoord__sigma_1_1sigma__ cs__coll__graph.pdf>] [3938 <./structcoord__slight_1_1slight__cs__coll__graph.p df>]) (./structmom__sponge_1_1sponge__cs.tex [3939 <./structmom__sponge_1_1spon ge__cs__coll__graph.pdf>] [3940]) (./interfaceregrid__consts_1_1state__dependent.tex [3941] Package longtable Warning: Column widths have changed (longtable) in table 48.257 on input line 41. Package longtable Warning: Column widths have changed (longtable) in table 48.258 on input line 67. ) (./structmom__checksum__packages_1_1stats.tex [3942]) (./structmom__sum__output_1_1sum__output__cs.tex [3943 <./structmom__checksum__ packages_1_1stats__coll__graph.pdf>] [3944 <./structmom__sum__output_1_1sum__ou tput__cs__coll__graph.pdf>] [3945]) (./structmom__variables_1_1surface.tex [3946] [3947 <./structmom__variables_1_1surface__coll__graph.pdf>]) (./structmom__diagnostics_1_1surface__diag__ids.tex [3948] [3949 <./structmom__ diagnostics_1_1surface__diag__ids__coll__graph.pdf>]) (./structmom__surface__forcing_1_1surface__forcing__cs.tex [3950] [3951 <./stru ctmom__surface__forcing_1_1surface__forcing__cs__coll__graph.pdf>] [3952] [3953] [3954] [3955]) (./structmom__surface__forcing__gfdl_1_1surface__forcing__cs.tex [3956] [3957 <./structmom__surface__forcing__gfdl_1_1surface__forcing__cs__coll__graph .pdf>] [3958] [3959]) (./structmom__variables_1_1thermo__var__ptrs.tex [3960] [3961 <./structmom__variables_1_1thermo__var__ptrs__coll__graph.pdf>]) (./structmom__thickness__diffuse_1_1thickness__diffuse__cs.tex [3962] [3963 <./ structmom__thickness__diffuse_1_1thickness__diffuse__cs__coll__graph.pdf>] [3964]) (./structtidal__bay__initialization_1_1tidal__bay__obc__cs.tex [3965]) (./structmom__tidal__forcing_1_1tidal__forcing__cs.tex [3966 <./structtidal__ba y__initialization_1_1tidal__bay__obc__cs__coll__graph.pdf>] [3967 <./structmom_ _tidal__forcing_1_1tidal__forcing__cs__coll__graph.pdf>]) (./structmom__tidal__mixing_1_1tidal__mixing__cs.tex [3968] [3969 <./structmom_ _tidal__mixing_1_1tidal__mixing__cs__coll__graph.pdf>] [3970] [3971]) (./structmom__tidal__mixing_1_1tidal__mixing__diags.tex [3972] [3973 <./structm om__tidal__mixing_1_1tidal__mixing__diags__coll__graph.pdf>]) (./structmom__tracer__advect_1_1tracer__advect__cs.tex [3974]) (./structmom__tracer__flow__control_1_1tracer__flow__control__cs.tex [3975 <./s tructmom__tracer__advect_1_1tracer__advect__cs__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3976] [3977 <./structmom__tracer__flow__control_1_1tracer__flow__control__cs__coll__g raph.pdf>] [3978]) (./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs.tex Underfull \vbox (badness 1237) has occurred while \output is active [3979] [3980 <./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs__coll__graph.pdf >] [3981]) (./structmom__tracer__registry_1_1tracer__registry__type.tex) (./structmom__tracer__registry_1_1tracer__type.tex [3982 <./structmom__tracer__ registry_1_1tracer__registry__type__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3983] [3984 <./structmom__tracer__registry_1_1tracer__type__coll__graph.pdf>] [3985] [3986]) (./structmom__diagnostics_1_1transport__diag__ids.tex [3987] [3988 <./structmom__diagnostics_1_1transport__diag__ids__coll__graph.pdf>]) (./interfacemom__checksums_1_1uchksum.tex [3989] Package longtable Warning: Column widths have changed (longtable) in table 48.259 on input line 55. [3990] Underfull \vbox (badness 10000) has occurred while \output is active [3991] [3992] Package longtable Warning: Column widths have changed (longtable) in table 48.260 on input line 265. [3993] Underfull \vbox (badness 10000) has occurred while \output is active [3994]) (./structmom__unit__scaling_1_1unit__scale__type.tex [3995] [3996 <./structmom_ _unit__scaling_1_1unit__scale__type__coll__graph.pdf>]) (./structmom__boundary__update_1_1update__obc__cs.tex [3997] [3998 <./structmom __boundary__update_1_1update__obc__cs__coll__graph.pdf>]) (./structuser__change__diffusivity_1_1user__change__diff__cs.tex [3999 <./struc tuser__change__diffusivity_1_1user__change__diff__cs__coll__graph.pdf>]) (./structuser__shelf__init_1_1user__ice__shelf__cs.tex [4000]) (./structuser__revise__forcing_1_1user__revise__forcing__cs.tex [4001 <./struct user__shelf__init_1_1user__ice__shelf__cs__coll__graph.pdf>]) (./structuser__surface__forcing_1_1user__surface__forcing__cs.tex [4002 <./stru ctuser__revise__forcing_1_1user__revise__forcing__cs__coll__graph.pdf>] [4003 <./structuser__surface__forcing_1_1user__surface__forcing__cs__coll__grap h.pdf>]) (./structuser__tracer__example_1_1user__tracer__example__cs.tex [4004 <./structuser__tracer__example_1_1user__tracer__example__cs__coll__graph. pdf>]) (./interfacemom__checksums_1_1uvchksum.tex [4005] Package longtable Warning: Column widths have changed (longtable) in table 48.261 on input line 59. Overfull \vbox (17.3705pt too high) has occurred while \output is active [4006] [4007] [4008] Package longtable Warning: Column widths have changed (longtable) in table 48.262 on input line 151. [4009]) (./structmom__io_1_1vardesc.tex [4010 <./structmom__io_1_1vardesc__coll __graph.pdf>]) (./structmom__lateral__mixing__coeffs_1_1varmix__cs.tex [4011 <. /structmom__lateral__mixing__coeffs_1_1varmix__cs__coll__graph.pdf>] [4012] [4013] [4014]) (./interfacemom__checksums_1_1vchksum.tex [4015] Package longtable Warning: Column widths have changed (longtable) in table 48.263 on input line 55. [4016] Underfull \vbox (badness 10000) has occurred while \output is active [4017] Package longtable Warning: Column widths have changed (longtable) in table 48.264 on input line 265. Overfull \vbox (14.08534pt too high) has occurred while \output is active [4018] [4019] Underfull \vbox (badness 10000) has occurred while \output is active [4020]) (./interfacemom__debugging_1_1vec__chksum.tex [4021] Package longtable Warning: Column widths have changed (longtable) in table 48.265 on input line 51. Package longtable Warning: Column widths have changed (longtable) in table 48.266 on input line 105. Overfull \vbox (18.60503pt too high) has occurred while \output is active [4022]) (./interfacemom__debugging_1_1vec__chksum__a.tex [4023] Package longtable Warning: Column widths have changed (longtable) in table 48.267 on input line 51. [4024] Package longtable Warning: Column widths have changed (longtable) in table 48.268 on input line 106. ) (./interfacemom__debugging_1_1vec__chksum__b.tex [4025] Package longtable Warning: Column widths have changed (longtable) in table 48.269 on input line 49. [4026] Package longtable Warning: Column widths have changed (longtable) in table 48.270 on input line 106. [4027]) (./interfacemom__debugging_1_1vec__chksum__c.tex [4028] Package longtable Warning: Column widths have changed (longtable) in table 48.271 on input line 51. Package longtable Warning: Column widths have changed (longtable) in table 48.272 on input line 105. Overfull \vbox (18.60503pt too high) has occurred while \output is active [4029]) (./structmom__verticalgrid_1_1verticalgrid__type.tex [4030 <./structmom __verticalgrid_1_1verticalgrid__type__coll__graph.pdf>] [4031]) (./structmom__vert__friction_1_1vertvisc__cs.tex [4032] [4033 <./structmom__ver t__friction_1_1vertvisc__cs__coll__graph.pdf>] [4034] [4035]) (./structmom__variables_1_1vertvisc__type.tex [4036] [4037 <./structmom__variab les_1_1vertvisc__type__coll__graph.pdf>]) (./structmom__wave__interface_1_1wave__parameters__cs.tex [4038] [4039 <./struc tmom__wave__interface_1_1wave__parameters__cs__coll__graph.pdf>]) (./structmom__wave__speed_1_1wave__speed__cs.tex [4040] [4041 <./structmom__wav e__speed_1_1wave__speed__cs__coll__graph.pdf>]) (./structmom__wave__structure_1_1wave__structure__cs.tex [4042 <./structmom__wa ve__structure_1_1wave__structure__cs__coll__graph.pdf>]) (./structmom__write__cputime_1_1write__cputime__cs.tex [4043]) (./structcoord__zlike_1_1zlike__cs.tex [4044 <./structmom__write__cputime_1_1wr ite__cputime__cs__coll__graph.pdf>]) [4045 <./structcoord__zlike_1_1zlike__cs__ coll__graph.pdf>] [4046] Chapter 49. (./MOM__memory_8h.tex Underfull \hbox (badness 8189) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/config[]_[]src/dynamic[] _[]symmetric/[]M[]O[]M[]_[]memory.h File [4047 <./MOM__memory_8h__incl.pdf>]) (./MOM__memory__macros_8h.tex Underfull \hbox (badness 10000) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/src/framework/[]M[]O[]M[ ]_[]memory[]_[]macros.h File Ref-er- [4048] [4049 <./MOM__memory__macros_8h__dep__incl.pdf>] [4050] [4051] [4052]) [4053] No file refman.bbl. [4054] No file refman.ind. Package natbib Warning: There were undefined citations. Package longtable Warning: Table widths have changed. Rerun LaTeX. (./refman.aux) Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information)pdfTeX warning (dest): name {MESO__surface__forcing_8F90_source} has been referenced but does not exist, re placed by a fixed one pdfTeX warning (dest): name{MOM__diabatic__aux_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__tidal__mixing_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__kappa__shear_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__barotropic_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM_8F90_source} has been referenced but does not e xist, replaced by a fixed one pdfTeX warning (dest): name{MOM__variables_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__surface__forcing_8F90_source} has been referen ced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{write__ocean__obs_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__types_8F90_source} has been referenced b ut does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__core_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{kdtree_8f90_source} has been referenced but does no t exist, replaced by a fixed one {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb> Output written on refman.pdf (4058 pages, 14395026 bytes). Transcript written on refman.log. makeindex refman.idx This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support). Scanning input file refman.idx........done (4546 entries accepted, 0 rejected). Sorting entries............................................done (61417 comparisons). Generating output file refman.ind........done (7325 lines written, 0 warnings). Output written in refman.ind. Transcript written in refman.ilg. bibtex refman This is BibTeX, Version 0.99d (TeX Live 2019/Debian) The top-level auxiliary file: refman.aux The style file: plain.bst Database file #1: bibTmpFile_1.bib Database file #2: bibTmpFile_2.bib Database file #3: bibTmpFile_3.bib Warning--there's a number but no series in millero1978 (There was 1 warning) pdflatex -interaction=nonstopmode refman This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./refman.tex LaTeX2e <2020-02-02> patch level 2 L3 programming layer <2020-02-14> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2019/12/20 v1.4l Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/fixltx2e.sty Package fixltx2e Warning: fixltx2e is not required with releases after 2015 (fixltx2e) All fixes are now in the LaTeX kernel. (fixltx2e) See the latexrelease package for details. ) (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty) (./doxygen.sty (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/colortbl/colortbl.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tabu/tabu.sty (/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/tabularx.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty)) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjustbox.sty (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/trimclip.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg))) (/usr/share/texlive/texmf-dist/tex/latex/collectbox/collectbox.sty) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/tc-pdftex.def)) (/usr/share/texlive/texmf-dist/tex/latex/ifoddpage/ifoddpage.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/wasysym.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/helvet.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/courier.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/sectsty/sectsty.sty LaTeX Warning: Command \underbar has changed. Check if current package is valid. LaTeX Warning: Command \underline has changed. Check if current package is valid. ) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/tocloft/tocloft.sty) Writing index file refman.idx (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/backref.sty (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty) (/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty) (/usr/share/texlive/texmf-dist/tex/latex/caption/ltcaption.sty)) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def) (./refman.aux LaTeX Warning: Label `namespacemom__diag__mediator_downsampling' multiply defin ed. ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (./refman.out) (./refman.out) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/uwasy.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] [2] (./refman.toc [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71]) [72] Chapter 1. (./index.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd)) [1] [2] Chapter 2. (./ALE.tex Package natbib Warning: Citation `adcroft2006' on page 3 undefined on input lin e 2. Package natbib Warning: Citation `bleck2002' on page 3 undefined on input line 2. Package natbib Warning: Citation `hirt1997' on page 3 undefined on input line 2 . Package natbib Warning: Citation `dukowicz2000' on page 3 undefined on input li ne 2. Package natbib Warning: Citation `white2008' on page 3 undefined on input line 6. Package natbib Warning: Citation `white2009' on page 3 undefined on input line 6. LaTeX Font Warning: Font shape `U/wasy/b/n' in size <7> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. LaTeX Font Warning: Font shape `U/wasy/b/n' in size <5> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. [3] Package natbib Warning: Citation `hallberg2009' on page 4 undefined on input li ne 14. ) [4] Chapter 3. (./ALE_Timestep.tex [5 <./remapping1.png>] Underfull \vbox (badness 10000) has occurred while \output is active [6 <./rema pping2.png>]) [7 <./remapping3.png>] [8] Chapter 4. (./Baroclinic_Momentum_Equations.tex Package natbib Warning: Citation `shchepetkin2005' on page 9 undefined on input line 6. Underfull \vbox (badness 7326) has occurred while \output is active [9] Underfull \vbox (badness 10000) has occurred while \output is active [10 <./tim estep_MOM6.png>]) [11 <./timestep_ROMS.png>] [12] Chapter 5. (./Barotropic_Baroclinic_Coupling.tex [13] Package natbib Warning: Citation `hallberg2009' on page 14 undefined on input l ine 26. [14] [15] Underfull \vbox (badness 10000) has occurred while \output is active [16 <./h_P PM.png>] [17 <./Newton_PPM.png>] Underfull \vbox (badness 4699) has occurred while \output is active [18] [19 <./bottom_drag.png>] [20]) [21 <./bt_bc_thickness.png>] [22] Chapter 6. (./Barotropic_Momentum_Equations.tex Package natbib Warning: Citation `bleck1990' on page 23 undefined on input line 19. Package natbib Warning: Citation `hallberg1997a' on page 23 undefined on input line 19. ) [23] [24] Chapter 7. (./Discrete_Coriolis.tex Package natbib Warning: Citation `sadourny1975' on page 25 undefined on input l ine 9. Package natbib Warning: Citation `sadourny1975' on page 25 undefined on input l ine 13. Package natbib Warning: Citation `arakawa1981' on page 25 undefined on input li ne 15. [25] Package natbib Warning: Citation `arakawa1990' on page 26 undefined on input li ne 17. ) [26] [27] [28] Chapter 8. (./Discrete_Grids.tex [29 <./Arakawa_C_grid.png>] [30 <./Grid_metrics.png>]) [31 <./cell_3d.png>] [32] Chapter 9. (./Discrete_OBC.tex) [33] [34] Chapter 10. (./Discrete_PG.tex Package natbib Warning: Citation `adcroft2008' on page 35 undefined on input li ne 2. Package natbib Warning: Citation `hallberg1997' on page 35 undefined on input l ine 4. Package natbib Warning: Citation `sun1999' on page 35 undefined on input line 4 . Package natbib Warning: Citation `hallberg2005' on page 35 undefined on input l ine 4. Package natbib Warning: Citation `adcroft2008' on page 35 undefined on input li ne 4. [35] Package natbib Warning: Citation `wright1997' on page 36 undefined on input lin e 19. [36 <./PG_loop.png>]) [37] [38] Chapter 11. (./Energetic_Consistency.tex) [39] [40] Chapter 12. (./Finite_Difference_Operators.tex) [41] [42] Chapter 13. (./General_Coordinate.tex Package natbib Warning: Citation `bleck2002' on page 43 undefined on input line 9. Package natbib Warning: Citation `adcroft2008' on page 43 undefined on input li ne 13. Package natbib Warning: Citation `white2008' on page 43 undefined on input line 13. Package natbib Warning: Citation `white2009' on page 43 undefined on input line 13. ) [43] [44] Chapter 14. (./Governing_Equations.tex Package natbib Warning: Citation `wright1997' on page 45 undefined on input lin e 7. [45]) [46] Chapter 15. (./Notation.tex) [47] [48] Chapter 16. (./PPM.tex Package natbib Warning: Citation `colella1984' on page 49 undefined on input li ne 2. Package natbib Warning: Citation `carpenter1990' on page 49 undefined on input line 2. Underfull \vbox (badness 5374) has occurred while \output is active [49] [50 <./ppm_arc.png>] Package natbib Warning: Citation `colella1984' on page 51 undefined on input li ne 29. Package natbib Warning: Citation `huynh1997' on page 51 undefined on input line 29. ) [51] [52] Chapter 17. (./Sea_Ice.tex) [53] [54] Chapter 18. (./Solar_Radiation.tex) [55] [56] Chapter 19. (./Specifics.tex Package natbib Warning: Citation `sadourny1975' on page 57 undefined on input l ine 5. Package natbib Warning: Citation `SMGbook' on page 57 undefined on input line 7 . Package natbib Warning: Citation `griffies2000' on page 57 undefined on input l ine 9. [57] Package natbib Warning: Citation `adcroft2008' on page 58 undefined on input li ne 10. Package natbib Warning: Citation `bleck2002' on page 58 undefined on input line 10. Package natbib Warning: Citation `colella1984' on page 58 undefined on input li ne 11. Package natbib Warning: Citation `fox-kemper2011' on page 58 undefined on input line 15. Package natbib Warning: Citation `gent1995' on page 58 undefined on input line 15. Package natbib Warning: Citation `mcdougall2001' on page 58 undefined on input line 15. Package natbib Warning: Citation `GVbook' on page 58 undefined on input line 16 . Package natbib Warning: Citation `wright1997' on page 58 undefined on input lin e 16. Package natbib Warning: Citation `TEOS2010' on page 58 undefined on input line 16. Package natbib Warning: Citation `wright1997' on page 58 undefined on input lin e 16. ) [58] Chapter 20. (./Timestep_Overview.tex) [59 <./timesteps_4.png>] [60] Chapter 21. (./Equation_of_State.tex Package natbib Warning: Citation `wright1997' on page 61 undefined on input lin e 3. Package natbib Warning: Citation `roquet2015' on page 61 undefined on input lin e 4. Package natbib Warning: Citation `jackett1995' on page 61 undefined on input li ne 5. [61] Package natbib Warning: Citation `millero1978' on page 62 undefined on input li ne 12. ) [62] Chapter 22. (./Diagnostics.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. [63] [64] [65] [66]) [67] [68] Chapter 23. (./Domain_Decomposition.tex) [69] [70] Chapter 24. (./Global_Grids.tex) [71] [72] Chapter 25. (./Horizontal_Indexing.tex Underfull \vbox (badness 7981) has occurred while \output is active [73] [74] Underfull \vbox (badness 10000) has occurred while \output is active [75 <./Hor izontal_NE_indexing_nonsym.png>] Underfull \hbox (badness 10000) in paragraph at lines 54--55 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed) []:[]: D !$\ OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at h-points Overfull \hbox (16.7466pt too wide) in paragraph at lines 55--56 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed, GV%ke) []:[] : h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Layer thickness [76 <./Horizontal_NE_indexing_sym.png>] Underfull \hbox (badness 10000) in paragraph at lines 61--62 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%jsd[]:HI%jed, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow Underfull \hbox (badness 10000) in paragraph at lines 67--68 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%JsdB[]:HI%JedB, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow Overfull \hbox (16.7466pt too wide) in paragraph at lines 72--73 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB) []:[]: D q !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at q-points Overfull \hbox (16.7466pt too wide) in paragraph at lines 73--74 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB, GV%ke) [ ]:[]: vort !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Vertical ) [77] [78] Chapter 26. (./Parallel_IO.tex) [79] [80] Chapter 27. (./Regional_Grids.tex) [81] [82] Chapter 28. (./Runtime_Parameter_System.tex [83] [84]) [85] [86] Chapter 29. (./Testing.tex Underfull \hbox (badness 10000) detected at line 12 [][][] [87] [88 <./consortium.png>] Underfull \hbox (badness 10000) detected at line 73 [][][] [89] [90 <./Rotated_indices.png>]) [91] [92] Chapter 30. (./Vertical_Grids.tex) [93] [94] Chapter 31. (./CVMix_KPP.tex Package natbib Warning: Citation `large1994' on page 95 undefined on input line 1. Package natbib Warning: Citation `large1994' on page 95 undefined on input line 4. [95] Underfull \hbox (badness 10000) detected at line 10 [][][] ) [96] Chapter 32. (./Tracer_Advection.tex Package natbib Warning: Citation `easter1993' on page 97 undefined on input lin e 1. Package natbib Warning: Citation `colella1984' on page 97 undefined on input li ne 1. Package natbib Warning: Citation `huynh1997' on page 97 undefined on input line 1. Package natbib Warning: Citation `lin1994' on page 97 undefined on input line 5 . [97]) [98] Chapter 33. (./Discrete_Tracer.tex) [99] [100] Chapter 34. (./Horizontal_Diffusion.tex [101 <./eddy_fluxes.png>] Package natbib Warning: Citation `shao2019-in-review' on page 102 undefined on input line 17. [102 <./shao0.png>] [103 <./shao1.png>] [104 <./shao2.png>] [105 <./shao3.png>] Underfull \vbox (badness 10000) has occurred while \output is active [106 <./sh ao4.png>] Underfull \vbox (badness 6825) has occurred while \output is active [107 <./sha o5.png>] Underfull \vbox (badness 10000) has occurred while \output is active [108 <./sb l1.png>]) [109 <./sbl2.png>] [110] Chapter 35. (./Passive_Tracers.tex) [111] [112] Chapter 36. (./Tracer_Fluxes.tex) [113] [114] Chapter 37. (./Tracer_Timestep.tex) [115] [116] Chapter 38. (./Tracer_Transport_Equations.tex [117 <./PPM_1d.png>] Package natbib Warning: Citation `easter1993' on page 118 undefined on input li ne 15. [118] Package natbib Warning: Citation `easter1993' on page 119 undefined on input li ne 50. Package natbib Warning: Citation `durran2010' on page 119 undefined on input li ne 50. Package natbib Warning: Citation `russell1981' on page 119 undefined on input l ine 50. ) [119] [120] Chapter 39. (./Vertical_Diffusion.tex) [121] [122] Chapter 40. (./md__home_cermak_src_MOM6_8devrob_config_src_external_GFDL_ocean_BGC_README.t ex) [123] [124] Chapter 41. (./md__home_cermak_src_MOM6_8devrob_config_src_external_ODA_hooks_README.tex) [125] [126] Chapter 42. (./md__home_cermak_src_MOM6_8devrob_config_src_external_README.tex) [127] [128] Chapter 43. (./todo.tex [129]) [130] Chapter 44. (./namespaces.tex [131] Underfull \vbox (badness 6708) has occurred while \output is active [132] Underfull \vbox (badness 10000) has occurred while \output is active [133] [134] Underfull \vbox (badness 7667) has occurred while \output is active [135] Underfull \vbox (badness 6708) has occurred while \output is active [136] Underfull \vbox (badness 7667) has occurred while \output is active [137] [138]) [139] [140] Chapter 45. (./annotated.tex [141] Underfull \vbox (badness 10000) has occurred while \output is active [142] [143] Underfull \vbox (badness 5908) has occurred while \output is active [144] [145] Underfull \vbox (badness 6708) has occurred while \output is active [146] [147] [148] Underfull \vbox (badness 5908) has occurred while \output is active [149] Underfull \vbox (badness 5231) has occurred while \output is active [150] Underfull \vbox (badness 10000) has occurred while \output is active [151] Underfull \vbox (badness 6708) has occurred while \output is active [152]) [153] [154] Chapter 46. (./files.tex LaTeX Warning: Reference `MOM__surface__forcing__gfdl_8F90' on page 155 undefin ed on input line 3. LaTeX Warning: Reference `ocean__model__MOM_8F90' on page 155 undefined on inpu t line 4. LaTeX Warning: Reference `FMS__coupler__util_8F90' on page 155 undefined on inp ut line 6. LaTeX Warning: Reference `generic__tracer_8F90' on page 155 undefined on input line 7. LaTeX Warning: Reference `generic__tracer__utils_8F90' on page 155 undefined on input line 8. LaTeX Warning: Reference `kdtree_8f90' on page 155 undefined on input line 9. LaTeX Warning: Reference `ocean__da__core_8F90' on page 155 undefined on input line 10. LaTeX Warning: Reference `ocean__da__types_8F90' on page 155 undefined on input line 11. LaTeX Warning: Reference `write__ocean__obs_8F90' on page 155 undefined on inpu t line 12. LaTeX Warning: Reference `atmos__ocean__fluxes_8F90' on page 155 undefined on i nput line 13. LaTeX Warning: Reference `MESO__surface__forcing_8F90' on page 155 undefined on input line 14. LaTeX Warning: Reference `MOM__driver_8F90' on page 155 undefined on input line 15. LaTeX Warning: Reference `MOM__surface__forcing_8F90' on page 155 undefined on input line 16. LaTeX Warning: Reference `user__surface__forcing_8F90' on page 155 undefined on input line 17. LaTeX Warning: Reference `coord__adapt_8F90' on page 155 undefined on input lin e 18. LaTeX Warning: Reference `coord__hycom_8F90' on page 155 undefined on input lin e 19. LaTeX Warning: Reference `coord__rho_8F90' on page 155 undefined on input line 20. LaTeX Warning: Reference `coord__sigma_8F90' on page 155 undefined on input lin e 21. LaTeX Warning: Reference `coord__slight_8F90' on page 155 undefined on input li ne 22. LaTeX Warning: Reference `coord__zlike_8F90' on page 155 undefined on input lin e 23. LaTeX Warning: Reference `MOM__ALE_8F90' on page 155 undefined on input line 24 . LaTeX Warning: Reference `MOM__regridding_8F90' on page 155 undefined on input line 25. LaTeX Warning: Reference `MOM__remapping_8F90' on page 155 undefined on input l ine 26. LaTeX Warning: Reference `P1M__functions_8F90' on page 155 undefined on input l ine 27. LaTeX Warning: Reference `P3M__functions_8F90' on page 155 undefined on input l ine 28. LaTeX Warning: Reference `PCM__functions_8F90' on page 155 undefined on input l ine 29. LaTeX Warning: Reference `PLM__functions_8F90' on page 155 undefined on input l ine 30. LaTeX Warning: Reference `polynomial__functions_8F90' on page 155 undefined on input line 31. LaTeX Warning: Reference `PPM__functions_8F90' on page 155 undefined on input l ine 32. LaTeX Warning: Reference `PQM__functions_8F90' on page 155 undefined on input l ine 33. LaTeX Warning: Reference `regrid__consts_8F90' on page 155 undefined on input l ine 34. LaTeX Warning: Reference `regrid__edge__values_8F90' on page 155 undefined on i nput line 35. LaTeX Warning: Reference `regrid__interp_8F90' on page 155 undefined on input l ine 36. [155] LaTeX Warning: Reference `regrid__solvers_8F90' on page 156 undefined on input line 37. LaTeX Warning: Reference `MOM_8F90' on page 156 undefined on input line 38. LaTeX Warning: Reference `MOM__barotropic_8F90' on page 156 undefined on input line 39. LaTeX Warning: Reference `MOM__boundary__update_8F90' on page 156 undefined on input line 40. LaTeX Warning: Reference `MOM__checksum__packages_8F90' on page 156 undefined o n input line 41. LaTeX Warning: Reference `MOM__continuity_8F90' on page 156 undefined on input line 42. LaTeX Warning: Reference `MOM__continuity__PPM_8F90' on page 156 undefined on i nput line 43. LaTeX Warning: Reference `MOM__CoriolisAdv_8F90' on page 156 undefined on input line 44. LaTeX Warning: Reference `MOM__density__integrals_8F90' on page 156 undefined o n input line 45. LaTeX Warning: Reference `MOM__dynamics__split__RK2_8F90' on page 156 undefined on input line 46. LaTeX Warning: Reference `MOM__dynamics__unsplit_8F90' on page 156 undefined on input line 47. LaTeX Warning: Reference `MOM__dynamics__unsplit__RK2_8F90' on page 156 undefin ed on input line 48. LaTeX Warning: Reference `MOM__forcing__type_8F90' on page 156 undefined on inp ut line 49. LaTeX Warning: Reference `MOM__grid_8F90' on page 156 undefined on input line 5 0. LaTeX Warning: Reference `MOM__interface__heights_8F90' on page 156 undefined o n input line 51. LaTeX Warning: Reference `MOM__isopycnal__slopes_8F90' on page 156 undefined on input line 52. LaTeX Warning: Reference `MOM__open__boundary_8F90' on page 156 undefined on in put line 53. LaTeX Warning: Reference `MOM__PressureForce_8F90' on page 156 undefined on inp ut line 54. LaTeX Warning: Reference `MOM__PressureForce__FV_8F90' on page 156 undefined on input line 55. LaTeX Warning: Reference `MOM__PressureForce__Montgomery_8F90' on page 156 unde fined on input line 56. LaTeX Warning: Reference `MOM__transcribe__grid_8F90' on page 156 undefined on input line 57. LaTeX Warning: Reference `MOM__unit__tests_8F90' on page 156 undefined on input line 58. LaTeX Warning: Reference `MOM__variables_8F90' on page 156 undefined on input l ine 59. LaTeX Warning: Reference `MOM__verticalGrid_8F90' on page 156 undefined on inpu t line 60. LaTeX Warning: Reference `MOM__debugging_8F90' on page 156 undefined on input l ine 61. LaTeX Warning: Reference `MOM__diagnostics_8F90' on page 156 undefined on input line 62. LaTeX Warning: Reference `MOM__obsolete__diagnostics_8F90' on page 156 undefine d on input line 63. LaTeX Warning: Reference `MOM__obsolete__params_8F90' on page 156 undefined on input line 64. LaTeX Warning: Reference `MOM__PointAccel_8F90' on page 156 undefined on input line 65. LaTeX Warning: Reference `MOM__sum__output_8F90' on page 156 undefined on input line 66. LaTeX Warning: Reference `MOM__wave__speed_8F90' on page 156 undefined on input line 67. LaTeX Warning: Reference `MOM__wave__structure_8F90' on page 156 undefined on i nput line 68. LaTeX Warning: Reference `MOM__EOS_8F90' on page 156 undefined on input line 69 . LaTeX Warning: Reference `MOM__EOS__linear_8F90' on page 156 undefined on input line 70. LaTeX Warning: Reference `MOM__EOS__NEMO_8F90' on page 156 undefined on input l ine 71. LaTeX Warning: Reference `MOM__EOS__TEOS10_8F90' on page 156 undefined on input line 72. LaTeX Warning: Reference `MOM__EOS__UNESCO_8F90' on page 156 undefined on input line 73. LaTeX Warning: Reference `MOM__EOS__Wright_8F90' on page 156 undefined on input line 74. LaTeX Warning: Reference `MOM__TFreeze_8F90' on page 156 undefined on input lin e 75. LaTeX Warning: Reference `MOM__array__transform_8F90' on page 156 undefined on input line 76. LaTeX Warning: Reference `MOM__checksums_8F90' on page 156 undefined on input l ine 77. LaTeX Warning: Reference `MOM__coms_8F90' on page 156 undefined on input line 7 8. LaTeX Warning: Reference `MOM__constants_8F90' on page 156 undefined on input l ine 79. LaTeX Warning: Reference `MOM__cpu__clock_8F90' on page 156 undefined on input line 80. LaTeX Warning: Reference `MOM__diag__manager__wrapper_8F90' on page 156 undefin ed on input line 81. LaTeX Warning: Reference `MOM__diag__mediator_8F90' on page 156 undefined on in put line 82. LaTeX Warning: Reference `MOM__diag__remap_8F90' on page 156 undefined on input line 83. LaTeX Warning: Reference `MOM__diag__vkernels_8F90' on page 156 undefined on in put line 84. LaTeX Warning: Reference `MOM__document_8F90' on page 156 undefined on input li ne 85. LaTeX Warning: Reference `MOM__domains_8F90' on page 156 undefined on input lin e 86. LaTeX Warning: Reference `MOM__dyn__horgrid_8F90' on page 156 undefined on inpu t line 87. [156] LaTeX Warning: Reference `MOM__error__handler_8F90' on page 157 undefined on in put line 88. LaTeX Warning: Reference `MOM__file__parser_8F90' on page 157 undefined on inpu t line 89. LaTeX Warning: Reference `MOM__get__input_8F90' on page 157 undefined on input line 90. LaTeX Warning: Reference `MOM__hor__index_8F90' on page 157 undefined on input line 91. LaTeX Warning: Reference `MOM__horizontal__regridding_8F90' on page 157 undefin ed on input line 92. LaTeX Warning: Reference `MOM__intrinsic__functions_8F90' on page 157 undefined on input line 93. LaTeX Warning: Reference `MOM__io_8F90' on page 157 undefined on input line 94. LaTeX Warning: Reference `MOM__random_8F90' on page 157 undefined on input line 96. LaTeX Warning: Reference `MOM__restart_8F90' on page 157 undefined on input lin e 97. LaTeX Warning: Reference `MOM__safe__alloc_8F90' on page 157 undefined on input line 98. LaTeX Warning: Reference `MOM__spatial__means_8F90' on page 157 undefined on in put line 99. LaTeX Warning: Reference `MOM__string__functions_8F90' on page 157 undefined on input line 100. LaTeX Warning: Reference `MOM__time__manager_8F90' on page 157 undefined on inp ut line 101. LaTeX Warning: Reference `MOM__transform__FMS_8F90' on page 157 undefined on in put line 102. LaTeX Warning: Reference `MOM__unit__scaling_8F90' on page 157 undefined on inp ut line 103. LaTeX Warning: Reference `MOM__write__cputime_8F90' on page 157 undefined on in put line 104. LaTeX Warning: Reference `version__variable_8h' on page 157 undefined on input line 105. LaTeX Warning: Reference `MOM__ice__shelf_8F90' on page 157 undefined on input line 106. LaTeX Warning: Reference `MOM__ice__shelf__dynamics_8F90' on page 157 undefined on input line 107. LaTeX Warning: Reference `MOM__ice__shelf__initialize_8F90' on page 157 undefin ed on input line 108. LaTeX Warning: Reference `MOM__ice__shelf__state_8F90' on page 157 undefined on input line 109. LaTeX Warning: Reference `MOM__marine__ice_8F90' on page 157 undefined on input line 110. LaTeX Warning: Reference `user__shelf__init_8F90' on page 157 undefined on inpu t line 111. LaTeX Warning: Reference `MOM__coord__initialization_8F90' on page 157 undefine d on input line 112. LaTeX Warning: Reference `MOM__fixed__initialization_8F90' on page 157 undefine d on input line 113. LaTeX Warning: Reference `MOM__grid__initialize_8F90' on page 157 undefined on input line 114. LaTeX Warning: Reference `MOM__shared__initialization_8F90' on page 157 undefin ed on input line 115. LaTeX Warning: Reference `MOM__state__initialization_8F90' on page 157 undefine d on input line 116. LaTeX Warning: Reference `MOM__tracer__initialization__from__Z_8F90' on page 15 7 undefined on input line 117. LaTeX Warning: Reference `MOM__oda__driver_8F90' on page 157 undefined on input line 118. LaTeX Warning: Reference `MOM__hor__visc_8F90' on page 157 undefined on input l ine 119. LaTeX Warning: Reference `MOM__internal__tides_8F90' on page 157 undefined on i nput line 120. LaTeX Warning: Reference `MOM__lateral__mixing__coeffs_8F90' on page 157 undefi ned on input line 121. LaTeX Warning: Reference `MOM__MEKE_8F90' on page 157 undefined on input line 1 22. LaTeX Warning: Reference `MOM__MEKE__types_8F90' on page 157 undefined on input line 123. LaTeX Warning: Reference `MOM__mixed__layer__restrat_8F90' on page 157 undefine d on input line 124. LaTeX Warning: Reference `MOM__thickness__diffuse_8F90' on page 157 undefined o n input line 125. LaTeX Warning: Reference `MOM__tidal__forcing_8F90' on page 157 undefined on in put line 126. LaTeX Warning: Reference `MOM__ALE__sponge_8F90' on page 157 undefined on input line 127. LaTeX Warning: Reference `MOM__bkgnd__mixing_8F90' on page 157 undefined on inp ut line 128. LaTeX Warning: Reference `MOM__bulk__mixed__layer_8F90' on page 157 undefined o n input line 129. LaTeX Warning: Reference `MOM__CVMix__conv_8F90' on page 157 undefined on input line 130. LaTeX Warning: Reference `MOM__CVMix__ddiff_8F90' on page 157 undefined on inpu t line 131. LaTeX Warning: Reference `MOM__CVMix__KPP_8F90' on page 157 undefined on input line 132. LaTeX Warning: Reference `MOM__CVMix__shear_8F90' on page 157 undefined on inpu t line 133. LaTeX Warning: Reference `MOM__diabatic__aux_8F90' on page 157 undefined on inp ut line 134. LaTeX Warning: Reference `MOM__diabatic__driver_8F90' on page 157 undefined on input line 135. LaTeX Warning: Reference `MOM__diapyc__energy__req_8F90' on page 157 undefined on input line 136. LaTeX Warning: Reference `MOM__energetic__PBL_8F90' on page 157 undefined on in put line 137. LaTeX Warning: Reference `MOM__entrain__diffusive_8F90' on page 157 undefined o n input line 138. LaTeX Warning: Reference `MOM__full__convection_8F90' on page 157 undefined on input line 139. LaTeX Warning: Reference `MOM__geothermal_8F90' on page 157 undefined on input line 140. [157] LaTeX Warning: Reference `MOM__internal__tide__input_8F90' on page 158 undefine d on input line 141. LaTeX Warning: Reference `MOM__kappa__shear_8F90' on page 158 undefined on inpu t line 142. LaTeX Warning: Reference `MOM__opacity_8F90' on page 158 undefined on input lin e 143. LaTeX Warning: Reference `MOM__regularize__layers_8F90' on page 158 undefined o n input line 144. LaTeX Warning: Reference `MOM__set__diffusivity_8F90' on page 158 undefined on input line 145. LaTeX Warning: Reference `MOM__set__viscosity_8F90' on page 158 undefined on in put line 146. LaTeX Warning: Reference `MOM__sponge_8F90' on page 158 undefined on input line 147. LaTeX Warning: Reference `MOM__tidal__mixing_8F90' on page 158 undefined on inp ut line 148. LaTeX Warning: Reference `MOM__vert__friction_8F90' on page 158 undefined on in put line 149. LaTeX Warning: Reference `advection__test__tracer_8F90' on page 158 undefined o n input line 150. LaTeX Warning: Reference `boundary__impulse__tracer_8F90' on page 158 undefined on input line 151. LaTeX Warning: Reference `DOME__tracer_8F90' on page 158 undefined on input lin e 152. LaTeX Warning: Reference `dye__example_8F90' on page 158 undefined on input lin e 153. LaTeX Warning: Reference `dyed__obc__tracer_8F90' on page 158 undefined on inpu t line 154. LaTeX Warning: Reference `ideal__age__example_8F90' on page 158 undefined on in put line 155. LaTeX Warning: Reference `ISOMIP__tracer_8F90' on page 158 undefined on input l ine 156. LaTeX Warning: Reference `MOM__generic__tracer_8F90' on page 158 undefined on i nput line 157. LaTeX Warning: Reference `MOM__lateral__boundary__diffusion_8F90' on page 158 u ndefined on input line 158. LaTeX Warning: Reference `MOM__neutral__diffusion_8F90' on page 158 undefined o n input line 159. LaTeX Warning: Reference `MOM__OCMIP2__CFC_8F90' on page 158 undefined on input line 160. LaTeX Warning: Reference `MOM__offline__aux_8F90' on page 158 undefined on inpu t line 161. LaTeX Warning: Reference `MOM__offline__main_8F90' on page 158 undefined on inp ut line 162. LaTeX Warning: Reference `MOM__tracer__advect_8F90' on page 158 undefined on in put line 163. LaTeX Warning: Reference `MOM__tracer__diabatic_8F90' on page 158 undefined on input line 164. LaTeX Warning: Reference `MOM__tracer__flow__control_8F90' on page 158 undefine d on input line 165. LaTeX Warning: Reference `MOM__tracer__hor__diff_8F90' on page 158 undefined on input line 166. LaTeX Warning: Reference `MOM__tracer__registry_8F90' on page 158 undefined on input line 167. LaTeX Warning: Reference `MOM__tracer__Z__init_8F90' on page 158 undefined on i nput line 168. LaTeX Warning: Reference `oil__tracer_8F90' on page 158 undefined on input line 169. LaTeX Warning: Reference `pseudo__salt__tracer_8F90' on page 158 undefined on i nput line 170. LaTeX Warning: Reference `RGC__tracer_8F90' on page 158 undefined on input line 171. LaTeX Warning: Reference `tracer__example_8F90' on page 158 undefined on input line 172. LaTeX Warning: Reference `adjustment__initialization_8F90' on page 158 undefine d on input line 173. LaTeX Warning: Reference `baroclinic__zone__initialization_8F90' on page 158 un defined on input line 174. LaTeX Warning: Reference `basin__builder_8F90' on page 158 undefined on input l ine 175. LaTeX Warning: Reference `benchmark__initialization_8F90' on page 158 undefined on input line 176. LaTeX Warning: Reference `BFB__initialization_8F90' on page 158 undefined on in put line 177. LaTeX Warning: Reference `BFB__surface__forcing_8F90' on page 158 undefined on input line 178. LaTeX Warning: Reference `circle__obcs__initialization_8F90' on page 158 undefi ned on input line 179. LaTeX Warning: Reference `dense__water__initialization_8F90' on page 158 undefi ned on input line 180. LaTeX Warning: Reference `DOME2d__initialization_8F90' on page 158 undefined on input line 181. LaTeX Warning: Reference `DOME__initialization_8F90' on page 158 undefined on i nput line 182. LaTeX Warning: Reference `dumbbell__initialization_8F90' on page 158 undefined on input line 183. LaTeX Warning: Reference `dumbbell__surface__forcing_8F90' on page 158 undefine d on input line 184. LaTeX Warning: Reference `dyed__channel__initialization_8F90' on page 158 undef ined on input line 185. LaTeX Warning: Reference `dyed__obcs__initialization_8F90' on page 158 undefine d on input line 186. LaTeX Warning: Reference `external__gwave__initialization_8F90' on page 158 und efined on input line 187. LaTeX Warning: Reference `Idealized__Hurricane_8F90' on page 158 undefined on i nput line 188. LaTeX Warning: Reference `ISOMIP__initialization_8F90' on page 158 undefined on input line 189. LaTeX Warning: Reference `Kelvin__initialization_8F90' on page 158 undefined on input line 190. LaTeX Warning: Reference `lock__exchange__initialization_8F90' on page 158 unde fined on input line 191. LaTeX Warning: Reference `MOM__controlled__forcing_8F90' on page 158 undefined on input line 192. LaTeX Warning: Reference `MOM__wave__interface_8F90' on page 158 undefined on i nput line 193. LaTeX Warning: Reference `Neverworld__initialization_8F90' on page 158 undefine d on input line 194. [158] LaTeX Warning: Reference `Phillips__initialization_8F90' on page 159 undefined on input line 195. LaTeX Warning: Reference `RGC__initialization_8F90' on page 159 undefined on in put line 196. LaTeX Warning: Reference `Rossby__front__2d__initialization_8F90' on page 159 u ndefined on input line 197. LaTeX Warning: Reference `SCM__CVMix__tests_8F90' on page 159 undefined on inpu t line 198. LaTeX Warning: Reference `seamount__initialization_8F90' on page 159 undefined on input line 199. LaTeX Warning: Reference `shelfwave__initialization_8F90' on page 159 undefined on input line 200. LaTeX Warning: Reference `sloshing__initialization_8F90' on page 159 undefined on input line 201. LaTeX Warning: Reference `soliton__initialization_8F90' on page 159 undefined o n input line 202. LaTeX Warning: Reference `supercritical__initialization_8F90' on page 159 undef ined on input line 203. LaTeX Warning: Reference `tidal__bay__initialization_8F90' on page 159 undefine d on input line 204. LaTeX Warning: Reference `user__change__diffusivity_8F90' on page 159 undefined on input line 205. LaTeX Warning: Reference `user__initialization_8F90' on page 159 undefined on i nput line 206. LaTeX Warning: Reference `user__revise__forcing_8F90' on page 159 undefined on input line 207. ) [159] [160] Chapter 47. (./namespaceadjustment__initialization.tex [161] [162] [163] [164] [165] Underfull \vbox (badness 10000) has occurred while \output is active [166]) (./namespaceadvection__test__tracer.tex [167] Underfull \hbox (badness 10000) detected at line 64 [][][] [168] [169] [170] [171] [172] Underfull \vbox (badness 10000) has occurred while \output is active [173] [174]) (./namespaceatmos__ocean__fluxes__mod.tex [175] [176]) (./namespacebaroclinic__zone__initialization.tex [177] [178] [179]) (./namespacebasin__builder.tex [180] [181] [182] [183] Underfull \vbox (badness 10000) has occurred while \output is active [184] Package longtable Warning: Column widths have changed (longtable) in table 47.15 on input line 302. [185] Package longtable Warning: Column widths have changed (longtable) in table 47.16 on input line 343. Package longtable Warning: Column widths have changed (longtable) in table 47.17 on input line 384. Overfull \vbox (26.22467pt too high) has occurred while \output is active [186] Package longtable Warning: Column widths have changed (longtable) in table 47.18 on input line 425. [187] Package longtable Warning: Column widths have changed (longtable) in table 47.19 on input line 467. Package longtable Warning: Column widths have changed (longtable) in table 47.20 on input line 512. [188] Package longtable Warning: Column widths have changed (longtable) in table 47.21 on input line 557. [189] Package longtable Warning: Column widths have changed (longtable) in table 47.22 on input line 602. [190] Package longtable Warning: Column widths have changed (longtable) in table 47.23 on input line 639. ) (./namespacebenchmark__initialization.tex [191] [192] [193] [194] [195] [196]) (./namespacebfb__initialization.tex [197] Overfull \vbox (6.91788pt too high) has occurred while \output is active [198] [199] [200] [201]) (./namespacebfb__surface__forcing.tex [202] [203] [204] [205]) (./namespaceboundary__impulse__tracer.tex [206] [207] Underfull \hbox (badness 10000) detected at line 75 [][][] [208] [209] [210] [211] [212] Overfull \vbox (16.42203pt too high) has occurred while \output is active [213] [214]) (./namespacecircle__obcs__initialization.tex [215] Underfull \vbox (badness 10000) has occurred while \output is active [216]) (./namespacecoord__adapt.tex [217] Package longtable Warning: Column widths have changed (longtable) in table 47.39 on input line 57. [218] Underfull \vbox (badness 10000) has occurred while \output is active [219] [220] [221]) (./namespacecoord__hycom.tex [222] Overfull \vbox (63.99036pt too high) has occurred while \output is active [223] [224] [225]) (./namespacecoord__rho.tex [226] [227] [228] [229] [230] Underfull \vbox (badness 10000) has occurred while \output is active [231] [232] [233] Overfull \vbox (8.41132pt too high) has occurred while \output is active [234] [235]) (./namespacecoord__sigma.tex [236] [237] [238]) (./namespacecoord__slight.tex Underfull \hbox (badness 5316) in paragraph at lines 18--19 []\T1/phv/m/n/10 subroutine, pub-lic [][]set[]_[]slight[]_[]params[][] (CS, max []_[]interface[]_[]depths, max[]_[]layer[]_[]thickness, min[]_[]thickness, Underfull \hbox (badness 940) in paragraph at lines 18--19 \T1/phv/m/n/10 compressibility[]_[]fraction, dz[]_[]ml[]_[]min, nz[]_[]fixed[]_ []surface, Rho[]_[][]M[]L[]_[]avg[]_[]depth, nlay[]_[][]M[]L[]_[]offset, fix[]_ []haloclines, [239] [240] Underfull \vbox (badness 10000) has occurred while \output is active [241] Underfull \vbox (badness 10000) has occurred while \output is active [242] Underfull \vbox (badness 10000) has occurred while \output is active [243] [244] [245] [246] Underfull \vbox (badness 10000) has occurred while \output is active [247] Underfull \vbox (badness 10000) has occurred while \output is active [248] [249] [250]) (./namespacecoord__zlike.tex [251] [252] [253] [254]) (./namespacedense__water__initialization.tex [255] [256] Underfull \vbox (badness 10000) has occurred while \output is active [257] Underfull \vbox (badness 10000) has occurred while \output is active [258] [259] [260]) (./namespacedome2d__initialization.tex [261] [262] Underfull \vbox (badness 10000) has occurred while \output is active [263] [264] Underfull \vbox (badness 10000) has occurred while \output is active [265] Overfull \vbox (16.8857pt too high) has occurred while \output is active [266] [267] Overfull \vbox (11.34378pt too high) has occurred while \output is active [268]) (./namespacedome__initialization.tex [269] Package longtable Warning: Column widths have changed (longtable) in table 47.74 on input line 44. [270] [271] [272] [273] [274] Underfull \vbox (badness 10000) has occurred while \output is active [275]) (./namespacedome__tracer.tex [276] [277] [278] [279] [280] [281] Underfull \vbox (badness 10000) has occurred while \output is active [282] [283]) (./namespacedumbbell__initialization.tex [284] Underfull \vbox (badness 10000) has occurred while \output is active [285] [286] Underfull \vbox (badness 10000) has occurred while \output is active [287] [288] [289] [290]) (./namespacedumbbell__surface__forcing.tex [291] Overfull \vbox (36.78252pt too high) has occurred while \output is active [292] [293] [294] [295]) (./namespacedyed__channel__initialization.tex [296] [297] [298] Package longtable Warning: Column widths have changed (longtable) in table 47.92 on input line 157. [299] [300]) (./namespacedyed__obc__tracer.tex [301] [302] [303] [304] Package longtable Warning: Column widths have changed (longtable) in table 47.96 on input line 186. [305] [306] [307]) (./namespacedyed__obcs__initialization.tex [308] [309]) (./namespaceexternal__gwave__initialization.tex [310]) (./namespaceg__tracer__utils.tex [311] [312] [313] Overfull \vbox (37.85315pt too high) has occurred while \output is active [314] [315] [316] Package longtable Warning: Column widths have changed (longtable) in table 47.107 on input line 334. [317] [318] Package longtable Warning: Column widths have changed (longtable) in table 47.109 on input line 424. [319] [320] [321] [322] [323] [324] Package longtable Warning: Column widths have changed (longtable) in table 47.119 on input line 766. [325]) (./namespacegeneric__tracer.tex [326] [327] [328] [329] [330] [331] [332] [333]) (./namespaceideal__age__example.tex [334] [335] Underfull \hbox (badness 10000) detected at line 99 [][][] [336] [337] [338] [339] Underfull \vbox (badness 10000) has occurred while \output is active [340] [341] [342] Underfull \vbox (badness 10000) has occurred while \output is active [343]) (./namespaceidealized__hurricane.tex [344] [345] Underfull \vbox (badness 10000) has occurred while \output is active [346] [347] [348] Package longtable Warning: Column widths have changed (longtable) in table 47.139 on input line 351. [349] Underfull \vbox (badness 10000) has occurred while \output is active [350] [351] Underfull \vbox (badness 10000) has occurred while \output is active [352] Underfull \vbox (badness 10000) has occurred while \output is active [353]) (./namespaceisomip__initialization.tex Overfull \hbox (53.15218pt too wide) in paragraph at lines 8--8 []\T1/phv/m/n/10 See this pa-per for details[]: [][]\T1/pcr/m/n/10 http[]://www .[]geosci-model-dev-discuss.[]net/8/9859/2015/gmdd-8-9859-2015.[] [354] Package longtable Warning: Column widths have changed (longtable) in table 47.141 on input line 56. [355] Underfull \vbox (badness 10000) has occurred while \output is active [356] Underfull \vbox (badness 10000) has occurred while \output is active [357] [358] [359] Underfull \vbox (badness 10000) has occurred while \output is active [360] [361] [362] [363] [364]) (./namespaceisomip__tracer.tex [365] [366] Underfull \vbox (badness 10000) has occurred while \output is active [367] [368] [369] [370] [371]) (./namespacekdtree.tex [372]) (./namespacekelvin__initialization.tex [373] [374] Package longtable Warning: Column widths have changed (longtable) in table 47.152 on input line 158. [375] Underfull \vbox (badness 10000) has occurred while \output is active [376] Underfull \vbox (badness 10000) has occurred while \output is active [377] [378]) (./namespacelock__exchange__initialization.tex [379] [380]) (./namespacemeso__surface__forcing.tex [381] [382] Underfull \vbox (badness 10000) has occurred while \output is active [383] Underfull \vbox (badness 10000) has occurred while \output is active [384]) (./namespacemom.tex [385] Underfull \hbox (badness 10000) detected at line 10 [][][] [386] [387] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \vbox (badness 10000) has occurred while \output is active [396] Underfull \vbox (badness 10000) has occurred while \output is active [397] Underfull \vbox (badness 10000) has occurred while \output is active [398] Underfull \vbox (badness 10000) has occurred while \output is active [399] [400] [401] [402] [403] [404] Underfull \vbox (badness 10000) has occurred while \output is active [405] Underfull \vbox (badness 10000) has occurred while \output is active [406] Underfull \vbox (badness 10000) has occurred while \output is active [407] Underfull \vbox (badness 10000) has occurred while \output is active [408] Underfull \vbox (badness 10000) has occurred while \output is active [409] Underfull \vbox (badness 10000) has occurred while \output is active [410] Underfull \vbox (badness 10000) has occurred while \output is active [411] Underfull \vbox (badness 10000) has occurred while \output is active [412] Underfull \vbox (badness 10000) has occurred while \output is active [413] Underfull \vbox (badness 10000) has occurred while \output is active [414] Underfull \vbox (badness 10000) has occurred while \output is active [415] Underfull \vbox (badness 10000) has occurred while \output is active [416] Underfull \vbox (badness 10000) has occurred while \output is active [417] [418] [419] Underfull \hbox (badness 10000) detected at line 2259 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.165 on input line 2299. [420] Package longtable Warning: Column widths have changed (longtable) in table 47.166 on input line 2360. [421] [422] [423] [424] Underfull \vbox (badness 10000) has occurred while \output is active [425] Underfull \vbox (badness 10000) has occurred while \output is active [426] Underfull \vbox (badness 10000) has occurred while \output is active [427] Underfull \vbox (badness 10000) has occurred while \output is active [428] Underfull \vbox (badness 10000) has occurred while \output is active [429] [430] [431] Underfull \vbox (badness 10000) has occurred while \output is active [432] [433] [434] Underfull \vbox (badness 10000) has occurred while \output is active [435] [436] [437] Underfull \vbox (badness 10000) has occurred while \output is active [438] [439] Underfull \vbox (badness 10000) has occurred while \output is active [440]) (./namespacemom__ale.tex [441] [442] Package longtable Warning: Column widths have changed (longtable) in table 47.173 on input line 93. Underfull \vbox (badness 10000) has occurred while \output is active [443] [444] [445] [446] [447] Overfull \vbox (24.87663pt too high) has occurred while \output is active [448] Package longtable Warning: Column widths have changed (longtable) in table 47.180 on input line 473. [449] [450] [451] Package longtable Warning: Column widths have changed (longtable) in table 47.182 on input line 649. [452] Package longtable Warning: Column widths have changed (longtable) in table 47.183 on input line 741. [453] [454] Package longtable Warning: Column widths have changed (longtable) in table 47.184 on input line 851. [455] [456] Package longtable Warning: Column widths have changed (longtable) in table 47.186 on input line 1017. Underfull \vbox (badness 10000) has occurred while \output is active [457] Underfull \hbox (badness 10000) in paragraph at lines 1065--1066 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional [458] Package longtable Warning: Column widths have changed (longtable) in table 47.187 on input line 1099. [459] [460] [461] Package longtable Warning: Column widths have changed (longtable) in table 47.190 on input line 1339. [462] [463] [464] [465] [466] Underfull \vbox (badness 10000) has occurred while \output is active [467] [468] [469] [470]) (./namespacemom__ale__sponge.tex [471] [472] Package longtable Warning: Column widths have changed (longtable) in table 47.198 on input line 134. Overfull \vbox (10.4989pt too high) has occurred while \output is active [473] [474] Underfull \vbox (badness 10000) has occurred while \output is active [475] Underfull \vbox (badness 10000) has occurred while \output is active [476] Underfull \hbox (badness 10000) detected at line 373 [][][] [477] Package longtable Warning: Column widths have changed (longtable) in table 47.201 on input line 472. [478] [479] Underfull \vbox (badness 10000) has occurred while \output is active [480] [481] [482] Underfull \vbox (badness 10000) has occurred while \output is active [483] [484] Underfull \vbox (badness 10000) has occurred while \output is active [485] Package longtable Warning: Column widths have changed (longtable) in table 47.205 on input line 1082. [486] Underfull \vbox (badness 10000) has occurred while \output is active [487] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [488] Package longtable Warning: Column widths have changed (longtable) in table 47.207 on input line 1244. Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [489] [490] Underfull \hbox (badness 10000) in paragraph at lines 1413--1414 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), target \T1/pcr/m/sl/8 p[]_[]new [491] Package longtable Warning: Column widths have changed (longtable) in table 47.209 on input line 1431. ) (./namespacemom__array__transform.tex [492] [493] Package longtable Warning: Column widths have changed (longtable) in table 47.210 on input line 77. Package longtable Warning: Column widths have changed (longtable) in table 47.211 on input line 119. [494] Package longtable Warning: Column widths have changed (longtable) in table 47.212 on input line 162. [495] Package longtable Warning: Column widths have changed (longtable) in table 47.213 on input line 205. Package longtable Warning: Column widths have changed (longtable) in table 47.214 on input line 246. [496] Package longtable Warning: Column widths have changed (longtable) in table 47.215 on input line 292. [497] Package longtable Warning: Column widths have changed (longtable) in table 47.216 on input line 342. Package longtable Warning: Column widths have changed (longtable) in table 47.217 on input line 385. Underfull \vbox (badness 10000) has occurred while \output is active [498] Package longtable Warning: Column widths have changed (longtable) in table 47.218 on input line 428. [499] Package longtable Warning: Column widths have changed (longtable) in table 47.219 on input line 466. Package longtable Warning: Column widths have changed (longtable) in table 47.220 on input line 512. Underfull \vbox (badness 10000) has occurred while \output is active [500] Package longtable Warning: Column widths have changed (longtable) in table 47.221 on input line 547. [501] Package longtable Warning: Column widths have changed (longtable) in table 47.222 on input line 586. Package longtable Warning: Column widths have changed (longtable) in table 47.223 on input line 629. [502] Package longtable Warning: Column widths have changed (longtable) in table 47.224 on input line 670. ) (./namespacemom__barotropic.tex [503] [504] [505] [506] Overfull \vbox (56.21756pt too high) has occurred while \output is active [507] [508] [509] [510] Underfull \vbox (badness 10000) has occurred while \output is active [511] Underfull \vbox (badness 10000) has occurred while \output is active [512] [513] Package longtable Warning: Column widths have changed (longtable) in table 47.228 on input line 649. [514] Underfull \vbox (badness 10000) has occurred while \output is active [515] [516] Underfull \vbox (badness 10000) has occurred while \output is active [517] Underfull \vbox (badness 10000) has occurred while \output is active [518] Underfull \vbox (badness 10000) has occurred while \output is active [519] Underfull \vbox (badness 10000) has occurred while \output is active [520] Underfull \vbox (badness 10000) has occurred while \output is active [521] Underfull \vbox (badness 10000) has occurred while \output is active [522] Underfull \vbox (badness 10000) has occurred while \output is active [523] [524] [525] Package longtable Warning: Column widths have changed (longtable) in table 47.231 on input line 1541. [526] [527] Underfull \vbox (badness 10000) has occurred while \output is active [528] Underfull \vbox (badness 10000) has occurred while \output is active [529] Underfull \vbox (badness 10000) has occurred while \output is active [530] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] [531] [532] [533] Underfull \vbox (badness 10000) has occurred while \output is active [534] Underfull \vbox (badness 10000) has occurred while \output is active [535] Underfull \vbox (badness 10000) has occurred while \output is active [536] Underfull \vbox (badness 10000) has occurred while \output is active [537] Underfull \vbox (badness 10000) has occurred while \output is active [538] Underfull \vbox (badness 10000) has occurred while \output is active [539] Underfull \vbox (badness 10000) has occurred while \output is active [540] Underfull \vbox (badness 10000) has occurred while \output is active [541] Underfull \vbox (badness 10000) has occurred while \output is active [542] Underfull \vbox (badness 10000) has occurred while \output is active [543] Underfull \vbox (badness 10000) has occurred while \output is active [544] Underfull \vbox (badness 10000) has occurred while \output is active [545] Underfull \vbox (badness 10000) has occurred while \output is active [546] Underfull \vbox (badness 10000) has occurred while \output is active [547] Underfull \vbox (badness 10000) has occurred while \output is active [548] Underfull \vbox (badness 10000) has occurred while \output is active [549] Underfull \vbox (badness 10000) has occurred while \output is active [550] Underfull \vbox (badness 10000) has occurred while \output is active [551] Underfull \vbox (badness 10000) has occurred while \output is active [552] Underfull \vbox (badness 10000) has occurred while \output is active [553] Underfull \vbox (badness 10000) has occurred while \output is active [554] Underfull \vbox (badness 10000) has occurred while \output is active [555] Underfull \vbox (badness 10000) has occurred while \output is active [556] Underfull \vbox (badness 10000) has occurred while \output is active [557] Underfull \vbox (badness 10000) has occurred while \output is active [558] Underfull \vbox (badness 10000) has occurred while \output is active [559] Underfull \vbox (badness 10000) has occurred while \output is active [560] [561] Package longtable Warning: Column widths have changed (longtable) in table 47.234 on input line 4300. Package longtable Warning: Column widths have changed (longtable) in table 47.235 on input line 4342. Underfull \hbox (badness 10000) detected at line 4343 [][][] [562] Package longtable Warning: Column widths have changed (longtable) in table 47.236 on input line 4389. Underfull \hbox (badness 10000) detected at line 4390 [][][] [563] [564] [565] Package longtable Warning: Column widths have changed (longtable) in table 47.238 on input line 4568. Underfull \hbox (badness 10000) detected at line 4569 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.239 on input line 4617. [566] Underfull \hbox (badness 10000) detected at line 4618 [][][] [567] [568] [569] Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]u[]_[]type[][]), dimension( ms %isdw-1[]: ms %iedw, ms %jsdw[]: ms %jedw), Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]v[]_[]type[][]), dimension( ms %isdw[]: ms %iedw, ms %jsdw-1[]: ms %jedw), [570] [571] Underfull \vbox (badness 10000) has occurred while \output is active [572] Underfull \hbox (badness 10000) in paragraph at lines 5077--5078 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]v[]_[]type[][]), dimension( sziw[]_[](ms),szjbw[]_[](ms)), intent(in) \T1/pcr/m/sl/8 B[]T[]C[]L[]_[]v \T1/p cr/m/n/8 ) [573] [574] Underfull \vbox (badness 10000) has occurred while \output is active [575] Underfull \vbox (badness 10000) has occurred while \output is active [576] Package longtable Warning: Column widths have changed (longtable) in table 47.244 on input line 5344. Package longtable Warning: Column widths have changed (longtable) in table 47.245 on input line 5374. [577] Underfull \hbox (badness 10000) detected at line 5375 [][][] [578] Package longtable Warning: Column widths have changed (longtable) in table 47.246 on input line 5506. Underfull \hbox (badness 10000) detected at line 5507 [][][] [579] Underfull \vbox (badness 10000) has occurred while \output is active [580]) (./namespacemom__bkgnd__mixing.tex [581] Overfull \vbox (4.83084pt too high) has occurred while \output is active [582] [583] Underfull \vbox (badness 10000) has occurred while \output is active [584] [585] [586] Underfull \vbox (badness 10000) has occurred while \output is active [587] [588] Package longtable Warning: Column widths have changed (longtable) in table 47.250 on input line 561. ) (./namespacemom__boundary__update.tex [589] [590] [591] Package longtable Warning: Column widths have changed (longtable) in table 47.254 on input line 168. [592]) (./namespacemom__bulk__mixed__layer.tex [593] [594] [595] [596] Underfull \vbox (badness 10000) has occurred while \output is active [597] Underfull \vbox (badness 10000) has occurred while \output is active [598] Underfull \vbox (badness 10000) has occurred while \output is active [599] Underfull \vbox (badness 10000) has occurred while \output is active [600] Underfull \vbox (badness 10000) has occurred while \output is active [601] Underfull \vbox (badness 10000) has occurred while \output is active [602] Underfull \vbox (badness 10000) has occurred while \output is active [603] [604] Underfull \vbox (badness 10000) has occurred while \output is active [605] Underfull \vbox (badness 10000) has occurred while \output is active [606] Underfull \vbox (badness 10000) has occurred while \output is active [607] [608] Package longtable Warning: Column widths have changed (longtable) in table 47.257 on input line 1122. [609] Underfull \vbox (badness 10000) has occurred while \output is active [610] Package longtable Warning: Column widths have changed (longtable) in table 47.258 on input line 1277. Underfull \hbox (badness 10000) detected at line 1278 [][][] [611] [612] [613] Underfull \vbox (badness 10000) has occurred while \output is active [614] [615] [616] [617] Underfull \vbox (badness 10000) has occurred while \output is active [618] Underfull \vbox (badness 10000) has occurred while \output is active [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] Underfull \vbox (badness 10000) has occurred while \output is active [624] Underfull \vbox (badness 10000) has occurred while \output is active [625] Underfull \vbox (badness 10000) has occurred while \output is active [626] Underfull \vbox (badness 10000) has occurred while \output is active [627] [628] [629] Underfull \vbox (badness 10000) has occurred while \output is active [630] Underfull \vbox (badness 10000) has occurred while \output is active [631] Underfull \vbox (badness 10000) has occurred while \output is active [632] [633] [634] Underfull \vbox (badness 10000) has occurred while \output is active [635] Underfull \vbox (badness 10000) has occurred while \output is active [636] Underfull \vbox (badness 10000) has occurred while \output is active [637] Underfull \vbox (badness 10000) has occurred while \output is active [638] Underfull \vbox (badness 10000) has occurred while \output is active [639] Underfull \vbox (badness 10000) has occurred while \output is active [640] Underfull \vbox (badness 10000) has occurred while \output is active [641] Underfull \vbox (badness 10000) has occurred while \output is active [642] Underfull \vbox (badness 10000) has occurred while \output is active [643] Underfull \vbox (badness 10000) has occurred while \output is active [644] [645] Package longtable Warning: Column widths have changed (longtable) in table 47.264 on input line 3766. [646] Underfull \vbox (badness 10000) has occurred while \output is active [647] Underfull \vbox (badness 10000) has occurred while \output is active [648] Underfull \vbox (badness 10000) has occurred while \output is active [649] Package longtable Warning: Column widths have changed (longtable) in table 47.265 on input line 4118. [650]) (./namespacemom__checksum__packages.tex [651] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 u[] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 v[] [652] [653] [654] [655] Underfull \vbox (badness 10000) has occurred while \output is active [656] [657] [658] [659]) (./namespacemom__checksums.tex [660] [661] [662] Package longtable Warning: Column widths have changed (longtable) in table 47.273 on input line 169. [663] Package longtable Warning: Column widths have changed (longtable) in table 47.274 on input line 206. [664] Package longtable Warning: Column widths have changed (longtable) in table 47.275 on input line 246. Package longtable Warning: Column widths have changed (longtable) in table 47.276 on input line 294. Underfull \vbox (badness 10000) has occurred while \output is active [665] Package longtable Warning: Column widths have changed (longtable) in table 47.277 on input line 341. [666] Package longtable Warning: Column widths have changed (longtable) in table 47.278 on input line 382. Package longtable Warning: Column widths have changed (longtable) in table 47.279 on input line 420. Overfull \vbox (6.56526pt too high) has occurred while \output is active [667] Package longtable Warning: Column widths have changed (longtable) in table 47.280 on input line 456. [668] [669] [670] Overfull \vbox (36.94623pt too high) has occurred while \output is active [671] [672] Underfull \vbox (badness 10000) has occurred while \output is active [673] [674] Underfull \vbox (badness 10000) has occurred while \output is active [675] [676] [677] Underfull \vbox (badness 10000) has occurred while \output is active [678] [679] [680] Underfull \vbox (badness 10000) has occurred while \output is active [681] [682] [683] [684] [685] [686] [687] [688] Underfull \vbox (badness 10000) has occurred while \output is active [689] [690] Underfull \vbox (badness 10000) has occurred while \output is active [691] Underfull \vbox (badness 10000) has occurred while \output is active [692] [693] [694] [695] [696] Underfull \vbox (badness 10000) has occurred while \output is active [697] [698] [699] Underfull \vbox (badness 10000) has occurred while \output is active [700] [701] [702] [703] Package longtable Warning: Column widths have changed (longtable) in table 47.304 on input line 3038. [704]) (./namespacemom__coms.tex [705] [706] [707] [708] Package longtable Warning: Column widths have changed (longtable) in table 47.306 on input line 167. Package longtable Warning: Column widths have changed (longtable) in table 47.307 on input line 201. [709] Underfull \hbox (badness 10000) detected at line 265 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.308 on input line 274. [710] Underfull \hbox (badness 10000) detected at line 301 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.309 on input line 310. Package longtable Warning: Column widths have changed (longtable) in table 47.310 on input line 341. Underfull \hbox (badness 10000) detected at line 342 [][][] [711] Package longtable Warning: Column widths have changed (longtable) in table 47.311 on input line 376. Package longtable Warning: Column widths have changed (longtable) in table 47.312 on input line 405. [712] [713] [714] Package longtable Warning: Column widths have changed (longtable) in table 47.315 on input line 578. Package longtable Warning: Column widths have changed (longtable) in table 47.316 on input line 610. Overfull \vbox (6.82013pt too high) has occurred while \output is active [715] [716] Package longtable Warning: Column widths have changed (longtable) in table 47.318 on input line 714. [717] Underfull \hbox (badness 10000) detected at line 788 [][][] [718] Underfull \vbox (badness 10000) has occurred while \output is active [719] [720] Underfull \hbox (badness 10000) detected at line 950 [][][] [721] [722] Underfull \hbox (badness 10000) detected at line 1090 [][][] [723] Underfull \vbox (badness 10000) has occurred while \output is active [724]) (./namespacemom__constants.tex) (./namespacemom__continuity.tex [725] Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [726] Overfull \vbox (5.65964pt too high) has occurred while \output is active [727] [728] [729] Underfull \hbox (badness 10000) detected at line 277 [][][] ) (./namespacemom__continuity__ppm.tex [730] [731] Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [732] [733] Underfull \vbox (badness 10000) has occurred while \output is active [734] [735] [736] [737] Underfull \hbox (badness 10000) detected at line 426 [][][] [738] [739] [740] [741] [742] [743] [744] Underfull \vbox (badness 10000) has occurred while \output is active [745] Underfull \hbox (badness 10000) in paragraph at lines 950--951 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional [746] [747] Underfull \vbox (badness 10000) has occurred while \output is active [748] Underfull \vbox (badness 10000) has occurred while \output is active [749] Underfull \vbox (badness 10000) has occurred while \output is active [750] Package longtable Warning: Column widths have changed (longtable) in table 47.334 on input line 1324. [751] [752] Package longtable Warning: Column widths have changed (longtable) in table 47.335 on input line 1395. [753] [754] Underfull \vbox (badness 10000) has occurred while \output is active [755] Underfull \vbox (badness 10000) has occurred while \output is active [756] [757] [758] Package longtable Warning: Column widths have changed (longtable) in table 47.338 on input line 1803. Underfull \hbox (badness 10000) detected at line 1804 [][][] [759] [760] Underfull \vbox (badness 10000) has occurred while \output is active [761] [762] [763] Underfull \vbox (badness 10000) has occurred while \output is active [764] Underfull \hbox (badness 10000) in paragraph at lines 2258--2259 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional [765] [766] Underfull \hbox (badness 10000) in paragraph at lines 2406--2407 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), optional [767] [768] [769] Underfull \vbox (badness 10000) has occurred while \output is active [770] [771] [772] Underfull \hbox (badness 10000) in paragraph at lines 2756--2757 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional [773] [774] Underfull \vbox (badness 10000) has occurred while \output is active [775] Underfull \vbox (badness 10000) has occurred while \output is active [776] Underfull \vbox (badness 10000) has occurred while \output is active [777]) (./namespacemom__controlled__forcing.tex [778] Overfull \vbox (29.87068pt too high) has occurred while \output is active [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] Underfull \vbox (badness 10000) has occurred while \output is active [782] [783] [784] [785] Underfull \hbox (badness 10000) detected at line 537 [][][] Underfull \hbox (badness 10000) detected at line 574 [][][] [786] [787]) (./namespacemom__coord__initialization.tex [788] [789] [790] [791] [792] [793] [794] [795] Overfull \vbox (43.5485pt too high) has occurred while \output is active [796] [797] [798] Underfull \vbox (badness 10000) has occurred while \output is active [799]) (./namespacemom__coriolisadv.tex [800] [801] [802] Package longtable Warning: Column widths have changed (longtable) in table 47.361 on input line 155. [803] Underfull \vbox (badness 10000) has occurred while \output is active [804] Underfull \vbox (badness 10000) has occurred while \output is active [805] Underfull \vbox (badness 10000) has occurred while \output is active [806] Underfull \vbox (badness 10000) has occurred while \output is active [807] Underfull \vbox (badness 10000) has occurred while \output is active [808] Underfull \vbox (badness 10000) has occurred while \output is active [809] Underfull \vbox (badness 10000) has occurred while \output is active [810] Underfull \vbox (badness 10000) has occurred while \output is active [811] Underfull \vbox (badness 10000) has occurred while \output is active [812] [813] [814] Underfull \vbox (badness 10000) has occurred while \output is active [815] Underfull \vbox (badness 10000) has occurred while \output is active [816] Package longtable Warning: Column widths have changed (longtable) in table 47.364 on input line 1299. Overfull \vbox (28.26488pt too high) has occurred while \output is active [817] [818]) (./namespacemom__cpu__clock.tex Underfull \hbox (badness 10000) detected at line 33 [][][] [819]) (./namespacemom__cvmix__conv.tex [820] Package longtable Warning: Column widths have changed (longtable) in table 47.366 on input line 57. [821] [822] [823] Underfull \vbox (badness 10000) has occurred while \output is active [824]) (./namespacemom__cvmix__ddiff.tex [825] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional Package longtable Warning: Column widths have changed (longtable) in table 47.370 on input line 63. Overfull \vbox (77.46162pt too high) has occurred while \output is active [826] [827] Underfull \vbox (badness 10000) has occurred while \output is active [828] [829] [830] [831]) (./namespacemom__cvmix__kpp.tex [832] [833] [834] Underfull \vbox (badness 10000) has occurred while \output is active [835] Underfull \vbox (badness 10000) has occurred while \output is active [836] Underfull \vbox (badness 10000) has occurred while \output is active [837] [838] Package longtable Warning: Column widths have changed (longtable) in table 47.375 on input line 492. [839] Underfull \vbox (badness 10000) has occurred while \output is active [840] Underfull \vbox (badness 10000) has occurred while \output is active [841] Underfull \vbox (badness 10000) has occurred while \output is active [842] Underfull \vbox (badness 10000) has occurred while \output is active [843] [844] [845] [846] Underfull \vbox (badness 10000) has occurred while \output is active [847] Underfull \vbox (badness 10000) has occurred while \output is active [848] Underfull \vbox (badness 10000) has occurred while \output is active [849] Underfull \vbox (badness 10000) has occurred while \output is active [850] Underfull \hbox (badness 10000) in paragraph at lines 1420--1421 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] Overfull \vbox (40.83766pt too high) has occurred while \output is active [851] Underfull \hbox (badness 10000) in paragraph at lines 1515--1516 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] [852] [853] Package longtable Warning: Column widths have changed (longtable) in table 47.381 on input line 1629. [854]) (./namespacemom__cvmix__shear.tex [855] Package longtable Warning: Column widths have changed (longtable) in table 47.382 on input line 63. Overfull \vbox (65.14655pt too high) has occurred while \output is active [856] [857] [858] Underfull \hbox (badness 10000) detected at line 254 [][][] Underfull \vbox (badness 10000) has occurred while \output is active [859] [860]) (./namespacemom__debugging.tex [861] [862] [863] Overfull \vbox (14.49733pt too high) has occurred while \output is active [864] [865] Package longtable Warning: Column widths have changed (longtable) in table 47.388 on input line 252. [866] Package longtable Warning: Column widths have changed (longtable) in table 47.389 on input line 340. [867] Package longtable Warning: Column widths have changed (longtable) in table 47.390 on input line 395. [868] Package longtable Warning: Column widths have changed (longtable) in table 47.391 on input line 469. [869] [870] Overfull \vbox (0.46025pt too high) has occurred while \output is active [871] Underfull \vbox (badness 10000) has occurred while \output is active [872] [873] [874] [875] Underfull \vbox (badness 10000) has occurred while \output is active [876] Package longtable Warning: Column widths have changed (longtable) in table 47.398 on input line 1026. [877] Package longtable Warning: Column widths have changed (longtable) in table 47.399 on input line 1081. [878] [879] Package longtable Warning: Column widths have changed (longtable) in table 47.401 on input line 1191. [880] Package longtable Warning: Column widths have changed (longtable) in table 47.402 on input line 1246. [881] Package longtable Warning: Column widths have changed (longtable) in table 47.403 on input line 1300. [882] Package longtable Warning: Column widths have changed (longtable) in table 47.405 on input line 1392. Underfull \hbox (badness 10000) detected at line 1393 [][][] [883]) (./namespacemom__density__integrals.tex [884] [885] Package longtable Warning: Column widths have changed (longtable) in table 47.407 on input line 72. [886] [887] Package longtable Warning: Column widths have changed (longtable) in table 47.408 on input line 191. [888] [889] Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [890] [891] Underfull \vbox (badness 10000) has occurred while \output is active [892] Underfull \vbox (badness 10000) has occurred while \output is active [893] [894] [895] Underfull \vbox (badness 10000) has occurred while \output is active [896] Underfull \vbox (badness 10000) has occurred while \output is active [897] Underfull \vbox (badness 10000) has occurred while \output is active [898] Underfull \vbox (badness 10000) has occurred while \output is active [899] Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [900] [901] Underfull \vbox (badness 10000) has occurred while \output is active [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] Underfull \vbox (badness 10000) has occurred while \output is active [904] Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [905] [906] Underfull \vbox (badness 10000) has occurred while \output is active [907] Underfull \vbox (badness 10000) has occurred while \output is active [908] Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [909] [910] Underfull \vbox (badness 10000) has occurred while \output is active [911] Underfull \vbox (badness 10000) has occurred while \output is active [912] [913] [914]) (./namespacemom__diabatic__aux.tex [915] [916] Package longtable Warning: Column widths have changed (longtable) in table 47.416 on input line 80. [917] [918] [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] Underfull \vbox (badness 10000) has occurred while \output is active [921] Underfull \vbox (badness 10000) has occurred while \output is active [922] Underfull \vbox (badness 10000) has occurred while \output is active [923] Underfull \vbox (badness 10000) has occurred while \output is active [924] Underfull \vbox (badness 10000) has occurred while \output is active [925] [926] [927] Underfull \vbox (badness 10000) has occurred while \output is active [928] Overfull \vbox (26.02458pt too high) has occurred while \output is active [929] [930] [931] [932] Underfull \vbox (badness 10000) has occurred while \output is active [933] [934] Package longtable Warning: Column widths have changed (longtable) in table 47.422 on input line 1405. [935] [936] Package longtable Warning: Column widths have changed (longtable) in table 47.423 on input line 1542. [937] [938] Package longtable Warning: Column widths have changed (longtable) in table 47.424 on input line 1676. [939] [940] [941] Package longtable Warning: Column widths have changed (longtable) in table 47.426 on input line 1927. [942]) (./namespacemom__diabatic__driver.tex [943] [944] [945] Package longtable Warning: Column widths have changed (longtable) in table 47.427 on input line 120. Overfull \vbox (14.49553pt too high) has occurred while \output is active [946] [947] [948] Underfull \vbox (badness 10000) has occurred while \output is active [949] [950] [951] Underfull \vbox (badness 10000) has occurred while \output is active [952] Underfull \vbox (badness 10000) has occurred while \output is active [953] Underfull \vbox (badness 10000) has occurred while \output is active [954] Underfull \vbox (badness 10000) has occurred while \output is active [955] Underfull \vbox (badness 10000) has occurred while \output is active [956] Underfull \vbox (badness 10000) has occurred while \output is active [957] Underfull \vbox (badness 10000) has occurred while \output is active [958] Underfull \vbox (badness 10000) has occurred while \output is active [959] [960] [961] Underfull \vbox (badness 10000) has occurred while \output is active [962] Underfull \vbox (badness 10000) has occurred while \output is active [963] Underfull \vbox (badness 10000) has occurred while \output is active [964] Underfull \vbox (badness 10000) has occurred while \output is active [965] Underfull \vbox (badness 10000) has occurred while \output is active [966] Underfull \vbox (badness 10000) has occurred while \output is active [967] Underfull \vbox (badness 10000) has occurred while \output is active [968] Underfull \vbox (badness 10000) has occurred while \output is active [969] [970] [971] [972] Underfull \vbox (badness 10000) has occurred while \output is active [973] Underfull \vbox (badness 10000) has occurred while \output is active [974] Underfull \vbox (badness 10000) has occurred while \output is active [975] Underfull \vbox (badness 10000) has occurred while \output is active [976] Underfull \vbox (badness 10000) has occurred while \output is active [977] Underfull \vbox (badness 10000) has occurred while \output is active [978] [979] [980] [981] [982] Overfull \vbox (4.22563pt too high) has occurred while \output is active [983] [984] [985] [986] Underfull \vbox (badness 10000) has occurred while \output is active [987] Underfull \vbox (badness 10000) has occurred while \output is active [988] Underfull \vbox (badness 10000) has occurred while \output is active [989] Underfull \vbox (badness 10000) has occurred while \output is active [990] Underfull \vbox (badness 10000) has occurred while \output is active [991] Underfull \vbox (badness 10000) has occurred while \output is active [992] Underfull \vbox (badness 10000) has occurred while \output is active [993] Underfull \vbox (badness 10000) has occurred while \output is active [994] Underfull \vbox (badness 10000) has occurred while \output is active [995] Underfull \vbox (badness 10000) has occurred while \output is active [996] Underfull \vbox (badness 10000) has occurred while \output is active [997]) (./namespacemom__diag__manager__wrapper.tex [998] Underfull \hbox (badness 2626) in paragraph at lines 18--19 []\T1/phv/m/n/10 integer func-tion [][]register[]_[]diag[]_[]field[]_[]scalar[] _[]fms[][] (module[]_[]name, field[]_[]name, init[]_[]time, long[]_[]name, unit s, [999] [1000] [1001]) (./namespacemom__diag__mediator.tex [1002] [1003] [1004] [1005] [1006] [1007] [1008] Package longtable Warning: Column widths have changed (longtable) in table 47.443 on input line 387. [1009] [1010] Underfull \vbox (badness 10000) has occurred while \output is active [1011] [1012] [1013] [1014] [1015] Underfull \vbox (badness 10000) has occurred while \output is active [1016] [1017] [1018] [1019] Package longtable Warning: Column widths have changed (longtable) in table 47.451 on input line 1097. [1020] Package longtable Warning: Column widths have changed (longtable) in table 47.454 on input line 1214. Overfull \vbox (19.73378pt too high) has occurred while \output is active [1021] Package longtable Warning: Column widths have changed (longtable) in table 47.455 on input line 1271. [1022] [1023] Package longtable Warning: Column widths have changed (longtable) in table 47.457 on input line 1375. Underfull \vbox (badness 10000) has occurred while \output is active [1024] [1025] Underfull \vbox (badness 10000) has occurred while \output is active [1026] Underfull \vbox (badness 10000) has occurred while \output is active [1027] Package longtable Warning: Column widths have changed (longtable) in table 47.460 on input line 1692. [1028] Package longtable Warning: Column widths have changed (longtable) in table 47.461 on input line 1727. [1029] Underfull \hbox (badness 10000) detected at line 1799 [][][] [1030] [1031] Package longtable Warning: Column widths have changed (longtable) in table 47.464 on input line 1922. Underfull \vbox (badness 10000) has occurred while \output is active [1032] [1033] [1034] Package longtable Warning: Column widths have changed (longtable) in table 47.467 on input line 2113. [1035] Package longtable Warning: Column widths have changed (longtable) in table 47.468 on input line 2209. [1036] [1037] [1038] Underfull \vbox (badness 10000) has occurred while \output is active [1039] [1040] Overfull \hbox (36.1684pt too wide) in paragraph at lines 2562--2562 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [1041] Underfull \vbox (badness 10000) has occurred while \output is active [1042] [1043] [1044] [1045] [1046] Package longtable Warning: Column widths have changed (longtable) in table 47.475 on input line 2932. Package longtable Warning: Column widths have changed (longtable) in table 47.476 on input line 2960. [1047] Package longtable Warning: Column widths have changed (longtable) in table 47.477 on input line 3011. Underfull \hbox (badness 10000) detected at line 3012 [][][] [1048] Package longtable Warning: Column widths have changed (longtable) in table 47.478 on input line 3054. Overfull \vbox (7.75447pt too high) has occurred while \output is active [1049] [1050] Underfull \hbox (badness 10000) detected at line 3181 [][][] [1051] [1052] [1053] [1054] [1055] Package longtable Warning: Column widths have changed (longtable) in table 47.485 on input line 3518. [1056] Underfull \vbox (badness 10000) has occurred while \output is active [1057] [1058] Underfull \vbox (badness 10000) has occurred while \output is active [1059] Package longtable Warning: Column widths have changed (longtable) in table 47.487 on input line 3839. [1060] Underfull \vbox (badness 10000) has occurred while \output is active [1061] Package longtable Warning: Column widths have changed (longtable) in table 47.488 on input line 4034. Overfull \vbox (24.95552pt too high) has occurred while \output is active [1062] Overfull \vbox (24.2831pt too high) has occurred while \output is active [1063] Package longtable Warning: Column widths have changed (longtable) in table 47.490 on input line 4144. [1064] [1065] [1066] Underfull \vbox (badness 10000) has occurred while \output is active [1067] Underfull \vbox (badness 10000) has occurred while \output is active [1068] Overfull \vbox (10.18648pt too high) has occurred while \output is active [1069] [1070] [1071] [1072] Underfull \vbox (badness 10000) has occurred while \output is active [1073] [1074] Underfull \hbox (badness 10000) detected at line 4862 [][][] [1075] Underfull \vbox (badness 10000) has occurred while \output is active [1076] Underfull \hbox (badness 10000) detected at line 5014 [][][] [1077] [1078] Underfull \vbox (badness 10000) has occurred while \output is active [1079] [1080] Underfull \vbox (badness 10000) has occurred while \output is active [1081] Underfull \vbox (badness 10000) has occurred while \output is active [1082] [1083] [1084] Underfull \vbox (badness 10000) has occurred while \output is active [1085] Package longtable Warning: Column widths have changed (longtable) in table 47.498 on input line 5707. [1086] Package longtable Warning: Column widths have changed (longtable) in table 47.499 on input line 5739. [1087] Package longtable Warning: Column widths have changed (longtable) in table 47.500 on input line 5854. [1088]) (./namespacemom__diag__remap.tex [1089] [1090] Overfull \vbox (15.70502pt too high) has occurred while \output is active [1091] Underfull \vbox (badness 10000) has occurred while \output is active [1092] [1093] [1094] Underfull \vbox (badness 10000) has occurred while \output is active [1095] Overfull \vbox (2.68217pt too high) has occurred while \output is active [1096] [1097] Underfull \hbox (badness 10000) detected at line 533 [][][] Overfull \vbox (57.59293pt too high) has occurred while \output is active [1098] [1099] [1100] Underfull \vbox (badness 10000) has occurred while \output is active [1101] Overfull \vbox (13.8649pt too high) has occurred while \output is active [1102] [1103] [1104]) (./namespacemom__diag__vkernels.tex [1105] Package longtable Warning: Column widths have changed (longtable) in table 47.514 on input line 36. [1106] [1107] [1108] [1109] [1110] [1111] [1112]) (./namespacemom__diagnostics.tex [1113] Package longtable Warning: Column widths have changed (longtable) in table 47.519 on input line 69. [1114] [1115] [1116] Underfull \vbox (badness 10000) has occurred while \output is active [1117] Underfull \vbox (badness 10000) has occurred while \output is active [1118] Underfull \vbox (badness 10000) has occurred while \output is active [1119] Underfull \vbox (badness 10000) has occurred while \output is active [1120] Underfull \vbox (badness 10000) has occurred while \output is active [1121] Underfull \vbox (badness 10000) has occurred while \output is active [1122] Package longtable Warning: Column widths have changed (longtable) in table 47.521 on input line 756. Underfull \vbox (badness 10000) has occurred while \output is active [1123] [1124] Underfull \vbox (badness 10000) has occurred while \output is active [1125] Package longtable Warning: Column widths have changed (longtable) in table 47.522 on input line 992. [1126] [1127] [1128] Package longtable Warning: Column widths have changed (longtable) in table 47.523 on input line 1137. [1129] Package longtable Warning: Column widths have changed (longtable) in table 47.524 on input line 1222. [1130] [1131] Underfull \vbox (badness 10000) has occurred while \output is active [1132] Underfull \vbox (badness 10000) has occurred while \output is active [1133] Underfull \vbox (badness 10000) has occurred while \output is active [1134] Underfull \vbox (badness 10000) has occurred while \output is active [1135] [1136] Overfull \vbox (29.00815pt too high) has occurred while \output is active [1137] [1138] [1139] [1140] Package longtable Warning: Column widths have changed (longtable) in table 47.529 on input line 2085. [1141] [1142] [1143] Package longtable Warning: Column widths have changed (longtable) in table 47.531 on input line 2254. [1144] Package longtable Warning: Column widths have changed (longtable) in table 47.532 on input line 2331. [1145] Package longtable Warning: Column widths have changed (longtable) in table 47.533 on input line 2416. [1146] Underfull \vbox (badness 10000) has occurred while \output is active [1147] Underfull \vbox (badness 10000) has occurred while \output is active [1148]) (./namespacemom__diapyc__energy__req.tex [1149] [1150] Underfull \vbox (badness 10000) has occurred while \output is active [1151] Underfull \vbox (badness 10000) has occurred while \output is active [1152] Underfull \vbox (badness 10000) has occurred while \output is active [1153] Underfull \vbox (badness 10000) has occurred while \output is active [1154] Underfull \vbox (badness 10000) has occurred while \output is active [1155] Underfull \vbox (badness 10000) has occurred while \output is active [1156] Underfull \vbox (badness 10000) has occurred while \output is active [1157] Underfull \vbox (badness 10000) has occurred while \output is active [1158] Underfull \vbox (badness 10000) has occurred while \output is active [1159] Underfull \vbox (badness 10000) has occurred while \output is active [1160] [1161] [1162] Package longtable Warning: Column widths have changed (longtable) in table 47.537 on input line 1084. [1163] [1164] [1165] [1166] Underfull \vbox (badness 10000) has occurred while \output is active [1167] [1168] Underfull \vbox (badness 10000) has occurred while \output is active [1169] [1170]) (./namespacemom__document.tex [1171] [1172] [1173] Underfull \vbox (badness 10000) has occurred while \output is active [1174] [1175] [1176] [1177] [1178] Overfull \vbox (57.30919pt too high) has occurred while \output is active [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] [1187] [1188] [1189] Package longtable Warning: Column widths have changed (longtable) in table 47.557 on input line 1154. Package longtable Warning: Column widths have changed (longtable) in table 47.558 on input line 1181. [1190] [1191] [1192] Underfull \hbox (badness 10000) detected at line 1389 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.561 on input line 1398. [1193] Package longtable Warning: Column widths have changed (longtable) in table 47.562 on input line 1458. [1194] Package longtable Warning: Column widths have changed (longtable) in table 47.563 on input line 1530. [1195] Package longtable Warning: Column widths have changed (longtable) in table 47.564 on input line 1564. [1196] [1197] Underfull \vbox (badness 10000) has occurred while \output is active [1198]) (./namespacemom__domains.tex [1199] [1200] [1201] [1202] [1203] Underfull \vbox (badness 10000) has occurred while \output is active [1204] [1205] [1206] Overfull \vbox (1.22655pt too high) has occurred while \output is active [1207] [1208] [1209] [1210] [1211] [1212] [1213] [1214] [1215] Package longtable Warning: Column widths have changed (longtable) in table 47.577 on input line 1021. [1216] Package longtable Warning: Column widths have changed (longtable) in table 47.578 on input line 1070. [1217] [1218] [1219] [1220] Underfull \vbox (badness 10000) has occurred while \output is active [1221] Underfull \vbox (badness 10000) has occurred while \output is active [1222] Underfull \vbox (badness 10000) has occurred while \output is active [1223] Underfull \vbox (badness 10000) has occurred while \output is active [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] Underfull \hbox (badness 10000) detected at line 2078 [][][] [1232] Underfull \hbox (badness 10000) detected at line 2155 [][][] [1233] [1234] [1235] [1236] [1237] [1238] [1239] Underfull \hbox (badness 10000) detected at line 2578 [][][] [1240] [1241] Underfull \hbox (badness 10000) detected at line 2668 [][][] [1242]) (./namespacemom__dyn__horgrid.tex [1243] Package longtable Warning: Column widths have changed (longtable) in table 47.595 on input line 41. Underfull \hbox (badness 10000) detected at line 42 [][][] [1244] [1245] [1246] [1247] Package longtable Warning: Column widths have changed (longtable) in table 47.599 on input line 320. [1248]) (./namespacemom__dynamics__split__rk2.tex [1249] Underfull \vbox (badness 10000) has occurred while \output is active [1250] Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), target Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(inout), target [1251] [1252] [1253] Underfull \vbox (badness 10000) has occurred while \output is active [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] Underfull \vbox (badness 10000) has occurred while \output is active [1257] Underfull \vbox (badness 10000) has occurred while \output is active [1258] [1259] [1260] [1261] Underfull \vbox (badness 10000) has occurred while \output is active [1262] Underfull \vbox (badness 10000) has occurred while \output is active [1263] Underfull \vbox (badness 10000) has occurred while \output is active [1264] Underfull \vbox (badness 10000) has occurred while \output is active [1265] Underfull \vbox (badness 10000) has occurred while \output is active [1266] Underfull \vbox (badness 10000) has occurred while \output is active [1267] Underfull \vbox (badness 10000) has occurred while \output is active [1268] Underfull \vbox (badness 10000) has occurred while \output is active [1269]) (./namespacemom__dynamics__unsplit.tex [1270] [1271] [1272] [1273] Underfull \vbox (badness 10000) has occurred while \output is active [1274] [1275] [1276] [1277] [1278] Underfull \vbox (badness 10000) has occurred while \output is active [1279] Underfull \vbox (badness 10000) has occurred while \output is active [1280] Underfull \vbox (badness 10000) has occurred while \output is active [1281]) (./namespacemom__dynamics__unsplit__rk2.tex [1282] [1283] [1284] [1285] Underfull \vbox (badness 10000) has occurred while \output is active [1286] Overfull \vbox (34.51509pt too high) has occurred while \output is active [1287] [1288] [1289] Underfull \vbox (badness 10000) has occurred while \output is active [1290] Underfull \vbox (badness 10000) has occurred while \output is active [1291] Underfull \vbox (badness 10000) has occurred while \output is active [1292]) (./namespaceMOM__energetic__PBL.tex) (./namespacemom__energetic__pbl.tex [1293] [1294] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] [1295] [1296] Underfull \vbox (badness 10000) has occurred while \output is active [1297] Underfull \vbox (badness 10000) has occurred while \output is active [1298] Underfull \vbox (badness 10000) has occurred while \output is active [1299] [1300] [1301] [1302] Underfull \vbox (badness 10000) has occurred while \output is active [1303] Underfull \vbox (badness 10000) has occurred while \output is active [1304] Underfull \vbox (badness 10000) has occurred while \output is active [1305] Underfull \vbox (badness 10000) has occurred while \output is active [1306] Underfull \vbox (badness 10000) has occurred while \output is active [1307] [1308] [1309] Underfull \vbox (badness 10000) has occurred while \output is active [1310] Underfull \vbox (badness 10000) has occurred while \output is active [1311] Underfull \vbox (badness 10000) has occurred while \output is active [1312] Underfull \vbox (badness 10000) has occurred while \output is active [1313] Underfull \vbox (badness 10000) has occurred while \output is active [1314] Underfull \vbox (badness 10000) has occurred while \output is active [1315] Underfull \vbox (badness 10000) has occurred while \output is active [1316] Underfull \vbox (badness 10000) has occurred while \output is active [1317] Underfull \vbox (badness 10000) has occurred while \output is active [1318] Underfull \vbox (badness 10000) has occurred while \output is active [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] Underfull \vbox (badness 10000) has occurred while \output is active [1322] [1323] [1324] Underfull \vbox (badness 10000) has occurred while \output is active [1325] [1326] [1327] [1328] Underfull \vbox (badness 10000) has occurred while \output is active [1329] [1330] [1331] [1332] [1333]) (./namespacemom__entrain__diffusive.tex [1334] [1335] Underfull \vbox (badness 10000) has occurred while \output is active [1336] [1337] Underfull \vbox (badness 10000) has occurred while \output is active [1338] [1339] [1340] [1341] Underfull \vbox (badness 10000) has occurred while \output is active [1342] [1343] [1344] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 integer, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), inten t(inout), optional \T1/pcr/m/sl/8 kb[]_[] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 Kd[]_[][] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in), optional [1345] Package longtable Warning: Column widths have changed (longtable) in table 47.625 on input line 757. [1346] Underfull \vbox (badness 10000) has occurred while \output is active [1347] Underfull \vbox (badness 10000) has occurred while \output is active [1348] Underfull \vbox (badness 10000) has occurred while \output is active [1349] Underfull \vbox (badness 10000) has occurred while \output is active [1350] Underfull \vbox (badness 10000) has occurred while \output is active [1351] Underfull \vbox (badness 10000) has occurred while \output is active [1352] Underfull \vbox (badness 10000) has occurred while \output is active [1353] Underfull \vbox (badness 10000) has occurred while \output is active [1354] Underfull \vbox (badness 10000) has occurred while \output is active [1355] Underfull \vbox (badness 10000) has occurred while \output is active [1356] [1357] Underfull \vbox (badness 10000) has occurred while \output is active [1358] [1359] [1360] [1361] [1362] Underfull \vbox (badness 10000) has occurred while \output is active [1363] Underfull \vbox (badness 10000) has occurred while \output is active [1364] Underfull \vbox (badness 10000) has occurred while \output is active [1365] [1366] Package longtable Warning: Column widths have changed (longtable) in table 47.629 on input line 2328. [1367] Underfull \vbox (badness 10000) has occurred while \output is active [1368]) (./namespacemom__eos.tex [1369] [1370] [1371] [1372] Underfull \vbox (badness 10000) has occurred while \output is active [1373] [1374] [1375] [1376] [1377] [1378] [1379] Package longtable Warning: Column widths have changed (longtable) in table 47.635 on input line 662. Overfull \vbox (21.86925pt too high) has occurred while \output is active [1380] [1381] Overfull \vbox (45.78584pt too high) has occurred while \output is active [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] [1395] [1396] [1397] [1398] [1399] [1400] [1401] Package longtable Warning: Column widths have changed (longtable) in table 47.652 on input line 2067. [1402] [1403] Package longtable Warning: Column widths have changed (longtable) in table 47.654 on input line 2145. Underfull \hbox (badness 10000) detected at line 2146 [][][] [1404] [1405] [1406] [1407] [1408] Underfull \hbox (badness 10000) detected at line 2431 [][][] Overfull \vbox (47.24054pt too high) has occurred while \output is active [1409] Underfull \vbox (badness 10000) has occurred while \output is active [1410]) (./namespacemom__eos__linear.tex [1411] [1412] Overfull \vbox (1.44406pt too high) has occurred while \output is active [1413] Underfull \vbox (badness 10000) has occurred while \output is active [1414] Underfull \vbox (badness 10000) has occurred while \output is active [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] Underfull \vbox (badness 10000) has occurred while \output is active [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428]) (./namespacemom__eos__nemo.tex [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./namespacemom__eos__teos10.tex [1441] [1442] [1443] [1444] [1445] [1446] Overfull \vbox (69.66199pt too high) has occurred while \output is active [1447] Underfull \vbox (badness 10000) has occurred while \output is active [1448] [1449] [1450]) (./namespacemom__eos__unesco.tex [1451] [1452] [1453] [1454] [1455] [1456] [1457] Overfull \vbox (42.16423pt too high) has occurred while \output is active [1458] [1459] Overfull \vbox (6.26321pt too high) has occurred while \output is active [1460]) (./namespacemom__eos__wright.tex [1461] [1462] Overfull \vbox (34.43738pt too high) has occurred while \output is active [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] Underfull \vbox (badness 10000) has occurred while \output is active [1475] [1476] [1477] Underfull \vbox (badness 10000) has occurred while \output is active [1478] Underfull \vbox (badness 10000) has occurred while \output is active [1479]) (./namespacemom__error__handler.tex [1480] [1481] Package longtable Warning: Column widths have changed (longtable) in table 47.708 on input line 93. [1482] [1483] Package longtable Warning: Column widths have changed (longtable) in table 47.710 on input line 163. [1484] [1485] Package longtable Warning: Column widths have changed (longtable) in table 47.713 on input line 290. Package longtable Warning: Column widths have changed (longtable) in table 47.714 on input line 320. ) (./namespacemom__file__parser.tex [1486] [1487] Underfull \hbox (badness 2065) in paragraph at lines 82--83 []\T1/phv/m/n/10 subroutine [][]log[]_[]param[]_[]int[]_[]array[][] (CS, mod-u- le-name, var-name, value, desc, units, de-fault, layout[]Param, [1488] [1489] Package longtable Warning: Column widths have changed (longtable) in table 47.715 on input line 173. [1490] [1491] Package longtable Warning: Column widths have changed (longtable) in table 47.717 on input line 332. [1492] Package longtable Warning: Column widths have changed (longtable) in table 47.718 on input line 359. Package longtable Warning: Column widths have changed (longtable) in table 47.719 on input line 397. [1493] Underfull \hbox (badness 10000) detected at line 398 [][][] [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] Underfull \vbox (badness 10000) has occurred while \output is active [1508] Underfull \vbox (badness 10000) has occurred while \output is active [1509] Underfull \vbox (badness 10000) has occurred while \output is active [1510] Package longtable Warning: Column widths have changed (longtable) in table 47.730 on input line 1541. [1511] Package longtable Warning: Column widths have changed (longtable) in table 47.731 on input line 1575. Overfull \vbox (31.06355pt too high) has occurred while \output is active [1512] [1513] [1514] [1515] [1516] [1517] [1518] [1519] Underfull \vbox (badness 10000) has occurred while \output is active [1520] [1521] Underfull \vbox (badness 10000) has occurred while \output is active [1522] [1523] Package longtable Warning: Column widths have changed (longtable) in table 47.742 on input line 2396. [1524] [1525] [1526] [1527] [1528] [1529] [1530] [1531] Overfull \vbox (16.03447pt too high) has occurred while \output is active [1532] [1533] [1534] [1535] Package longtable Warning: Column widths have changed (longtable) in table 47.756 on input line 3200. Underfull \vbox (badness 10000) has occurred while \output is active [1536] Package longtable Warning: Column widths have changed (longtable) in table 47.757 on input line 3230. [1537] Package longtable Warning: Column widths have changed (longtable) in table 47.758 on input line 3264. [1538]) (./namespacemom__fixed__initialization.tex [1539] [1540] [1541] [1542]) (./namespacemom__forcing__type.tex [1543] [1544] [1545] [1546] [1547] [1548] [1549] Package longtable Warning: Column widths have changed (longtable) in table 47.764 on input line 324. [1550] [1551] [1552] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(inout) \T1/pcr/m/sl/8 buoyancy[] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 net[]Heat[] [1553] [1554] Package longtable Warning: Column widths have changed (longtable) in table 47.768 on input line 659. [1555] Package longtable Warning: Column widths have changed (longtable) in table 47.770 on input line 759. Underfull \vbox (badness 10000) has occurred while \output is active [1556] Package longtable Warning: Column widths have changed (longtable) in table 47.771 on input line 828. [1557] [1558] [1559] Underfull \vbox (badness 10000) has occurred while \output is active [1560] Underfull \vbox (badness 10000) has occurred while \output is active [1561] Underfull \vbox (badness 10000) has occurred while \output is active [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] Underfull \vbox (badness 10000) has occurred while \output is active [1564] [1565] [1566] [1567] [1568] Underfull \vbox (badness 10000) has occurred while \output is active [1569] [1570] [1571] Underfull \vbox (badness 10000) has occurred while \output is active [1572] Underfull \vbox (badness 10000) has occurred while \output is active [1573] Underfull \vbox (badness 10000) has occurred while \output is active [1574] Underfull \vbox (badness 10000) has occurred while \output is active [1575] Underfull \vbox (badness 10000) has occurred while \output is active [1576] Underfull \vbox (badness 10000) has occurred while \output is active [1577] [1578] Package longtable Warning: Column widths have changed (longtable) in table 47.777 on input line 2387. [1579] [1580] Package longtable Warning: Column widths have changed (longtable) in table 47.779 on input line 2541. [1581] [1582] [1583] Package longtable Warning: Column widths have changed (longtable) in table 47.782 on input line 2738. [1584] [1585] [1586] Package longtable Warning: Column widths have changed (longtable) in table 47.785 on input line 2979. [1587] [1588] Underfull \vbox (badness 10000) has occurred while \output is active [1589] Underfull \vbox (badness 10000) has occurred while \output is active [1590] Underfull \vbox (badness 10000) has occurred while \output is active [1591] Underfull \vbox (badness 10000) has occurred while \output is active [1592] Underfull \vbox (badness 10000) has occurred while \output is active [1593] Underfull \vbox (badness 10000) has occurred while \output is active [1594] Underfull \vbox (badness 10000) has occurred while \output is active [1595] [1596] [1597] [1598] [1599] Package longtable Warning: Column widths have changed (longtable) in table 47.789 on input line 3937. [1600] Package longtable Warning: Column widths have changed (longtable) in table 47.790 on input line 4002. ) (./namespacemom__full__convection.tex [1601] [1602] Underfull \vbox (badness 10000) has occurred while \output is active [1603] Underfull \vbox (badness 10000) has occurred while \output is active [1604] [1605] Package longtable Warning: Column widths have changed (longtable) in table 47.792 on input line 361. Underfull \hbox (badness 10000) detected at line 362 [][][] [1606] Package longtable Warning: Column widths have changed (longtable) in table 47.793 on input line 438. Overfull \vbox (25.10631pt too high) has occurred while \output is active [1607] [1608]) (./namespacemom__generic__tracer.tex [1609] [1610] [1611] Underfull \vbox (badness 10000) has occurred while \output is active [1612] [1613] [1614] [1615] Underfull \vbox (badness 10000) has occurred while \output is active [1616] [1617] Package longtable Warning: Column widths have changed (longtable) in table 47.799 on input line 588. [1618] Underfull \hbox (badness 10000) detected at line 648 [][][] [1619] Overfull \vbox (42.70247pt too high) has occurred while \output is active [1620] Underfull \hbox (badness 10000) detected at line 763 [][][] [1621] [1622] [1623] Underfull \vbox (badness 10000) has occurred while \output is active [1624]) (./namespacemom__geothermal.tex [1625] Package longtable Warning: Column widths have changed (longtable) in table 47.805 on input line 86. Underfull \vbox (badness 10000) has occurred while \output is active [1626] [1627] Underfull \vbox (badness 10000) has occurred while \output is active [1628] Underfull \vbox (badness 10000) has occurred while \output is active [1629] [1630] Package longtable Warning: Column widths have changed (longtable) in table 47.806 on input line 434. [1631] Underfull \vbox (badness 10000) has occurred while \output is active [1632] [1633] Underfull \vbox (badness 10000) has occurred while \output is active [1634]) (./namespacemom__get__input.tex [1635] [1636]) (./namespacemom__grid.tex [1637] Package longtable Warning: Column widths have changed (longtable) in table 47.809 on input line 69. [1638] Underfull \hbox (badness 10000) detected at line 70 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.810 on input line 98. [1639] Package longtable Warning: Column widths have changed (longtable) in table 47.811 on input line 191. [1640] [1641] Package longtable Warning: Column widths have changed (longtable) in table 47.813 on input line 280. [1642] [1643] Underfull \vbox (badness 10000) has occurred while \output is active [1644] [1645] Package longtable Warning: Column widths have changed (longtable) in table 47.816 on input line 625. [1646] Package longtable Warning: Column widths have changed (longtable) in table 47.817 on input line 691. ) (./namespacemom__grid__initialize.tex [1647] [1648] Package longtable Warning: Column widths have changed (longtable) in table 47.818 on input line 71. Underfull \hbox (badness 10000) detected at line 72 [][][] [1649] Package longtable Warning: Column widths have changed (longtable) in table 47.819 on input line 107. Package longtable Warning: Column widths have changed (longtable) in table 47.820 on input line 150. Overfull \vbox (10.33813pt too high) has occurred while \output is active [1650] Package longtable Warning: Column widths have changed (longtable) in table 47.821 on input line 186. [1651] Package longtable Warning: Column widths have changed (longtable) in table 47.822 on input line 220. Package longtable Warning: Column widths have changed (longtable) in table 47.823 on input line 250. [1652] Package longtable Warning: Column widths have changed (longtable) in table 47.824 on input line 300. [1653] Underfull \hbox (badness 10000) detected at line 347 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.825 on input line 368. [1654] [1655] Package longtable Warning: Column widths have changed (longtable) in table 47.826 on input line 501. [1656] [1657] Package longtable Warning: Column widths have changed (longtable) in table 47.827 on input line 575. [1658] Package longtable Warning: Column widths have changed (longtable) in table 47.828 on input line 681. [1659] Package longtable Warning: Column widths have changed (longtable) in table 47.829 on input line 711. [1660] [1661] [1662] [1663] [1664] Underfull \vbox (badness 10000) has occurred while \output is active [1665] Underfull \vbox (badness 10000) has occurred while \output is active [1666] [1667] Underfull \vbox (badness 10000) has occurred while \output is active [1668] Underfull \vbox (badness 10000) has occurred while \output is active [1669] [1670] Underfull \vbox (badness 10000) has occurred while \output is active [1671]) (./namespacemom__hor__index.tex [1672] Package longtable Warning: Column widths have changed (longtable) in table 47.835 on input line 55. [1673] [1674] Package longtable Warning: Column widths have changed (longtable) in table 47.837 on input line 163. ) (./namespacemom__hor__visc.tex [1675] [1676] [1677] [1678] [1679] Package longtable Warning: Column widths have changed (longtable) in table 47.838 on input line 95. [1680] [1681] [1682] Underfull \vbox (badness 10000) has occurred while \output is active [1683] Underfull \vbox (badness 10000) has occurred while \output is active [1684] Underfull \vbox (badness 10000) has occurred while \output is active [1685] Underfull \vbox (badness 10000) has occurred while \output is active [1686] Underfull \vbox (badness 10000) has occurred while \output is active [1687] Underfull \vbox (badness 10000) has occurred while \output is active [1688] Underfull \vbox (badness 10000) has occurred while \output is active [1689] Underfull \vbox (badness 10000) has occurred while \output is active [1690] [1691] Package longtable Warning: Column widths have changed (longtable) in table 47.841 on input line 1024. [1692] Underfull \vbox (badness 10000) has occurred while \output is active [1693] Underfull \vbox (badness 10000) has occurred while \output is active [1694] Underfull \vbox (badness 10000) has occurred while \output is active [1695] Underfull \vbox (badness 10000) has occurred while \output is active [1696] Underfull \vbox (badness 10000) has occurred while \output is active [1697] Underfull \vbox (badness 10000) has occurred while \output is active [1698] Underfull \vbox (badness 10000) has occurred while \output is active [1699] Underfull \vbox (badness 10000) has occurred while \output is active [1700] Underfull \vbox (badness 10000) has occurred while \output is active [1701] Underfull \vbox (badness 10000) has occurred while \output is active [1702] Underfull \vbox (badness 10000) has occurred while \output is active [1703] Underfull \vbox (badness 10000) has occurred while \output is active [1704] Underfull \vbox (badness 10000) has occurred while \output is active [1705] Underfull \vbox (badness 10000) has occurred while \output is active [1706] [1707] [1708]) (./namespacemom__horizontal__regridding.tex [1709] Underfull \hbox (badness 10000) in paragraph at lines 79--80 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [1710] [1711] [1712] Underfull \vbox (badness 10000) has occurred while \output is active [1713] [1714] [1715] Underfull \vbox (badness 10000) has occurred while \output is active [1716] Underfull \vbox (badness 10000) has occurred while \output is active [1717] Underfull \vbox (badness 10000) has occurred while \output is active [1718] [1719] [1720] Underfull \vbox (badness 10000) has occurred while \output is active [1721] Underfull \vbox (badness 10000) has occurred while \output is active [1722] Underfull \vbox (badness 10000) has occurred while \output is active [1723] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 x[] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 y[] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] Package longtable Warning: Column widths have changed (longtable) in table 47.848 on input line 1109. [1724] Package longtable Warning: Column widths have changed (longtable) in table 47.849 on input line 1162. Overfull \vbox (13.0991pt too high) has occurred while \output is active [1725] Overfull \vbox (52.21524pt too high) has occurred while \output is active [1726]) (./namespacemom__ice__shelf.tex [1727] [1728] [1729] [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] Package longtable Warning: Column widths have changed (longtable) in table 47.853 on input line 430. [1734] [1735] [1736] [1737] [1738] Underfull \vbox (badness 10000) has occurred while \output is active [1739] Underfull \vbox (badness 10000) has occurred while \output is active [1740] Underfull \vbox (badness 10000) has occurred while \output is active [1741] Underfull \vbox (badness 10000) has occurred while \output is active [1742] Underfull \vbox (badness 10000) has occurred while \output is active [1743] Underfull \vbox (badness 10000) has occurred while \output is active [1744] [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Underfull \vbox (badness 10000) has occurred while \output is active [1749] Underfull \vbox (badness 10000) has occurred while \output is active [1750] Underfull \vbox (badness 10000) has occurred while \output is active [1751] Underfull \vbox (badness 10000) has occurred while \output is active [1752] [1753] [1754] Package longtable Warning: Column widths have changed (longtable) in table 47.861 on input line 2007. [1755]) (./namespacemom__ice__shelf__dynamics.tex [1756] [1757] [1758] Underfull \vbox (badness 10000) has occurred while \output is active [1759] [1760] Package longtable Warning: Column widths have changed (longtable) in table 47.863 on input line 296. [1761] Package longtable Warning: Column widths have changed (longtable) in table 47.864 on input line 375. [1762] Package longtable Warning: Column widths have changed (longtable) in table 47.865 on input line 464. [1763] Package longtable Warning: Column widths have changed (longtable) in table 47.866 on input line 541. [1764] Underfull \vbox (badness 10000) has occurred while \output is active [1765] Underfull \vbox (badness 10000) has occurred while \output is active [1766] Package longtable Warning: Column widths have changed (longtable) in table 47.867 on input line 769. [1767] [1768] [1769] [1770] Underfull \vbox (badness 10000) has occurred while \output is active [1771] [1772] [1773] [1774] [1775] [1776] Underfull \vbox (badness 10000) has occurred while \output is active [1777] Overfull \vbox (13.57463pt too high) has occurred while \output is active [1778] [1779] [1780] [1781] Overfull \vbox (35.12973pt too high) has occurred while \output is active [1782] [1783] Overfull \vbox (30.19351pt too high) has occurred while \output is active [1784] [1785] [1786] Underfull \vbox (badness 10000) has occurred while \output is active [1787] Underfull \vbox (badness 10000) has occurred while \output is active [1788] Underfull \vbox (badness 10000) has occurred while \output is active [1789] Package longtable Warning: Column widths have changed (longtable) in table 47.880 on input line 2399. [1790] Underfull \vbox (badness 10000) has occurred while \output is active [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] Overfull \vbox (1.09367pt too high) has occurred while \output is active [1793] [1794] Package longtable Warning: Column widths have changed (longtable) in table 47.882 on input line 2774. Underfull \hbox (badness 10000) detected at line 2775 [][][] [1795] [1796] Package longtable Warning: Column widths have changed (longtable) in table 47.884 on input line 2924. [1797] [1798] Underfull \vbox (badness 10000) has occurred while \output is active [1799] Underfull \vbox (badness 10000) has occurred while \output is active [1800] Underfull \vbox (badness 10000) has occurred while \output is active [1801] Package longtable Warning: Column widths have changed (longtable) in table 47.886 on input line 3311. Underfull \vbox (badness 10000) has occurred while \output is active [1802] [1803] [1804] [1805] [1806] Package longtable Warning: Column widths have changed (longtable) in table 47.890 on input line 3653. Overfull \vbox (22.12805pt too high) has occurred while \output is active [1807] [1808] Underfull \vbox (badness 10000) has occurred while \output is active [1809] Package longtable Warning: Column widths have changed (longtable) in table 47.891 on input line 3868. [1810] [1811] [1812] Package longtable Warning: Column widths have changed (longtable) in table 47.894 on input line 4062. [1813] [1814] Underfull \vbox (badness 10000) has occurred while \output is active [1815]) (./namespacemom__ice__shelf__initialize.tex [1816] [1817] [1818] [1819] [1820]) (./namespacemom__ice__shelf__state.tex [1821] Package longtable Warning: Column widths have changed (longtable) in table 47.900 on input line 70. ) (./namespacemom__int__tide__input.tex [1822] [1823] Package longtable Warning: Column widths have changed (longtable) in table 47.901 on input line 59. [1824] [1825] [1826] Underfull \vbox (badness 10000) has occurred while \output is active [1827] [1828] Package longtable Warning: Column widths have changed (longtable) in table 47.904 on input line 434. [1829]) (./namespacemom__interface__heights.tex [1830] [1831] Underfull \vbox (badness 10000) has occurred while \output is active [1832] [1833] Underfull \vbox (badness 10000) has occurred while \output is active [1834]) (./namespacemom__internal__tides.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [1835] Package longtable Warning: Column widths have changed (longtable) in table 47.907 on input line 84. Overfull \vbox (36.89885pt too high) has occurred while \output is active [1836] [1837] [1838] [1839] Underfull \vbox (badness 10000) has occurred while \output is active [1840] Underfull \vbox (badness 10000) has occurred while \output is active [1841] Underfull \vbox (badness 10000) has occurred while \output is active [1842] Underfull \vbox (badness 10000) has occurred while \output is active [1843] Underfull \vbox (badness 10000) has occurred while \output is active [1844] Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(inout) Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(out) \T1/pcr/m/sl/8 T[] [1845] [1846] Package longtable Warning: Column widths have changed (longtable) in table 47.912 on input line 873. [1847] [1848] [1849] Package longtable Warning: Column widths have changed (longtable) in table 47.914 on input line 1072. [1850] [1851] [1852] [1853] Package longtable Warning: Column widths have changed (longtable) in table 47.917 on input line 1348. [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \vbox (badness 10000) has occurred while \output is active [1857] Underfull \vbox (badness 10000) has occurred while \output is active [1858] Underfull \vbox (badness 10000) has occurred while \output is active [1859] [1860] Underfull \vbox (badness 10000) has occurred while \output is active [1861] Underfull \vbox (badness 10000) has occurred while \output is active [1862] Underfull \vbox (badness 10000) has occurred while \output is active [1863] Underfull \vbox (badness 10000) has occurred while \output is active [1864] Underfull \vbox (badness 10000) has occurred while \output is active [1865] Overfull \vbox (21.70555pt too high) has occurred while \output is active [1866] [1867] [1868] [1869] Package longtable Warning: Column widths have changed (longtable) in table 47.922 on input line 2504. [1870] [1871] [1872] [1873] Package longtable Warning: Column widths have changed (longtable) in table 47.924 on input line 2796. [1874] Package longtable Warning: Column widths have changed (longtable) in table 47.925 on input line 2863. [1875] Package longtable Warning: Column widths have changed (longtable) in table 47.926 on input line 3004. [1876]) (./namespacemom__intrinsic__functions.tex [1877]) (./namespacemom__io.tex [1878] [1879] [1880] Underfull \hbox (badness 10000) detected at line 94 [][][] Overfull \vbox (81.31973pt too high) has occurred while \output is active [1881] [1882] Underfull \vbox (badness 10000) has occurred while \output is active [1883] Underfull \vbox (badness 10000) has occurred while \output is active [1884] Underfull \hbox (badness 10000) detected at line 426 [][][] [1885] [1886] [1887] [1888] [1889] [1890] [1891] [1892] [1893] [1894] Underfull \hbox (badness 10000) detected at line 1056 [][][] [1895] Underfull \vbox (badness 10000) has occurred while \output is active [1896] [1897] [1898] [1899] Underfull \vbox (badness 10000) has occurred while \output is active [1900] Package longtable Warning: Column widths have changed (longtable) in table 47.945 on input line 1465. [1901] [1902] Underfull \hbox (badness 10000) detected at line 1523 [][][] ) (./namespacemom__isopycnal__slopes.tex [1903] Overfull \vbox (20.40102pt too high) has occurred while \output is active [1904] [1905] Underfull \vbox (badness 10000) has occurred while \output is active [1906] Underfull \vbox (badness 10000) has occurred while \output is active [1907] Underfull \vbox (badness 10000) has occurred while \output is active [1908] [1909] [1910]) (./namespacemom__kappa__shear.tex [1911] [1912] [1913] [1914] Underfull \vbox (badness 10000) has occurred while \output is active [1915] Underfull \vbox (badness 10000) has occurred while \output is active [1916] [1917] [1918] Underfull \vbox (badness 10000) has occurred while \output is active [1919] Underfull \vbox (badness 10000) has occurred while \output is active [1920] [1921] [1922] Underfull \vbox (badness 10000) has occurred while \output is active [1923] [1924] [1925] Underfull \vbox (badness 10000) has occurred while \output is active [1926] Underfull \vbox (badness 10000) has occurred while \output is active [1927] Underfull \vbox (badness 10000) has occurred while \output is active [1928] Underfull \vbox (badness 10000) has occurred while \output is active [1929] Underfull \vbox (badness 10000) has occurred while \output is active [1930] Underfull \vbox (badness 10000) has occurred while \output is active [1931] [1932] [1933] [1934] Underfull \vbox (badness 10000) has occurred while \output is active [1935] Underfull \vbox (badness 10000) has occurred while \output is active [1936] Underfull \vbox (badness 10000) has occurred while \output is active [1937] Underfull \vbox (badness 10000) has occurred while \output is active [1938] [1939] Underfull \hbox (badness 10000) detected at line 2018 [][][] [1940] Underfull \vbox (badness 10000) has occurred while \output is active [1941] [1942]) (./namespacemom__lateral__boundary__diffusion.tex [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] Underfull \vbox (badness 10000) has occurred while \output is active [1951] Underfull \vbox (badness 10000) has occurred while \output is active [1952] [1953] [1954] Underfull \vbox (badness 10000) has occurred while \output is active [1955] [1956] Package longtable Warning: Column widths have changed (longtable) in table 47.962 on input line 889. [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] Underfull \vbox (badness 10000) has occurred while \output is active [1959] [1960] Package longtable Warning: Column widths have changed (longtable) in table 47.964 on input line 1183. [1961] Underfull \vbox (badness 10000) has occurred while \output is active [1962] Underfull \vbox (badness 10000) has occurred while \output is active [1963] Underfull \vbox (badness 10000) has occurred while \output is active [1964] Underfull \vbox (badness 10000) has occurred while \output is active [1965] [1966]) (./namespacemom__lateral__mixing__coeffs.tex [1967] [1968] [1969] Package longtable Warning: Column widths have changed (longtable) in table 47.970 on input line 128. [1970] [1971] Underfull \vbox (badness 10000) has occurred while \output is active [1972] Package longtable Warning: Column widths have changed (longtable) in table 47.972 on input line 366. [1973] Underfull \vbox (badness 10000) has occurred while \output is active [1974] Underfull \vbox (badness 10000) has occurred while \output is active [1975] [1976] Package longtable Warning: Column widths have changed (longtable) in table 47.973 on input line 643. [1977] [1978] Underfull \vbox (badness 10000) has occurred while \output is active [1979] [1980] Package longtable Warning: Column widths have changed (longtable) in table 47.975 on input line 920. [1981] Underfull \vbox (badness 10000) has occurred while \output is active [1982] [1983] [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] Underfull \vbox (badness 10000) has occurred while \output is active [1986] Underfull \vbox (badness 10000) has occurred while \output is active [1987] Underfull \vbox (badness 10000) has occurred while \output is active [1988]) (./namespacemom__marine__ice.tex [1989] [1990] [1991] Overfull \vbox (43.3866pt too high) has occurred while \output is active [1992]) (./namespacemom__meke.tex [1993] [1994] [1995] [1996] [1997] [1998] [1999] [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] [2002] Package longtable Warning: Column widths have changed (longtable) in table 47.985 on input line 497. [2003] [2004] Underfull \vbox (badness 10000) has occurred while \output is active [2005] Underfull \vbox (badness 10000) has occurred while \output is active [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] Package longtable Warning: Column widths have changed (longtable) in table 47.989 on input line 1183. [2012] Underfull \vbox (badness 10000) has occurred while \output is active [2013] Underfull \vbox (badness 10000) has occurred while \output is active [2014] Underfull \vbox (badness 10000) has occurred while \output is active [2015] Underfull \vbox (badness 10000) has occurred while \output is active [2016] Underfull \vbox (badness 10000) has occurred while \output is active [2017] Underfull \vbox (badness 10000) has occurred while \output is active [2018]) (./namespacemom__mixed__layer__restrat.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. [2019] [2020] [2021] Package longtable Warning: Column widths have changed (longtable) in table 47.991 on input line 115. [2022] Package longtable Warning: Column widths have changed (longtable) in table 47.992 on input line 181. Underfull \vbox (badness 10000) has occurred while \output is active [2023] [2024] Underfull \vbox (badness 10000) has occurred while \output is active [2025] [2026] Package longtable Warning: Column widths have changed (longtable) in table 47.993 on input line 455. [2027] Underfull \vbox (badness 10000) has occurred while \output is active [2028] Underfull \vbox (badness 10000) has occurred while \output is active [2029] Underfull \vbox (badness 10000) has occurred while \output is active [2030] Underfull \vbox (badness 10000) has occurred while \output is active [2031] Underfull \vbox (badness 10000) has occurred while \output is active [2032] [2033] Underfull \vbox (badness 10000) has occurred while \output is active [2034] [2035]) (./namespacemom__neutral__diffusion.tex [2036] [2037] Overfull \hbox (120.57199pt too wide) in paragraph at lines 53--53 []\T1/phv/m/sl/9 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/9 ^^A\OML/cmm/m/it/9 ^^Z \OT1/cmr/m/n/9 = [] []$\T1/phv/m /sl/9 . [2038] Underfull \hbox (badness 10000) detected at line 122 [][][] [2039] Package longtable Warning: Column widths have changed (longtable) in table 47.997 on input line 169. Underfull \hbox (badness 10000) detected at line 170 [][][] [2040] [2041] Package longtable Warning: Column widths have changed (longtable) in table 47.999 on input line 322. [2042] Overfull \hbox (132.78908pt too wide) in paragraph at lines 352--353 []\T1/phv/m/n/10 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/10 ^^A\OML/cmm/m/it/10 ^^Z \OT1/cmr/m/n/10 = [] []$\T1/ph v/m/n/10 . [2043] Package longtable Warning: Column widths have changed (longtable) in table 47.1001 on input line 431. Underfull \hbox (badness 10000) detected at line 432 [][][] [2044] Underfull \vbox (badness 10000) has occurred while \output is active [2045] [2046] Underfull \hbox (badness 10000) detected at line 573 [][][] [2047] [2048] Package longtable Warning: Column widths have changed (longtable) in table 47.1003 on input line 753. [2049] Underfull \vbox (badness 10000) has occurred while \output is active [2050] Underfull \vbox (badness 10000) has occurred while \output is active [2051] [2052] [2053] Underfull \vbox (badness 10000) has occurred while \output is active [2054] Underfull \vbox (badness 10000) has occurred while \output is active [2055] Underfull \vbox (badness 10000) has occurred while \output is active [2056] Package longtable Warning: Column widths have changed (longtable) in table 47.1005 on input line 1334. [2057] Package longtable Warning: Column widths have changed (longtable) in table 47.1006 on input line 1385. [2058] [2059] [2060] [2061] Package longtable Warning: Column widths have changed (longtable) in table 47.1009 on input line 1558. [2062] Package longtable Warning: Column widths have changed (longtable) in table 47.1011 on input line 1662. [2063] Underfull \vbox (badness 10000) has occurred while \output is active [2064] Underfull \vbox (badness 10000) has occurred while \output is active [2065] Underfull \vbox (badness 10000) has occurred while \output is active [2066] Package longtable Warning: Column widths have changed (longtable) in table 47.1012 on input line 1952. [2067] Underfull \vbox (badness 10000) has occurred while \output is active [2068] Underfull \vbox (badness 10000) has occurred while \output is active [2069] [2070] Package longtable Warning: Column widths have changed (longtable) in table 47.1013 on input line 2266. [2071] Underfull \vbox (badness 10000) has occurred while \output is active [2072] [2073] [2074] Package longtable Warning: Column widths have changed (longtable) in table 47.1014 on input line 2468. [2075] Underfull \vbox (badness 10000) has occurred while \output is active [2076] Underfull \vbox (badness 10000) has occurred while \output is active [2077] [2078] [2079] Underfull \vbox (badness 10000) has occurred while \output is active [2080] Package longtable Warning: Column widths have changed (longtable) in table 47.1017 on input line 2977. [2081] [2082] Underfull \vbox (badness 10000) has occurred while \output is active [2083] [2084] [2085] [2086] [2087] [2088] Package longtable Warning: Column widths have changed (longtable) in table 47.1021 on input line 3402. [2089] [2090] Package longtable Warning: Column widths have changed (longtable) in table 47.1023 on input line 3528. [2091] [2092] [2093] Package longtable Warning: Column widths have changed (longtable) in table 47.1026 on input line 3732. [2094] Package longtable Warning: Column widths have changed (longtable) in table 47.1027 on input line 3793. [2095] [2096] Package longtable Warning: Column widths have changed (longtable) in table 47.1028 on input line 3860. [2097] Package longtable Warning: Column widths have changed (longtable) in table 47.1029 on input line 3926. [2098] Package longtable Warning: Column widths have changed (longtable) in table 47.1030 on input line 3988. [2099] Package longtable Warning: Column widths have changed (longtable) in table 47.1031 on input line 4062. [2100]) (./namespacemom__obsolete__diagnostics.tex [2101] [2102]) (./namespacemom__obsolete__params.tex [2103] [2104] [2105] [2106] [2107]) (./namespacemom__ocmip2__cfc.tex [2108] [2109] [2110] Package longtable Warning: Column widths have changed (longtable) in table 47.1041 on input line 125. [2111] [2112] Overfull \vbox (4.64684pt too high) has occurred while \output is active [2113] [2114] [2115] Underfull \hbox (badness 10000) detected at line 445 [][][] [2116] [2117] [2118] Underfull \vbox (badness 10000) has occurred while \output is active [2119] Underfull \vbox (badness 10000) has occurred while \output is active [2120]) (./namespaceMOM__oda__driver__mod.tex) (./namespacemom__oda__driver__mod.tex [2121] [2122] Package longtable Warning: Column widths have changed (longtable) in table 47.1048 on input line 73. [2123] [2124] Package longtable Warning: Column widths have changed (longtable) in table 47.1051 on input line 235. [2125] Underfull \vbox (badness 10000) has occurred while \output is active [2126] Underfull \vbox (badness 10000) has occurred while \output is active [2127] Package longtable Warning: Column widths have changed (longtable) in table 47.1052 on input line 448. [2128] Package longtable Warning: Column widths have changed (longtable) in table 47.1053 on input line 494. [2129] Package longtable Warning: Column widths have changed (longtable) in table 47.1055 on input line 566. Package longtable Warning: Column widths have changed (longtable) in table 47.1056 on input line 621. Overfull \vbox (67.32932pt too high) has occurred while \output is active [2130]) (./namespacemom__offline__aux.tex [2131] Package longtable Warning: Column widths have changed (longtable) in table 47.1057 on input line 55. Overfull \vbox (15.37663pt too high) has occurred while \output is active [2132] [2133] Package longtable Warning: Column widths have changed (longtable) in table 47.1058 on input line 150. [2134] Package longtable Warning: Column widths have changed (longtable) in table 47.1059 on input line 270. [2135] [2136] Package longtable Warning: Column widths have changed (longtable) in table 47.1060 on input line 366. [2137] Package longtable Warning: Column widths have changed (longtable) in table 47.1061 on input line 493. Overfull \vbox (5.58195pt too high) has occurred while \output is active [2138] [2139] [2140] Package longtable Warning: Column widths have changed (longtable) in table 47.1063 on input line 698. [2141] Package longtable Warning: Column widths have changed (longtable) in table 47.1064 on input line 763. [2142] [2143] [2144] [2145] [2146] [2147] Underfull \vbox (badness 10000) has occurred while \output is active [2148]) (./namespacemom__offline__main.tex [2149] [2150] [2151] [2152] Overfull \vbox (11.18053pt too high) has occurred while \output is active [2153] Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isdb[]: cs%g %iedb, cs%g %jsd[]: cs%g % jed, cs%g %ke), intent(inout) Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isd[]: cs%g %ied, cs%g %jsdb[]: cs%g %j edb, cs%g %ke), intent(inout) [2154] [2155] Underfull \vbox (badness 10000) has occurred while \output is active [2156] [2157] [2158] Underfull \vbox (badness 10000) has occurred while \output is active [2159] [2160] [2161] [2162] [2163] [2164] [2165] Underfull \vbox (badness 10000) has occurred while \output is active [2166] [2167] [2168] Underfull \vbox (badness 10000) has occurred while \output is active [2169] Underfull \vbox (badness 10000) has occurred while \output is active [2170] Package longtable Warning: Column widths have changed (longtable) in table 47.1077 on input line 1485. [2171] Package longtable Warning: Column widths have changed (longtable) in table 47.1078 on input line 1537. [2172] Package longtable Warning: Column widths have changed (longtable) in table 47.1079 on input line 1599. [2173] Package longtable Warning: Column widths have changed (longtable) in table 47.1080 on input line 1679. [2174] Package longtable Warning: Column widths have changed (longtable) in table 47.1081 on input line 1736. [2175]) (./namespacemom__opacity.tex [2176] [2177] [2178] [2179] Underfull \vbox (badness 10000) has occurred while \output is active [2180] Underfull \vbox (badness 10000) has occurred while \output is active [2181] Underfull \vbox (badness 10000) has occurred while \output is active [2182] Package longtable Warning: Column widths have changed (longtable) in table 47.1083 on input line 429. Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied, gv %ke ), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied), inten t(out), optional \T1/pcr/m/sl/8 pen[]S[]W[] [2183] [2184] Underfull \hbox (badness 10000) in paragraph at lines 548--549 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional Overfull \vbox (50.97925pt too high) has occurred while \output is active [2185] [2186] Underfull \vbox (badness 10000) has occurred while \output is active [2187] [2188] Underfull \vbox (badness 10000) has occurred while \output is active [2189] Underfull \vbox (badness 10000) has occurred while \output is active [2190] Underfull \hbox (badness 10000) detected at line 1009 [][][] [2191] Underfull \hbox (badness 10000) detected at line 1039 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1090 on input line 1078. Underfull \hbox (badness 10000) detected at line 1079 [][][] Underfull \hbox (badness 10000) in paragraph at lines 1098--1099 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional [2192] [2193] Underfull \vbox (badness 10000) has occurred while \output is active [2194] [2195] [2196] [2197] Underfull \hbox (badness 10000) detected at line 1460 [][][] ) (./namespacemom__open__boundary.tex [2198] [2199] [2200] Underfull \hbox (badness 862) in paragraph at lines 120--121 []\T1/phv/m/n/10 subroutine, pub-lic [][]open[]_[]boundary[]_[]register[]_[]res tarts[][] (HI, GV, O[]BC, Reg, param[]_[]file, restart[]_[][]C[]Sp, use[]_[] [2201] Underfull \hbox (badness 10000) detected at line 187 [][][] [2202] Underfull \vbox (badness 10000) has occurred while \output is active [2203] [2204] [2205] Underfull \vbox (badness 10000) has occurred while \output is active [2206] Package longtable Warning: Column widths have changed (longtable) in table 47.1098 on input line 532. [2207] Package longtable Warning: Column widths have changed (longtable) in table 47.1099 on input line 618. [2208] Package longtable Warning: Column widths have changed (longtable) in table 47.1100 on input line 704. [2209] [2210] [2211] Underfull \vbox (badness 10000) has occurred while \output is active [2212] [2213] Package longtable Warning: Column widths have changed (longtable) in table 47.1103 on input line 1043. [2214] Underfull \vbox (badness 10000) has occurred while \output is active [2215] Underfull \vbox (badness 10000) has occurred while \output is active [2216] Underfull \vbox (badness 10000) has occurred while \output is active [2217] [2218] [2219] Underfull \vbox (badness 10000) has occurred while \output is active [2220] [2221] Package longtable Warning: Column widths have changed (longtable) in table 47.1107 on input line 1610. Overfull \vbox (39.93549pt too high) has occurred while \output is active [2222] [2223] Underfull \vbox (badness 10000) has occurred while \output is active [2224] Underfull \vbox (badness 10000) has occurred while \output is active [2225] [2226] [2227] Package longtable Warning: Column widths have changed (longtable) in table 47.1111 on input line 2057. [2228] Package longtable Warning: Column widths have changed (longtable) in table 47.1112 on input line 2189. [2229] Underfull \vbox (badness 10000) has occurred while \output is active [2230] [2231] [2232] [2233] [2234] Package longtable Warning: Column widths have changed (longtable) in table 47.1116 on input line 2559. [2235] Package longtable Warning: Column widths have changed (longtable) in table 47.1117 on input line 2627. [2236] Package longtable Warning: Column widths have changed (longtable) in table 47.1118 on input line 2692. [2237] [2238] [2239] [2240] Underfull \vbox (badness 10000) has occurred while \output is active [2241] [2242] Underfull \vbox (badness 10000) has occurred while \output is active [2243] Package longtable Warning: Column widths have changed (longtable) in table 47.1124 on input line 3222. [2244] Underfull \vbox (badness 10000) has occurred while \output is active [2245] Underfull \vbox (badness 10000) has occurred while \output is active [2246] Underfull \vbox (badness 10000) has occurred while \output is active [2247] Underfull \vbox (badness 10000) has occurred while \output is active [2248] Underfull \vbox (badness 10000) has occurred while \output is active [2249] Underfull \vbox (badness 10000) has occurred while \output is active [2250] Underfull \vbox (badness 10000) has occurred while \output is active [2251] Underfull \vbox (badness 10000) has occurred while \output is active [2252] Underfull \vbox (badness 10000) has occurred while \output is active [2253] Underfull \vbox (badness 10000) has occurred while \output is active [2254] Underfull \vbox (badness 10000) has occurred while \output is active [2255] Underfull \vbox (badness 10000) has occurred while \output is active [2256] Underfull \vbox (badness 10000) has occurred while \output is active [2257] [2258] [2259] [2260] [2261] Package longtable Warning: Column widths have changed (longtable) in table 47.1129 on input line 4600. [2262] [2263] Overfull \vbox (46.04994pt too high) has occurred while \output is active [2264] [2265] [2266] [2267] [2268] Package longtable Warning: Column widths have changed (longtable) in table 47.1135 on input line 5093. [2269] Package longtable Warning: Column widths have changed (longtable) in table 47.1136 on input line 5160. [2270] Underfull \vbox (badness 10000) has occurred while \output is active [2271] [2272] Underfull \vbox (badness 10000) has occurred while \output is active [2273] Overfull \vbox (6.87355pt too high) has occurred while \output is active [2274] [2275] [2276] Package longtable Warning: Column widths have changed (longtable) in table 47.1139 on input line 5643. [2277] Package longtable Warning: Column widths have changed (longtable) in table 47.1140 on input line 5713. [2278] Underfull \vbox (badness 10000) has occurred while \output is active [2279] Underfull \vbox (badness 10000) has occurred while \output is active [2280] Underfull \vbox (badness 10000) has occurred while \output is active [2281] Underfull \vbox (badness 10000) has occurred while \output is active [2282] Underfull \vbox (badness 10000) has occurred while \output is active [2283] Underfull \vbox (badness 10000) has occurred while \output is active [2284] Underfull \vbox (badness 10000) has occurred while \output is active [2285] Package longtable Warning: Column widths have changed (longtable) in table 47.1141 on input line 6419. [2286] [2287]) (./namespacemom__pointaccel.tex [2288] [2289] Underfull \hbox (badness 10000) in paragraph at lines 118--119 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv Package longtable Warning: Column widths have changed (longtable) in table 47.1143 on input line 156. [2290] [2291] Underfull \vbox (badness 10000) has occurred while \output is active [2292] Underfull \vbox (badness 10000) has occurred while \output is active [2293] Underfull \vbox (badness 10000) has occurred while \output is active [2294] Underfull \hbox (badness 10000) in paragraph at lines 497--498 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv Package longtable Warning: Column widths have changed (longtable) in table 47.1144 on input line 535. [2295] [2296] Underfull \vbox (badness 10000) has occurred while \output is active [2297] Underfull \vbox (badness 10000) has occurred while \output is active [2298] Underfull \vbox (badness 10000) has occurred while \output is active [2299]) (./namespacemom__pressureforce.tex Underfull \hbox (badness 10000) in paragraph at lines 29--30 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [2300] Package longtable Warning: Column widths have changed (longtable) in table 47.1145 on input line 61. [2301] [2302]) (./namespacemom__pressureforce__fv.tex [2303] [2304] Package longtable Warning: Column widths have changed (longtable) in table 47.1148 on input line 73. [2305] Underfull \vbox (badness 10000) has occurred while \output is active [2306] Underfull \vbox (badness 10000) has occurred while \output is active [2307] Underfull \vbox (badness 10000) has occurred while \output is active [2308] Underfull \vbox (badness 10000) has occurred while \output is active [2309] [2310] [2311] [2312] Package longtable Warning: Column widths have changed (longtable) in table 47.1151 on input line 640. [2313] Underfull \vbox (badness 10000) has occurred while \output is active [2314] Underfull \vbox (badness 10000) has occurred while \output is active [2315] Underfull \vbox (badness 10000) has occurred while \output is active [2316]) (./namespacemom__pressureforce__mont.tex [2317] Package longtable Warning: Column widths have changed (longtable) in table 47.1152 on input line 69. [2318] [2319] Underfull \vbox (badness 10000) has occurred while \output is active [2320] Underfull \vbox (badness 10000) has occurred while \output is active [2321] [2322] [2323] [2324] Package longtable Warning: Column widths have changed (longtable) in table 47.1155 on input line 486. [2325] Underfull \vbox (badness 10000) has occurred while \output is active [2326] Underfull \vbox (badness 10000) has occurred while \output is active [2327] Underfull \vbox (badness 10000) has occurred while \output is active [2328] [2329] [2330] [2331] [2332]) (./namespacemom__random.tex [2333] [2334] [2335] Package longtable Warning: Column widths have changed (longtable) in table 47.1158 on input line 75. Package longtable Warning: Column widths have changed (longtable) in table 47.1159 on input line 105. [2336] Package longtable Warning: Column widths have changed (longtable) in table 47.1160 on input line 141. Package longtable Warning: Column widths have changed (longtable) in table 47.1161 on input line 181. [2337] Package longtable Warning: Column widths have changed (longtable) in table 47.1162 on input line 226. [2338] Package longtable Warning: Column widths have changed (longtable) in table 47.1164 on input line 291. Underfull \vbox (badness 10000) has occurred while \output is active [2339] [2340] Underfull \vbox (badness 10000) has occurred while \output is active [2341] [2342] Package longtable Warning: Column widths have changed (longtable) in table 47.1167 on input line 613. [2343] Package longtable Warning: Column widths have changed (longtable) in table 47.1168 on input line 655. ) (./namespacemom__regridding.tex [2344] [2345] Underfull \hbox (badness 1173) in paragraph at lines 78--79 \T1/phv/m/n/10 _[]scheme, depth[]_[]of[]_[]time[]_[]filter[]_[]shallow, depth[] _[]of[]_[]time[]_[]filter[]_[]deep, compress[]_[]fraction, ref[]_[]pressure, dz []_[] Underfull \hbox (badness 1661) in paragraph at lines 78--79 \T1/phv/m/n/10 min[]_[]surface, nz[]_[]fixed[]_[]surface, Rho[]_[][]M[]L[]_[]av g[]_[]depth, nlay[]_[][]M[]L[]_[]to[]_[]interior, fix[]_[]haloclines, halocline []_[]filt[]_[]len, [2346] [2347] Package longtable Warning: Column widths have changed (longtable) in table 47.1169 on input line 135. Underfull \hbox (badness 10000) in paragraph at lines 202--203 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [2348] [2349] [2350] Underfull \vbox (badness 10000) has occurred while \output is active [2351] Underfull \hbox (badness 10000) detected at line 425 [][][] [2352] [2353] [2354] Underfull \hbox (badness 10000) in paragraph at lines 627--628 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [2355] Underfull \vbox (badness 10000) has occurred while \output is active [2356] [2357] [2358] [2359] Overfull \hbox (20.61044pt too wide) in paragraph at lines 1007--1008 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed,cs%nk), in tent(inout) \T1/pcr/m/sl/8 h[]_[]new \T1/pcr/m/n/8 ) [private] [2360] Overfull \vbox (26.79585pt too high) has occurred while \output is active [2361] [2362] [2363] Package longtable Warning: Column widths have changed (longtable) in table 47.1181 on input line 1297. Overfull \vbox (35.17787pt too high) has occurred while \output is active [2364] [2365] Package longtable Warning: Column widths have changed (longtable) in table 47.1182 on input line 1377. Package longtable Warning: Column widths have changed (longtable) in table 47.1183 on input line 1423. [2366] Package longtable Warning: Column widths have changed (longtable) in table 47.1184 on input line 1467. [2367] Underfull \vbox (badness 10000) has occurred while \output is active [2368] Package longtable Warning: Column widths have changed (longtable) in table 47.1185 on input line 1621. Package longtable Warning: Column widths have changed (longtable) in table 47.1186 on input line 1647. [2369] Package longtable Warning: Column widths have changed (longtable) in table 47.1187 on input line 1673. Package longtable Warning: Column widths have changed (longtable) in table 47.1188 on input line 1699. [2370] Underfull \hbox (badness 10000) detected at line 1728 [][][] [2371] Package longtable Warning: Column widths have changed (longtable) in table 47.1191 on input line 1830. [2372] Package longtable Warning: Column widths have changed (longtable) in table 47.1192 on input line 1879. [2373] Package longtable Warning: Column widths have changed (longtable) in table 47.1193 on input line 1924. Underfull \hbox (badness 10000) detected at line 1925 [][][] [2374] Package longtable Warning: Column widths have changed (longtable) in table 47.1194 on input line 1985. [2375] [2376] [2377] Underfull \vbox (badness 10000) has occurred while \output is active [2378] Underfull \vbox (badness 10000) has occurred while \output is active [2379] Underfull \vbox (badness 10000) has occurred while \output is active [2380] Underfull \vbox (badness 10000) has occurred while \output is active [2381] Underfull \vbox (badness 10000) has occurred while \output is active [2382] Underfull \vbox (badness 10000) has occurred while \output is active [2383] [2384] Underfull \vbox (badness 10000) has occurred while \output is active [2385] [2386] [2387] [2388] [2389] Underfull \vbox (badness 10000) has occurred while \output is active [2390] Package longtable Warning: Column widths have changed (longtable) in table 47.1202 on input line 3182. [2391] Package longtable Warning: Column widths have changed (longtable) in table 47.1203 on input line 3218. [2392] Package longtable Warning: Column widths have changed (longtable) in table 47.1204 on input line 3263. Underfull \hbox (badness 10000) detected at line 3307 [][][] [2393]) (./namespacemom__regularize__layers.tex [2394] [2395] Underfull \vbox (badness 10000) has occurred while \output is active [2396] [2397] Package longtable Warning: Column widths have changed (longtable) in table 47.1207 on input line 252. [2398] [2399] [2400] Package longtable Warning: Column widths have changed (longtable) in table 47.1209 on input line 441. [2401] Underfull \vbox (badness 10000) has occurred while \output is active [2402] Underfull \vbox (badness 10000) has occurred while \output is active [2403] Underfull \vbox (badness 10000) has occurred while \output is active [2404] Underfull \vbox (badness 10000) has occurred while \output is active [2405] Underfull \vbox (badness 10000) has occurred while \output is active [2406]) (./namespacemom__remapping.tex [2407] Underfull \hbox (badness 6893) in paragraph at lines 14--15 []\T1/phv/m/n/10 subroutine, pub-lic [][]remapping[]_[]set[]_[]param[][] (CS, r emapping[]_[]scheme, boundary[]_[]extrapolation, check[]_[] [2408] [2409] [2410] [2411] [2412] [2413] Package longtable Warning: Column widths have changed (longtable) in table 47.1212 on input line 385. [2414] [2415] [2416] Package longtable Warning: Column widths have changed (longtable) in table 47.1215 on input line 567. [2417] Package longtable Warning: Column widths have changed (longtable) in table 47.1216 on input line 609. [2418] [2419] [2420] Underfull \vbox (badness 10000) has occurred while \output is active [2421] Underfull \vbox (badness 10000) has occurred while \output is active [2422] Underfull \vbox (badness 10000) has occurred while \output is active [2423] Underfull \hbox (badness 10000) detected at line 1070 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1220 on input line 1083. Underfull \hbox (badness 10000) detected at line 1084 [][][] [2424] [2425] Package longtable Warning: Column widths have changed (longtable) in table 47.1222 on input line 1216. Underfull \vbox (badness 10000) has occurred while \output is active [2426] [2427] [2428] Underfull \vbox (badness 10000) has occurred while \output is active [2429] Underfull \vbox (badness 10000) has occurred while \output is active [2430] Underfull \vbox (badness 10000) has occurred while \output is active [2431] Underfull \vbox (badness 10000) has occurred while \output is active [2432] [2433] [2434] [2435] Overfull \vbox (25.43697pt too high) has occurred while \output is active [2436] [2437] [2438] [2439] Package longtable Warning: Column widths have changed (longtable) in table 47.1229 on input line 2217. [2440] Underfull \vbox (badness 10000) has occurred while \output is active [2441] Underfull \vbox (badness 10000) has occurred while \output is active [2442] Underfull \vbox (badness 10000) has occurred while \output is active [2443] Package longtable Warning: Column widths have changed (longtable) in table 47.1230 on input line 2509. [2444] Package longtable Warning: Column widths have changed (longtable) in table 47.1231 on input line 2572. [2445]) (./namespacemom__restart.tex [2446] [2447] [2448] Underfull \hbox (badness 10000) detected at line 130 [][][] [2449] Package longtable Warning: Column widths have changed (longtable) in table 47.1233 on input line 190. Underfull \hbox (badness 10000) detected at line 236 [][][] [2450] Underfull \hbox (badness 10000) detected at line 285 [][][] [2451] Underfull \vbox (badness 10000) has occurred while \output is active [2452] Package longtable Warning: Column widths have changed (longtable) in table 47.1236 on input line 444. [2453] Package longtable Warning: Column widths have changed (longtable) in table 47.1237 on input line 493. [2454] Package longtable Warning: Column widths have changed (longtable) in table 47.1238 on input line 547. [2455] Package longtable Warning: Column widths have changed (longtable) in table 47.1239 on input line 596. Package longtable Warning: Column widths have changed (longtable) in table 47.1240 on input line 651. [2456] Package longtable Warning: Column widths have changed (longtable) in table 47.1241 on input line 701. [2457] Package longtable Warning: Column widths have changed (longtable) in table 47.1242 on input line 756. [2458] Package longtable Warning: Column widths have changed (longtable) in table 47.1243 on input line 806. Package longtable Warning: Column widths have changed (longtable) in table 47.1244 on input line 861. Overfull \vbox (1.02933pt too high) has occurred while \output is active [2459] Package longtable Warning: Column widths have changed (longtable) in table 47.1245 on input line 911. [2460] Package longtable Warning: Column widths have changed (longtable) in table 47.1246 on input line 966. [2461] [2462] [2463] [2464] [2465] [2466] [2467] [2468] [2469] Underfull \vbox (badness 10000) has occurred while \output is active [2470] [2471] [2472] Underfull \vbox (badness 10000) has occurred while \output is active [2473] [2474] Underfull \hbox (badness 10000) detected at line 1833 [][][] Underfull \vbox (badness 10000) has occurred while \output is active [2475] [2476] Underfull \vbox (badness 10000) has occurred while \output is active [2477] [2478] Underfull \vbox (badness 10000) has occurred while \output is active [2479] [2480] [2481] Underfull \vbox (badness 10000) has occurred while \output is active [2482] Underfull \vbox (badness 10000) has occurred while \output is active [2483]) (./namespacemom__safe__alloc.tex [2484] Package longtable Warning: Column widths have changed (longtable) in table 47.1268 on input line 59. Package longtable Warning: Column widths have changed (longtable) in table 47.1269 on input line 100. Overfull \vbox (34.4091pt too high) has occurred while \output is active [2485] Package longtable Warning: Column widths have changed (longtable) in table 47.1270 on input line 144. [2486] Package longtable Warning: Column widths have changed (longtable) in table 47.1271 on input line 181. Package longtable Warning: Column widths have changed (longtable) in table 47.1272 on input line 222. Underfull \vbox (badness 10000) has occurred while \output is active [2487] Package longtable Warning: Column widths have changed (longtable) in table 47.1273 on input line 257. [2488] Package longtable Warning: Column widths have changed (longtable) in table 47.1274 on input line 296. Package longtable Warning: Column widths have changed (longtable) in table 47.1275 on input line 334. [2489] Package longtable Warning: Column widths have changed (longtable) in table 47.1276 on input line 376. ) (./namespacemom__set__diffusivity.tex [2490] [2491] [2492] Underfull \vbox (badness 10000) has occurred while \output is active [2493] Underfull \vbox (badness 10000) has occurred while \output is active [2494] [2495] Package longtable Warning: Column widths have changed (longtable) in table 47.1278 on input line 383. [2496] Underfull \vbox (badness 10000) has occurred while \output is active [2497] [2498] [2499] Underfull \vbox (badness 10000) has occurred while \output is active [2500] [2501] [2502] Package longtable Warning: Column widths have changed (longtable) in table 47.1281 on input line 904. [2503] [2504] Underfull \vbox (badness 10000) has occurred while \output is active [2505] [2506] [2507] Underfull \vbox (badness 10000) has occurred while \output is active [2508] [2509] Package longtable Warning: Column widths have changed (longtable) in table 47.1283 on input line 1366. [2510] Underfull \vbox (badness 10000) has occurred while \output is active [2511] [2512] [2513] [2514] Package longtable Warning: Column widths have changed (longtable) in table 47.1285 on input line 1747. [2515] Underfull \vbox (badness 10000) has occurred while \output is active [2516] Underfull \vbox (badness 10000) has occurred while \output is active [2517] Underfull \vbox (badness 10000) has occurred while \output is active [2518] Underfull \vbox (badness 10000) has occurred while \output is active [2519] Underfull \vbox (badness 10000) has occurred while \output is active [2520] Underfull \vbox (badness 10000) has occurred while \output is active [2521] [2522] [2523] Underfull \vbox (badness 10000) has occurred while \output is active [2524] Underfull \vbox (badness 10000) has occurred while \output is active [2525] Underfull \vbox (badness 10000) has occurred while \output is active [2526]) (./namespacemom__set__visc.tex [2527] Underfull \hbox (badness 10000) detected at line 64 [][][] [2528] Underfull \hbox (badness 10000) detected at line 143 [][][] [2529] Package longtable Warning: Column widths have changed (longtable) in table 47.1290 on input line 209. [2530] Underfull \vbox (badness 10000) has occurred while \output is active [2531] [2532] Underfull \vbox (badness 10000) has occurred while \output is active [2533] Underfull \vbox (badness 10000) has occurred while \output is active [2534] Underfull \vbox (badness 10000) has occurred while \output is active [2535] [2536] [2537] [2538] [2539] Underfull \vbox (badness 10000) has occurred while \output is active [2540] Underfull \vbox (badness 10000) has occurred while \output is active [2541] Underfull \vbox (badness 10000) has occurred while \output is active [2542] Underfull \vbox (badness 10000) has occurred while \output is active [2543] Underfull \vbox (badness 10000) has occurred while \output is active [2544] Underfull \vbox (badness 10000) has occurred while \output is active [2545] Underfull \vbox (badness 10000) has occurred while \output is active [2546] Underfull \vbox (badness 10000) has occurred while \output is active [2547] Underfull \vbox (badness 10000) has occurred while \output is active [2548] Underfull \vbox (badness 10000) has occurred while \output is active [2549] Underfull \vbox (badness 10000) has occurred while \output is active [2550] Overfull \vbox (8.39467pt too high) has occurred while \output is active [2551] [2552] Underfull \vbox (badness 10000) has occurred while \output is active [2553] Underfull \vbox (badness 10000) has occurred while \output is active [2554] Underfull \vbox (badness 10000) has occurred while \output is active [2555] Underfull \vbox (badness 10000) has occurred while \output is active [2556] Underfull \vbox (badness 10000) has occurred while \output is active [2557] Underfull \vbox (badness 10000) has occurred while \output is active [2558] Underfull \vbox (badness 10000) has occurred while \output is active [2559]) (./namespacemom__shared__initialization.tex [2560] Overfull \vbox (29.7233pt too high) has occurred while \output is active [2561] [2562] Package longtable Warning: Column widths have changed (longtable) in table 47.1296 on input line 208. [2563] Underfull \hbox (badness 10000) detected at line 255 [][][] [2564] Package longtable Warning: Column widths have changed (longtable) in table 47.1298 on input line 292. [2565] [2566] [2567] Overfull \vbox (22.05618pt too high) has occurred while \output is active [2568] Package longtable Warning: Column widths have changed (longtable) in table 47.1302 on input line 651. [2569] Underfull \hbox (badness 10000) detected at line 652 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1303 on input line 692. [2570] Package longtable Warning: Column widths have changed (longtable) in table 47.1304 on input line 750. [2571] [2572] Underfull \vbox (badness 10000) has occurred while \output is active [2573] [2574] [2575] Underfull \vbox (badness 10000) has occurred while \output is active [2576] Underfull \vbox (badness 10000) has occurred while \output is active [2577] [2578] Underfull \vbox (badness 10000) has occurred while \output is active [2579] [2580] [2581] Package longtable Warning: Column widths have changed (longtable) in table 47.1312 on input line 1535. Package longtable Warning: Column widths have changed (longtable) in table 47.1313 on input line 1570. Underfull \vbox (badness 10000) has occurred while \output is active [2582] [2583] Underfull \vbox (badness 10000) has occurred while \output is active [2584]) (./namespacemom__spatial__means.tex [2585] [2586] Package longtable Warning: Column widths have changed (longtable) in table 47.1316 on input line 124. [2587] Underfull \hbox (badness 10000) detected at line 125 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1317 on input line 180. [2588] [2589] [2590] [2591] Package longtable Warning: Column widths have changed (longtable) in table 47.1320 on input line 455. [2592] Underfull \hbox (badness 10000) detected at line 520 [][][] [2593] Package longtable Warning: Column widths have changed (longtable) in table 47.1322 on input line 594. [2594] Underfull \hbox (badness 10000) detected at line 595 [][][] ) (./namespacemom__sponge.tex [2595] [2596] Package longtable Warning: Column widths have changed (longtable) in table 47.1323 on input line 73. [2597] Underfull \vbox (badness 10000) has occurred while \output is active [2598] Underfull \vbox (badness 10000) has occurred while \output is active [2599] [2600] Package longtable Warning: Column widths have changed (longtable) in table 47.1324 on input line 371. Overfull \vbox (46.3142pt too high) has occurred while \output is active [2601] [2602] [2603] Overfull \vbox (19.83441pt too high) has occurred while \output is active [2604] [2605]) (./namespacemom__state__initialization.tex [2606] [2607] Underfull \hbox (badness 10000) detected at line 79 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1329 on input line 94. [2608] Package longtable Warning: Column widths have changed (longtable) in table 47.1330 on input line 188. [2609] Package longtable Warning: Column widths have changed (longtable) in table 47.1331 on input line 233. [2610] [2611] [2612] [2613] [2614] Package longtable Warning: Column widths have changed (longtable) in table 47.1334 on input line 614. [2615] [2616] [2617] [2618] Underfull \vbox (badness 10000) has occurred while \output is active [2619] [2620] [2621] Overfull \vbox (6.23174pt too high) has occurred while \output is active [2622] [2623] [2624] Underfull \hbox (badness 10000) detected at line 1251 [][][] [2625] [2626] [2627] [2628] [2629] [2630] [2631] [2632] [2633] [2634] [2635] Underfull \vbox (badness 10000) has occurred while \output is active [2636] Underfull \vbox (badness 10000) has occurred while \output is active [2637] Underfull \vbox (badness 10000) has occurred while \output is active [2638] Underfull \vbox (badness 10000) has occurred while \output is active [2639] Underfull \vbox (badness 10000) has occurred while \output is active [2640] [2641] Package longtable Warning: Column widths have changed (longtable) in table 47.1348 on input line 2505. [2642] [2643] Underfull \vbox (badness 10000) has occurred while \output is active [2644] Underfull \vbox (badness 10000) has occurred while \output is active [2645] Underfull \vbox (badness 10000) has occurred while \output is active [2646] Underfull \vbox (badness 10000) has occurred while \output is active [2647] Underfull \vbox (badness 10000) has occurred while \output is active [2648] Package longtable Warning: Column widths have changed (longtable) in table 47.1350 on input line 3099. [2649] Package longtable Warning: Column widths have changed (longtable) in table 47.1351 on input line 3133. [2650] [2651]) (./namespacemom__string__functions.tex [2652] [2653] [2654] [2655] Package longtable Warning: Column widths have changed (longtable) in table 47.1356 on input line 221. Package longtable Warning: Column widths have changed (longtable) in table 47.1357 on input line 250. [2656] Underfull \hbox (badness 10000) detected at line 283 [][][] Underfull \hbox (badness 10000) detected at line 314 [][][] [2657] Package longtable Warning: Column widths have changed (longtable) in table 47.1360 on input line 350. Underfull \hbox (badness 10000) detected at line 351 [][][] [2658] Package longtable Warning: Column widths have changed (longtable) in table 47.1361 on input line 425. Underfull \hbox (badness 10000) detected at line 426 [][][] [2659] [2660] Package longtable Warning: Column widths have changed (longtable) in table 47.1362 on input line 490. Package longtable Warning: Column widths have changed (longtable) in table 47.1363 on input line 528. [2661] Package longtable Warning: Column widths have changed (longtable) in table 47.1364 on input line 566. Underfull \hbox (badness 10000) detected at line 601 [][][] [2662] Package longtable Warning: Column widths have changed (longtable) in table 47.1366 on input line 638. [2663] Package longtable Warning: Column widths have changed (longtable) in table 47.1367 on input line 678. Package longtable Warning: Column widths have changed (longtable) in table 47.1368 on input line 711. [2664] Underfull \hbox (badness 10000) detected at line 774 [][][] ) (./namespacemom__sum__output.tex [2665] [2666] [2667] Underfull \vbox (badness 10000) has occurred while \output is active [2668] Package longtable Warning: Column widths have changed (longtable) in table 47.1371 on input line 238. [2669] Underfull \vbox (badness 10000) has occurred while \output is active [2670] Package longtable Warning: Column widths have changed (longtable) in table 47.1372 on input line 385. [2671] [2672] Underfull \vbox (badness 10000) has occurred while \output is active [2673] [2674] [2675] [2676] Underfull \vbox (badness 10000) has occurred while \output is active [2677] [2678] [2679] [2680] Underfull \vbox (badness 10000) has occurred while \output is active [2681] Underfull \vbox (badness 10000) has occurred while \output is active [2682] Underfull \vbox (badness 10000) has occurred while \output is active [2683] Underfull \vbox (badness 10000) has occurred while \output is active [2684] Underfull \vbox (badness 10000) has occurred while \output is active [2685] Underfull \vbox (badness 10000) has occurred while \output is active [2686] Underfull \vbox (badness 10000) has occurred while \output is active [2687]) (./namespacemom__surface__forcing.tex [2688] [2689] [2690] [2691] Underfull \vbox (badness 10000) has occurred while \output is active [2692] [2693] [2694] Underfull \vbox (badness 10000) has occurred while \output is active [2695] Underfull \vbox (badness 10000) has occurred while \output is active [2696] [2697] [2698] [2699] [2700] [2701] [2702] [2703] [2704] Underfull \vbox (badness 10000) has occurred while \output is active [2705] [2706] Package longtable Warning: Column widths have changed (longtable) in table 47.1389 on input line 1291. [2707] Underfull \vbox (badness 10000) has occurred while \output is active [2708] Underfull \vbox (badness 10000) has occurred while \output is active [2709] Underfull \vbox (badness 10000) has occurred while \output is active [2710] Underfull \vbox (badness 10000) has occurred while \output is active [2711] Underfull \vbox (badness 10000) has occurred while \output is active [2712] [2713] [2714] [2715] Overfull \vbox (27.8983pt too high) has occurred while \output is active [2716] Overfull \vbox (14.28166pt too high) has occurred while \output is active [2717] [2718] [2719] [2720]) (./namespacemom__tfreeze.tex [2721] [2722] [2723] Package longtable Warning: Column widths have changed (longtable) in table 47.1399 on input line 150. Package longtable Warning: Column widths have changed (longtable) in table 47.1400 on input line 192. [2724] Package longtable Warning: Column widths have changed (longtable) in table 47.1401 on input line 232. [2725] Package longtable Warning: Column widths have changed (longtable) in table 47.1402 on input line 280. ) (./namespacemom__thickness__diffuse.tex [2726] [2727] [2728] [2729] Underfull \vbox (badness 10000) has occurred while \output is active [2730] Underfull \vbox (badness 10000) has occurred while \output is active [2731] Underfull \vbox (badness 10000) has occurred while \output is active [2732] Underfull \vbox (badness 10000) has occurred while \output is active [2733] Underfull \vbox (badness 10000) has occurred while \output is active [2734] Package longtable Warning: Column widths have changed (longtable) in table 47.1405 on input line 560. [2735] Package longtable Warning: Column widths have changed (longtable) in table 47.1406 on input line 634. [2736] Underfull \vbox (badness 10000) has occurred while \output is active [2737] Underfull \vbox (badness 10000) has occurred while \output is active [2738] Underfull \vbox (badness 10000) has occurred while \output is active [2739] Underfull \vbox (badness 10000) has occurred while \output is active [2740] Underfull \vbox (badness 10000) has occurred while \output is active [2741] [2742] [2743] Underfull \vbox (badness 10000) has occurred while \output is active [2744] Underfull \vbox (badness 10000) has occurred while \output is active [2745] Underfull \vbox (badness 10000) has occurred while \output is active [2746] Underfull \vbox (badness 10000) has occurred while \output is active [2747] Underfull \vbox (badness 10000) has occurred while \output is active [2748] Underfull \vbox (badness 10000) has occurred while \output is active [2749] Underfull \vbox (badness 10000) has occurred while \output is active [2750] Underfull \vbox (badness 10000) has occurred while \output is active [2751] Underfull \vbox (badness 10000) has occurred while \output is active [2752] Underfull \vbox (badness 10000) has occurred while \output is active [2753] [2754] [2755] [2756] Underfull \vbox (badness 10000) has occurred while \output is active [2757]) (./namespacemom__tidal__forcing.tex [2758] [2759] [2760] [2761] [2762] [2763] Underfull \vbox (badness 10000) has occurred while \output is active [2764] Underfull \vbox (badness 10000) has occurred while \output is active [2765] Underfull \vbox (badness 10000) has occurred while \output is active [2766]) (./namespacemom__tidal__mixing.tex [2767] [2768] [2769] [2770] Underfull \vbox (badness 10000) has occurred while \output is active [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] Underfull \vbox (badness 10000) has occurred while \output is active [2773] Underfull \vbox (badness 10000) has occurred while \output is active [2774] Underfull \vbox (badness 10000) has occurred while \output is active [2775] Package longtable Warning: Column widths have changed (longtable) in table 47.1417 on input line 599. [2776] Underfull \vbox (badness 10000) has occurred while \output is active [2777] Underfull \vbox (badness 10000) has occurred while \output is active [2778] [2779] [2780] Package longtable Warning: Column widths have changed (longtable) in table 47.1419 on input line 957. [2781] Overfull \vbox (10.48775pt too high) has occurred while \output is active [2782] [2783] [2784] Package longtable Warning: Column widths have changed (longtable) in table 47.1422 on input line 1235. [2785] Underfull \vbox (badness 10000) has occurred while \output is active [2786] Package longtable Warning: Column widths have changed (longtable) in table 47.1424 on input line 1378. [2787] [2788] Underfull \vbox (badness 10000) has occurred while \output is active [2789] Underfull \vbox (badness 10000) has occurred while \output is active [2790] Underfull \vbox (badness 10000) has occurred while \output is active [2791] Underfull \vbox (badness 10000) has occurred while \output is active [2792] Underfull \vbox (badness 10000) has occurred while \output is active [2793]) (./namespacemom__time__manager.tex Underfull \hbox (badness 10000) detected at line 24 [][][] [2794] Package longtable Warning: Column widths have changed (longtable) in table 47.1426 on input line 33. ) (./namespacemom__tracer__advect.tex [2795] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 h[]_[] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional \T1/pcr/m/sl/8 h[]_[] [2796] [2797] Underfull \vbox (badness 10000) has occurred while \output is active [2798] Underfull \vbox (badness 10000) has occurred while \output is active [2799] Underfull \vbox (badness 10000) has occurred while \output is active [2800] [2801] [2802] Underfull \vbox (badness 10000) has occurred while \output is active [2803] Underfull \vbox (badness 10000) has occurred while \output is active [2804] Underfull \vbox (badness 10000) has occurred while \output is active [2805] [2806] [2807] Underfull \vbox (badness 10000) has occurred while \output is active [2808] Underfull \vbox (badness 10000) has occurred while \output is active [2809] Underfull \vbox (badness 10000) has occurred while \output is active [2810] Underfull \vbox (badness 10000) has occurred while \output is active [2811] [2812] [2813]) (./namespacemom__tracer__diabatic.tex [2814] [2815] Underfull \vbox (badness 10000) has occurred while \output is active [2816] Underfull \vbox (badness 10000) has occurred while \output is active [2817] Underfull \hbox (badness 10000) in paragraph at lines 285--286 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 btm[]_[] Overfull \vbox (1.75337pt too high) has occurred while \output is active [2818] [2819] Underfull \vbox (badness 10000) has occurred while \output is active [2820]) (./namespaceMOM__tracer__flow__control.tex) (./namespacemom__tracer__flow__control.tex [2821] [2822] [2823] Underfull \vbox (badness 10000) has occurred while \output is active [2824] [2825] [2826] [2827] [2828] [2829] [2830] Underfull \vbox (badness 10000) has occurred while \output is active [2831] [2832] [2833] [2834] [2835] [2836]) (./namespacemom__tracer__hor__diff.tex [2837] [2838] [2839] Underfull \vbox (badness 10000) has occurred while \output is active [2840] Underfull \vbox (badness 10000) has occurred while \output is active [2841] Underfull \vbox (badness 10000) has occurred while \output is active [2842] Underfull \vbox (badness 10000) has occurred while \output is active [2843] Underfull \vbox (badness 10000) has occurred while \output is active [2844] Underfull \vbox (badness 10000) has occurred while \output is active [2845] Underfull \vbox (badness 10000) has occurred while \output is active [2846] Underfull \vbox (badness 10000) has occurred while \output is active [2847] Underfull \vbox (badness 10000) has occurred while \output is active [2848] Underfull \vbox (badness 10000) has occurred while \output is active [2849] [2850] [2851] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed), intent (in), optional \T1/pcr/m/sl/8 read[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb), intent (in), optional \T1/pcr/m/sl/8 read[]_[] [2852] [2853] Underfull \vbox (badness 10000) has occurred while \output is active [2854] Underfull \vbox (badness 10000) has occurred while \output is active [2855] Underfull \vbox (badness 10000) has occurred while \output is active [2856] Underfull \vbox (badness 10000) has occurred while \output is active [2857] Underfull \vbox (badness 10000) has occurred while \output is active [2858]) (./namespacemom__tracer__initialization__from__z.tex [2859] Underfull \vbox (badness 10000) has occurred while \output is active [2860] [2861]) (./namespacemom__tracer__registry.tex Underfull \vbox (badness 10000) has occurred while \output is active [2862] [2863] Package longtable Warning: Column widths have changed (longtable) in table 47.1450 on input line 94. Underfull \vbox (badness 10000) has occurred while \output is active [2864] Package longtable Warning: Column widths have changed (longtable) in table 47.1451 on input line 144. [2865] [2866] Package longtable Warning: Column widths have changed (longtable) in table 47.1453 on input line 272. [2867] Package longtable Warning: Column widths have changed (longtable) in table 47.1454 on input line 332. [2868] Package longtable Warning: Column widths have changed (longtable) in table 47.1455 on input line 378. [2869] [2870] [2871] Underfull \vbox (badness 10000) has occurred while \output is active [2872] [2873] Package longtable Warning: Column widths have changed (longtable) in table 47.1457 on input line 709. [2874] Underfull \vbox (badness 10000) has occurred while \output is active [2875] Underfull \vbox (badness 10000) has occurred while \output is active [2876] Underfull \vbox (badness 10000) has occurred while \output is active [2877] Package longtable Warning: Column widths have changed (longtable) in table 47.1458 on input line 1072. [2878] [2879]) (./namespacemom__tracer__z__init.tex [2880] [2881] Underfull \vbox (badness 10000) has occurred while \output is active [2882] Package longtable Warning: Column widths have changed (longtable) in table 47.1462 on input line 201. Underfull \hbox (badness 10000) detected at line 202 [][][] [2883] Package longtable Warning: Column widths have changed (longtable) in table 47.1463 on input line 273. [2884] [2885] [2886] [2887] Underfull \hbox (badness 10000) detected at line 505 [][][] [2888] Underfull \vbox (badness 10000) has occurred while \output is active [2889] Underfull \vbox (badness 10000) has occurred while \output is active [2890] [2891] [2892]) (./namespacemom__transcribe__grid.tex [2893] Package longtable Warning: Column widths have changed (longtable) in table 47.1467 on input line 36. [2894] Underfull \vbox (badness 10000) has occurred while \output is active [2895] Package longtable Warning: Column widths have changed (longtable) in table 47.1468 on input line 200. [2896] Underfull \vbox (badness 10000) has occurred while \output is active [2897] Package longtable Warning: Column widths have changed (longtable) in table 47.1469 on input line 363. [2898]) (./namespacemom__transform__fms.tex [2899] [2900] Package longtable Warning: Column widths have changed (longtable) in table 47.1470 on input line 81. ) (./namespacemom__unit__scaling.tex [2901] Package longtable Warning: Column widths have changed (longtable) in table 47.1471 on input line 37. [2902] [2903]) (./namespacemom__unit__tests.tex [2904]) (./namespacemom__variables.tex [2905] [2906] [2907] [2908] [2909] Package longtable Warning: Column widths have changed (longtable) in table 47.1479 on input line 318. [2910]) (./namespacemom__vert__friction.tex Underfull \hbox (badness 10000) detected at line 8 [][][] Underfull \hbox (badness 10000) detected at line 11 [][][] [2911] [2912] [2913] Underfull \vbox (badness 10000) has occurred while \output is active [2914] Underfull \vbox (badness 10000) has occurred while \output is active [2915] Underfull \vbox (badness 10000) has occurred while \output is active [2916] Package longtable Warning: Column widths have changed (longtable) in table 47.1481 on input line 408. [2917] [2918] [2919] Underfull \vbox (badness 10000) has occurred while \output is active [2920] Underfull \vbox (badness 10000) has occurred while \output is active [2921] Underfull \vbox (badness 10000) has occurred while \output is active [2922] [2923] Package longtable Warning: Column widths have changed (longtable) in table 47.1483 on input line 882. [2924] Underfull \vbox (badness 10000) has occurred while \output is active [2925] Underfull \vbox (badness 10000) has occurred while \output is active [2926] Underfull \vbox (badness 10000) has occurred while \output is active [2927] Underfull \vbox (badness 10000) has occurred while \output is active [2928] Underfull \vbox (badness 10000) has occurred while \output is active [2929] [2930] [2931] Underfull \vbox (badness 10000) has occurred while \output is active [2932] Underfull \vbox (badness 10000) has occurred while \output is active [2933] [2934] Package longtable Warning: Column widths have changed (longtable) in table 47.1486 on input line 1733. [2935] Underfull \vbox (badness 10000) has occurred while \output is active [2936] Underfull \vbox (badness 10000) has occurred while \output is active [2937] Underfull \hbox (badness 10000) in paragraph at lines 1952--1953 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, gv %ke) , intent(inout) \T1/pcr/m/sl/8 visc[]_[] [2938] Underfull \vbox (badness 10000) has occurred while \output is active [2939]) (./namespacemom__verticalgrid.tex [2940] Package longtable Warning: Column widths have changed (longtable) in table 47.1488 on input line 45. Underfull \hbox (badness 10000) detected at line 66 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1489 on input line 73. Underfull \hbox (badness 10000) detected at line 102 [][][] [2941] Package longtable Warning: Column widths have changed (longtable) in table 47.1490 on input line 109. Underfull \hbox (badness 10000) detected at line 138 [][][] [2942] Package longtable Warning: Column widths have changed (longtable) in table 47.1492 on input line 229. [2943] [2944] [2945]) (./namespacemom__wave__interface.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [2946] [2947] [2948] Package longtable Warning: Column widths have changed (longtable) in table 47.1495 on input line 144. Underfull \vbox (badness 10000) has occurred while \output is active [2949] Package longtable Warning: Column widths have changed (longtable) in table 47.1496 on input line 211. Underfull \vbox (badness 10000) has occurred while \output is active [2950] [2951] [2952] [2953] [2954] [2955] [2956] [2957] [2958] Underfull \vbox (badness 10000) has occurred while \output is active [2959] Underfull \vbox (badness 10000) has occurred while \output is active [2960] [2961] Package longtable Warning: Column widths have changed (longtable) in table 47.1503 on input line 996. [2962] [2963] Underfull \vbox (badness 10000) has occurred while \output is active [2964] Package longtable Warning: Column widths have changed (longtable) in table 47.1505 on input line 1278. [2965] Underfull \vbox (badness 10000) has occurred while \output is active [2966] Underfull \vbox (badness 10000) has occurred while \output is active [2967] [2968] Package longtable Warning: Column widths have changed (longtable) in table 47.1506 on input line 1536. [2969] Package longtable Warning: Column widths have changed (longtable) in table 47.1507 on input line 1601. [2970] [2971] [2972] [2973] [2974] [2975] [2976] [2977] [2978] [2979]) (./namespacemom__wave__speed.tex [2980] Package longtable Warning: Column widths have changed (longtable) in table 47.1509 on input line 51. Underfull \vbox (badness 10000) has occurred while \output is active [2981] [2982] Underfull \hbox (badness 10000) in paragraph at lines 183--184 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [2983] [2984] Underfull \vbox (badness 10000) has occurred while \output is active [2985] Underfull \vbox (badness 10000) has occurred while \output is active [2986] Underfull \vbox (badness 10000) has occurred while \output is active [2987] Underfull \vbox (badness 10000) has occurred while \output is active [2988] Underfull \vbox (badness 10000) has occurred while \output is active [2989] Underfull \vbox (badness 10000) has occurred while \output is active [2990] Overfull \vbox (20.3618pt too high) has occurred while \output is active [2991] [2992] [2993] [2994] Underfull \vbox (badness 10000) has occurred while \output is active [2995] Underfull \vbox (badness 10000) has occurred while \output is active [2996] Underfull \vbox (badness 10000) has occurred while \output is active [2997] Underfull \vbox (badness 10000) has occurred while \output is active [2998] Underfull \vbox (badness 10000) has occurred while \output is active [2999]) (./namespacemom__wave__structure.tex [3000] Package longtable Warning: Column widths have changed (longtable) in table 47.1515 on input line 49. [3001] Underfull \vbox (badness 10000) has occurred while \output is active [3002] [3003] [3004] Underfull \vbox (badness 10000) has occurred while \output is active [3005] Underfull \vbox (badness 10000) has occurred while \output is active [3006] Underfull \vbox (badness 10000) has occurred while \output is active [3007] Underfull \vbox (badness 10000) has occurred while \output is active [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] [3010]) (./namespacemom__write__cputime.tex [3011] [3012] [3013] [3014]) (./namespaceneverworld__initialization.tex [3015] [3016] Package longtable Warning: Column widths have changed (longtable) in table 47.1523 on input line 105. [3017] Package longtable Warning: Column widths have changed (longtable) in table 47.1525 on input line 176. Overfull \vbox (66.35884pt too high) has occurred while \output is active [3018] Package longtable Warning: Column widths have changed (longtable) in table 47.1526 on input line 217. [3019] Package longtable Warning: Column widths have changed (longtable) in table 47.1527 on input line 258. Package longtable Warning: Column widths have changed (longtable) in table 47.1528 on input line 300. Overfull \vbox (59.03142pt too high) has occurred while \output is active [3020] [3021] Overfull \vbox (35.34378pt too high) has occurred while \output is active [3022] [3023] Package longtable Warning: Column widths have changed (longtable) in table 47.1531 on input line 524. Package longtable Warning: Column widths have changed (longtable) in table 47.1532 on input line 569. Underfull \vbox (badness 10000) has occurred while \output is active [3024] Package longtable Warning: Column widths have changed (longtable) in table 47.1533 on input line 606. [3025]) (./namespaceocean__da__core__mod.tex Overfull \vbox (24.63379pt too high) has occurred while \output is active [3026]) (./namespaceocean__da__types__mod.tex [3027]) (./namespaceocean__model__mod.tex [3028] [3029] [3030] [3031] [3032] Package longtable Warning: Column widths have changed (longtable) in table 47.1540 on input line 316. [3033] Package longtable Warning: Column widths have changed (longtable) in table 47.1541 on input line 365. [3034] [3035] Package longtable Warning: Column widths have changed (longtable) in table 47.1544 on input line 532. [3036] [3037] [3038] Underfull \vbox (badness 10000) has occurred while \output is active [3039] [3040] [3041] [3042] [3043] [3044] [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] Underfull \vbox (badness 10000) has occurred while \output is active [3047]) (./namespaceoil__tracer.tex [3048] [3049] [3050] [3051] Underfull \hbox (badness 10000) detected at line 201 [][][] [3052] [3053] Underfull \vbox (badness 10000) has occurred while \output is active [3054] [3055] Overfull \vbox (55.07356pt too high) has occurred while \output is active [3056] [3057]) (./namespacep1m__functions.tex [3058] [3059] [3060] [3061]) (./namespacep3m__functions.tex [3062] Overfull \vbox (44.4672pt too high) has occurred while \output is active [3063] [3064] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] Package longtable Warning: Column widths have changed (longtable) in table 47.1562 on input line 185. [3065] Underfull \vbox (badness 10000) has occurred while \output is active [3066] [3067] [3068] Underfull \vbox (badness 10000) has occurred while \output is active [3069] [3070] Overfull \vbox (8.10031pt too high) has occurred while \output is active [3071] [3072]) (./namespacePCM__functions.tex) (./namespacepcm__functions.tex [3073]) (./namespacephillips__initialization.tex [3074] [3075] [3076] [3077] [3078] [3079] [3080] Underfull \hbox (badness 10000) detected at line 454 [][][] ) (./namespaceplm__functions.tex [3081] [3082] [3083] [3084] Package longtable Warning: Column widths have changed (longtable) in table 47.1574 on input line 178. [3085] [3086] [3087] [3088]) (./namespacepolynomial__functions.tex [3089] Package longtable Warning: Column widths have changed (longtable) in table 47.1578 on input line 42. [3090] Package longtable Warning: Column widths have changed (longtable) in table 47.1579 on input line 84. [3091] Package longtable Warning: Column widths have changed (longtable) in table 47.1580 on input line 128. ) (./namespaceppm__functions.tex [3092] [3093] Underfull \vbox (badness 10000) has occurred while \output is active [3094] [3095] [3096] [3097] Underfull \hbox (badness 10000) detected at line 378 [][][] ) (./namespacepqm__functions.tex [3098] [3099] Underfull \vbox (badness 10000) has occurred while \output is active [3100] [3101] [3102] Underfull \vbox (badness 10000) has occurred while \output is active [3103] Underfull \vbox (badness 10000) has occurred while \output is active [3104] Underfull \vbox (badness 10000) has occurred while \output is active [3105] [3106] Underfull \vbox (badness 10000) has occurred while \output is active [3107] Underfull \vbox (badness 10000) has occurred while \output is active [3108] Underfull \vbox (badness 10000) has occurred while \output is active [3109] [3110]) (./namespacepseudo__salt__tracer.tex [3111] Overfull \vbox (50.21103pt too high) has occurred while \output is active [3112] [3113] Underfull \hbox (badness 10000) detected at line 157 [][][] [3114] [3115] [3116] [3117] [3118]) (./namespaceregional__dyes.tex [3119] Underfull \hbox (badness 10000) detected at line 60 [][][] [3120] [3121] [3122] [3123] [3124] [3125] [3126] Underfull \vbox (badness 10000) has occurred while \output is active [3127]) (./namespaceregrid__consts.tex [3128] Underfull \hbox (badness 10000) detected at line 102 [][][] [3129] Package longtable Warning: Column widths have changed (longtable) in table 47.1600 on input line 109. Underfull \hbox (badness 10000) detected at line 143 [][][] [3130] Underfull \hbox (badness 10000) detected at line 182 [][][] Package longtable Warning: Column widths have changed (longtable) in table 47.1602 on input line 189. Package longtable Warning: Column widths have changed (longtable) in table 47.1603 on input line 216. [3131] Package longtable Warning: Column widths have changed (longtable) in table 47.1604 on input line 242. ) (./namespaceregrid__edge__values.tex [3132] [3133] [3134] [3135] [3136] [3137] Underfull \vbox (badness 10000) has occurred while \output is active [3138] [3139] Underfull \vbox (badness 10000) has occurred while \output is active [3140] Underfull \vbox (badness 10000) has occurred while \output is active [3141] [3142] [3143] [3144] Underfull \vbox (badness 10000) has occurred while \output is active [3145] Underfull \vbox (badness 10000) has occurred while \output is active [3146] [3147] Underfull \vbox (badness 10000) has occurred while \output is active [3148] Underfull \vbox (badness 10000) has occurred while \output is active [3149] [3150] Underfull \vbox (badness 10000) has occurred while \output is active [3151] Package longtable Warning: Column widths have changed (longtable) in table 47.1614 on input line 1422. [3152] Underfull \vbox (badness 10000) has occurred while \output is active [3153] Package longtable Warning: Column widths have changed (longtable) in table 47.1615 on input line 1571. [3154] [3155] Package longtable Warning: Column widths have changed (longtable) in table 47.1616 on input line 1660. [3156] [3157] Package longtable Warning: Column widths have changed (longtable) in table 47.1617 on input line 1727. ) (./namespaceregrid__interp.tex [3158] [3159] [3160] [3161] Underfull \hbox (badness 10000) detected at line 197 [][][] [3162] Underfull \vbox (badness 10000) has occurred while \output is active [3163] [3164] [3165] [3166] Underfull \vbox (badness 10000) has occurred while \output is active [3167] Underfull \vbox (badness 10000) has occurred while \output is active [3168] Package longtable Warning: Column widths have changed (longtable) in table 47.1623 on input line 720. [3169]) (./namespaceregrid__solvers.tex [3170] Package longtable Warning: Column widths have changed (longtable) in table 47.1625 on input line 46. [3171] Package longtable Warning: Column widths have changed (longtable) in table 47.1626 on input line 133. [3172] [3173] Underfull \vbox (badness 10000) has occurred while \output is active [3174] [3175]) (./namespacergc__tracer.tex [3176] [3177] Underfull \vbox (badness 10000) has occurred while \output is active [3178] [3179] [3180] [3181]) (./namespacerossby__front__2d__initialization.tex [3182] [3183] Package longtable Warning: Column widths have changed (longtable) in table 47.1633 on input line 64. Package longtable Warning: Column widths have changed (longtable) in table 47.1634 on input line 100. Underfull \vbox (badness 10000) has occurred while \output is active [3184] [3185] [3186] [3187] [3188] Package longtable Warning: Column widths have changed (longtable) in table 47.1638 on input line 411. ) (./namespacescm__cvmix__tests.tex [3189] [3190] [3191] [3192] [3193] [3194]) (./namespaceseamount__initialization.tex [3195] [3196] [3197] [3198] Overfull \vbox (27.34378pt too high) has occurred while \output is active [3199]) (./namespaceshelfwave__initialization.tex [3200] [3201] [3202] Package longtable Warning: Column widths have changed (longtable) in table 47.1649 on input line 204. [3203]) (./namespacesloshing__initialization.tex [3204] [3205] [3206] [3207] [3208]) (./namespacesoliton__initialization.tex [3209] Package longtable Warning: Column widths have changed (longtable) in table 47.1653 on input line 45. [3210] Package longtable Warning: Column widths have changed (longtable) in table 47.1654 on input line 106. ) (./namespacesupercritical__initialization.tex [3211] Underfull \hbox (badness 3590) in paragraph at lines 8--8 []\T1/phv/m/n/10 The mod-ule con-fig-ures the model for the "su-per-crit-i-cal" ex-per-i-ment. [][]\T1/pcr/m/n/10 https[]://marine.[]rutgers.[] [3212]) (./namespacetidal__bay__initialization.tex [3213] Underfull \vbox (badness 10000) has occurred while \output is active [3214] Package longtable Warning: Column widths have changed (longtable) in table 47.1658 on input line 115. [3215]) (./namespacetidal__forcing.tex) (./namespaceuser__change__diffusivity.tex [3216] Package longtable Warning: Column widths have changed (longtable) in table 47.1659 on input line 41. Underfull \hbox (badness 10000) detected at line 42 [][][] [3217] [3218] Underfull \vbox (badness 10000) has occurred while \output is active [3219] [3220] [3221] Package longtable Warning: Column widths have changed (longtable) in table 47.1663 on input line 347. Underfull \hbox (badness 10000) detected at line 348 [][][] ) (./namespaceuser__initialization.tex [3222] [3223] Overfull \vbox (51.4922pt too high) has occurred while \output is active [3224] [3225] [3226] [3227] [3228] Underfull \vbox (badness 10000) has occurred while \output is active [3229] [3230]) (./namespaceuser__revise__forcing.tex [3231] [3232]) (./namespaceuser__shelf__init.tex [3233] [3234] [3235] [3236] [3237] [3238]) (./namespaceuser__surface__forcing.tex [3239] [3240] Underfull \vbox (badness 10000) has occurred while \output is active [3241] [3242] [3243]) (./namespaceuser__tracer__example.tex [3244] [3245] Package longtable Warning: Column widths have changed (longtable) in table 47.1682 on input line 73. [3246] [3247] [3248] [3249] [3250] [3251] Underfull \hbox (badness 10000) detected at line 496 [][][] [3252]) (./namespacewrite__ocean__obs__mod.tex [3253] Package longtable Warning: Column widths have changed (longtable) in table 47.1688 on input line 35. [3254] Package longtable Warning: Column widths have changed (longtable) in table 47.1689 on input line 70. Package longtable Warning: Column widths have changed (longtable) in table 47.1690 on input line 102. ) [3255] [3256] Chapter 48. (./structmom__variables_1_1accel__diag__ptrs.tex [3257 <./structmom__variables_ 1_1accel__diag__ptrs__coll__graph.pdf>]) (./structcoord__adapt_1_1adapt__cs.tex [3258] [3259 <./structcoord__adapt_1_1adapt__cs__coll__graph.pdf>]) (./structadvection__test__tracer_1_1advection__test__tracer__cs.tex [3260 <./st ructadvection__test__tracer_1_1advection__test__tracer__cs__coll__graph.pdf>]) (./structmom__ale_1_1ale__cs.tex [3261] [3262 <./structmom__ale_1_1ale__cs__col l__graph.pdf>]) (./structmom__ale__sponge_1_1ale__sponge__cs.tex [3263] [3264 <./structmom__ale__sponge_1_1ale__sponge__cs__coll__graph.pdf>] [3265]) (./interfacemom__forcing__type_1_1allocate__forcing__type.tex [3266] [3267] [3268]) (./interfacemom__forcing__type_1_1allocate__mech__forcing.tex [3269] Package longtable Warning: Column widths have changed (longtable) in table 48.3 on input line 53. [3270]) (./interfacemom__array__transform_1_1allocate__rotated__array.tex [3271] Package longtable Warning: Column widths have changed (longtable) in table 48.5 on input line 51. Overfull \vbox (25.74976pt too high) has occurred while \output is active [3272] Package longtable Warning: Column widths have changed (longtable) in table 48.6 on input line 93. [3273] Package longtable Warning: Column widths have changed (longtable) in table 48.7 on input line 136. Package longtable Warning: Column widths have changed (longtable) in table 48.8 on input line 179. Overfull \vbox (6.44917pt too high) has occurred while \output is active [3274]) (./interfacemom__hor__index_1_1assignment_07_0A_08.tex [3275] Package longtable Warning: Column widths have changed (longtable) in table 48.9 on input line 41. ) (./interfacemom__coms_1_1assignment_07_0A_08.tex [3276] Package longtable Warning: Column widths have changed (longtable) in table 48.10 on input line 41. ) (./structmom__tidal__forcing_1_1astro__longitudes.tex [3277]) (./structmom__diag__mediator_1_1axes__grp.tex [3278 <./structmom__tidal__forcin g_1_1astro__longitudes__coll__graph.pdf>] [3279 <./structmom__diag__mediator_1_ 1axes__grp__coll__graph.pdf>] [3280]) (./structmom__barotropic_1_1barotropic__cs.tex Underfull \vbox (badness 10000) has occurred while \output is active [3281] [3282 <./structmom__barotropic_1_1barotropic__cs__coll__graph.pdf>] [3283] [3284] [3285] [3286] [3287] [3288]) (./interfacemom__checksums_1_1bchksum.tex [3289] [3290] Underfull \vbox (badness 10000) has occurred while \output is active [3291] [3292] [3293] Underfull \vbox (badness 10000) has occurred while \output is active [3294]) (./interfacemom__checksums_1_1bchksum__pair.tex [3295] [3296] [3297]) (./structbfb__surface__forcing_1_1bfb__surface__forcing__cs.tex [3298] [3299 <. /structbfb__surface__forcing_1_1bfb__surface__forcing__cs__coll__graph.pdf>]) (./structmom__bkgnd__mixing_1_1bkgnd__mixing__cs.tex [3300 <./structmom__bkgnd_ _mixing_1_1bkgnd__mixing__cs__coll__graph.pdf>] [3301]) (./structboundary__impulse__tracer_1_1boundary__impulse__tracer__cs.tex [3302] [3303 <./structboundary__impulse__tracer_1_1boundary__impulse__tracer__c s__coll__graph.pdf>]) (./structmom__variables_1_1bt__cont__type.tex [3304] [3305 <./structmom__variables_1_1bt__cont__type__coll__graph.pdf>]) (./structmom__barotropic_1_1bt__obc__type.tex [3306] [3307 <./structmom__barotr opic_1_1bt__obc__type__coll__graph.pdf>]) (./structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs.tex [3308] [3309 <./stru ctmom__bulk__mixed__layer_1_1bulkmixedlayer__cs__coll__graph.pdf>] [3310] [3311]) (./interfacemom__eos_1_1calculate__compress.tex [3312] Package longtable Warning: Column widths have changed (longtable) in table 48.15 on input line 55. Underfull \vbox (badness 10000) has occurred while \output is active [3313] [3314]) (./interfacemom__eos_1_1calculate__density.tex [3315] Overfull \vbox (80.42377pt too high) has occurred while \output is active [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324]) (./interfacemom__eos_1_1calculate__density__derivs.tex [3325] [3326] [3327] Overfull \vbox (39.68802pt too high) has occurred while \output is active [3328]) (./interfacemom__eos__linear_1_1calculate__density__derivs__linear.tex [3329] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]linear [3330] Underfull \hbox (badness 10000) in paragraph at lines 94--95 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]linear [3331]) (./interfacemom__eos__nemo_1_1calculate__density__derivs__nemo.tex [3332] [3333]) (./interfacemom__eos__teos10_1_1calculate__density__derivs__teos10.tex [3334] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]teos10 [3335] Underfull \hbox (badness 10000) in paragraph at lines 92--93 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]teos10 [3336]) (./interfacemom__eos__wright_1_1calculate__density__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]wright [3337] [3338] Underfull \hbox (badness 10000) in paragraph at lines 95--96 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]wright [3339]) (./interfacemom__eos__linear_1_1calculate__density__linear.tex [3340] [3341]) (./interfacemom__eos__nemo_1_1calculate__density__nemo.tex [3342] [3343] Overfull \vbox (10.06525pt too high) has occurred while \output is active [3344]) (./interfacemom__eos_1_1calculate__density__second__derivs.tex [3345] [3346] [3347] [3348]) (./interfacemom__eos__linear_1_1calculate__density__second__derivs__linear.tex [3349] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] [3350] Underfull \hbox (badness 10000) in paragraph at lines 96--97 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] [3351]) (./interfacemom__eos__teos10_1_1calculate__density__second__derivs__teos10.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [3352] [3353] Underfull \hbox (badness 10000) in paragraph at lines 101--102 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [3354]) (./interfacemom__eos__wright_1_1calculate__density__second__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [3355] [3356] Underfull \hbox (badness 10000) in paragraph at lines 120--121 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [3357]) (./interfacemom__eos__teos10_1_1calculate__density__teos10.tex [3358] [3359]) (./interfacemom__eos__unesco_1_1calculate__density__unesco.tex [3360] [3361] Overfull \vbox (42.16423pt too high) has occurred while \output is active [3362]) (./interfacemom__eos__wright_1_1calculate__density__wright.tex [3363] [3364]) (./interfacemom__eos_1_1calculate__spec__vol.tex [3365] [3366] [3367] [3368] [3369]) (./interfacemom__eos__linear_1_1calculate__spec__vol__linear.tex [3370] [3371]) (./interfacemom__eos__teos10_1_1calculate__spec__vol__teos10.tex [3372] [3373] [3374]) (./interfacemom__eos__unesco_1_1calculate__spec__vol__unesco.tex [3375] [3376] Underfull \vbox (badness 10000) has occurred while \output is active [3377]) (./interfacemom__eos__wright_1_1calculate__spec__vol__wright.tex [3378] [3379]) (./interfacemom__eos_1_1calculate__specific__vol__derivs.tex [3380] Underfull \vbox (badness 10000) has occurred while \output is active [3381] [3382]) (./interfacemom__eos_1_1calculate__tfreeze.tex [3383] Overfull \vbox (50.59338pt too high) has occurred while \output is active [3384] Overfull \vbox (45.06868pt too high) has occurred while \output is active [3385]) (./interfacemom__tfreeze_1_1calculate__tfreeze__linear.tex [3386] [3387]) (./interfacemom__tfreeze_1_1calculate__tfreeze__millero.tex [3388] [3389] Package longtable Warning: Column widths have changed (longtable) in table 48.69 on input line 49. Package longtable Warning: Column widths have changed (longtable) in table 48.70 on input line 91. [3390]) (./interfacemom__tfreeze_1_1calculate__tfreeze__teos10.tex [3391] Package longtable Warning: Column widths have changed (longtable) in table 48.71 on input line 49. Package longtable Warning: Column widths have changed (longtable) in table 48.72 on input line 97. [3392]) (./interfacemom__debugging_1_1check__redundant.tex [3393] [3394] [3395] [3396]) (./interfacemom__debugging_1_1check__redundant__b.tex [3397] Package longtable Warning: Column widths have changed (longtable) in table 48.75 on input line 57. [3398] Package longtable Warning: Column widths have changed (longtable) in table 48.76 on input line 145. [3399] [3400] [3401]) (./interfacemom__debugging_1_1check__redundant__c.tex [3402] Overfull \vbox (103.58171pt too high) has occurred while \output is active [3403] [3404]) (./interfacemom__debugging_1_1check__redundant__t.tex [3405] [3406] Package longtable Warning: Column widths have changed (longtable) in table 48.81 on input line 57. [3407] Package longtable Warning: Column widths have changed (longtable) in table 48.82 on input line 131. [3408] [3409] [3410]) (./interfacemom__checksums_1_1chk__sum__msg.tex [3411] Package longtable Warning: Column widths have changed (longtable) in table 48.85 on input line 51. Package longtable Warning: Column widths have changed (longtable) in table 48.86 on input line 88. [3412] Package longtable Warning: Column widths have changed (longtable) in table 48.87 on input line 128. [3413] Package longtable Warning: Column widths have changed (longtable) in table 48.88 on input line 176. ) (./interfacemom__checksums_1_1chksum.tex [3414] [3415] [3416]) (./interfacemom__domains_1_1clone__mom__domain.tex [3417] [3418] [3419] [3420] Underfull \vbox (badness 10000) has occurred while \output is active [3421]) (./structmom__variables_1_1cont__diag__ptrs.tex Underfull \vbox (badness 1902) has occurred while \output is active [3422]) (./structmom__continuity_1_1continuity__cs.tex [3423 <./structmom__variables_1_ 1cont__diag__ptrs__coll__graph.pdf>] [3424 <./structmom__continuity_1_1continui ty__cs__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1continuity__ppm__cs.tex [3425 <./structmom__co ntinuity__ppm_1_1continuity__ppm__cs__coll__graph.pdf>]) (./interfaceregrid__consts_1_1coordinateunits.tex [3426] Underfull \hbox (badness 10000) detected at line 37 [][][] [3427] Underfull \hbox (badness 10000) detected at line 76 [][][] Package longtable Warning: Column widths have changed (longtable) in table 48.95 on input line 83. ) (./structmom__coriolisadv_1_1coriolisadv__cs.tex [3428] [3429 <./structmom__c oriolisadv_1_1coriolisadv__cs__coll__graph.pdf>] [3430]) (./interfacemom__domains_1_1create__group__pass.tex [3431] [3432] [3433] [3434] [3435] [3436] [3437]) (./structmom__controlled__forcing_1_1ctrl__forcing__cs.tex [3438 <./structmom__ controlled__forcing_1_1ctrl__forcing__cs__coll__graph.pdf>] [3439] [3440] [3441]) (./structmom__cvmix__conv_1_1cvmix__conv__cs.tex [3442 <./structmom__cv mix__conv_1_1cvmix__conv__cs__coll__graph.pdf>]) (./structmom__cvmix__ddiff_1_1cvmix__ddiff__cs.tex [3443] [3444 <./structmom__c vmix__ddiff_1_1cvmix__ddiff__cs__coll__graph.pdf>]) (./structmom__cvmix__shear_1_1cvmix__shear__cs.tex [3445 <./structmom__cvmix__s hear_1_1cvmix__shear__cs__coll__graph.pdf>]) (./structmom__sum__output_1_1depth__list.tex [3446] [3447 <./structmom__sum__ou tput_1_1depth__list__coll__graph.pdf>]) (./structmom__diabatic__aux_1_1diabatic__aux__cs.tex [3448 <./structmom__diabat ic__aux_1_1diabatic__aux__cs__coll__graph.pdf>]) (./structmom__diabatic__driver_1_1diabatic__cs.tex [3449] Underfull \vbox (badness 10000) has occurred while \output is active [3450] [3451 <./structmom__diabatic__driver_1_1diabatic__cs__coll__graph.pdf>] [3452] [3453] [3454] [3455] [3456]) (./structmom__diag__mediator_1_1diag__ctrl.tex [3457] [3458 <./structmom__diag_ _mediator_1_1diag__ctrl__coll__graph.pdf>] [3459] [3460] [3461]) (./structmom__diag__mediator_1_1diag__dsamp.tex) (./structmom__diag__mediator_1_1diag__grid__storage.tex [3462 <./structmom__dia g__mediator_1_1diag__dsamp__coll__graph.pdf>] [3463 <./structmom__diag__mediato r_1_1diag__grid__storage__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__grids__type.tex) (./structmom__diag__remap_1_1diag__remap__ctrl.tex [3464 <./structmom__diag__me diator_1_1diag__grids__type__coll__graph.pdf>] [3465 <./structmom__diag__remap_ 1_1diag__remap__ctrl__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__type.tex [3466] [3467 <./structmom__diag_ _mediator_1_1diag__type__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diagcs__dsamp.tex [3468] [3469 <./structmom__di ag__mediator_1_1diagcs__dsamp__coll__graph.pdf>] [3470]) (./structmom__diagnostics_1_1diagnostics__cs.tex [3471] [3472 <./structmom__dia gnostics_1_1diagnostics__cs__coll__graph.pdf>] [3473] [3474] [3475]) (./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs.tex [3476] [3477 <./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs__coll__graph .pdf>]) (./structmom__set__diffusivity_1_1diffusivity__diags.tex [3478] [3479 <./structmom__set__diffusivity_1_1diffusivity__diags__coll__graph.pdf>]) (./structmom__get__input_1_1directories.tex [3480 <./structmom__get__input_1_1d irectories__coll__graph.pdf>]) (./interfacemom__document_1_1doc__param.tex [3481] [3482] Underfull \vbox (badness 10000) has occurred while \output is active [3483] [3484] [3485] [3486] [3487] [3488] [3489] [3490] [3491]) (./structmom__document_1_1doc__type.tex [3492 <./structmom__document_1_1doc__ty pe__coll__graph.pdf>]) (./structdome__tracer_1_1dome__tracer__cs.tex [3493] [3494 <./structdome__tracer_1_1dome__tracer__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1downsample__diag__field.tex [3495] [3496] [3497]) (./interfacemom__diag__mediator_1_1downsample__field.tex [3498] Underfull \vbox (badness 10000) has occurred while \output is active [3499] [3500] [3501]pdfTeX warning (ext4): destination with the same identifier (name{ namespacemom__diag__mediator_downsampling}) has been already used, duplicate ig nored \relax l.229 ...espacemom__diag__mediator_downsampling}{} \subsection{The down sampl... [3502] Overfull \hbox (36.1684pt too wide) in paragraph at lines 318--318 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [3503] Underfull \vbox (badness 10000) has occurred while \output is active [3504]) (./interfacemom__diag__mediator_1_1downsample__mask.tex [3505] [3506] [3507]) (./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs.tex Underfull \vbox (badness 3590) has occurred while \output is active [3508] [3509 <./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs__co ll__graph.pdf>]) (./structregional__dyes_1_1dye__tracer__cs.tex [3510 <./struct regional__dyes_1_1dye__tracer__cs__coll__graph.pdf>]) (./structdyed__channel__initialization_1_1dyed__channel__obc__cs.tex [3511]) (./structdyed__obc__tracer_1_1dyed__obc__tracer__cs.tex [3512 <./structdyed__ch annel__initialization_1_1dyed__channel__obc__cs__coll__graph.pdf>] [3513 <./str uctdyed__obc__tracer_1_1dyed__obc__tracer__cs__coll__graph.pdf>]) (./structmom__dyn__horgrid_1_1dyn__horgrid__type.tex [3514 <./structmom__dyn__h orgrid_1_1dyn__horgrid__type__coll__graph.pdf>] [3515] [3516] [3517] [3518]) (./interfacemom__coms_1_1efp__sum__across__pes.tex [3519] Package longtable Warning: Column widths have changed (longtable) in table 48.115 on input line 45. [3520] Package longtable Warning: Column widths have changed (longtable) in table 48.116 on input line 115. [3521]) (./structmom__coms_1_1efp__type.tex) (./structmom__energetic__pbl_1_1energetic__pbl__cs.tex [3522 <./structmom__coms _1_1efp__type__coll__graph.pdf>] [3523 <./structmom__energetic__pbl_1_1energeti c__pbl__cs__coll__graph.pdf>] [3524] [3525] [3526]) (./structmom__entrain__diffusive_1_1entrain__diffusive__cs.tex [3527 <./structm om__entrain__diffusive_1_1entrain__diffusive__cs__coll__graph.pdf>]) (./structmom__eos_1_1eos__type.tex [3528] [3529 <./structmom__eos_1_1eos__type_ _coll__graph.pdf>]) (./structmom__energetic__pbl_1_1epbl__column__diags.tex [3530 <./structmom__energetic__pbl_1_1epbl__column__diags__coll__graph.pdf>]) (./structmom__restart_1_1field__restart.tex [3531]) (./structmom__file__parser_1_1file__data__type.tex [3532 <./structmom__restart_ 1_1field__restart__coll__graph.pdf>]) (./interfacemom__io_1_1file__exists.tex [3533 <./structmom__file__parser_1_1file__data__type__coll__graph.pdf>] [3534]) (./structmom__open__boundary_1_1file__obc__cs.tex [3535]) (./interfacemom__horizontal__regridding_1_1fill__boundaries.tex [3536 <./struct mom__open__boundary_1_1file__obc__cs__coll__graph.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 71--72 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [3537]) (./interfacemom__domains_1_1fill__symmetric__edges.tex [3538] [3539] Underfull \vbox (badness 10000) has occurred while \output is active [3540]) (./interfacemom__interface__heights_1_1find__eta.tex [3541] [3542] [3543] [3544]) (./structmom__forcing__type_1_1forcing.tex [3545] [3546 <./structmom__f orcing__type_1_1forcing__coll__graph.pdf>] [3547] [3548]) (./structmom__forcing__type_1_1forcing__diags.tex [3549] [3550 <./structmom__fo rcing__type_1_1forcing__diags__coll__graph.pdf>] [3551] [3552] [3553] [3554]) (./structocean__da__types__mod_1_1forward__operator__type.tex [3555]) (./structg__tracer__utils_1_1g__diag__type.tex [3556 <./structocean__da__types_ _mod_1_1forward__operator__type__coll__graph.pdf>]) (./structg__tracer__utils_1_1g__tracer__common.tex [3557 <./structg__tracer__ut ils_1_1g__diag__type__coll__graph.pdf>] [3558 <./structg__tracer__utils_1_1g__t racer__common__coll__graph.pdf>]) (./interfaceg__tracer__utils_1_1g__tracer__get__pointer.tex [3559] [3560] [3561]) (./interfaceg__tracer__utils_1_1g__tracer__get__values.tex [3562] [3563] Overfull \vbox (58.06468pt too high) has occurred while \output is active [3564] [3565]) (./interfaceg__tracer__utils_1_1g__tracer__set__values.tex [3566] [3567] [3568]) (./structg__tracer__utils_1_1g__tracer__type.tex [3569 <. /structg__tracer__utils_1_1g__tracer__type__coll__graph.pdf>]) (./structmom__geothermal_1_1geothermal__cs.tex [3570]) (./interfacemom__file__parser_1_1get__param.tex [3571 <./structmom__geothermal_ 1_1geothermal__cs__coll__graph.pdf>] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584]) (./structmom__grid__initialize_1_1gps.tex [3585 <./structmom__grid__initialize_ 1_1gps__coll__graph.pdf>]) (./structocean__da__types__mod_1_1grid__type.tex [3586] [3587 <./structocean__da__types__mod_1_1grid__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1hchksum.tex [3588] [3589] Underfull \vbox (badness 10000) has occurred while \output is active [3590] [3591] Underfull \vbox (badness 10000) has occurred while \output is active [3592]) (./interfacemom__checksums_1_1hchksum__pair.tex [3593] [3594] [3595]) (./structmom__hor__index_1_1hor__index__type.tex [3596] [3597 <./structmom__hor __index_1_1hor__index__type__coll__graph.pdf>] [3598]) (./structmom__hor__visc_1_1hor__visc__cs.tex [3599 <./structmom__hor__visc_1_1h or__visc__cs__coll__graph.pdf>] [3600] [3601] [3602] [3603]) (./interfacemom__horizontal__regridding_1_1horiz__interp__and__extrap__tracer.t ex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [3604] [3605] Underfull \vbox (badness 10000) has occurred while \output is active [3606] Underfull \vbox (badness 10000) has occurred while \output is active [3607] Underfull \vbox (badness 10000) has occurred while \output is active [3608] Underfull \hbox (badness 10000) in paragraph at lines 371--372 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [3609] [3610] Underfull \vbox (badness 10000) has occurred while \output is active [3611] Underfull \vbox (badness 10000) has occurred while \output is active [3612] Underfull \vbox (badness 10000) has occurred while \output is active [3613] Underfull \vbox (badness 10000) has occurred while \output is active [3614]) (./structcoord__hycom_1_1hycom__cs.tex [3615 <./structcoord__hycom_1_1hycom__cs __coll__graph.pdf>]) (./structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type.tex [3616 <. /structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type__coll__graph.p df>] [3617]) (./structmom__ice__shelf_1_1ice__shelf__cs.tex Underfull \vbox (badness 1028) has occurred while \output is active [3618] [3619 <./structmom__ice__shelf_1_1ice__shelf__cs__coll__graph.pdf>] [3620] [3621] [3622]) (./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs.tex [3623] [3624 <./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs__coll__g raph.pdf>] [3625] [3626]) (./structmom__ice__shelf__state_1_1ice__shelf__state.tex [3627] [3628 <./struct mom__ice__shelf__state_1_1ice__shelf__state__coll__graph.pdf>]) (./structideal__age__example_1_1ideal__age__tracer__cs.tex [3629 <./structideal __age__example_1_1ideal__age__tracer__cs__coll__graph.pdf>]) (./structidealized__hurricane_1_1idealized__hurricane__cs.tex [3630] [3631 <./s tructidealized__hurricane_1_1idealized__hurricane__cs__coll__graph.pdf>]) (./interfacemom__ale__sponge_1_1initialize__ale__sponge.tex [3632] [3633] [3634] Underfull \vbox (badness 10000) has occurred while \output is active [3635] [3636] [3637] Underfull \vbox (badness 10000) has occurred while \output is active [3638]) (./structmom__internal__tides_1_1int__tide__cs.tex Underfull \vbox (badness 10000) has occurred while \output is active [3639] [3640 <./structmom__internal__tides_1_1int__tide__cs__coll__graph.pdf>] [3641] [3642]) (./structmom__int__tide__input_1_1int__tide__input__cs.tex [3643] [3644 <./structmom__int__tide__input_1_1int__tide__input__cs__coll__grap h.pdf>]) (./structmom__int__tide__input_1_1int__tide__input__type.tex [3645 <./ structmom__int__tide__input_1_1int__tide__input__type__coll__graph.pdf>]) (./structregrid__interp_1_1interp__cs__type.tex [3646 <./structregrid__interp_1 _1interp__cs__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1is__nan.tex [3647] [3648] [3649]) (./structisomip__tracer_1_1isomip__tracer__cs.tex Underfull \vbox (badness 1688) has occurred while \output is active [3650] [3651 <./structisomip__tracer_1_1isomip__tracer__cs__coll__graph.pdf>]) (./structmom__kappa__shear_1_1kappa__shear__cs.tex [3652 <./structmom__kappa__s hear_1_1kappa__shear__cs__coll__graph.pdf>] [3653]) (./structkdtree_1_1kd__root.tex [3654]) (./structkelvin__initialization_1_1kelvin__obc__cs.tex [3655 <./structkdtree_1_ 1kd__root__coll__graph.pdf>]) (./structmom__cvmix__kpp_1_1kpp__cs.tex [3656 <./ structkelvin__initialization_1_1kelvin__obc__cs__coll__graph.pdf>] [3657 <./str uctmom__cvmix__kpp_1_1kpp__cs__coll__graph.pdf>] [3658] [3659] [3660] [3661]) (./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diffusion__cs. tex [3662 <./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diff usion__cs__coll__graph.pdf>] [3663]) (./structmom__document_1_1link__msg.tex [3664 <./structmom__document_1_1link__msg__coll__graph.pdf>]) (./structmom__file__parser_1_1link__parameter.tex [3665 <./structmom__file__par ser_1_1link__parameter__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__u__type.tex [3666 <./structmom__ba rotropic_1_1local__bt__cont__u__type__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__v__type.tex [3667] [3668 <./struct mom__barotropic_1_1local__bt__cont__v__type__coll__graph.pdf>]) (./interfacemom__file__parser_1_1log__param.tex Underfull \hbox (badness 2065) in paragraph at lines 23--24 []\T1/phv/m/n/10 subroutine [][]log[]_[]param[]_[]int[]_[]array[][] (CS, mod-u- le-name, var-name, value, desc, units, de-fault, layout[]Param, [3669] [3670] [3671] [3672] [3673] [3674] [3675] Underfull \vbox (badness 10000) has occurred while \output is active [3676] [3677] [3678]) (./interfacemom__file__parser_1_1log__version.tex [3679] [3680]) (./structmom__ice__shelf__dynamics_1_1loop__bounds__type.tex [3681]) (./structmom__internal__tides_1_1loop__bounds__type.tex [3682 <./structmom__ice __shelf__dynamics_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1loop__bounds__type.tex [3683 <./structmom__int ernal__tides_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__marine__ice_1_1marine__ice__cs.tex [3684 <./structmom__continuity __ppm_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__forcing__type_1_1mech__forcing.tex [3685 <./structmom__marine__ic e_1_1marine__ice__cs__coll__graph.pdf>] [3686 <./structmom__forcing__type_1_1me ch__forcing__coll__graph.pdf>] [3687]) (./structmom__meke_1_1meke__cs.tex [3688 <./structmom__meke_1_1meke__cs__coll__graph.pdf>] [3689] [3690]) (./structmom__meke__types_1_1meke__type.tex [3691] [3692 <./structmom__meke__ty pes_1_1meke__type__coll__graph.pdf>]) (./structmom__barotropic_1_1memory__size__type.tex [3693]) (./structmeso__surface__forcing_1_1meso__surface__forcing__cs.tex [3694 <./stru ctmom__barotropic_1_1memory__size__type__coll__graph.pdf>] [3695 <./structmeso_ _surface__forcing_1_1meso__surface__forcing__cs__coll__graph.pdf>]) (./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs.tex [3696] [3697 <./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs__coll__gra ph.pdf>]) (./structmom_1_1mom__control__struct.tex [3698] Underfull \vbox (badness 10000) has occurred while \output is active [3699] [3700 <./structmom_1_1mom__control__struct__coll__graph.pdf>] [3701] [3702] [3703] [3704]) (./structmom_1_1mom__diag__ids.tex [3705]) (./structmom__domains_1_1mom__domain__type.tex [3706 <./structmom_1_1mom__diag_ _ids__coll__graph.pdf>] [3707 <./structmom__domains_1_1mom__domain__type__coll_ _graph.pdf>]) (./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs.tex [3708] [3709 <./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs__coll__gra ph.pdf>] [3710] [3711] [3712]) (./structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs.tex [3713] [3714 <./st ructmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs__coll__graph.pdf>] [3715]) (./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs.tex [3716] [3717 <./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs__coll_ _graph.pdf>] [3718]) (./structmom__generic__tracer_1_1mom__generic__tracer__cs.tex [3719]) (./interfacemom__io_1_1mom__read__data.tex [3720 <./structmom__generic__tracer_ 1_1mom__generic__tracer__cs__coll__graph.pdf>] [3721] [3722] [3723] [3724]) (./interfacemom__io_1_1mom__read__vector.tex [3725] [3726] [3727]) (./structmom__restart_1_1mom__restart__cs.tex Underfull \vbox (badness 2495) has occurred while \output is active [3728] [3729 <./structmom__restart_1_1mom__restart__cs__coll__graph.pdf>]) (./interfacemom__checksum__packages_1_1mom__state__chksum.tex [3730] [3731] Underfull \vbox (badness 10000) has occurred while \output is active [3732]) (./structmom__neutral__diffusion_1_1neutral__diffusion__cs.tex [3733] [3734 <./ structmom__neutral__diffusion_1_1neutral__diffusion__cs__coll__graph.pdf>] [3735] [3736]) (./structmom__open__boundary_1_1obc__registry__type.tex [3737 <. /structmom__open__boundary_1_1obc__registry__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__data__type.tex [3738 <./structmom __open__boundary_1_1obc__segment__data__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__tracer__type.tex [3739 <./structm om__open__boundary_1_1obc__segment__tracer__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__type.tex [3740] [3741 <./structmo m__open__boundary_1_1obc__segment__type__coll__graph.pdf>] [3742] [3743]) (./structmom__open__boundary_1_1obc__struct__type.tex [3744]) (./structmom__restart_1_1obsolete__restart.tex [3745 <./structmom__open__bounda ry_1_1obc__struct__type__coll__graph.pdf>]) (./structocean__da__types__mod_1_1ocean__control__struct.tex [3746 <./structmom __restart_1_1obsolete__restart__coll__graph.pdf>] [3747 <./structocean__da__typ es__mod_1_1ocean__control__struct__coll__graph.pdf>]) (./structmom__grid_1_1ocean__grid__type.tex [3748 <./structmom__grid_1_1ocean__ grid__type__coll__graph.pdf>] [3749] [3750] [3751] [3752]) (./structmom__variables_1_1ocean__internal__state.tex [3753] [3754 <./structmom __variables_1_1ocean__internal__state__coll__graph.pdf>]) (./interfaceocean__model__mod_1_1ocean__model__data__get.tex [3755] Package longtable Warning: Column widths have changed (longtable) in table 48.173 on input line 47. [3756] Package longtable Warning: Column widths have changed (longtable) in table 48.174 on input line 96. [3757]) (./structmom__open__boundary_1_1ocean__obc__type.tex Underfull \vbox (badness 3590) has occurred while \output is active [3758] [3759 <./structmom__open__boundary_1_1ocean__obc__type__coll__graph.pdf>] [3760] [3761]) (./structocean__da__types__mod_1_1ocean__profile__type.tex [3762] [3763 <./structocean__da__types__mod_1_1ocean__profile__type__coll__grap h.pdf>] [3764]) (./structocean__model__mod_1_1ocean__public__type.tex [3765 <./ structocean__model__mod_1_1ocean__public__type__coll__graph.pdf>]) (./structocean__model__mod_1_1ocean__state__type.tex [3766] Underfull \vbox (badness 10000) has occurred while \output is active [3767] [3768 <./structocean__model__mod_1_1ocean__state__type__coll__graph.pdf>] [3769]) (./structmom__ocmip2__cfc_1_1ocmip2__cfc__cs.tex [3770] [3771 <./struct mom__ocmip2__cfc_1_1ocmip2__cfc__cs__coll__graph.pdf>] [3772]) (./structmom__oda__driver__mod_1_1oda__cs.tex [3773] [3774 <./structmom__oda__d river__mod_1_1oda__cs__coll__graph.pdf>] [3775]) (./structmom__offline__main_1_1offline__transport__cs.tex [3776] [3777 <./struc tmom__offline__main_1_1offline__transport__cs__coll__graph.pdf>] [3778] [3779] [3780] [3781]) (./structoil__tracer_1_1oil__tracer__cs.tex [3782] [3783 <./structoil__tracer_1_1oil__tracer__cs__coll__graph.pdf>] [3784]) (./structmom__opacity_1_1opacity__cs.tex [3785 <./structmom__opacity_1_1opacity __cs__coll__graph.pdf>]) (./interfacemom__coms_1_1operator_07_09_08.tex [3786] Underfull \hbox (badness 10000) detected at line 35 [][][] Package longtable Warning: Column widths have changed (longtable) in table 48.175 on input line 44. ) (./interfacemom__coms_1_1operator_07-_08.tex [3787] Underfull \hbox (badness 10000) detected at line 35 [][][] Package longtable Warning: Column widths have changed (longtable) in table 48.176 on input line 44. ) (./structmom__opacity_1_1optics__type.tex [3788] [3789 <./structmom__opacity_ 1_1optics__type__coll__graph.pdf>]) (./structmom__restart_1_1p0d.tex) (./structmom__restart_1_1p1d.tex [3790 <./structmom__restart_1_1p0d__coll__grap h.pdf>]) (./structmom__ale__sponge_1_1p2d.tex [3791 <./structmom__restart_1_1p1 d__coll__graph.pdf>]) (./structmom__restart_1_1p2d.tex [3792 <./structmom__ale_ _sponge_1_1p2d__coll__graph.pdf>]) (./structmom__variables_1_1p2d.tex [3793 <./ structmom__restart_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_1p2d.tex [3794 <./structmom__variables_1_1p2d__coll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2d.tex [3795 <./structmom__sponge_1_1p2d__c oll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2di.tex [3796 <./structmo m__tracer__hor__diff_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_1p3d.tex [3797 <./structmom__tracer__hor__diff_1_1p2di__coll__graph.pdf>]) (./structmom__restart_1_1p3d.tex [3798 <./structmom__sponge_1_1p3d__coll__graph .pdf>]) (./structmom__ale__sponge_1_1p3d.tex [3799 <./structmom__restart_1_1p3d __coll__graph.pdf>]) (./structmom__variables_1_1p3d.tex [3800 <./structmom__ale __sponge_1_1p3d__coll__graph.pdf>]) (./structmom__restart_1_1p4d.tex [3801 <./s tructmom__variables_1_1p3d__coll__graph.pdf>]) (./structmom__file__parser_1_1param__file__type.tex [3802 <./structmom__restart _1_1p4d__coll__graph.pdf>] [3803 <./structmom__file__parser_1_1param__file__typ e__coll__graph.pdf>]) (./structmom__file__parser_1_1parameter__block.tex [3804]) (./interfacemom__domains_1_1pass__var.tex [3805 <./structmom__file__par ser_1_1parameter__block__coll__graph.pdf>] [3806] Underfull \vbox (badness 10000) has occurred while \output is active [3807] Overfull \vbox (17.1185pt too high) has occurred while \output is active [3808]) (./interfacemom__domains_1_1pass__var__complete.tex [3809] [3810] Overfull \vbox (9.01045pt too high) has occurred while \output is active [3811]) (./interfacemom__domains_1_1pass__var__start.tex [3812] Underfull \hbox (badness 10000) detected at line 54 [][][] [3813] [3814] Underfull \hbox (badness 10000) detected at line 131 [][][] ) (./interfacemom__domains_1_1pass__vector.tex [3815] [3816] [3817] [3818]) (./interfacemom__domains_1_1pass__vector__complete.tex [3819] [3820] [3821] [3822]) (./interfacemom__domains_1_1pass__vector__start.tex [3823] Underfull \hbox (badness 10000) detected at line 56 [][][] [3824] [3825] Underfull \hbox (badness 10000) detected at line 146 [][][] [3826]) (./structmom__pointaccel_1_1pointaccel__cs.tex [3827 <./structmom__poin taccel_1_1pointaccel__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1post__data.tex [3828] Overfull \vbox (38.17288pt too high) has occurred while \output is active [3829] [3830] [3831] Overfull \vbox (26.4347pt too high) has occurred while \output is active [3832] [3833]) (./structmom__pressureforce_1_1pressureforce__cs.tex [3834]) (./structmom__pressureforce__fv_1_1pressureforce__fv__cs.tex [3835 <./structmom __pressureforce_1_1pressureforce__cs__coll__graph.pdf>] [3836 <./structmom__pre ssureforce__fv_1_1pressureforce__fv__cs__coll__graph.pdf>]) (./structmom__pressureforce__mont_1_1pressureforce__mont__cs.tex [3837 <./struc tmom__pressureforce__mont_1_1pressureforce__mont__cs__coll__graph.pdf>]) (./structmom__random_1_1prng.tex [3838 <./structmom__random_1_1prng__coll__grap h.pdf>]) (./structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs.tex [3839 <. /structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs__coll__graph.pdf>]) (./structmom__oda__driver__mod_1_1ptr__mpp__domain.tex [3840]) (./interfacemom__checksums_1_1qchksum.tex [3841 <./structmom__oda__driver__mod_ 1_1ptr__mpp__domain__coll__graph.pdf>] [3842] Underfull \vbox (badness 10000) has occurred while \output is active [3843] [3844] [3845] Underfull \vbox (badness 10000) has occurred while \output is active [3846]) (./interfacemom__restart_1_1query__initialized.tex [3847] [3848] Package longtable Warning: Column widths have changed (longtable) in table 48.195 on input line 61. Package longtable Warning: Column widths have changed (longtable) in table 48.196 on input line 110. [3849] Package longtable Warning: Column widths have changed (longtable) in table 48.197 on input line 164. [3850] Package longtable Warning: Column widths have changed (longtable) in table 48.198 on input line 213. [3851] Package longtable Warning: Column widths have changed (longtable) in table 48.199 on input line 268. Package longtable Warning: Column widths have changed (longtable) in table 48.200 on input line 318. [3852] Package longtable Warning: Column widths have changed (longtable) in table 48.201 on input line 373. [3853] Package longtable Warning: Column widths have changed (longtable) in table 48.202 on input line 423. [3854] Package longtable Warning: Column widths have changed (longtable) in table 48.203 on input line 478. Package longtable Warning: Column widths have changed (longtable) in table 48.204 on input line 528. Overfull \vbox (1.00325pt too high) has occurred while \output is active [3855] Package longtable Warning: Column widths have changed (longtable) in table 48.205 on input line 583. [3856]) (./interfacemom__file__parser_1_1read__param.tex [3857] [3858] [3859] [3860] Overfull \vbox (16.03447pt too high) has occurred while \output is active [3861] [3862] [3863] [3864]) (./interfacemom__diag__manager__wrapper_1_1register__diag__field__fms.tex [3865] Underfull \hbox (badness 2626) in paragraph at lines 15--16 []\T1/phv/m/n/10 integer func-tion [][]register[]_[]diag[]_[]field[]_[]scalar[] _[]fms[][] (module[]_[]name, field[]_[]name, init[]_[]time, long[]_[]name, unit s, Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]array[]_[]fms [3866] Underfull \hbox (badness 10000) in paragraph at lines 116--117 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]scalar[]_[]fms [3867] [3868]) (./interfacemom__restart_1_1register__restart__field.tex [3869] [3870] [3871] [3872] [3873] [3874] [3875] Underfull \vbox (badness 10000) has occurred while \output is active [3876] [3877] [3878]) (./interfacemom__restart_1_1register__restart__pair.tex [3879] [3880]) (./structmom__regridding_1_1regridding__cs.tex [3881] [3882 <./structmo m__regridding_1_1regridding__cs__coll__graph.pdf>] [3883]) (./structmom__regularize__layers_1_1regularize__layers__cs.tex [3884 <./structm om__regularize__layers_1_1regularize__layers__cs__coll__graph.pdf>]) (./structmom__remapping_1_1remapping__cs.tex [3885] [3886 <./structmom__remappi ng_1_1remapping__cs__coll__graph.pdf>]) (./interfacemom__coms_1_1reproducing__sum.tex [3887] Underfull \hbox (badness 10000) detected at line 60 [][][] [3888] Underfull \vbox (badness 10000) has occurred while \output is active [3889] Underfull \hbox (badness 10000) detected at line 200 [][][] [3890] Underfull \vbox (badness 10000) has occurred while \output is active [3891] Underfull \vbox (badness 10000) has occurred while \output is active [3892]) (./interfacemom__coms_1_1reproducing__sum__efp.tex [3893] Underfull \hbox (badness 10000) detected at line 54 [][][] [3894] Underfull \vbox (badness 10000) has occurred while \output is active [3895]) (./structrgc__tracer_1_1rgc__tracer__cs.tex [3896 <./structrgc__tracer_1_1rgc__ tracer__cs__coll__graph.pdf>]) (./structcoord__rho_1_1rho__cs.tex [3897]) (./interfacemom__array__transform_1_1rotate__array.tex [3898 <./structcoord__rh o_1_1rho__cs__coll__graph.pdf>] Package longtable Warning: Column widths have changed (longtable) in table 48.232 on input line 51. [3899] Package longtable Warning: Column widths have changed (longtable) in table 48.233 on input line 97. [3900] Package longtable Warning: Column widths have changed (longtable) in table 48.234 on input line 143. Package longtable Warning: Column widths have changed (longtable) in table 48.235 on input line 189. Underfull \vbox (badness 10000) has occurred while \output is active [3901] Package longtable Warning: Column widths have changed (longtable) in table 48.236 on input line 224. ) (./interfacemom__array__transform_1_1rotate__array__pair.tex [3902] Package longtable Warning: Column widths have changed (longtable) in table 48.237 on input line 51. [3903] Package longtable Warning: Column widths have changed (longtable) in table 48.238 on input line 94. [3904] Package longtable Warning: Column widths have changed (longtable) in table 48.239 on input line 137. ) (./interfacemom__array__transform_1_1rotate__vector.tex [3905] Package longtable Warning: Column widths have changed (longtable) in table 48.240 on input line 51. [3906] Package longtable Warning: Column widths have changed (longtable) in table 48.241 on input line 94. Package longtable Warning: Column widths have changed (longtable) in table 48.242 on input line 135. Overfull \vbox (29.91698pt too high) has occurred while \output is active [3907]) (./interfacemom__transform__fms_1_1rotated__mpp__chksum.tex) (./interfacemom__transform__fms_1_1rotated__time__interp__external.tex [3908] Package longtable Warning: Column widths have changed (longtable) in table 48.243 on input line 53. Overfull \vbox (46.10497pt too high) has occurred while \output is active [3909]) (./interfacemom__transform__fms_1_1rotated__write__field.tex) (./interfacemom__safe__alloc_1_1safe__alloc__alloc.tex [3910] Package longtable Warning: Column widths have changed (longtable) in table 48.244 on input line 51. Overfull \vbox (22.88931pt too high) has occurred while \output is active [3911] Package longtable Warning: Column widths have changed (longtable) in table 48.245 on input line 92. [3912] Package longtable Warning: Column widths have changed (longtable) in table 48.246 on input line 136. ) (./interfacemom__safe__alloc_1_1safe__alloc__ptr.tex [3913] Package longtable Warning: Column widths have changed (longtable) in table 48.247 on input line 53. [3914] Package longtable Warning: Column widths have changed (longtable) in table 48.248 on input line 94. [3915] Package longtable Warning: Column widths have changed (longtable) in table 48.249 on input line 129. Package longtable Warning: Column widths have changed (longtable) in table 48.250 on input line 168. [3916] Package longtable Warning: Column widths have changed (longtable) in table 48.251 on input line 206. Package longtable Warning: Column widths have changed (longtable) in table 48.252 on input line 248. Overfull \vbox (27.44069pt too high) has occurred while \output is active [3917]) (./structscm__cvmix__tests_1_1scm__cvmix__tests__cs.tex [3918 <./struct scm__cvmix__tests_1_1scm__cvmix__tests__cs__coll__graph.pdf>]) (./structmom__open__boundary_1_1segment__tracer__registry__type.tex [3919]) (./structmom__set__diffusivity_1_1set__diffusivity__cs.tex [3920 <./structmom__ open__boundary_1_1segment__tracer__registry__type__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3921] [3922 <./structmom__set__diffusivity_1_1set__diffusivity__cs__coll__graph.pdf>] [3923] [3924] [3925]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__field.tex [3926] Package longtable Warning: Column widths have changed (longtable) in table 48.253 on input line 47. [3927] [3928]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__vel__field.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [3929] Package longtable Warning: Column widths have changed (longtable) in table 48.255 on input line 51. Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [3930] [3931]) (./structmom__set__visc_1_1set__visc__cs.tex [3932] [3933 <./str uctmom__set__visc_1_1set__visc__cs__coll__graph.pdf>] [3934]) (./structshelfwave__initialization_1_1shelfwave__obc__cs.tex [3935]) (./structcoord__sigma_1_1sigma__cs.tex [3936 <./structshelfwave__initialization _1_1shelfwave__obc__cs__coll__graph.pdf>]) (./structcoord__slight_1_1slight__cs.tex [3937 <./structcoord__sigma_1_1sigma__ cs__coll__graph.pdf>] [3938 <./structcoord__slight_1_1slight__cs__coll__graph.p df>]) (./structmom__sponge_1_1sponge__cs.tex [3939 <./structmom__sponge_1_1spon ge__cs__coll__graph.pdf>] [3940]) (./interfaceregrid__consts_1_1state__dependent.tex [3941] Package longtable Warning: Column widths have changed (longtable) in table 48.257 on input line 41. Package longtable Warning: Column widths have changed (longtable) in table 48.258 on input line 67. ) (./structmom__checksum__packages_1_1stats.tex [3942]) (./structmom__sum__output_1_1sum__output__cs.tex [3943 <./structmom__checksum__ packages_1_1stats__coll__graph.pdf>] [3944 <./structmom__sum__output_1_1sum__ou tput__cs__coll__graph.pdf>] [3945]) (./structmom__variables_1_1surface.tex [3946] [3947 <./structmom__variables_1_1surface__coll__graph.pdf>]) (./structmom__diagnostics_1_1surface__diag__ids.tex [3948] [3949 <./structmom__ diagnostics_1_1surface__diag__ids__coll__graph.pdf>]) (./structmom__surface__forcing_1_1surface__forcing__cs.tex [3950] [3951 <./stru ctmom__surface__forcing_1_1surface__forcing__cs__coll__graph.pdf>] [3952] [3953] [3954] [3955]) (./structmom__surface__forcing__gfdl_1_1surface__forcing__cs.tex [3956] [3957 <./structmom__surface__forcing__gfdl_1_1surface__forcing__cs__coll__graph .pdf>] [3958] [3959]) (./structmom__variables_1_1thermo__var__ptrs.tex [3960] [3961 <./structmom__variables_1_1thermo__var__ptrs__coll__graph.pdf>]) (./structmom__thickness__diffuse_1_1thickness__diffuse__cs.tex [3962] [3963 <./ structmom__thickness__diffuse_1_1thickness__diffuse__cs__coll__graph.pdf>] [3964]) (./structtidal__bay__initialization_1_1tidal__bay__obc__cs.tex [3965]) (./structmom__tidal__forcing_1_1tidal__forcing__cs.tex [3966 <./structtidal__ba y__initialization_1_1tidal__bay__obc__cs__coll__graph.pdf>] [3967 <./structmom_ _tidal__forcing_1_1tidal__forcing__cs__coll__graph.pdf>]) (./structmom__tidal__mixing_1_1tidal__mixing__cs.tex [3968] [3969 <./structmom_ _tidal__mixing_1_1tidal__mixing__cs__coll__graph.pdf>] [3970] [3971]) (./structmom__tidal__mixing_1_1tidal__mixing__diags.tex [3972] [3973 <./structm om__tidal__mixing_1_1tidal__mixing__diags__coll__graph.pdf>]) (./structmom__tracer__advect_1_1tracer__advect__cs.tex [3974]) (./structmom__tracer__flow__control_1_1tracer__flow__control__cs.tex [3975 <./s tructmom__tracer__advect_1_1tracer__advect__cs__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3976] [3977 <./structmom__tracer__flow__control_1_1tracer__flow__control__cs__coll__g raph.pdf>] [3978]) (./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs.tex Underfull \vbox (badness 1237) has occurred while \output is active [3979] [3980 <./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs__coll__graph.pdf >] [3981]) (./structmom__tracer__registry_1_1tracer__registry__type.tex) (./structmom__tracer__registry_1_1tracer__type.tex [3982 <./structmom__tracer__ registry_1_1tracer__registry__type__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3983] [3984 <./structmom__tracer__registry_1_1tracer__type__coll__graph.pdf>] [3985] [3986]) (./structmom__diagnostics_1_1transport__diag__ids.tex [3987] [3988 <./structmom__diagnostics_1_1transport__diag__ids__coll__graph.pdf>]) (./interfacemom__checksums_1_1uchksum.tex [3989] [3990] Underfull \vbox (badness 10000) has occurred while \output is active [3991] [3992] [3993] Underfull \vbox (badness 10000) has occurred while \output is active [3994]) (./structmom__unit__scaling_1_1unit__scale__type.tex [3995] [3996 <./structmom_ _unit__scaling_1_1unit__scale__type__coll__graph.pdf>]) (./structmom__boundary__update_1_1update__obc__cs.tex [3997] [3998 <./structmom __boundary__update_1_1update__obc__cs__coll__graph.pdf>]) (./structuser__change__diffusivity_1_1user__change__diff__cs.tex [3999 <./struc tuser__change__diffusivity_1_1user__change__diff__cs__coll__graph.pdf>]) (./structuser__shelf__init_1_1user__ice__shelf__cs.tex [4000]) (./structuser__revise__forcing_1_1user__revise__forcing__cs.tex [4001 <./struct user__shelf__init_1_1user__ice__shelf__cs__coll__graph.pdf>]) (./structuser__surface__forcing_1_1user__surface__forcing__cs.tex [4002 <./stru ctuser__revise__forcing_1_1user__revise__forcing__cs__coll__graph.pdf>] [4003 <./structuser__surface__forcing_1_1user__surface__forcing__cs__coll__grap h.pdf>]) (./structuser__tracer__example_1_1user__tracer__example__cs.tex [4004 <./structuser__tracer__example_1_1user__tracer__example__cs__coll__graph. pdf>]) (./interfacemom__checksums_1_1uvchksum.tex [4005] Overfull \vbox (17.3705pt too high) has occurred while \output is active [4006] [4007] [4008] [4009]) (./structmom__io_1_1vardesc.tex [4010 <./structmom __io_1_1vardesc__coll__graph.pdf>]) (./structmom__lateral__mixing__coeffs_1_1varmix__cs.tex [4011 <./structmom__lat eral__mixing__coeffs_1_1varmix__cs__coll__graph.pdf>] [4012] [4013] [4014]) (./interfacemom__checksums_1_1vchksum.tex [4015] [4016] Underfull \vbox (badness 10000) has occurred while \output is active [4017] Overfull \vbox (14.08534pt too high) has occurred while \output is active [4018] [4019] Underfull \vbox (badness 10000) has occurred while \output is active [4020]) (./interfacemom__debugging_1_1vec__chksum.tex [4021] Package longtable Warning: Column widths have changed (longtable) in table 48.265 on input line 51. Package longtable Warning: Column widths have changed (longtable) in table 48.266 on input line 105. Overfull \vbox (18.60503pt too high) has occurred while \output is active [4022]) (./interfacemom__debugging_1_1vec__chksum__a.tex [4023] Package longtable Warning: Column widths have changed (longtable) in table 48.267 on input line 51. [4024] Package longtable Warning: Column widths have changed (longtable) in table 48.268 on input line 106. ) (./interfacemom__debugging_1_1vec__chksum__b.tex [4025] [4026] Package longtable Warning: Column widths have changed (longtable) in table 48.270 on input line 106. [4027]) (./interfacemom__debugging_1_1vec__chksum__c.tex [4028] Package longtable Warning: Column widths have changed (longtable) in table 48.271 on input line 51. Package longtable Warning: Column widths have changed (longtable) in table 48.272 on input line 105. Overfull \vbox (18.60503pt too high) has occurred while \output is active [4029]) (./structmom__verticalgrid_1_1verticalgrid__type.tex [4030 <./structmom __verticalgrid_1_1verticalgrid__type__coll__graph.pdf>] [4031]) (./structmom__vert__friction_1_1vertvisc__cs.tex [4032] [4033 <./structmom__ver t__friction_1_1vertvisc__cs__coll__graph.pdf>] [4034] [4035]) (./structmom__variables_1_1vertvisc__type.tex [4036] [4037 <./structmom__variab les_1_1vertvisc__type__coll__graph.pdf>]) (./structmom__wave__interface_1_1wave__parameters__cs.tex [4038] [4039 <./struc tmom__wave__interface_1_1wave__parameters__cs__coll__graph.pdf>]) (./structmom__wave__speed_1_1wave__speed__cs.tex [4040] [4041 <./structmom__wav e__speed_1_1wave__speed__cs__coll__graph.pdf>]) (./structmom__wave__structure_1_1wave__structure__cs.tex [4042 <./structmom__wa ve__structure_1_1wave__structure__cs__coll__graph.pdf>]) (./structmom__write__cputime_1_1write__cputime__cs.tex [4043]) (./structcoord__zlike_1_1zlike__cs.tex [4044 <./structmom__write__cputime_1_1wr ite__cputime__cs__coll__graph.pdf>]) [4045 <./structcoord__zlike_1_1zlike__cs__ coll__graph.pdf>] [4046] Chapter 49. (./MOM__memory_8h.tex Underfull \hbox (badness 8189) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/config[]_[]src/dynamic[] _[]symmetric/[]M[]O[]M[]_[]memory.h File [4047 <./MOM__memory_8h__incl.pdf>]) (./MOM__memory__macros_8h.tex Underfull \hbox (badness 10000) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/src/framework/[]M[]O[]M[ ]_[]memory[]_[]macros.h File Ref-er- [4048] [4049 <./MOM__memory__macros_8h__dep__incl.pdf>] [4050] [4051] [4052]) [4053] (./refman.bbl No file refman.brf. [4054] [4055] [4056]) [4057] [4058] (./refman.ind Underfull \hbox (badness 10000) in paragraph at lines 3--5 []\T1/phv/m/n/10 /home/cermak/src/[]M[]O[]M6.[]devrob/config[]_[]src/dynamic[]_ [] Underfull \hbox (badness 10000) in paragraph at lines 5--7 []\T1/phv/m/n/10 /home/cermak/src/[]M[]O[]M6.[]devrob/src/framework/[]M[]O[]M[] _[] [4059] [4060] Underfull \hbox (badness 10000) in paragraph at lines 325--327 []\T1/phv/m/n/10 boundary[]_[]impulse[]_[]tracer[]::boundary[]_[]impulse[]_[]tr acer[]_[]cs, [4061] [4062] Underfull \hbox (badness 10000) in paragraph at lines 506--508 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]derivs[] _[]linear, Underfull \hbox (badness 10000) in paragraph at lines 510--512 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]nemo[]::calculate[]_[]density[]_[]derivs[]_[ ]nemo, Underfull \hbox (badness 10000) in paragraph at lines 514--516 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[] _[]teos10, Underfull \hbox (badness 10000) in paragraph at lines 518--520 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]derivs[] _[]wright, Underfull \hbox (badness 10000) in paragraph at lines 526--528 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]derivs[] _[]linear, Underfull \hbox (badness 10000) in paragraph at lines 530--532 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]nemo[]::calculate[]_[]density[]_[]derivs[]_[ ]nemo, Underfull \hbox (badness 10000) in paragraph at lines 534--536 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[] _[]teos10, Underfull \hbox (badness 10000) in paragraph at lines 538--540 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]derivs[] _[]wright, Underfull \hbox (badness 10000) in paragraph at lines 571--573 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 575--577 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 579--581 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 587--589 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 591--593 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[] _[] [4063] Underfull \hbox (badness 10000) in paragraph at lines 595--597 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 621--623 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]unesco[]::calculate[]_[]spec[]_[]vol[]_[]une sco, Underfull \hbox (badness 10000) in paragraph at lines 641--643 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]unesco[]::calculate[]_[]spec[]_[]vol[]_[]une sco, [4064] [4065] [4066] [4067] [4068] [4069] [4070] Underfull \hbox (badness 10000) in paragraph at lines 1426--1428 []\T1/phv/m/n/10 dumbbell[]_[]surface[]_[]forcing[]::dumbbell[]_[]surface[]_[]f orcing[]_[]cs, [4071] [4072] [4073] [4074] [4075] Underfull \hbox (badness 10000) in paragraph at lines 2093--2095 []| \T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]an d[]_[] Underfull \hbox (badness 10000) in paragraph at lines 2097--2099 []| \T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]an d[]_[] [4076] [4077] [4078] [4079] [4080] [4081] [4082] [4083] [4084] [4085] Underfull \hbox (badness 10000) in paragraph at lines 3240--3242 []\T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_[] field[]_[]fms, [4086] [4087] Underfull \hbox (badness 10000) in paragraph at lines 3575--3577 []\T1/phv/m/n/10 mom[]_[]dynamics[]_[]unsplit[]_[]rk2[]::mom[]_[]dyn[]_[]unspli t[]_[]rk2[]_[]cs, [4088] Underfull \hbox (badness 10000) in paragraph at lines 3714--3716 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]l inear, Underfull \hbox (badness 10000) in paragraph at lines 3737--3739 []\T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3741--3743 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]l inear, Underfull \hbox (badness 10000) in paragraph at lines 3781--3783 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]te os10, Underfull \hbox (badness 10000) in paragraph at lines 3783--3785 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]t eos10, Underfull \hbox (badness 10000) in paragraph at lines 3791--3793 []\T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[ ]teos10, Underfull \hbox (badness 10000) in paragraph at lines 3797--3799 []\T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3799--3801 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]te os10, Underfull \hbox (badness 10000) in paragraph at lines 3801--3803 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]t eos10, [4089] Underfull \hbox (badness 10000) in paragraph at lines 3849--3851 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]wr ight, Underfull \hbox (badness 10000) in paragraph at lines 3851--3853 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]w right, Underfull \hbox (badness 10000) in paragraph at lines 3868--3870 []\T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3870--3872 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]wr ight, Underfull \hbox (badness 10000) in paragraph at lines 3872--3874 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]w right, [4090] [4091] Underfull \hbox (badness 10000) in paragraph at lines 4161--4163 []\T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]and[ ]_[]extrap[]_[] [4092] [4093] Underfull \hbox (badness 10000) in paragraph at lines 4361--4363 []\T1/phv/m/n/10 mom[]_[]lateral[]_[]boundary[]_[]diffusion[]::lateral[]_[]boun dary[]_[] [4094] [4095] Underfull \hbox (badness 10000) in paragraph at lines 4633--4635 []\T1/phv/m/n/10 mom[]_[]open[]_[]boundary[]::segment[]_[]tracer[]_[]registry[] _[]type, [4096] [4097] Underfull \hbox (badness 10000) in paragraph at lines 5002--5004 []| \T1/phv/m/n/10 mom[]_[]checksum[]_[]packages[]::mom[]_[]state[]_[]chksum, Underfull \hbox (badness 10000) in paragraph at lines 5006--5008 []| \T1/phv/m/n/10 mom[]_[]checksum[]_[]packages[]::mom[]_[]state[]_[]chksum, [4098] Underfull \hbox (badness 10000) in paragraph at lines 5110--5112 []\T1/phv/m/n/10 mom[]_[]surface[]_[]forcing[]_[]gfdl[]::ice[]_[]ocean[]_[]boun dary[]_[]type, [4099] [4100] [4101] [4102] [4103] [4104] [4105] [4106] Underfull \hbox (badness 10000) in paragraph at lines 6142--6144 []| \T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_ []field[] [4107] Underfull \hbox (badness 10000) in paragraph at lines 6151--6153 []| \T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_ []field[] [4108] [4109] Underfull \hbox (badness 10000) in paragraph at lines 6497--6499 []| \T1/phv/m/n/10 mom[]_[]transform[]_[]fms[]::rotated[]_[]time[]_[]interp[]_[ ]external, [4110] [4111] Underfull \hbox (badness 10000) in paragraph at lines 6726--6728 []| \T1/phv/m/n/10 mom[]_[]ale[]_[]sponge[]::set[]_[]up[]_[]ale[]_[]sponge[]_[] vel[]_[]field, Underfull \hbox (badness 10000) in paragraph at lines 6730--6732 []| \T1/phv/m/n/10 mom[]_[]ale[]_[]sponge[]::set[]_[]up[]_[]ale[]_[]sponge[]_[] vel[]_[]field, [4112] [4113] [4114] [4115] [4116] [4117]) Package natbib Warning: There were undefined citations. Package longtable Warning: Table widths have changed. Rerun LaTeX. (./refman.aux Package natbib Warning: Citation(s) may have changed. (natbib) Rerun to get citations correct. ) Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. Package rerunfilecheck Warning: File `refman.brf' has changed. (rerunfilecheck) Rerun to get bibliographical references right. LaTeX Warning: There were undefined references. LaTeX Warning: There were multiply-defined labels. ) (see the transcript file for additional information)pdfTeX warning (dest): name {MESO__surface__forcing_8F90_source} has been referenced but does not exist, re placed by a fixed one pdfTeX warning (dest): name{MOM__diabatic__aux_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__tidal__mixing_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__kappa__shear_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__barotropic_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM_8F90_source} has been referenced but does not e xist, replaced by a fixed one pdfTeX warning (dest): name{MOM__variables_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__surface__forcing_8F90_source} has been referen ced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{write__ocean__obs_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__types_8F90_source} has been referenced b ut does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__core_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{kdtree_8f90_source} has been referenced but does no t exist, replaced by a fixed one {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb> Output written on refman.pdf (4191 pages, 15110881 bytes). Transcript written on refman.log. pdflatex -interaction=nonstopmode refman This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./refman.tex LaTeX2e <2020-02-02> patch level 2 L3 programming layer <2020-02-14> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2019/12/20 v1.4l Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/fixltx2e.sty Package fixltx2e Warning: fixltx2e is not required with releases after 2015 (fixltx2e) All fixes are now in the LaTeX kernel. (fixltx2e) See the latexrelease package for details. ) (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty) (./doxygen.sty (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/colortbl/colortbl.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tabu/tabu.sty (/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/tabularx.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty)) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjustbox.sty (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/trimclip.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg))) (/usr/share/texlive/texmf-dist/tex/latex/collectbox/collectbox.sty) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/tc-pdftex.def)) (/usr/share/texlive/texmf-dist/tex/latex/ifoddpage/ifoddpage.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/wasysym.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/helvet.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/courier.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/sectsty/sectsty.sty LaTeX Warning: Command \underbar has changed. Check if current package is valid. LaTeX Warning: Command \underline has changed. Check if current package is valid. ) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/tocloft/tocloft.sty) Writing index file refman.idx (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/backref.sty (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty) (/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty) (/usr/share/texlive/texmf-dist/tex/latex/caption/ltcaption.sty)) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def) (./refman.aux LaTeX Warning: Label `namespacemom__diag__mediator_downsampling' multiply defin ed. ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (./refman.out) (./refman.out) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/uwasy.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] [2] (./refman.toc [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71]) [72] Chapter 1. (./index.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd)) [1] [2] Chapter 2. (./ALE.tex LaTeX Font Warning: Font shape `U/wasy/b/n' in size <7> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. LaTeX Font Warning: Font shape `U/wasy/b/n' in size <5> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. [3]) [4] Chapter 3. (./ALE_Timestep.tex [5 <./remapping1.png>] Underfull \vbox (badness 10000) has occurred while \output is active [6 <./rema pping2.png>]) [7 <./remapping3.png>] [8] Chapter 4. (./Baroclinic_Momentum_Equations.tex Underfull \vbox (badness 7326) has occurred while \output is active [9] Underfull \vbox (badness 10000) has occurred while \output is active [10 <./tim estep_MOM6.png>]) [11 <./timestep_ROMS.png>] [12] Chapter 5. (./Barotropic_Baroclinic_Coupling.tex [13] [14] [15] Underfull \vbox (badness 10000) has occurred while \output is active [16 <./h_P PM.png>] [17 <./Newton_PPM.png>] Underfull \vbox (badness 4699) has occurred while \output is active [18] [19 <./bottom_drag.png>] [20]) [21 <./bt_bc_thickness.png>] [22] Chapter 6. (./Barotropic_Momentum_Equations.tex) [23] [24] Chapter 7. (./Discrete_Coriolis.tex [25]) [26] [27] [28] Chapter 8. (./Discrete_Grids.tex [29 <./Arakawa_C_grid.png>] [30 <./Grid_metrics.png>]) [31 <./cell_3d.png>] [32] Chapter 9. (./Discrete_OBC.tex) [33] [34] Chapter 10. (./Discrete_PG.tex [35] [36 <./PG_loop.png>]) [37] [38] Chapter 11. (./Energetic_Consistency.tex) [39] [40] Chapter 12. (./Finite_Difference_Operators.tex) [41] [42] Chapter 13. (./General_Coordinate.tex) [43] [44] Chapter 14. (./Governing_Equations.tex [45]) [46] Chapter 15. (./Notation.tex) [47] [48] Chapter 16. (./PPM.tex Underfull \vbox (badness 5374) has occurred while \output is active [49] [50 <./ppm_arc.png>]) [51] [52] Chapter 17. (./Sea_Ice.tex) [53] [54] Chapter 18. (./Solar_Radiation.tex) [55] [56] Chapter 19. (./Specifics.tex [57]) [58] Chapter 20. (./Timestep_Overview.tex) [59 <./timesteps_4.png>] [60] Chapter 21. (./Equation_of_State.tex [61]) [62] Chapter 22. (./Diagnostics.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. [63] [64] [65] [66]) [67] [68] Chapter 23. (./Domain_Decomposition.tex) [69] [70] Chapter 24. (./Global_Grids.tex) [71] [72] Chapter 25. (./Horizontal_Indexing.tex Underfull \vbox (badness 7981) has occurred while \output is active [73] [74] Underfull \vbox (badness 10000) has occurred while \output is active [75 <./Hor izontal_NE_indexing_nonsym.png>] Underfull \hbox (badness 10000) in paragraph at lines 54--55 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed) []:[]: D !$\ OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at h-points Overfull \hbox (16.7466pt too wide) in paragraph at lines 55--56 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed, GV%ke) []:[] : h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Layer thickness [76 <./Horizontal_NE_indexing_sym.png>] Underfull \hbox (badness 10000) in paragraph at lines 61--62 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%jsd[]:HI%jed, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow Underfull \hbox (badness 10000) in paragraph at lines 67--68 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%JsdB[]:HI%JedB, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow Overfull \hbox (16.7466pt too wide) in paragraph at lines 72--73 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB) []:[]: D q !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at q-points Overfull \hbox (16.7466pt too wide) in paragraph at lines 73--74 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB, GV%ke) [ ]:[]: vort !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Vertical ) [77] [78] Chapter 26. (./Parallel_IO.tex) [79] [80] Chapter 27. (./Regional_Grids.tex) [81] [82] Chapter 28. (./Runtime_Parameter_System.tex [83] [84]) [85] [86] Chapter 29. (./Testing.tex Underfull \hbox (badness 10000) detected at line 12 [][][] [87] [88 <./consortium.png>] Underfull \hbox (badness 10000) detected at line 73 [][][] [89] [90 <./Rotated_indices.png>]) [91] [92] Chapter 30. (./Vertical_Grids.tex) [93] [94] Chapter 31. (./CVMix_KPP.tex [95] Underfull \hbox (badness 10000) detected at line 10 [][][] ) [96] Chapter 32. (./Tracer_Advection.tex [97]) [98] Chapter 33. (./Discrete_Tracer.tex) [99] [100] Chapter 34. (./Horizontal_Diffusion.tex [101 <./eddy_fluxes.png>] [102 <./shao0.png>] [103 <./shao1.png>] [104 <./shao2.png>] [105 <./shao3.png>] Underfull \vbox (badness 10000) has occurred while \output is active [106 <./sh ao4.png>] Underfull \vbox (badness 6825) has occurred while \output is active [107 <./sha o5.png>] Underfull \vbox (badness 10000) has occurred while \output is active [108 <./sb l1.png>]) [109 <./sbl2.png>] [110] Chapter 35. (./Passive_Tracers.tex) [111] [112] Chapter 36. (./Tracer_Fluxes.tex) [113] [114] Chapter 37. (./Tracer_Timestep.tex) [115] [116] Chapter 38. (./Tracer_Transport_Equations.tex [117 <./PPM_1d.png>] [118]) [119] [120] Chapter 39. (./Vertical_Diffusion.tex) [121] [122] Chapter 40. (./md__home_cermak_src_MOM6_8devrob_config_src_external_GFDL_ocean_BGC_README.t ex) [123] [124] Chapter 41. (./md__home_cermak_src_MOM6_8devrob_config_src_external_ODA_hooks_README.tex) [125] [126] Chapter 42. (./md__home_cermak_src_MOM6_8devrob_config_src_external_README.tex) [127] [128] Chapter 43. (./todo.tex [129]) [130] Chapter 44. (./namespaces.tex [131] Underfull \vbox (badness 6708) has occurred while \output is active [132] Underfull \vbox (badness 10000) has occurred while \output is active [133] [134] Underfull \vbox (badness 7667) has occurred while \output is active [135] Underfull \vbox (badness 6708) has occurred while \output is active [136] Underfull \vbox (badness 7667) has occurred while \output is active [137] [138]) [139] [140] Chapter 45. (./annotated.tex [141] Underfull \vbox (badness 10000) has occurred while \output is active [142] [143] Underfull \vbox (badness 5908) has occurred while \output is active [144] [145] Underfull \vbox (badness 6708) has occurred while \output is active [146] [147] [148] Underfull \vbox (badness 5908) has occurred while \output is active [149] Underfull \vbox (badness 5231) has occurred while \output is active [150] Underfull \vbox (badness 10000) has occurred while \output is active [151] Underfull \vbox (badness 6708) has occurred while \output is active [152]) [153] [154] Chapter 46. (./files.tex LaTeX Warning: Reference `MOM__surface__forcing__gfdl_8F90' on page 155 undefin ed on input line 3. LaTeX Warning: Reference `ocean__model__MOM_8F90' on page 155 undefined on inpu t line 4. LaTeX Warning: Reference `FMS__coupler__util_8F90' on page 155 undefined on inp ut line 6. LaTeX Warning: Reference `generic__tracer_8F90' on page 155 undefined on input line 7. LaTeX Warning: Reference `generic__tracer__utils_8F90' on page 155 undefined on input line 8. LaTeX Warning: Reference `kdtree_8f90' on page 155 undefined on input line 9. LaTeX Warning: Reference `ocean__da__core_8F90' on page 155 undefined on input line 10. LaTeX Warning: Reference `ocean__da__types_8F90' on page 155 undefined on input line 11. LaTeX Warning: Reference `write__ocean__obs_8F90' on page 155 undefined on inpu t line 12. LaTeX Warning: Reference `atmos__ocean__fluxes_8F90' on page 155 undefined on i nput line 13. LaTeX Warning: Reference `MESO__surface__forcing_8F90' on page 155 undefined on input line 14. LaTeX Warning: Reference `MOM__driver_8F90' on page 155 undefined on input line 15. LaTeX Warning: Reference `MOM__surface__forcing_8F90' on page 155 undefined on input line 16. LaTeX Warning: Reference `user__surface__forcing_8F90' on page 155 undefined on input line 17. LaTeX Warning: Reference `coord__adapt_8F90' on page 155 undefined on input lin e 18. LaTeX Warning: Reference `coord__hycom_8F90' on page 155 undefined on input lin e 19. LaTeX Warning: Reference `coord__rho_8F90' on page 155 undefined on input line 20. LaTeX Warning: Reference `coord__sigma_8F90' on page 155 undefined on input lin e 21. LaTeX Warning: Reference `coord__slight_8F90' on page 155 undefined on input li ne 22. LaTeX Warning: Reference `coord__zlike_8F90' on page 155 undefined on input lin e 23. LaTeX Warning: Reference `MOM__ALE_8F90' on page 155 undefined on input line 24 . LaTeX Warning: Reference `MOM__regridding_8F90' on page 155 undefined on input line 25. LaTeX Warning: Reference `MOM__remapping_8F90' on page 155 undefined on input l ine 26. LaTeX Warning: Reference `P1M__functions_8F90' on page 155 undefined on input l ine 27. LaTeX Warning: Reference `P3M__functions_8F90' on page 155 undefined on input l ine 28. LaTeX Warning: Reference `PCM__functions_8F90' on page 155 undefined on input l ine 29. LaTeX Warning: Reference `PLM__functions_8F90' on page 155 undefined on input l ine 30. LaTeX Warning: Reference `polynomial__functions_8F90' on page 155 undefined on input line 31. LaTeX Warning: Reference `PPM__functions_8F90' on page 155 undefined on input l ine 32. LaTeX Warning: Reference `PQM__functions_8F90' on page 155 undefined on input l ine 33. LaTeX Warning: Reference `regrid__consts_8F90' on page 155 undefined on input l ine 34. LaTeX Warning: Reference `regrid__edge__values_8F90' on page 155 undefined on i nput line 35. LaTeX Warning: Reference `regrid__interp_8F90' on page 155 undefined on input l ine 36. [155] LaTeX Warning: Reference `regrid__solvers_8F90' on page 156 undefined on input line 37. LaTeX Warning: Reference `MOM_8F90' on page 156 undefined on input line 38. LaTeX Warning: Reference `MOM__barotropic_8F90' on page 156 undefined on input line 39. LaTeX Warning: Reference `MOM__boundary__update_8F90' on page 156 undefined on input line 40. LaTeX Warning: Reference `MOM__checksum__packages_8F90' on page 156 undefined o n input line 41. LaTeX Warning: Reference `MOM__continuity_8F90' on page 156 undefined on input line 42. LaTeX Warning: Reference `MOM__continuity__PPM_8F90' on page 156 undefined on i nput line 43. LaTeX Warning: Reference `MOM__CoriolisAdv_8F90' on page 156 undefined on input line 44. LaTeX Warning: Reference `MOM__density__integrals_8F90' on page 156 undefined o n input line 45. LaTeX Warning: Reference `MOM__dynamics__split__RK2_8F90' on page 156 undefined on input line 46. LaTeX Warning: Reference `MOM__dynamics__unsplit_8F90' on page 156 undefined on input line 47. LaTeX Warning: Reference `MOM__dynamics__unsplit__RK2_8F90' on page 156 undefin ed on input line 48. LaTeX Warning: Reference `MOM__forcing__type_8F90' on page 156 undefined on inp ut line 49. LaTeX Warning: Reference `MOM__grid_8F90' on page 156 undefined on input line 5 0. LaTeX Warning: Reference `MOM__interface__heights_8F90' on page 156 undefined o n input line 51. LaTeX Warning: Reference `MOM__isopycnal__slopes_8F90' on page 156 undefined on input line 52. LaTeX Warning: Reference `MOM__open__boundary_8F90' on page 156 undefined on in put line 53. LaTeX Warning: Reference `MOM__PressureForce_8F90' on page 156 undefined on inp ut line 54. LaTeX Warning: Reference `MOM__PressureForce__FV_8F90' on page 156 undefined on input line 55. LaTeX Warning: Reference `MOM__PressureForce__Montgomery_8F90' on page 156 unde fined on input line 56. LaTeX Warning: Reference `MOM__transcribe__grid_8F90' on page 156 undefined on input line 57. LaTeX Warning: Reference `MOM__unit__tests_8F90' on page 156 undefined on input line 58. LaTeX Warning: Reference `MOM__variables_8F90' on page 156 undefined on input l ine 59. LaTeX Warning: Reference `MOM__verticalGrid_8F90' on page 156 undefined on inpu t line 60. LaTeX Warning: Reference `MOM__debugging_8F90' on page 156 undefined on input l ine 61. LaTeX Warning: Reference `MOM__diagnostics_8F90' on page 156 undefined on input line 62. LaTeX Warning: Reference `MOM__obsolete__diagnostics_8F90' on page 156 undefine d on input line 63. LaTeX Warning: Reference `MOM__obsolete__params_8F90' on page 156 undefined on input line 64. LaTeX Warning: Reference `MOM__PointAccel_8F90' on page 156 undefined on input line 65. LaTeX Warning: Reference `MOM__sum__output_8F90' on page 156 undefined on input line 66. LaTeX Warning: Reference `MOM__wave__speed_8F90' on page 156 undefined on input line 67. LaTeX Warning: Reference `MOM__wave__structure_8F90' on page 156 undefined on i nput line 68. LaTeX Warning: Reference `MOM__EOS_8F90' on page 156 undefined on input line 69 . LaTeX Warning: Reference `MOM__EOS__linear_8F90' on page 156 undefined on input line 70. LaTeX Warning: Reference `MOM__EOS__NEMO_8F90' on page 156 undefined on input l ine 71. LaTeX Warning: Reference `MOM__EOS__TEOS10_8F90' on page 156 undefined on input line 72. LaTeX Warning: Reference `MOM__EOS__UNESCO_8F90' on page 156 undefined on input line 73. LaTeX Warning: Reference `MOM__EOS__Wright_8F90' on page 156 undefined on input line 74. LaTeX Warning: Reference `MOM__TFreeze_8F90' on page 156 undefined on input lin e 75. LaTeX Warning: Reference `MOM__array__transform_8F90' on page 156 undefined on input line 76. LaTeX Warning: Reference `MOM__checksums_8F90' on page 156 undefined on input l ine 77. LaTeX Warning: Reference `MOM__coms_8F90' on page 156 undefined on input line 7 8. LaTeX Warning: Reference `MOM__constants_8F90' on page 156 undefined on input l ine 79. LaTeX Warning: Reference `MOM__cpu__clock_8F90' on page 156 undefined on input line 80. LaTeX Warning: Reference `MOM__diag__manager__wrapper_8F90' on page 156 undefin ed on input line 81. LaTeX Warning: Reference `MOM__diag__mediator_8F90' on page 156 undefined on in put line 82. LaTeX Warning: Reference `MOM__diag__remap_8F90' on page 156 undefined on input line 83. LaTeX Warning: Reference `MOM__diag__vkernels_8F90' on page 156 undefined on in put line 84. LaTeX Warning: Reference `MOM__document_8F90' on page 156 undefined on input li ne 85. LaTeX Warning: Reference `MOM__domains_8F90' on page 156 undefined on input lin e 86. LaTeX Warning: Reference `MOM__dyn__horgrid_8F90' on page 156 undefined on inpu t line 87. [156] LaTeX Warning: Reference `MOM__error__handler_8F90' on page 157 undefined on in put line 88. LaTeX Warning: Reference `MOM__file__parser_8F90' on page 157 undefined on inpu t line 89. LaTeX Warning: Reference `MOM__get__input_8F90' on page 157 undefined on input line 90. LaTeX Warning: Reference `MOM__hor__index_8F90' on page 157 undefined on input line 91. LaTeX Warning: Reference `MOM__horizontal__regridding_8F90' on page 157 undefin ed on input line 92. LaTeX Warning: Reference `MOM__intrinsic__functions_8F90' on page 157 undefined on input line 93. LaTeX Warning: Reference `MOM__io_8F90' on page 157 undefined on input line 94. LaTeX Warning: Reference `MOM__random_8F90' on page 157 undefined on input line 96. LaTeX Warning: Reference `MOM__restart_8F90' on page 157 undefined on input lin e 97. LaTeX Warning: Reference `MOM__safe__alloc_8F90' on page 157 undefined on input line 98. LaTeX Warning: Reference `MOM__spatial__means_8F90' on page 157 undefined on in put line 99. LaTeX Warning: Reference `MOM__string__functions_8F90' on page 157 undefined on input line 100. LaTeX Warning: Reference `MOM__time__manager_8F90' on page 157 undefined on inp ut line 101. LaTeX Warning: Reference `MOM__transform__FMS_8F90' on page 157 undefined on in put line 102. LaTeX Warning: Reference `MOM__unit__scaling_8F90' on page 157 undefined on inp ut line 103. LaTeX Warning: Reference `MOM__write__cputime_8F90' on page 157 undefined on in put line 104. LaTeX Warning: Reference `version__variable_8h' on page 157 undefined on input line 105. LaTeX Warning: Reference `MOM__ice__shelf_8F90' on page 157 undefined on input line 106. LaTeX Warning: Reference `MOM__ice__shelf__dynamics_8F90' on page 157 undefined on input line 107. LaTeX Warning: Reference `MOM__ice__shelf__initialize_8F90' on page 157 undefin ed on input line 108. LaTeX Warning: Reference `MOM__ice__shelf__state_8F90' on page 157 undefined on input line 109. LaTeX Warning: Reference `MOM__marine__ice_8F90' on page 157 undefined on input line 110. LaTeX Warning: Reference `user__shelf__init_8F90' on page 157 undefined on inpu t line 111. LaTeX Warning: Reference `MOM__coord__initialization_8F90' on page 157 undefine d on input line 112. LaTeX Warning: Reference `MOM__fixed__initialization_8F90' on page 157 undefine d on input line 113. LaTeX Warning: Reference `MOM__grid__initialize_8F90' on page 157 undefined on input line 114. LaTeX Warning: Reference `MOM__shared__initialization_8F90' on page 157 undefin ed on input line 115. LaTeX Warning: Reference `MOM__state__initialization_8F90' on page 157 undefine d on input line 116. LaTeX Warning: Reference `MOM__tracer__initialization__from__Z_8F90' on page 15 7 undefined on input line 117. LaTeX Warning: Reference `MOM__oda__driver_8F90' on page 157 undefined on input line 118. LaTeX Warning: Reference `MOM__hor__visc_8F90' on page 157 undefined on input l ine 119. LaTeX Warning: Reference `MOM__internal__tides_8F90' on page 157 undefined on i nput line 120. LaTeX Warning: Reference `MOM__lateral__mixing__coeffs_8F90' on page 157 undefi ned on input line 121. LaTeX Warning: Reference `MOM__MEKE_8F90' on page 157 undefined on input line 1 22. LaTeX Warning: Reference `MOM__MEKE__types_8F90' on page 157 undefined on input line 123. LaTeX Warning: Reference `MOM__mixed__layer__restrat_8F90' on page 157 undefine d on input line 124. LaTeX Warning: Reference `MOM__thickness__diffuse_8F90' on page 157 undefined o n input line 125. LaTeX Warning: Reference `MOM__tidal__forcing_8F90' on page 157 undefined on in put line 126. LaTeX Warning: Reference `MOM__ALE__sponge_8F90' on page 157 undefined on input line 127. LaTeX Warning: Reference `MOM__bkgnd__mixing_8F90' on page 157 undefined on inp ut line 128. LaTeX Warning: Reference `MOM__bulk__mixed__layer_8F90' on page 157 undefined o n input line 129. LaTeX Warning: Reference `MOM__CVMix__conv_8F90' on page 157 undefined on input line 130. LaTeX Warning: Reference `MOM__CVMix__ddiff_8F90' on page 157 undefined on inpu t line 131. LaTeX Warning: Reference `MOM__CVMix__KPP_8F90' on page 157 undefined on input line 132. LaTeX Warning: Reference `MOM__CVMix__shear_8F90' on page 157 undefined on inpu t line 133. LaTeX Warning: Reference `MOM__diabatic__aux_8F90' on page 157 undefined on inp ut line 134. LaTeX Warning: Reference `MOM__diabatic__driver_8F90' on page 157 undefined on input line 135. LaTeX Warning: Reference `MOM__diapyc__energy__req_8F90' on page 157 undefined on input line 136. LaTeX Warning: Reference `MOM__energetic__PBL_8F90' on page 157 undefined on in put line 137. LaTeX Warning: Reference `MOM__entrain__diffusive_8F90' on page 157 undefined o n input line 138. LaTeX Warning: Reference `MOM__full__convection_8F90' on page 157 undefined on input line 139. LaTeX Warning: Reference `MOM__geothermal_8F90' on page 157 undefined on input line 140. [157] LaTeX Warning: Reference `MOM__internal__tide__input_8F90' on page 158 undefine d on input line 141. LaTeX Warning: Reference `MOM__kappa__shear_8F90' on page 158 undefined on inpu t line 142. LaTeX Warning: Reference `MOM__opacity_8F90' on page 158 undefined on input lin e 143. LaTeX Warning: Reference `MOM__regularize__layers_8F90' on page 158 undefined o n input line 144. LaTeX Warning: Reference `MOM__set__diffusivity_8F90' on page 158 undefined on input line 145. LaTeX Warning: Reference `MOM__set__viscosity_8F90' on page 158 undefined on in put line 146. LaTeX Warning: Reference `MOM__sponge_8F90' on page 158 undefined on input line 147. LaTeX Warning: Reference `MOM__tidal__mixing_8F90' on page 158 undefined on inp ut line 148. LaTeX Warning: Reference `MOM__vert__friction_8F90' on page 158 undefined on in put line 149. LaTeX Warning: Reference `advection__test__tracer_8F90' on page 158 undefined o n input line 150. LaTeX Warning: Reference `boundary__impulse__tracer_8F90' on page 158 undefined on input line 151. LaTeX Warning: Reference `DOME__tracer_8F90' on page 158 undefined on input lin e 152. LaTeX Warning: Reference `dye__example_8F90' on page 158 undefined on input lin e 153. LaTeX Warning: Reference `dyed__obc__tracer_8F90' on page 158 undefined on inpu t line 154. LaTeX Warning: Reference `ideal__age__example_8F90' on page 158 undefined on in put line 155. LaTeX Warning: Reference `ISOMIP__tracer_8F90' on page 158 undefined on input l ine 156. LaTeX Warning: Reference `MOM__generic__tracer_8F90' on page 158 undefined on i nput line 157. LaTeX Warning: Reference `MOM__lateral__boundary__diffusion_8F90' on page 158 u ndefined on input line 158. LaTeX Warning: Reference `MOM__neutral__diffusion_8F90' on page 158 undefined o n input line 159. LaTeX Warning: Reference `MOM__OCMIP2__CFC_8F90' on page 158 undefined on input line 160. LaTeX Warning: Reference `MOM__offline__aux_8F90' on page 158 undefined on inpu t line 161. LaTeX Warning: Reference `MOM__offline__main_8F90' on page 158 undefined on inp ut line 162. LaTeX Warning: Reference `MOM__tracer__advect_8F90' on page 158 undefined on in put line 163. LaTeX Warning: Reference `MOM__tracer__diabatic_8F90' on page 158 undefined on input line 164. LaTeX Warning: Reference `MOM__tracer__flow__control_8F90' on page 158 undefine d on input line 165. LaTeX Warning: Reference `MOM__tracer__hor__diff_8F90' on page 158 undefined on input line 166. LaTeX Warning: Reference `MOM__tracer__registry_8F90' on page 158 undefined on input line 167. LaTeX Warning: Reference `MOM__tracer__Z__init_8F90' on page 158 undefined on i nput line 168. LaTeX Warning: Reference `oil__tracer_8F90' on page 158 undefined on input line 169. LaTeX Warning: Reference `pseudo__salt__tracer_8F90' on page 158 undefined on i nput line 170. LaTeX Warning: Reference `RGC__tracer_8F90' on page 158 undefined on input line 171. LaTeX Warning: Reference `tracer__example_8F90' on page 158 undefined on input line 172. LaTeX Warning: Reference `adjustment__initialization_8F90' on page 158 undefine d on input line 173. LaTeX Warning: Reference `baroclinic__zone__initialization_8F90' on page 158 un defined on input line 174. LaTeX Warning: Reference `basin__builder_8F90' on page 158 undefined on input l ine 175. LaTeX Warning: Reference `benchmark__initialization_8F90' on page 158 undefined on input line 176. LaTeX Warning: Reference `BFB__initialization_8F90' on page 158 undefined on in put line 177. LaTeX Warning: Reference `BFB__surface__forcing_8F90' on page 158 undefined on input line 178. LaTeX Warning: Reference `circle__obcs__initialization_8F90' on page 158 undefi ned on input line 179. LaTeX Warning: Reference `dense__water__initialization_8F90' on page 158 undefi ned on input line 180. LaTeX Warning: Reference `DOME2d__initialization_8F90' on page 158 undefined on input line 181. LaTeX Warning: Reference `DOME__initialization_8F90' on page 158 undefined on i nput line 182. LaTeX Warning: Reference `dumbbell__initialization_8F90' on page 158 undefined on input line 183. LaTeX Warning: Reference `dumbbell__surface__forcing_8F90' on page 158 undefine d on input line 184. LaTeX Warning: Reference `dyed__channel__initialization_8F90' on page 158 undef ined on input line 185. LaTeX Warning: Reference `dyed__obcs__initialization_8F90' on page 158 undefine d on input line 186. LaTeX Warning: Reference `external__gwave__initialization_8F90' on page 158 und efined on input line 187. LaTeX Warning: Reference `Idealized__Hurricane_8F90' on page 158 undefined on i nput line 188. LaTeX Warning: Reference `ISOMIP__initialization_8F90' on page 158 undefined on input line 189. LaTeX Warning: Reference `Kelvin__initialization_8F90' on page 158 undefined on input line 190. LaTeX Warning: Reference `lock__exchange__initialization_8F90' on page 158 unde fined on input line 191. LaTeX Warning: Reference `MOM__controlled__forcing_8F90' on page 158 undefined on input line 192. LaTeX Warning: Reference `MOM__wave__interface_8F90' on page 158 undefined on i nput line 193. LaTeX Warning: Reference `Neverworld__initialization_8F90' on page 158 undefine d on input line 194. [158] LaTeX Warning: Reference `Phillips__initialization_8F90' on page 159 undefined on input line 195. LaTeX Warning: Reference `RGC__initialization_8F90' on page 159 undefined on in put line 196. LaTeX Warning: Reference `Rossby__front__2d__initialization_8F90' on page 159 u ndefined on input line 197. LaTeX Warning: Reference `SCM__CVMix__tests_8F90' on page 159 undefined on inpu t line 198. LaTeX Warning: Reference `seamount__initialization_8F90' on page 159 undefined on input line 199. LaTeX Warning: Reference `shelfwave__initialization_8F90' on page 159 undefined on input line 200. LaTeX Warning: Reference `sloshing__initialization_8F90' on page 159 undefined on input line 201. LaTeX Warning: Reference `soliton__initialization_8F90' on page 159 undefined o n input line 202. LaTeX Warning: Reference `supercritical__initialization_8F90' on page 159 undef ined on input line 203. LaTeX Warning: Reference `tidal__bay__initialization_8F90' on page 159 undefine d on input line 204. LaTeX Warning: Reference `user__change__diffusivity_8F90' on page 159 undefined on input line 205. LaTeX Warning: Reference `user__initialization_8F90' on page 159 undefined on i nput line 206. LaTeX Warning: Reference `user__revise__forcing_8F90' on page 159 undefined on input line 207. ) [159] [160] Chapter 47. (./namespaceadjustment__initialization.tex [161] [162] [163] [164] [165] Underfull \vbox (badness 10000) has occurred while \output is active [166]) (./namespaceadvection__test__tracer.tex [167] Underfull \hbox (badness 10000) detected at line 64 [][][] [168] [169] [170] [171] [172] Underfull \vbox (badness 10000) has occurred while \output is active [173] [174]) (./namespaceatmos__ocean__fluxes__mod.tex [175] [176]) (./namespacebaroclinic__zone__initialization.tex [177] [178] [179]) (./namespacebasin__builder.tex [180] [181] [182] [183] Underfull \vbox (badness 10000) has occurred while \output is active [184] [185] Overfull \vbox (26.22467pt too high) has occurred while \output is active [186] [187] [188] [189] [190]) (./namespacebenchmark__initialization.tex [191] [192] [193] [194] [195] [196]) (./namespacebfb__initialization.tex [197] Overfull \vbox (6.91788pt too high) has occurred while \output is active [198] [199] [200] [201]) (./namespacebfb__surface__forcing.tex [202] [203] [204] [205]) (./namespaceboundary__impulse__tracer.tex [206] [207] Underfull \hbox (badness 10000) detected at line 75 [][][] [208] [209] [210] [211] [212] Overfull \vbox (16.42203pt too high) has occurred while \output is active [213] [214]) (./namespacecircle__obcs__initialization.tex [215] Underfull \vbox (badness 10000) has occurred while \output is active [216]) (./namespacecoord__adapt.tex [217] [218] Underfull \vbox (badness 10000) has occurred while \output is active [219] [220] [221]) (./namespacecoord__hycom.tex [222] Overfull \vbox (63.99036pt too high) has occurred while \output is active [223] [224] [225]) (./namespacecoord__rho.tex [226] [227] [228] [229] [230] Underfull \vbox (badness 10000) has occurred while \output is active [231] [232] [233] Overfull \vbox (8.41132pt too high) has occurred while \output is active [234] [235]) (./namespacecoord__sigma.tex [236] [237] [238]) (./namespacecoord__slight.tex Underfull \hbox (badness 5316) in paragraph at lines 18--19 []\T1/phv/m/n/10 subroutine, pub-lic [][]set[]_[]slight[]_[]params[][] (CS, max []_[]interface[]_[]depths, max[]_[]layer[]_[]thickness, min[]_[]thickness, Underfull \hbox (badness 940) in paragraph at lines 18--19 \T1/phv/m/n/10 compressibility[]_[]fraction, dz[]_[]ml[]_[]min, nz[]_[]fixed[]_ []surface, Rho[]_[][]M[]L[]_[]avg[]_[]depth, nlay[]_[][]M[]L[]_[]offset, fix[]_ []haloclines, [239] [240] Underfull \vbox (badness 10000) has occurred while \output is active [241] Underfull \vbox (badness 10000) has occurred while \output is active [242] Underfull \vbox (badness 10000) has occurred while \output is active [243] [244] [245] [246] Underfull \vbox (badness 10000) has occurred while \output is active [247] Underfull \vbox (badness 10000) has occurred while \output is active [248] [249] [250]) (./namespacecoord__zlike.tex [251] [252] [253] [254]) (./namespacedense__water__initialization.tex [255] [256] Underfull \vbox (badness 10000) has occurred while \output is active [257] Underfull \vbox (badness 10000) has occurred while \output is active [258] [259] [260]) (./namespacedome2d__initialization.tex [261] [262] Underfull \vbox (badness 10000) has occurred while \output is active [263] [264] Underfull \vbox (badness 10000) has occurred while \output is active [265] Overfull \vbox (16.8857pt too high) has occurred while \output is active [266] [267] Overfull \vbox (11.34378pt too high) has occurred while \output is active [268]) (./namespacedome__initialization.tex [269] [270] [271] [272] [273] [274] Underfull \vbox (badness 10000) has occurred while \output is active [275]) (./namespacedome__tracer.tex [276] [277] [278] [279] [280] [281] Underfull \vbox (badness 10000) has occurred while \output is active [282] [283]) (./namespacedumbbell__initialization.tex [284] Underfull \vbox (badness 10000) has occurred while \output is active [285] [286] Underfull \vbox (badness 10000) has occurred while \output is active [287] [288] [289] [290]) (./namespacedumbbell__surface__forcing.tex [291] Overfull \vbox (36.78252pt too high) has occurred while \output is active [292] [293] [294] [295]) (./namespacedyed__channel__initialization.tex [296] [297] [298] [299] [300]) (./namespacedyed__obc__tracer.tex [301] [302] [303] [304] [305] [306] [307]) (./namespacedyed__obcs__initialization.tex [308] [309]) (./namespaceexternal__gwave__initialization.tex [310]) (./namespaceg__tracer__utils.tex [311] [312] [313] Overfull \vbox (37.85315pt too high) has occurred while \output is active [314] [315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325]) (./namespacegeneric__tracer.tex [326] [327] [328] [329] [330] [331] [332] [333]) (./namespaceideal__age__example.tex [334] [335] Underfull \hbox (badness 10000) detected at line 99 [][][] [336] [337] [338] [339] Underfull \vbox (badness 10000) has occurred while \output is active [340] [341] [342] Underfull \vbox (badness 10000) has occurred while \output is active [343]) (./namespaceidealized__hurricane.tex [344] [345] Underfull \vbox (badness 10000) has occurred while \output is active [346] [347] [348] [349] Underfull \vbox (badness 10000) has occurred while \output is active [350] [351] Underfull \vbox (badness 10000) has occurred while \output is active [352] Underfull \vbox (badness 10000) has occurred while \output is active [353]) (./namespaceisomip__initialization.tex Overfull \hbox (53.15218pt too wide) in paragraph at lines 8--8 []\T1/phv/m/n/10 See this pa-per for details[]: [][]\T1/pcr/m/n/10 http[]://www .[]geosci-model-dev-discuss.[]net/8/9859/2015/gmdd-8-9859-2015.[] [354] [355] Underfull \vbox (badness 10000) has occurred while \output is active [356] Underfull \vbox (badness 10000) has occurred while \output is active [357] [358] [359] Underfull \vbox (badness 10000) has occurred while \output is active [360] [361] [362] [363] [364]) (./namespaceisomip__tracer.tex [365] [366] Underfull \vbox (badness 10000) has occurred while \output is active [367] [368] [369] [370] [371]) (./namespacekdtree.tex [372]) (./namespacekelvin__initialization.tex [373] [374] [375] Underfull \vbox (badness 10000) has occurred while \output is active [376] Underfull \vbox (badness 10000) has occurred while \output is active [377] [378]) (./namespacelock__exchange__initialization.tex [379] [380]) (./namespacemeso__surface__forcing.tex [381] [382] Underfull \vbox (badness 10000) has occurred while \output is active [383] Underfull \vbox (badness 10000) has occurred while \output is active [384]) (./namespacemom.tex [385] Underfull \hbox (badness 10000) detected at line 10 [][][] [386] [387] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \vbox (badness 10000) has occurred while \output is active [396] Underfull \vbox (badness 10000) has occurred while \output is active [397] Underfull \vbox (badness 10000) has occurred while \output is active [398] Underfull \vbox (badness 10000) has occurred while \output is active [399] [400] [401] [402] [403] [404] Underfull \vbox (badness 10000) has occurred while \output is active [405] Underfull \vbox (badness 10000) has occurred while \output is active [406] Underfull \vbox (badness 10000) has occurred while \output is active [407] Underfull \vbox (badness 10000) has occurred while \output is active [408] Underfull \vbox (badness 10000) has occurred while \output is active [409] Underfull \vbox (badness 10000) has occurred while \output is active [410] Underfull \vbox (badness 10000) has occurred while \output is active [411] Underfull \vbox (badness 10000) has occurred while \output is active [412] Underfull \vbox (badness 10000) has occurred while \output is active [413] Underfull \vbox (badness 10000) has occurred while \output is active [414] Underfull \vbox (badness 10000) has occurred while \output is active [415] Underfull \vbox (badness 10000) has occurred while \output is active [416] Underfull \vbox (badness 10000) has occurred while \output is active [417] [418] [419] Underfull \hbox (badness 10000) detected at line 2259 [][][] [420] [421] [422] [423] [424] Underfull \vbox (badness 10000) has occurred while \output is active [425] Underfull \vbox (badness 10000) has occurred while \output is active [426] Underfull \vbox (badness 10000) has occurred while \output is active [427] Underfull \vbox (badness 10000) has occurred while \output is active [428] Underfull \vbox (badness 10000) has occurred while \output is active [429] [430] [431] Underfull \vbox (badness 10000) has occurred while \output is active [432] [433] [434] Underfull \vbox (badness 10000) has occurred while \output is active [435] [436] [437] Underfull \vbox (badness 10000) has occurred while \output is active [438] [439] Underfull \vbox (badness 10000) has occurred while \output is active [440]) (./namespacemom__ale.tex [441] [442] Underfull \vbox (badness 10000) has occurred while \output is active [443] [444] [445] [446] [447] Overfull \vbox (24.87663pt too high) has occurred while \output is active [448] [449] [450] [451] [452] [453] [454] [455] [456] Underfull \vbox (badness 10000) has occurred while \output is active [457] Underfull \hbox (badness 10000) in paragraph at lines 1065--1066 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \vbox (badness 10000) has occurred while \output is active [467] [468] [469] [470]) (./namespacemom__ale__sponge.tex [471] [472] Overfull \vbox (10.4989pt too high) has occurred while \output is active [473] [474] Underfull \vbox (badness 10000) has occurred while \output is active [475] Underfull \vbox (badness 10000) has occurred while \output is active [476] Underfull \hbox (badness 10000) detected at line 373 [][][] [477] [478] [479] Underfull \vbox (badness 10000) has occurred while \output is active [480] [481] [482] Underfull \vbox (badness 10000) has occurred while \output is active [483] [484] Underfull \vbox (badness 10000) has occurred while \output is active [485] [486] Underfull \vbox (badness 10000) has occurred while \output is active [487] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [488] Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [489] [490] Underfull \hbox (badness 10000) in paragraph at lines 1413--1414 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), target \T1/pcr/m/sl/8 p[]_[]new [491]) (./namespacemom__array__transform.tex [492] [493] [494] [495] [496] [497] Underfull \vbox (badness 10000) has occurred while \output is active [498] [499] Underfull \vbox (badness 10000) has occurred while \output is active [500] [501] [502]) (./namespacemom__barotropic.tex [503] [504] [505] [506] Overfull \vbox (56.21756pt too high) has occurred while \output is active [507] [508] [509] [510] Underfull \vbox (badness 10000) has occurred while \output is active [511] Underfull \vbox (badness 10000) has occurred while \output is active [512] [513] [514] Underfull \vbox (badness 10000) has occurred while \output is active [515] [516] Underfull \vbox (badness 10000) has occurred while \output is active [517] Underfull \vbox (badness 10000) has occurred while \output is active [518] Underfull \vbox (badness 10000) has occurred while \output is active [519] Underfull \vbox (badness 10000) has occurred while \output is active [520] Underfull \vbox (badness 10000) has occurred while \output is active [521] Underfull \vbox (badness 10000) has occurred while \output is active [522] Underfull \vbox (badness 10000) has occurred while \output is active [523] [524] [525] [526] [527] Underfull \vbox (badness 10000) has occurred while \output is active [528] Underfull \vbox (badness 10000) has occurred while \output is active [529] Underfull \vbox (badness 10000) has occurred while \output is active [530] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] [531] [532] [533] Underfull \vbox (badness 10000) has occurred while \output is active [534] Underfull \vbox (badness 10000) has occurred while \output is active [535] Underfull \vbox (badness 10000) has occurred while \output is active [536] Underfull \vbox (badness 10000) has occurred while \output is active [537] Underfull \vbox (badness 10000) has occurred while \output is active [538] Underfull \vbox (badness 10000) has occurred while \output is active [539] Underfull \vbox (badness 10000) has occurred while \output is active [540] Underfull \vbox (badness 10000) has occurred while \output is active [541] Underfull \vbox (badness 10000) has occurred while \output is active [542] Underfull \vbox (badness 10000) has occurred while \output is active [543] Underfull \vbox (badness 10000) has occurred while \output is active [544] Underfull \vbox (badness 10000) has occurred while \output is active [545] Underfull \vbox (badness 10000) has occurred while \output is active [546] Underfull \vbox (badness 10000) has occurred while \output is active [547] Underfull \vbox (badness 10000) has occurred while \output is active [548] Underfull \vbox (badness 10000) has occurred while \output is active [549] Underfull \vbox (badness 10000) has occurred while \output is active [550] Underfull \vbox (badness 10000) has occurred while \output is active [551] Underfull \vbox (badness 10000) has occurred while \output is active [552] Underfull \vbox (badness 10000) has occurred while \output is active [553] Underfull \vbox (badness 10000) has occurred while \output is active [554] Underfull \vbox (badness 10000) has occurred while \output is active [555] Underfull \vbox (badness 10000) has occurred while \output is active [556] Underfull \vbox (badness 10000) has occurred while \output is active [557] Underfull \vbox (badness 10000) has occurred while \output is active [558] Underfull \vbox (badness 10000) has occurred while \output is active [559] Underfull \vbox (badness 10000) has occurred while \output is active [560] [561] Underfull \hbox (badness 10000) detected at line 4343 [][][] [562] Underfull \hbox (badness 10000) detected at line 4390 [][][] [563] [564] [565] Underfull \hbox (badness 10000) detected at line 4569 [][][] [566] Underfull \hbox (badness 10000) detected at line 4618 [][][] [567] [568] [569] Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]u[]_[]type[][]), dimension( ms %isdw-1[]: ms %iedw, ms %jsdw[]: ms %jedw), Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]v[]_[]type[][]), dimension( ms %isdw[]: ms %iedw, ms %jsdw-1[]: ms %jedw), [570] [571] Underfull \vbox (badness 10000) has occurred while \output is active [572] Underfull \hbox (badness 10000) in paragraph at lines 5077--5078 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]v[]_[]type[][]), dimension( sziw[]_[](ms),szjbw[]_[](ms)), intent(in) \T1/pcr/m/sl/8 B[]T[]C[]L[]_[]v \T1/p cr/m/n/8 ) [573] [574] Underfull \vbox (badness 10000) has occurred while \output is active [575] Underfull \vbox (badness 10000) has occurred while \output is active [576] [577] Underfull \hbox (badness 10000) detected at line 5375 [][][] [578] Underfull \hbox (badness 10000) detected at line 5507 [][][] [579] Underfull \vbox (badness 10000) has occurred while \output is active [580]) (./namespacemom__bkgnd__mixing.tex [581] Overfull \vbox (4.83084pt too high) has occurred while \output is active [582] [583] Underfull \vbox (badness 10000) has occurred while \output is active [584] [585] [586] Underfull \vbox (badness 10000) has occurred while \output is active [587] [588]) (./namespacemom__boundary__update.tex [589] [590] [591] [592]) (./namespacemom__bulk__mixed__layer.tex [593] [594] [595] [596] Underfull \vbox (badness 10000) has occurred while \output is active [597] Underfull \vbox (badness 10000) has occurred while \output is active [598] Underfull \vbox (badness 10000) has occurred while \output is active [599] Underfull \vbox (badness 10000) has occurred while \output is active [600] Underfull \vbox (badness 10000) has occurred while \output is active [601] Underfull \vbox (badness 10000) has occurred while \output is active [602] Underfull \vbox (badness 10000) has occurred while \output is active [603] [604] Underfull \vbox (badness 10000) has occurred while \output is active [605] Underfull \vbox (badness 10000) has occurred while \output is active [606] Underfull \vbox (badness 10000) has occurred while \output is active [607] [608] [609] Underfull \vbox (badness 10000) has occurred while \output is active [610] Underfull \hbox (badness 10000) detected at line 1278 [][][] [611] [612] [613] Underfull \vbox (badness 10000) has occurred while \output is active [614] [615] [616] [617] Underfull \vbox (badness 10000) has occurred while \output is active [618] Underfull \vbox (badness 10000) has occurred while \output is active [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] Underfull \vbox (badness 10000) has occurred while \output is active [624] Underfull \vbox (badness 10000) has occurred while \output is active [625] Underfull \vbox (badness 10000) has occurred while \output is active [626] Underfull \vbox (badness 10000) has occurred while \output is active [627] [628] [629] Underfull \vbox (badness 10000) has occurred while \output is active [630] Underfull \vbox (badness 10000) has occurred while \output is active [631] Underfull \vbox (badness 10000) has occurred while \output is active [632] [633] [634] Underfull \vbox (badness 10000) has occurred while \output is active [635] Underfull \vbox (badness 10000) has occurred while \output is active [636] Underfull \vbox (badness 10000) has occurred while \output is active [637] Underfull \vbox (badness 10000) has occurred while \output is active [638] Underfull \vbox (badness 10000) has occurred while \output is active [639] Underfull \vbox (badness 10000) has occurred while \output is active [640] Underfull \vbox (badness 10000) has occurred while \output is active [641] Underfull \vbox (badness 10000) has occurred while \output is active [642] Underfull \vbox (badness 10000) has occurred while \output is active [643] Underfull \vbox (badness 10000) has occurred while \output is active [644] [645] [646] Underfull \vbox (badness 10000) has occurred while \output is active [647] Underfull \vbox (badness 10000) has occurred while \output is active [648] Underfull \vbox (badness 10000) has occurred while \output is active [649] [650]) (./namespacemom__checksum__packages.tex [651] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 u[] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 v[] [652] [653] [654] [655] Underfull \vbox (badness 10000) has occurred while \output is active [656] [657] [658] [659]) (./namespacemom__checksums.tex [660] [661] [662] [663] [664] Underfull \vbox (badness 10000) has occurred while \output is active [665] [666] Overfull \vbox (6.56526pt too high) has occurred while \output is active [667] [668] [669] [670] Overfull \vbox (36.94623pt too high) has occurred while \output is active [671] [672] Underfull \vbox (badness 10000) has occurred while \output is active [673] [674] Underfull \vbox (badness 10000) has occurred while \output is active [675] [676] [677] Underfull \vbox (badness 10000) has occurred while \output is active [678] [679] [680] Underfull \vbox (badness 10000) has occurred while \output is active [681] [682] [683] [684] [685] [686] [687] [688] Underfull \vbox (badness 10000) has occurred while \output is active [689] [690] Underfull \vbox (badness 10000) has occurred while \output is active [691] Underfull \vbox (badness 10000) has occurred while \output is active [692] [693] [694] [695] [696] Underfull \vbox (badness 10000) has occurred while \output is active [697] [698] [699] Underfull \vbox (badness 10000) has occurred while \output is active [700] [701] [702] [703] [704]) (./namespacemom__coms.tex [705] [706] [707] [708] [709] Underfull \hbox (badness 10000) detected at line 265 [][][] [710] Underfull \hbox (badness 10000) detected at line 301 [][][] Underfull \hbox (badness 10000) detected at line 342 [][][] [711] [712] [713] [714] Overfull \vbox (6.82013pt too high) has occurred while \output is active [715] [716] [717] Underfull \hbox (badness 10000) detected at line 788 [][][] [718] Underfull \vbox (badness 10000) has occurred while \output is active [719] [720] Underfull \hbox (badness 10000) detected at line 950 [][][] [721] [722] Underfull \hbox (badness 10000) detected at line 1090 [][][] [723] Underfull \vbox (badness 10000) has occurred while \output is active [724]) (./namespacemom__constants.tex) (./namespacemom__continuity.tex [725] Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [726] Overfull \vbox (5.65964pt too high) has occurred while \output is active [727] [728] [729] Underfull \hbox (badness 10000) detected at line 277 [][][] ) (./namespacemom__continuity__ppm.tex [730] [731] Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [732] [733] Underfull \vbox (badness 10000) has occurred while \output is active [734] [735] [736] [737] Underfull \hbox (badness 10000) detected at line 426 [][][] [738] [739] [740] [741] [742] [743] [744] Underfull \vbox (badness 10000) has occurred while \output is active [745] Underfull \hbox (badness 10000) in paragraph at lines 950--951 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional [746] [747] Underfull \vbox (badness 10000) has occurred while \output is active [748] Underfull \vbox (badness 10000) has occurred while \output is active [749] Underfull \vbox (badness 10000) has occurred while \output is active [750] [751] [752] [753] [754] Underfull \vbox (badness 10000) has occurred while \output is active [755] Underfull \vbox (badness 10000) has occurred while \output is active [756] [757] [758] Underfull \hbox (badness 10000) detected at line 1804 [][][] [759] [760] Underfull \vbox (badness 10000) has occurred while \output is active [761] [762] [763] Underfull \vbox (badness 10000) has occurred while \output is active [764] Underfull \hbox (badness 10000) in paragraph at lines 2258--2259 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional [765] [766] Underfull \hbox (badness 10000) in paragraph at lines 2406--2407 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), optional [767] [768] [769] Underfull \vbox (badness 10000) has occurred while \output is active [770] [771] [772] Underfull \hbox (badness 10000) in paragraph at lines 2756--2757 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional [773] [774] Underfull \vbox (badness 10000) has occurred while \output is active [775] Underfull \vbox (badness 10000) has occurred while \output is active [776] Underfull \vbox (badness 10000) has occurred while \output is active [777]) (./namespacemom__controlled__forcing.tex [778] Overfull \vbox (29.87068pt too high) has occurred while \output is active [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] Underfull \vbox (badness 10000) has occurred while \output is active [782] [783] [784] [785] Underfull \hbox (badness 10000) detected at line 537 [][][] Underfull \hbox (badness 10000) detected at line 574 [][][] [786] [787]) (./namespacemom__coord__initialization.tex [788] [789] [790] [791] [792] [793] [794] [795] Overfull \vbox (43.5485pt too high) has occurred while \output is active [796] [797] [798] Underfull \vbox (badness 10000) has occurred while \output is active [799]) (./namespacemom__coriolisadv.tex [800] [801] [802] [803] Underfull \vbox (badness 10000) has occurred while \output is active [804] Underfull \vbox (badness 10000) has occurred while \output is active [805] Underfull \vbox (badness 10000) has occurred while \output is active [806] Underfull \vbox (badness 10000) has occurred while \output is active [807] Underfull \vbox (badness 10000) has occurred while \output is active [808] Underfull \vbox (badness 10000) has occurred while \output is active [809] Underfull \vbox (badness 10000) has occurred while \output is active [810] Underfull \vbox (badness 10000) has occurred while \output is active [811] Underfull \vbox (badness 10000) has occurred while \output is active [812] [813] [814] Underfull \vbox (badness 10000) has occurred while \output is active [815] Underfull \vbox (badness 10000) has occurred while \output is active [816] Overfull \vbox (28.26488pt too high) has occurred while \output is active [817] [818]) (./namespacemom__cpu__clock.tex Underfull \hbox (badness 10000) detected at line 33 [][][] [819]) (./namespacemom__cvmix__conv.tex [820] [821] [822] [823] Underfull \vbox (badness 10000) has occurred while \output is active [824]) (./namespacemom__cvmix__ddiff.tex [825] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional Overfull \vbox (77.46162pt too high) has occurred while \output is active [826] [827] Underfull \vbox (badness 10000) has occurred while \output is active [828] [829] [830] [831]) (./namespacemom__cvmix__kpp.tex [832] [833] [834] Underfull \vbox (badness 10000) has occurred while \output is active [835] Underfull \vbox (badness 10000) has occurred while \output is active [836] Underfull \vbox (badness 10000) has occurred while \output is active [837] [838] [839] Underfull \vbox (badness 10000) has occurred while \output is active [840] Underfull \vbox (badness 10000) has occurred while \output is active [841] Underfull \vbox (badness 10000) has occurred while \output is active [842] Underfull \vbox (badness 10000) has occurred while \output is active [843] [844] [845] [846] Underfull \vbox (badness 10000) has occurred while \output is active [847] Underfull \vbox (badness 10000) has occurred while \output is active [848] Underfull \vbox (badness 10000) has occurred while \output is active [849] Underfull \vbox (badness 10000) has occurred while \output is active [850] Underfull \hbox (badness 10000) in paragraph at lines 1420--1421 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] Overfull \vbox (40.83766pt too high) has occurred while \output is active [851] Underfull \hbox (badness 10000) in paragraph at lines 1515--1516 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] [852] [853] [854]) (./namespacemom__cvmix__shear.tex [855] Overfull \vbox (65.14655pt too high) has occurred while \output is active [856] [857] [858] Underfull \hbox (badness 10000) detected at line 254 [][][] Underfull \vbox (badness 10000) has occurred while \output is active [859] [860]) (./namespacemom__debugging.tex [861] [862] [863] Overfull \vbox (14.49733pt too high) has occurred while \output is active [864] [865] [866] [867] [868] [869] [870] Overfull \vbox (0.46025pt too high) has occurred while \output is active [871] Underfull \vbox (badness 10000) has occurred while \output is active [872] [873] [874] [875] Underfull \vbox (badness 10000) has occurred while \output is active [876] [877] [878] [879] [880] [881] [882] Underfull \hbox (badness 10000) detected at line 1393 [][][] [883]) (./namespacemom__density__integrals.tex [884] [885] [886] [887] [888] [889] Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [890] [891] Underfull \vbox (badness 10000) has occurred while \output is active [892] Underfull \vbox (badness 10000) has occurred while \output is active [893] [894] [895] Underfull \vbox (badness 10000) has occurred while \output is active [896] Underfull \vbox (badness 10000) has occurred while \output is active [897] Underfull \vbox (badness 10000) has occurred while \output is active [898] Underfull \vbox (badness 10000) has occurred while \output is active [899] Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [900] [901] Underfull \vbox (badness 10000) has occurred while \output is active [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] Underfull \vbox (badness 10000) has occurred while \output is active [904] Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [905] [906] Underfull \vbox (badness 10000) has occurred while \output is active [907] Underfull \vbox (badness 10000) has occurred while \output is active [908] Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [909] [910] Underfull \vbox (badness 10000) has occurred while \output is active [911] Underfull \vbox (badness 10000) has occurred while \output is active [912] [913] [914]) (./namespacemom__diabatic__aux.tex [915] [916] [917] [918] [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] Underfull \vbox (badness 10000) has occurred while \output is active [921] Underfull \vbox (badness 10000) has occurred while \output is active [922] Underfull \vbox (badness 10000) has occurred while \output is active [923] Underfull \vbox (badness 10000) has occurred while \output is active [924] Underfull \vbox (badness 10000) has occurred while \output is active [925] [926] [927] Underfull \vbox (badness 10000) has occurred while \output is active [928] Overfull \vbox (26.02458pt too high) has occurred while \output is active [929] [930] [931] [932] Underfull \vbox (badness 10000) has occurred while \output is active [933] [934] [935] [936] [937] [938] [939] [940] [941] [942]) (./namespacemom__diabatic__driver.tex [943] [944] [945] Overfull \vbox (14.49553pt too high) has occurred while \output is active [946] [947] [948] Underfull \vbox (badness 10000) has occurred while \output is active [949] [950] [951] Underfull \vbox (badness 10000) has occurred while \output is active [952] Underfull \vbox (badness 10000) has occurred while \output is active [953] Underfull \vbox (badness 10000) has occurred while \output is active [954] Underfull \vbox (badness 10000) has occurred while \output is active [955] Underfull \vbox (badness 10000) has occurred while \output is active [956] Underfull \vbox (badness 10000) has occurred while \output is active [957] Underfull \vbox (badness 10000) has occurred while \output is active [958] Underfull \vbox (badness 10000) has occurred while \output is active [959] [960] [961] Underfull \vbox (badness 10000) has occurred while \output is active [962] Underfull \vbox (badness 10000) has occurred while \output is active [963] Underfull \vbox (badness 10000) has occurred while \output is active [964] Underfull \vbox (badness 10000) has occurred while \output is active [965] Underfull \vbox (badness 10000) has occurred while \output is active [966] Underfull \vbox (badness 10000) has occurred while \output is active [967] Underfull \vbox (badness 10000) has occurred while \output is active [968] Underfull \vbox (badness 10000) has occurred while \output is active [969] [970] [971] [972] Underfull \vbox (badness 10000) has occurred while \output is active [973] Underfull \vbox (badness 10000) has occurred while \output is active [974] Underfull \vbox (badness 10000) has occurred while \output is active [975] Underfull \vbox (badness 10000) has occurred while \output is active [976] Underfull \vbox (badness 10000) has occurred while \output is active [977] Underfull \vbox (badness 10000) has occurred while \output is active [978] [979] [980] [981] [982] Overfull \vbox (4.22563pt too high) has occurred while \output is active [983] [984] [985] [986] Underfull \vbox (badness 10000) has occurred while \output is active [987] Underfull \vbox (badness 10000) has occurred while \output is active [988] Underfull \vbox (badness 10000) has occurred while \output is active [989] Underfull \vbox (badness 10000) has occurred while \output is active [990] Underfull \vbox (badness 10000) has occurred while \output is active [991] Underfull \vbox (badness 10000) has occurred while \output is active [992] Underfull \vbox (badness 10000) has occurred while \output is active [993] Underfull \vbox (badness 10000) has occurred while \output is active [994] Underfull \vbox (badness 10000) has occurred while \output is active [995] Underfull \vbox (badness 10000) has occurred while \output is active [996] Underfull \vbox (badness 10000) has occurred while \output is active [997]) (./namespacemom__diag__manager__wrapper.tex [998] Underfull \hbox (badness 2626) in paragraph at lines 18--19 []\T1/phv/m/n/10 integer func-tion [][]register[]_[]diag[]_[]field[]_[]scalar[] _[]fms[][] (module[]_[]name, field[]_[]name, init[]_[]time, long[]_[]name, unit s, [999] [1000] [1001]) (./namespacemom__diag__mediator.tex [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] [1010] Underfull \vbox (badness 10000) has occurred while \output is active [1011] [1012] [1013] [1014] [1015] Underfull \vbox (badness 10000) has occurred while \output is active [1016] [1017] [1018] [1019] [1020] Overfull \vbox (19.73378pt too high) has occurred while \output is active [1021] [1022] [1023] Underfull \vbox (badness 10000) has occurred while \output is active [1024] [1025] Underfull \vbox (badness 10000) has occurred while \output is active [1026] Underfull \vbox (badness 10000) has occurred while \output is active [1027] [1028] [1029] Underfull \hbox (badness 10000) detected at line 1799 [][][] [1030] [1031] Underfull \vbox (badness 10000) has occurred while \output is active [1032] [1033] [1034] [1035] [1036] [1037] [1038] Underfull \vbox (badness 10000) has occurred while \output is active [1039] [1040] Overfull \hbox (36.1684pt too wide) in paragraph at lines 2562--2562 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [1041] Underfull \vbox (badness 10000) has occurred while \output is active [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) detected at line 3012 [][][] [1048] Overfull \vbox (7.75447pt too high) has occurred while \output is active [1049] [1050] Underfull \hbox (badness 10000) detected at line 3181 [][][] [1051] [1052] [1053] [1054] [1055] [1056] Underfull \vbox (badness 10000) has occurred while \output is active [1057] [1058] Underfull \vbox (badness 10000) has occurred while \output is active [1059] [1060] Underfull \vbox (badness 10000) has occurred while \output is active [1061] Overfull \vbox (24.95552pt too high) has occurred while \output is active [1062] Overfull \vbox (24.2831pt too high) has occurred while \output is active [1063] [1064] [1065] [1066] Underfull \vbox (badness 10000) has occurred while \output is active [1067] Underfull \vbox (badness 10000) has occurred while \output is active [1068] Overfull \vbox (10.18648pt too high) has occurred while \output is active [1069] [1070] [1071] [1072] Underfull \vbox (badness 10000) has occurred while \output is active [1073] [1074] Underfull \hbox (badness 10000) detected at line 4862 [][][] [1075] Underfull \vbox (badness 10000) has occurred while \output is active [1076] Underfull \hbox (badness 10000) detected at line 5014 [][][] [1077] [1078] Underfull \vbox (badness 10000) has occurred while \output is active [1079] [1080] Underfull \vbox (badness 10000) has occurred while \output is active [1081] Underfull \vbox (badness 10000) has occurred while \output is active [1082] [1083] [1084] Underfull \vbox (badness 10000) has occurred while \output is active [1085] [1086] [1087] [1088]) (./namespacemom__diag__remap.tex [1089] [1090] Overfull \vbox (15.70502pt too high) has occurred while \output is active [1091] Underfull \vbox (badness 10000) has occurred while \output is active [1092] [1093] [1094] Underfull \vbox (badness 10000) has occurred while \output is active [1095] Overfull \vbox (2.68217pt too high) has occurred while \output is active [1096] [1097] Underfull \hbox (badness 10000) detected at line 533 [][][] Overfull \vbox (57.59293pt too high) has occurred while \output is active [1098] [1099] [1100] Underfull \vbox (badness 10000) has occurred while \output is active [1101] Overfull \vbox (13.8649pt too high) has occurred while \output is active [1102] [1103] [1104]) (./namespacemom__diag__vkernels.tex [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112]) (./namespacemom__diagnostics.tex [1113] [1114] [1115] [1116] Underfull \vbox (badness 10000) has occurred while \output is active [1117] Underfull \vbox (badness 10000) has occurred while \output is active [1118] Underfull \vbox (badness 10000) has occurred while \output is active [1119] Underfull \vbox (badness 10000) has occurred while \output is active [1120] Underfull \vbox (badness 10000) has occurred while \output is active [1121] Underfull \vbox (badness 10000) has occurred while \output is active [1122] Underfull \vbox (badness 10000) has occurred while \output is active [1123] [1124] Underfull \vbox (badness 10000) has occurred while \output is active [1125] [1126] [1127] [1128] [1129] [1130] [1131] Underfull \vbox (badness 10000) has occurred while \output is active [1132] Underfull \vbox (badness 10000) has occurred while \output is active [1133] Underfull \vbox (badness 10000) has occurred while \output is active [1134] Underfull \vbox (badness 10000) has occurred while \output is active [1135] [1136] Overfull \vbox (29.00815pt too high) has occurred while \output is active [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] Underfull \vbox (badness 10000) has occurred while \output is active [1147] Underfull \vbox (badness 10000) has occurred while \output is active [1148]) (./namespacemom__diapyc__energy__req.tex [1149] [1150] Underfull \vbox (badness 10000) has occurred while \output is active [1151] Underfull \vbox (badness 10000) has occurred while \output is active [1152] Underfull \vbox (badness 10000) has occurred while \output is active [1153] Underfull \vbox (badness 10000) has occurred while \output is active [1154] Underfull \vbox (badness 10000) has occurred while \output is active [1155] Underfull \vbox (badness 10000) has occurred while \output is active [1156] Underfull \vbox (badness 10000) has occurred while \output is active [1157] Underfull \vbox (badness 10000) has occurred while \output is active [1158] Underfull \vbox (badness 10000) has occurred while \output is active [1159] Underfull \vbox (badness 10000) has occurred while \output is active [1160] [1161] [1162] [1163] [1164] [1165] [1166] Underfull \vbox (badness 10000) has occurred while \output is active [1167] [1168] Underfull \vbox (badness 10000) has occurred while \output is active [1169] [1170]) (./namespacemom__document.tex [1171] [1172] [1173] Underfull \vbox (badness 10000) has occurred while \output is active [1174] [1175] [1176] [1177] [1178] Overfull \vbox (57.30919pt too high) has occurred while \output is active [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] Underfull \hbox (badness 10000) detected at line 1389 [][][] [1193] [1194] [1195] [1196] [1197] Underfull \vbox (badness 10000) has occurred while \output is active [1198]) (./namespacemom__domains.tex [1199] [1200] [1201] [1202] [1203] Underfull \vbox (badness 10000) has occurred while \output is active [1204] [1205] [1206] Overfull \vbox (1.22655pt too high) has occurred while \output is active [1207] [1208] [1209] [1210] [1211] [1212] [1213] [1214] [1215] [1216] [1217] [1218] [1219] [1220] Underfull \vbox (badness 10000) has occurred while \output is active [1221] Underfull \vbox (badness 10000) has occurred while \output is active [1222] Underfull \vbox (badness 10000) has occurred while \output is active [1223] Underfull \vbox (badness 10000) has occurred while \output is active [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] Underfull \hbox (badness 10000) detected at line 2078 [][][] [1232] Underfull \hbox (badness 10000) detected at line 2155 [][][] [1233] [1234] [1235] [1236] [1237] [1238] [1239] Underfull \hbox (badness 10000) detected at line 2578 [][][] [1240] [1241] Underfull \hbox (badness 10000) detected at line 2668 [][][] [1242]) (./namespacemom__dyn__horgrid.tex [1243] Underfull \hbox (badness 10000) detected at line 42 [][][] [1244] [1245] [1246] [1247] [1248]) (./namespacemom__dynamics__split__rk2.tex [1249] Underfull \vbox (badness 10000) has occurred while \output is active [1250] Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), target Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(inout), target [1251] [1252] [1253] Underfull \vbox (badness 10000) has occurred while \output is active [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] Underfull \vbox (badness 10000) has occurred while \output is active [1257] Underfull \vbox (badness 10000) has occurred while \output is active [1258] [1259] [1260] [1261] Underfull \vbox (badness 10000) has occurred while \output is active [1262] Underfull \vbox (badness 10000) has occurred while \output is active [1263] Underfull \vbox (badness 10000) has occurred while \output is active [1264] Underfull \vbox (badness 10000) has occurred while \output is active [1265] Underfull \vbox (badness 10000) has occurred while \output is active [1266] Underfull \vbox (badness 10000) has occurred while \output is active [1267] Underfull \vbox (badness 10000) has occurred while \output is active [1268] Underfull \vbox (badness 10000) has occurred while \output is active [1269]) (./namespacemom__dynamics__unsplit.tex [1270] [1271] [1272] [1273] Underfull \vbox (badness 10000) has occurred while \output is active [1274] [1275] [1276] [1277] [1278] Underfull \vbox (badness 10000) has occurred while \output is active [1279] Underfull \vbox (badness 10000) has occurred while \output is active [1280] Underfull \vbox (badness 10000) has occurred while \output is active [1281]) (./namespacemom__dynamics__unsplit__rk2.tex [1282] [1283] [1284] [1285] Underfull \vbox (badness 10000) has occurred while \output is active [1286] Overfull \vbox (34.51509pt too high) has occurred while \output is active [1287] [1288] [1289] Underfull \vbox (badness 10000) has occurred while \output is active [1290] Underfull \vbox (badness 10000) has occurred while \output is active [1291] Underfull \vbox (badness 10000) has occurred while \output is active [1292]) (./namespaceMOM__energetic__PBL.tex) (./namespacemom__energetic__pbl.tex [1293] [1294] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] [1295] [1296] Underfull \vbox (badness 10000) has occurred while \output is active [1297] Underfull \vbox (badness 10000) has occurred while \output is active [1298] Underfull \vbox (badness 10000) has occurred while \output is active [1299] [1300] [1301] [1302] Underfull \vbox (badness 10000) has occurred while \output is active [1303] Underfull \vbox (badness 10000) has occurred while \output is active [1304] Underfull \vbox (badness 10000) has occurred while \output is active [1305] Underfull \vbox (badness 10000) has occurred while \output is active [1306] Underfull \vbox (badness 10000) has occurred while \output is active [1307] [1308] [1309] Underfull \vbox (badness 10000) has occurred while \output is active [1310] Underfull \vbox (badness 10000) has occurred while \output is active [1311] Underfull \vbox (badness 10000) has occurred while \output is active [1312] Underfull \vbox (badness 10000) has occurred while \output is active [1313] Underfull \vbox (badness 10000) has occurred while \output is active [1314] Underfull \vbox (badness 10000) has occurred while \output is active [1315] Underfull \vbox (badness 10000) has occurred while \output is active [1316] Underfull \vbox (badness 10000) has occurred while \output is active [1317] Underfull \vbox (badness 10000) has occurred while \output is active [1318] Underfull \vbox (badness 10000) has occurred while \output is active [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] Underfull \vbox (badness 10000) has occurred while \output is active [1322] [1323] [1324] Underfull \vbox (badness 10000) has occurred while \output is active [1325] [1326] [1327] [1328] Underfull \vbox (badness 10000) has occurred while \output is active [1329] [1330] [1331] [1332] [1333]) (./namespacemom__entrain__diffusive.tex [1334] [1335] Underfull \vbox (badness 10000) has occurred while \output is active [1336] [1337] Underfull \vbox (badness 10000) has occurred while \output is active [1338] [1339] [1340] [1341] Underfull \vbox (badness 10000) has occurred while \output is active [1342] [1343] [1344] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 integer, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), inten t(inout), optional \T1/pcr/m/sl/8 kb[]_[] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 Kd[]_[][] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in), optional [1345] [1346] Underfull \vbox (badness 10000) has occurred while \output is active [1347] Underfull \vbox (badness 10000) has occurred while \output is active [1348] Underfull \vbox (badness 10000) has occurred while \output is active [1349] Underfull \vbox (badness 10000) has occurred while \output is active [1350] Underfull \vbox (badness 10000) has occurred while \output is active [1351] Underfull \vbox (badness 10000) has occurred while \output is active [1352] Underfull \vbox (badness 10000) has occurred while \output is active [1353] Underfull \vbox (badness 10000) has occurred while \output is active [1354] Underfull \vbox (badness 10000) has occurred while \output is active [1355] Underfull \vbox (badness 10000) has occurred while \output is active [1356] [1357] Underfull \vbox (badness 10000) has occurred while \output is active [1358] [1359] [1360] [1361] [1362] Underfull \vbox (badness 10000) has occurred while \output is active [1363] Underfull \vbox (badness 10000) has occurred while \output is active [1364] Underfull \vbox (badness 10000) has occurred while \output is active [1365] [1366] [1367] Underfull \vbox (badness 10000) has occurred while \output is active [1368]) (./namespacemom__eos.tex [1369] [1370] [1371] [1372] Underfull \vbox (badness 10000) has occurred while \output is active [1373] [1374] [1375] [1376] [1377] [1378] [1379] Overfull \vbox (21.86925pt too high) has occurred while \output is active [1380] [1381] Overfull \vbox (45.78584pt too high) has occurred while \output is active [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] [1395] [1396] [1397] [1398] [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 10000) detected at line 2146 [][][] [1404] [1405] [1406] [1407] [1408] Underfull \hbox (badness 10000) detected at line 2431 [][][] Overfull \vbox (47.24054pt too high) has occurred while \output is active [1409] Underfull \vbox (badness 10000) has occurred while \output is active [1410]) (./namespacemom__eos__linear.tex [1411] [1412] Overfull \vbox (1.44406pt too high) has occurred while \output is active [1413] Underfull \vbox (badness 10000) has occurred while \output is active [1414] Underfull \vbox (badness 10000) has occurred while \output is active [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] Underfull \vbox (badness 10000) has occurred while \output is active [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428]) (./namespacemom__eos__nemo.tex [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./namespacemom__eos__teos10.tex [1441] [1442] [1443] [1444] [1445] [1446] Overfull \vbox (69.66199pt too high) has occurred while \output is active [1447] Underfull \vbox (badness 10000) has occurred while \output is active [1448] [1449] [1450]) (./namespacemom__eos__unesco.tex [1451] [1452] [1453] [1454] [1455] [1456] [1457] Overfull \vbox (42.16423pt too high) has occurred while \output is active [1458] [1459] Overfull \vbox (6.26321pt too high) has occurred while \output is active [1460]) (./namespacemom__eos__wright.tex [1461] [1462] Overfull \vbox (34.43738pt too high) has occurred while \output is active [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] Underfull \vbox (badness 10000) has occurred while \output is active [1475] [1476] [1477] Underfull \vbox (badness 10000) has occurred while \output is active [1478] Underfull \vbox (badness 10000) has occurred while \output is active [1479]) (./namespacemom__error__handler.tex [1480] [1481] [1482] [1483] [1484] [1485]) (./namespacemom__file__parser.tex [1486] [1487] Underfull \hbox (badness 2065) in paragraph at lines 82--83 []\T1/phv/m/n/10 subroutine [][]log[]_[]param[]_[]int[]_[]array[][] (CS, mod-u- le-name, var-name, value, desc, units, de-fault, layout[]Param, [1488] [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 10000) detected at line 398 [][][] [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] Underfull \vbox (badness 10000) has occurred while \output is active [1508] Underfull \vbox (badness 10000) has occurred while \output is active [1509] Underfull \vbox (badness 10000) has occurred while \output is active [1510] [1511] Overfull \vbox (31.06355pt too high) has occurred while \output is active [1512] [1513] [1514] [1515] [1516] [1517] [1518] [1519] Underfull \vbox (badness 10000) has occurred while \output is active [1520] [1521] Underfull \vbox (badness 10000) has occurred while \output is active [1522] [1523] [1524] [1525] [1526] [1527] [1528] [1529] [1530] [1531] Overfull \vbox (16.03447pt too high) has occurred while \output is active [1532] [1533] [1534] [1535] Underfull \vbox (badness 10000) has occurred while \output is active [1536] [1537] [1538]) (./namespacemom__fixed__initialization.tex [1539] [1540] [1541] [1542]) (./namespacemom__forcing__type.tex [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(inout) \T1/pcr/m/sl/8 buoyancy[] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 net[]Heat[] [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] Underfull \vbox (badness 10000) has occurred while \output is active [1560] Underfull \vbox (badness 10000) has occurred while \output is active [1561] Underfull \vbox (badness 10000) has occurred while \output is active [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] Underfull \vbox (badness 10000) has occurred while \output is active [1564] [1565] [1566] [1567] [1568] Underfull \vbox (badness 10000) has occurred while \output is active [1569] [1570] [1571] Underfull \vbox (badness 10000) has occurred while \output is active [1572] Underfull \vbox (badness 10000) has occurred while \output is active [1573] Underfull \vbox (badness 10000) has occurred while \output is active [1574] Underfull \vbox (badness 10000) has occurred while \output is active [1575] Underfull \vbox (badness 10000) has occurred while \output is active [1576] Underfull \vbox (badness 10000) has occurred while \output is active [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] Underfull \vbox (badness 10000) has occurred while \output is active [1589] Underfull \vbox (badness 10000) has occurred while \output is active [1590] Underfull \vbox (badness 10000) has occurred while \output is active [1591] Underfull \vbox (badness 10000) has occurred while \output is active [1592] Underfull \vbox (badness 10000) has occurred while \output is active [1593] Underfull \vbox (badness 10000) has occurred while \output is active [1594] Underfull \vbox (badness 10000) has occurred while \output is active [1595] [1596] [1597] [1598] [1599] [1600]) (./namespacemom__full__convection.tex [1601] [1602] Underfull \vbox (badness 10000) has occurred while \output is active [1603] Underfull \vbox (badness 10000) has occurred while \output is active [1604] [1605] Underfull \hbox (badness 10000) detected at line 362 [][][] [1606] Overfull \vbox (25.10631pt too high) has occurred while \output is active [1607] [1608]) (./namespacemom__generic__tracer.tex [1609] [1610] [1611] Underfull \vbox (badness 10000) has occurred while \output is active [1612] [1613] [1614] [1615] Underfull \vbox (badness 10000) has occurred while \output is active [1616] [1617] [1618] Underfull \hbox (badness 10000) detected at line 648 [][][] [1619] Overfull \vbox (42.70247pt too high) has occurred while \output is active [1620] Underfull \hbox (badness 10000) detected at line 763 [][][] [1621] [1622] [1623] Underfull \vbox (badness 10000) has occurred while \output is active [1624]) (./namespacemom__geothermal.tex [1625] Underfull \vbox (badness 10000) has occurred while \output is active [1626] [1627] Underfull \vbox (badness 10000) has occurred while \output is active [1628] Underfull \vbox (badness 10000) has occurred while \output is active [1629] [1630] [1631] Underfull \vbox (badness 10000) has occurred while \output is active [1632] [1633] Underfull \vbox (badness 10000) has occurred while \output is active [1634]) (./namespacemom__get__input.tex [1635] [1636]) (./namespacemom__grid.tex [1637] [1638] Underfull \hbox (badness 10000) detected at line 70 [][][] [1639] [1640] [1641] [1642] [1643] Underfull \vbox (badness 10000) has occurred while \output is active [1644] [1645] [1646]) (./namespacemom__grid__initialize.tex [1647] [1648] Underfull \hbox (badness 10000) detected at line 72 [][][] [1649] Overfull \vbox (10.33813pt too high) has occurred while \output is active [1650] [1651] [1652] [1653] Underfull \hbox (badness 10000) detected at line 347 [][][] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] Underfull \vbox (badness 10000) has occurred while \output is active [1665] Underfull \vbox (badness 10000) has occurred while \output is active [1666] [1667] Underfull \vbox (badness 10000) has occurred while \output is active [1668] Underfull \vbox (badness 10000) has occurred while \output is active [1669] [1670] Underfull \vbox (badness 10000) has occurred while \output is active [1671]) (./namespacemom__hor__index.tex [1672] [1673] [1674]) (./namespacemom__hor__visc.tex [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] Underfull \vbox (badness 10000) has occurred while \output is active [1683] Underfull \vbox (badness 10000) has occurred while \output is active [1684] Underfull \vbox (badness 10000) has occurred while \output is active [1685] Underfull \vbox (badness 10000) has occurred while \output is active [1686] Underfull \vbox (badness 10000) has occurred while \output is active [1687] Underfull \vbox (badness 10000) has occurred while \output is active [1688] Underfull \vbox (badness 10000) has occurred while \output is active [1689] Underfull \vbox (badness 10000) has occurred while \output is active [1690] [1691] [1692] Underfull \vbox (badness 10000) has occurred while \output is active [1693] Underfull \vbox (badness 10000) has occurred while \output is active [1694] Underfull \vbox (badness 10000) has occurred while \output is active [1695] Underfull \vbox (badness 10000) has occurred while \output is active [1696] Underfull \vbox (badness 10000) has occurred while \output is active [1697] Underfull \vbox (badness 10000) has occurred while \output is active [1698] Underfull \vbox (badness 10000) has occurred while \output is active [1699] Underfull \vbox (badness 10000) has occurred while \output is active [1700] Underfull \vbox (badness 10000) has occurred while \output is active [1701] Underfull \vbox (badness 10000) has occurred while \output is active [1702] Underfull \vbox (badness 10000) has occurred while \output is active [1703] Underfull \vbox (badness 10000) has occurred while \output is active [1704] Underfull \vbox (badness 10000) has occurred while \output is active [1705] Underfull \vbox (badness 10000) has occurred while \output is active [1706] [1707] [1708]) (./namespacemom__horizontal__regridding.tex [1709] Underfull \hbox (badness 10000) in paragraph at lines 79--80 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [1710] [1711] [1712] Underfull \vbox (badness 10000) has occurred while \output is active [1713] [1714] [1715] Underfull \vbox (badness 10000) has occurred while \output is active [1716] Underfull \vbox (badness 10000) has occurred while \output is active [1717] Underfull \vbox (badness 10000) has occurred while \output is active [1718] [1719] [1720] Underfull \vbox (badness 10000) has occurred while \output is active [1721] Underfull \vbox (badness 10000) has occurred while \output is active [1722] Underfull \vbox (badness 10000) has occurred while \output is active [1723] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 x[] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 y[] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] [1724] Overfull \vbox (13.0991pt too high) has occurred while \output is active [1725] Overfull \vbox (52.21524pt too high) has occurred while \output is active [1726]) (./namespacemom__ice__shelf.tex [1727] [1728] [1729] [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] Underfull \vbox (badness 10000) has occurred while \output is active [1739] Underfull \vbox (badness 10000) has occurred while \output is active [1740] Underfull \vbox (badness 10000) has occurred while \output is active [1741] Underfull \vbox (badness 10000) has occurred while \output is active [1742] Underfull \vbox (badness 10000) has occurred while \output is active [1743] Underfull \vbox (badness 10000) has occurred while \output is active [1744] [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Underfull \vbox (badness 10000) has occurred while \output is active [1749] Underfull \vbox (badness 10000) has occurred while \output is active [1750] Underfull \vbox (badness 10000) has occurred while \output is active [1751] Underfull \vbox (badness 10000) has occurred while \output is active [1752] [1753] [1754] [1755]) (./namespacemom__ice__shelf__dynamics.tex [1756] [1757] [1758] Underfull \vbox (badness 10000) has occurred while \output is active [1759] [1760] [1761] [1762] [1763] [1764] Underfull \vbox (badness 10000) has occurred while \output is active [1765] Underfull \vbox (badness 10000) has occurred while \output is active [1766] [1767] [1768] [1769] [1770] Underfull \vbox (badness 10000) has occurred while \output is active [1771] [1772] [1773] [1774] [1775] [1776] Underfull \vbox (badness 10000) has occurred while \output is active [1777] Overfull \vbox (13.57463pt too high) has occurred while \output is active [1778] [1779] [1780] [1781] Overfull \vbox (35.12973pt too high) has occurred while \output is active [1782] [1783] Overfull \vbox (30.19351pt too high) has occurred while \output is active [1784] [1785] [1786] Underfull \vbox (badness 10000) has occurred while \output is active [1787] Underfull \vbox (badness 10000) has occurred while \output is active [1788] Underfull \vbox (badness 10000) has occurred while \output is active [1789] [1790] Underfull \vbox (badness 10000) has occurred while \output is active [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] Overfull \vbox (1.09367pt too high) has occurred while \output is active [1793] [1794] Underfull \hbox (badness 10000) detected at line 2775 [][][] [1795] [1796] [1797] [1798] Underfull \vbox (badness 10000) has occurred while \output is active [1799] Underfull \vbox (badness 10000) has occurred while \output is active [1800] Underfull \vbox (badness 10000) has occurred while \output is active [1801] Underfull \vbox (badness 10000) has occurred while \output is active [1802] [1803] [1804] [1805] [1806] Overfull \vbox (22.12805pt too high) has occurred while \output is active [1807] [1808] Underfull \vbox (badness 10000) has occurred while \output is active [1809] [1810] [1811] [1812] [1813] [1814] Underfull \vbox (badness 10000) has occurred while \output is active [1815]) (./namespacemom__ice__shelf__initialize.tex [1816] [1817] [1818] [1819] [1820]) (./namespacemom__ice__shelf__state.tex [1821]) (./namespacemom__int__tide__input.tex [1822] [1823] [1824] [1825] [1826] Underfull \vbox (badness 10000) has occurred while \output is active [1827] [1828] [1829]) (./namespacemom__interface__heights.tex [1830] [1831] Underfull \vbox (badness 10000) has occurred while \output is active [1832] [1833] Underfull \vbox (badness 10000) has occurred while \output is active [1834]) (./namespacemom__internal__tides.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [1835] Overfull \vbox (36.89885pt too high) has occurred while \output is active [1836] [1837] [1838] [1839] Underfull \vbox (badness 10000) has occurred while \output is active [1840] Underfull \vbox (badness 10000) has occurred while \output is active [1841] Underfull \vbox (badness 10000) has occurred while \output is active [1842] Underfull \vbox (badness 10000) has occurred while \output is active [1843] Underfull \vbox (badness 10000) has occurred while \output is active [1844] Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(inout) Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(out) \T1/pcr/m/sl/8 T[] [1845] [1846] [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \vbox (badness 10000) has occurred while \output is active [1857] Underfull \vbox (badness 10000) has occurred while \output is active [1858] Underfull \vbox (badness 10000) has occurred while \output is active [1859] [1860] Underfull \vbox (badness 10000) has occurred while \output is active [1861] Underfull \vbox (badness 10000) has occurred while \output is active [1862] Underfull \vbox (badness 10000) has occurred while \output is active [1863] Underfull \vbox (badness 10000) has occurred while \output is active [1864] Underfull \vbox (badness 10000) has occurred while \output is active [1865] Overfull \vbox (21.70555pt too high) has occurred while \output is active [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876]) (./namespacemom__intrinsic__functions.tex [1877]) (./namespacemom__io.tex [1878] [1879] [1880] Underfull \hbox (badness 10000) detected at line 94 [][][] Overfull \vbox (81.31973pt too high) has occurred while \output is active [1881] [1882] Underfull \vbox (badness 10000) has occurred while \output is active [1883] Underfull \vbox (badness 10000) has occurred while \output is active [1884] Underfull \hbox (badness 10000) detected at line 426 [][][] [1885] [1886] [1887] [1888] [1889] [1890] [1891] [1892] [1893] [1894] Underfull \hbox (badness 10000) detected at line 1056 [][][] [1895] Underfull \vbox (badness 10000) has occurred while \output is active [1896] [1897] [1898] [1899] Underfull \vbox (badness 10000) has occurred while \output is active [1900] [1901] [1902] Underfull \hbox (badness 10000) detected at line 1523 [][][] ) (./namespacemom__isopycnal__slopes.tex [1903] Overfull \vbox (20.40102pt too high) has occurred while \output is active [1904] [1905] Underfull \vbox (badness 10000) has occurred while \output is active [1906] Underfull \vbox (badness 10000) has occurred while \output is active [1907] Underfull \vbox (badness 10000) has occurred while \output is active [1908] [1909] [1910]) (./namespacemom__kappa__shear.tex [1911] [1912] [1913] [1914] Underfull \vbox (badness 10000) has occurred while \output is active [1915] Underfull \vbox (badness 10000) has occurred while \output is active [1916] [1917] [1918] Underfull \vbox (badness 10000) has occurred while \output is active [1919] Underfull \vbox (badness 10000) has occurred while \output is active [1920] [1921] [1922] Underfull \vbox (badness 10000) has occurred while \output is active [1923] [1924] [1925] Underfull \vbox (badness 10000) has occurred while \output is active [1926] Underfull \vbox (badness 10000) has occurred while \output is active [1927] Underfull \vbox (badness 10000) has occurred while \output is active [1928] Underfull \vbox (badness 10000) has occurred while \output is active [1929] Underfull \vbox (badness 10000) has occurred while \output is active [1930] Underfull \vbox (badness 10000) has occurred while \output is active [1931] [1932] [1933] [1934] Underfull \vbox (badness 10000) has occurred while \output is active [1935] Underfull \vbox (badness 10000) has occurred while \output is active [1936] Underfull \vbox (badness 10000) has occurred while \output is active [1937] Underfull \vbox (badness 10000) has occurred while \output is active [1938] [1939] Underfull \hbox (badness 10000) detected at line 2018 [][][] [1940] Underfull \vbox (badness 10000) has occurred while \output is active [1941] [1942]) (./namespacemom__lateral__boundary__diffusion.tex [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] Underfull \vbox (badness 10000) has occurred while \output is active [1951] Underfull \vbox (badness 10000) has occurred while \output is active [1952] [1953] [1954] Underfull \vbox (badness 10000) has occurred while \output is active [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] Underfull \vbox (badness 10000) has occurred while \output is active [1959] [1960] [1961] Underfull \vbox (badness 10000) has occurred while \output is active [1962] Underfull \vbox (badness 10000) has occurred while \output is active [1963] Underfull \vbox (badness 10000) has occurred while \output is active [1964] Underfull \vbox (badness 10000) has occurred while \output is active [1965] [1966]) (./namespacemom__lateral__mixing__coeffs.tex [1967] [1968] [1969] [1970] [1971] Underfull \vbox (badness 10000) has occurred while \output is active [1972] [1973] Underfull \vbox (badness 10000) has occurred while \output is active [1974] Underfull \vbox (badness 10000) has occurred while \output is active [1975] [1976] [1977] [1978] Underfull \vbox (badness 10000) has occurred while \output is active [1979] [1980] [1981] Underfull \vbox (badness 10000) has occurred while \output is active [1982] [1983] [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] Underfull \vbox (badness 10000) has occurred while \output is active [1986] Underfull \vbox (badness 10000) has occurred while \output is active [1987] Underfull \vbox (badness 10000) has occurred while \output is active [1988]) (./namespacemom__marine__ice.tex [1989] [1990] [1991] Overfull \vbox (43.3866pt too high) has occurred while \output is active [1992]) (./namespacemom__meke.tex [1993] [1994] [1995] [1996] [1997] [1998] [1999] [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] [2002] [2003] [2004] Underfull \vbox (badness 10000) has occurred while \output is active [2005] Underfull \vbox (badness 10000) has occurred while \output is active [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] Underfull \vbox (badness 10000) has occurred while \output is active [2013] Underfull \vbox (badness 10000) has occurred while \output is active [2014] Underfull \vbox (badness 10000) has occurred while \output is active [2015] Underfull \vbox (badness 10000) has occurred while \output is active [2016] Underfull \vbox (badness 10000) has occurred while \output is active [2017] Underfull \vbox (badness 10000) has occurred while \output is active [2018]) (./namespacemom__mixed__layer__restrat.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. [2019] [2020] [2021] [2022] Underfull \vbox (badness 10000) has occurred while \output is active [2023] [2024] Underfull \vbox (badness 10000) has occurred while \output is active [2025] [2026] [2027] Underfull \vbox (badness 10000) has occurred while \output is active [2028] Underfull \vbox (badness 10000) has occurred while \output is active [2029] Underfull \vbox (badness 10000) has occurred while \output is active [2030] Underfull \vbox (badness 10000) has occurred while \output is active [2031] Underfull \vbox (badness 10000) has occurred while \output is active [2032] [2033] Underfull \vbox (badness 10000) has occurred while \output is active [2034] [2035]) (./namespacemom__neutral__diffusion.tex [2036] [2037] Overfull \hbox (120.57199pt too wide) in paragraph at lines 53--53 []\T1/phv/m/sl/9 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/9 ^^A\OML/cmm/m/it/9 ^^Z \OT1/cmr/m/n/9 = [] []$\T1/phv/m /sl/9 . [2038] Underfull \hbox (badness 10000) detected at line 122 [][][] [2039] Underfull \hbox (badness 10000) detected at line 170 [][][] [2040] [2041] [2042] Overfull \hbox (132.78908pt too wide) in paragraph at lines 352--353 []\T1/phv/m/n/10 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/10 ^^A\OML/cmm/m/it/10 ^^Z \OT1/cmr/m/n/10 = [] []$\T1/ph v/m/n/10 . [2043] Underfull \hbox (badness 10000) detected at line 432 [][][] [2044] Underfull \vbox (badness 10000) has occurred while \output is active [2045] [2046] Underfull \hbox (badness 10000) detected at line 573 [][][] [2047] [2048] [2049] Underfull \vbox (badness 10000) has occurred while \output is active [2050] Underfull \vbox (badness 10000) has occurred while \output is active [2051] [2052] [2053] Underfull \vbox (badness 10000) has occurred while \output is active [2054] Underfull \vbox (badness 10000) has occurred while \output is active [2055] Underfull \vbox (badness 10000) has occurred while \output is active [2056] [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \vbox (badness 10000) has occurred while \output is active [2064] Underfull \vbox (badness 10000) has occurred while \output is active [2065] Underfull \vbox (badness 10000) has occurred while \output is active [2066] [2067] Underfull \vbox (badness 10000) has occurred while \output is active [2068] Underfull \vbox (badness 10000) has occurred while \output is active [2069] [2070] [2071] Underfull \vbox (badness 10000) has occurred while \output is active [2072] [2073] [2074] [2075] Underfull \vbox (badness 10000) has occurred while \output is active [2076] Underfull \vbox (badness 10000) has occurred while \output is active [2077] [2078] [2079] Underfull \vbox (badness 10000) has occurred while \output is active [2080] [2081] [2082] Underfull \vbox (badness 10000) has occurred while \output is active [2083] [2084] [2085] [2086] [2087] [2088] [2089] [2090] [2091] [2092] [2093] [2094] [2095] [2096] [2097] [2098] [2099] [2100]) (./namespacemom__obsolete__diagnostics.tex [2101] [2102]) (./namespacemom__obsolete__params.tex [2103] [2104] [2105] [2106] [2107]) (./namespacemom__ocmip2__cfc.tex [2108] [2109] [2110] [2111] [2112] Overfull \vbox (4.64684pt too high) has occurred while \output is active [2113] [2114] [2115] Underfull \hbox (badness 10000) detected at line 445 [][][] [2116] [2117] [2118] Underfull \vbox (badness 10000) has occurred while \output is active [2119] Underfull \vbox (badness 10000) has occurred while \output is active [2120]) (./namespaceMOM__oda__driver__mod.tex) (./namespacemom__oda__driver__mod.tex [2121] [2122] [2123] [2124] [2125] Underfull \vbox (badness 10000) has occurred while \output is active [2126] Underfull \vbox (badness 10000) has occurred while \output is active [2127] [2128] [2129] Overfull \vbox (67.32932pt too high) has occurred while \output is active [2130]) (./namespacemom__offline__aux.tex [2131] Overfull \vbox (15.37663pt too high) has occurred while \output is active [2132] [2133] [2134] [2135] [2136] [2137] Overfull \vbox (5.58195pt too high) has occurred while \output is active [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \vbox (badness 10000) has occurred while \output is active [2148]) (./namespacemom__offline__main.tex [2149] [2150] [2151] [2152] Overfull \vbox (11.18053pt too high) has occurred while \output is active [2153] Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isdb[]: cs%g %iedb, cs%g %jsd[]: cs%g % jed, cs%g %ke), intent(inout) Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isd[]: cs%g %ied, cs%g %jsdb[]: cs%g %j edb, cs%g %ke), intent(inout) [2154] [2155] Underfull \vbox (badness 10000) has occurred while \output is active [2156] [2157] [2158] Underfull \vbox (badness 10000) has occurred while \output is active [2159] [2160] [2161] [2162] [2163] [2164] [2165] Underfull \vbox (badness 10000) has occurred while \output is active [2166] [2167] [2168] Underfull \vbox (badness 10000) has occurred while \output is active [2169] Underfull \vbox (badness 10000) has occurred while \output is active [2170] [2171] [2172] [2173] [2174] [2175]) (./namespacemom__opacity.tex [2176] [2177] [2178] [2179] Underfull \vbox (badness 10000) has occurred while \output is active [2180] Underfull \vbox (badness 10000) has occurred while \output is active [2181] Underfull \vbox (badness 10000) has occurred while \output is active [2182] Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied, gv %ke ), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied), inten t(out), optional \T1/pcr/m/sl/8 pen[]S[]W[] [2183] [2184] Underfull \hbox (badness 10000) in paragraph at lines 548--549 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional Overfull \vbox (50.97925pt too high) has occurred while \output is active [2185] [2186] Underfull \vbox (badness 10000) has occurred while \output is active [2187] [2188] Underfull \vbox (badness 10000) has occurred while \output is active [2189] Underfull \vbox (badness 10000) has occurred while \output is active [2190] Underfull \hbox (badness 10000) detected at line 1009 [][][] [2191] Underfull \hbox (badness 10000) detected at line 1039 [][][] Underfull \hbox (badness 10000) detected at line 1079 [][][] Underfull \hbox (badness 10000) in paragraph at lines 1098--1099 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional [2192] [2193] Underfull \vbox (badness 10000) has occurred while \output is active [2194] [2195] [2196] [2197] Underfull \hbox (badness 10000) detected at line 1460 [][][] ) (./namespacemom__open__boundary.tex [2198] [2199] [2200] Underfull \hbox (badness 862) in paragraph at lines 120--121 []\T1/phv/m/n/10 subroutine, pub-lic [][]open[]_[]boundary[]_[]register[]_[]res tarts[][] (HI, GV, O[]BC, Reg, param[]_[]file, restart[]_[][]C[]Sp, use[]_[] [2201] Underfull \hbox (badness 10000) detected at line 187 [][][] [2202] Underfull \vbox (badness 10000) has occurred while \output is active [2203] [2204] [2205] Underfull \vbox (badness 10000) has occurred while \output is active [2206] [2207] [2208] [2209] [2210] [2211] Underfull \vbox (badness 10000) has occurred while \output is active [2212] [2213] [2214] Underfull \vbox (badness 10000) has occurred while \output is active [2215] Underfull \vbox (badness 10000) has occurred while \output is active [2216] Underfull \vbox (badness 10000) has occurred while \output is active [2217] [2218] [2219] Underfull \vbox (badness 10000) has occurred while \output is active [2220] [2221] Overfull \vbox (39.93549pt too high) has occurred while \output is active [2222] [2223] Underfull \vbox (badness 10000) has occurred while \output is active [2224] Underfull \vbox (badness 10000) has occurred while \output is active [2225] [2226] [2227] [2228] [2229] Underfull \vbox (badness 10000) has occurred while \output is active [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \vbox (badness 10000) has occurred while \output is active [2241] [2242] Underfull \vbox (badness 10000) has occurred while \output is active [2243] [2244] Underfull \vbox (badness 10000) has occurred while \output is active [2245] Underfull \vbox (badness 10000) has occurred while \output is active [2246] Underfull \vbox (badness 10000) has occurred while \output is active [2247] Underfull \vbox (badness 10000) has occurred while \output is active [2248] Underfull \vbox (badness 10000) has occurred while \output is active [2249] Underfull \vbox (badness 10000) has occurred while \output is active [2250] Underfull \vbox (badness 10000) has occurred while \output is active [2251] Underfull \vbox (badness 10000) has occurred while \output is active [2252] Underfull \vbox (badness 10000) has occurred while \output is active [2253] Underfull \vbox (badness 10000) has occurred while \output is active [2254] Underfull \vbox (badness 10000) has occurred while \output is active [2255] Underfull \vbox (badness 10000) has occurred while \output is active [2256] Underfull \vbox (badness 10000) has occurred while \output is active [2257] [2258] [2259] [2260] [2261] [2262] [2263] Overfull \vbox (46.04994pt too high) has occurred while \output is active [2264] [2265] [2266] [2267] [2268] [2269] [2270] Underfull \vbox (badness 10000) has occurred while \output is active [2271] [2272] Underfull \vbox (badness 10000) has occurred while \output is active [2273] Overfull \vbox (6.87355pt too high) has occurred while \output is active [2274] [2275] [2276] [2277] [2278] Underfull \vbox (badness 10000) has occurred while \output is active [2279] Underfull \vbox (badness 10000) has occurred while \output is active [2280] Underfull \vbox (badness 10000) has occurred while \output is active [2281] Underfull \vbox (badness 10000) has occurred while \output is active [2282] Underfull \vbox (badness 10000) has occurred while \output is active [2283] Underfull \vbox (badness 10000) has occurred while \output is active [2284] Underfull \vbox (badness 10000) has occurred while \output is active [2285] [2286] [2287]) (./namespacemom__pointaccel.tex [2288] [2289] Underfull \hbox (badness 10000) in paragraph at lines 118--119 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv [2290] [2291] Underfull \vbox (badness 10000) has occurred while \output is active [2292] Underfull \vbox (badness 10000) has occurred while \output is active [2293] Underfull \vbox (badness 10000) has occurred while \output is active [2294] Underfull \hbox (badness 10000) in paragraph at lines 497--498 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv [2295] [2296] Underfull \vbox (badness 10000) has occurred while \output is active [2297] Underfull \vbox (badness 10000) has occurred while \output is active [2298] Underfull \vbox (badness 10000) has occurred while \output is active [2299]) (./namespacemom__pressureforce.tex Underfull \hbox (badness 10000) in paragraph at lines 29--30 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [2300] [2301] [2302]) (./namespacemom__pressureforce__fv.tex [2303] [2304] [2305] Underfull \vbox (badness 10000) has occurred while \output is active [2306] Underfull \vbox (badness 10000) has occurred while \output is active [2307] Underfull \vbox (badness 10000) has occurred while \output is active [2308] Underfull \vbox (badness 10000) has occurred while \output is active [2309] [2310] [2311] [2312] [2313] Underfull \vbox (badness 10000) has occurred while \output is active [2314] Underfull \vbox (badness 10000) has occurred while \output is active [2315] Underfull \vbox (badness 10000) has occurred while \output is active [2316]) (./namespacemom__pressureforce__mont.tex [2317] [2318] [2319] Underfull \vbox (badness 10000) has occurred while \output is active [2320] Underfull \vbox (badness 10000) has occurred while \output is active [2321] [2322] [2323] [2324] [2325] Underfull \vbox (badness 10000) has occurred while \output is active [2326] Underfull \vbox (badness 10000) has occurred while \output is active [2327] Underfull \vbox (badness 10000) has occurred while \output is active [2328] [2329] [2330] [2331] [2332]) (./namespacemom__random.tex [2333] [2334] [2335] [2336] [2337] [2338] Underfull \vbox (badness 10000) has occurred while \output is active [2339] [2340] Underfull \vbox (badness 10000) has occurred while \output is active [2341] [2342] [2343]) (./namespacemom__regridding.tex [2344] [2345] Underfull \hbox (badness 1173) in paragraph at lines 78--79 \T1/phv/m/n/10 _[]scheme, depth[]_[]of[]_[]time[]_[]filter[]_[]shallow, depth[] _[]of[]_[]time[]_[]filter[]_[]deep, compress[]_[]fraction, ref[]_[]pressure, dz []_[] Underfull \hbox (badness 1661) in paragraph at lines 78--79 \T1/phv/m/n/10 min[]_[]surface, nz[]_[]fixed[]_[]surface, Rho[]_[][]M[]L[]_[]av g[]_[]depth, nlay[]_[][]M[]L[]_[]to[]_[]interior, fix[]_[]haloclines, halocline []_[]filt[]_[]len, [2346] [2347] Underfull \hbox (badness 10000) in paragraph at lines 202--203 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [2348] [2349] [2350] Underfull \vbox (badness 10000) has occurred while \output is active [2351] Underfull \hbox (badness 10000) detected at line 425 [][][] [2352] [2353] [2354] Underfull \hbox (badness 10000) in paragraph at lines 627--628 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [2355] Underfull \vbox (badness 10000) has occurred while \output is active [2356] [2357] [2358] [2359] Overfull \hbox (20.61044pt too wide) in paragraph at lines 1007--1008 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed,cs%nk), in tent(inout) \T1/pcr/m/sl/8 h[]_[]new \T1/pcr/m/n/8 ) [private] [2360] Overfull \vbox (26.79585pt too high) has occurred while \output is active [2361] [2362] [2363] Overfull \vbox (35.17787pt too high) has occurred while \output is active [2364] [2365] [2366] [2367] Underfull \vbox (badness 10000) has occurred while \output is active [2368] [2369] [2370] Underfull \hbox (badness 10000) detected at line 1728 [][][] [2371] [2372] [2373] Underfull \hbox (badness 10000) detected at line 1925 [][][] [2374] [2375] [2376] [2377] Underfull \vbox (badness 10000) has occurred while \output is active [2378] Underfull \vbox (badness 10000) has occurred while \output is active [2379] Underfull \vbox (badness 10000) has occurred while \output is active [2380] Underfull \vbox (badness 10000) has occurred while \output is active [2381] Underfull \vbox (badness 10000) has occurred while \output is active [2382] Underfull \vbox (badness 10000) has occurred while \output is active [2383] [2384] Underfull \vbox (badness 10000) has occurred while \output is active [2385] [2386] [2387] [2388] [2389] Underfull \vbox (badness 10000) has occurred while \output is active [2390] [2391] [2392] Underfull \hbox (badness 10000) detected at line 3307 [][][] [2393]) (./namespacemom__regularize__layers.tex [2394] [2395] Underfull \vbox (badness 10000) has occurred while \output is active [2396] [2397] [2398] [2399] [2400] [2401] Underfull \vbox (badness 10000) has occurred while \output is active [2402] Underfull \vbox (badness 10000) has occurred while \output is active [2403] Underfull \vbox (badness 10000) has occurred while \output is active [2404] Underfull \vbox (badness 10000) has occurred while \output is active [2405] Underfull \vbox (badness 10000) has occurred while \output is active [2406]) (./namespacemom__remapping.tex [2407] Underfull \hbox (badness 6893) in paragraph at lines 14--15 []\T1/phv/m/n/10 subroutine, pub-lic [][]remapping[]_[]set[]_[]param[][] (CS, r emapping[]_[]scheme, boundary[]_[]extrapolation, check[]_[] [2408] [2409] [2410] [2411] [2412] [2413] [2414] [2415] [2416] [2417] [2418] [2419] [2420] Underfull \vbox (badness 10000) has occurred while \output is active [2421] Underfull \vbox (badness 10000) has occurred while \output is active [2422] Underfull \vbox (badness 10000) has occurred while \output is active [2423] Underfull \hbox (badness 10000) detected at line 1070 [][][] Underfull \hbox (badness 10000) detected at line 1084 [][][] [2424] [2425] Underfull \vbox (badness 10000) has occurred while \output is active [2426] [2427] [2428] Underfull \vbox (badness 10000) has occurred while \output is active [2429] Underfull \vbox (badness 10000) has occurred while \output is active [2430] Underfull \vbox (badness 10000) has occurred while \output is active [2431] Underfull \vbox (badness 10000) has occurred while \output is active [2432] [2433] [2434] [2435] Overfull \vbox (25.43697pt too high) has occurred while \output is active [2436] [2437] [2438] [2439] [2440] Underfull \vbox (badness 10000) has occurred while \output is active [2441] Underfull \vbox (badness 10000) has occurred while \output is active [2442] Underfull \vbox (badness 10000) has occurred while \output is active [2443] [2444] [2445]) (./namespacemom__restart.tex [2446] [2447] [2448] Underfull \hbox (badness 10000) detected at line 130 [][][] [2449] Underfull \hbox (badness 10000) detected at line 236 [][][] [2450] Underfull \hbox (badness 10000) detected at line 285 [][][] [2451] Underfull \vbox (badness 10000) has occurred while \output is active [2452] [2453] [2454] [2455] [2456] [2457] [2458] Overfull \vbox (1.02933pt too high) has occurred while \output is active [2459] [2460] [2461] [2462] [2463] [2464] [2465] [2466] [2467] [2468] [2469] Underfull \vbox (badness 10000) has occurred while \output is active [2470] [2471] [2472] Underfull \vbox (badness 10000) has occurred while \output is active [2473] [2474] Underfull \hbox (badness 10000) detected at line 1833 [][][] Underfull \vbox (badness 10000) has occurred while \output is active [2475] [2476] Underfull \vbox (badness 10000) has occurred while \output is active [2477] [2478] Underfull \vbox (badness 10000) has occurred while \output is active [2479] [2480] [2481] Underfull \vbox (badness 10000) has occurred while \output is active [2482] Underfull \vbox (badness 10000) has occurred while \output is active [2483]) (./namespacemom__safe__alloc.tex [2484] Overfull \vbox (34.4091pt too high) has occurred while \output is active [2485] [2486] Underfull \vbox (badness 10000) has occurred while \output is active [2487] [2488] [2489]) (./namespacemom__set__diffusivity.tex [2490] [2491] [2492] Underfull \vbox (badness 10000) has occurred while \output is active [2493] Underfull \vbox (badness 10000) has occurred while \output is active [2494] [2495] [2496] Underfull \vbox (badness 10000) has occurred while \output is active [2497] [2498] [2499] Underfull \vbox (badness 10000) has occurred while \output is active [2500] [2501] [2502] [2503] [2504] Underfull \vbox (badness 10000) has occurred while \output is active [2505] [2506] [2507] Underfull \vbox (badness 10000) has occurred while \output is active [2508] [2509] [2510] Underfull \vbox (badness 10000) has occurred while \output is active [2511] [2512] [2513] [2514] [2515] Underfull \vbox (badness 10000) has occurred while \output is active [2516] Underfull \vbox (badness 10000) has occurred while \output is active [2517] Underfull \vbox (badness 10000) has occurred while \output is active [2518] Underfull \vbox (badness 10000) has occurred while \output is active [2519] Underfull \vbox (badness 10000) has occurred while \output is active [2520] Underfull \vbox (badness 10000) has occurred while \output is active [2521] [2522] [2523] Underfull \vbox (badness 10000) has occurred while \output is active [2524] Underfull \vbox (badness 10000) has occurred while \output is active [2525] Underfull \vbox (badness 10000) has occurred while \output is active [2526]) (./namespacemom__set__visc.tex [2527] Underfull \hbox (badness 10000) detected at line 64 [][][] [2528] Underfull \hbox (badness 10000) detected at line 143 [][][] [2529] [2530] Underfull \vbox (badness 10000) has occurred while \output is active [2531] [2532] Underfull \vbox (badness 10000) has occurred while \output is active [2533] Underfull \vbox (badness 10000) has occurred while \output is active [2534] Underfull \vbox (badness 10000) has occurred while \output is active [2535] [2536] [2537] [2538] [2539] Underfull \vbox (badness 10000) has occurred while \output is active [2540] Underfull \vbox (badness 10000) has occurred while \output is active [2541] Underfull \vbox (badness 10000) has occurred while \output is active [2542] Underfull \vbox (badness 10000) has occurred while \output is active [2543] Underfull \vbox (badness 10000) has occurred while \output is active [2544] Underfull \vbox (badness 10000) has occurred while \output is active [2545] Underfull \vbox (badness 10000) has occurred while \output is active [2546] Underfull \vbox (badness 10000) has occurred while \output is active [2547] Underfull \vbox (badness 10000) has occurred while \output is active [2548] Underfull \vbox (badness 10000) has occurred while \output is active [2549] Underfull \vbox (badness 10000) has occurred while \output is active [2550] Overfull \vbox (8.39467pt too high) has occurred while \output is active [2551] [2552] Underfull \vbox (badness 10000) has occurred while \output is active [2553] Underfull \vbox (badness 10000) has occurred while \output is active [2554] Underfull \vbox (badness 10000) has occurred while \output is active [2555] Underfull \vbox (badness 10000) has occurred while \output is active [2556] Underfull \vbox (badness 10000) has occurred while \output is active [2557] Underfull \vbox (badness 10000) has occurred while \output is active [2558] Underfull \vbox (badness 10000) has occurred while \output is active [2559]) (./namespacemom__shared__initialization.tex [2560] Overfull \vbox (29.7233pt too high) has occurred while \output is active [2561] [2562] [2563] Underfull \hbox (badness 10000) detected at line 255 [][][] [2564] [2565] [2566] [2567] Overfull \vbox (22.05618pt too high) has occurred while \output is active [2568] [2569] Underfull \hbox (badness 10000) detected at line 652 [][][] [2570] [2571] [2572] Underfull \vbox (badness 10000) has occurred while \output is active [2573] [2574] [2575] Underfull \vbox (badness 10000) has occurred while \output is active [2576] Underfull \vbox (badness 10000) has occurred while \output is active [2577] [2578] Underfull \vbox (badness 10000) has occurred while \output is active [2579] [2580] [2581] Underfull \vbox (badness 10000) has occurred while \output is active [2582] [2583] Underfull \vbox (badness 10000) has occurred while \output is active [2584]) (./namespacemom__spatial__means.tex [2585] [2586] [2587] Underfull \hbox (badness 10000) detected at line 125 [][][] [2588] [2589] [2590] [2591] [2592] Underfull \hbox (badness 10000) detected at line 520 [][][] [2593] [2594] Underfull \hbox (badness 10000) detected at line 595 [][][] ) (./namespacemom__sponge.tex [2595] [2596] [2597] Underfull \vbox (badness 10000) has occurred while \output is active [2598] Underfull \vbox (badness 10000) has occurred while \output is active [2599] [2600] Overfull \vbox (46.3142pt too high) has occurred while \output is active [2601] [2602] [2603] Overfull \vbox (19.83441pt too high) has occurred while \output is active [2604] [2605]) (./namespacemom__state__initialization.tex [2606] [2607] Underfull \hbox (badness 10000) detected at line 79 [][][] [2608] [2609] [2610] [2611] [2612] [2613] [2614] [2615] [2616] [2617] [2618] Underfull \vbox (badness 10000) has occurred while \output is active [2619] [2620] [2621] Overfull \vbox (6.23174pt too high) has occurred while \output is active [2622] [2623] [2624] Underfull \hbox (badness 10000) detected at line 1251 [][][] [2625] [2626] [2627] [2628] [2629] [2630] [2631] [2632] [2633] [2634] [2635] Underfull \vbox (badness 10000) has occurred while \output is active [2636] Underfull \vbox (badness 10000) has occurred while \output is active [2637] Underfull \vbox (badness 10000) has occurred while \output is active [2638] Underfull \vbox (badness 10000) has occurred while \output is active [2639] Underfull \vbox (badness 10000) has occurred while \output is active [2640] [2641] [2642] [2643] Underfull \vbox (badness 10000) has occurred while \output is active [2644] Underfull \vbox (badness 10000) has occurred while \output is active [2645] Underfull \vbox (badness 10000) has occurred while \output is active [2646] Underfull \vbox (badness 10000) has occurred while \output is active [2647] Underfull \vbox (badness 10000) has occurred while \output is active [2648] [2649] [2650] [2651]) (./namespacemom__string__functions.tex [2652] [2653] [2654] [2655] [2656] Underfull \hbox (badness 10000) detected at line 283 [][][] Underfull \hbox (badness 10000) detected at line 314 [][][] [2657] Underfull \hbox (badness 10000) detected at line 351 [][][] [2658] Underfull \hbox (badness 10000) detected at line 426 [][][] [2659] [2660] [2661] Underfull \hbox (badness 10000) detected at line 601 [][][] [2662] [2663] [2664] Underfull \hbox (badness 10000) detected at line 774 [][][] ) (./namespacemom__sum__output.tex [2665] [2666] [2667] Underfull \vbox (badness 10000) has occurred while \output is active [2668] [2669] Underfull \vbox (badness 10000) has occurred while \output is active [2670] [2671] [2672] Underfull \vbox (badness 10000) has occurred while \output is active [2673] [2674] [2675] [2676] Underfull \vbox (badness 10000) has occurred while \output is active [2677] [2678] [2679] [2680] Underfull \vbox (badness 10000) has occurred while \output is active [2681] Underfull \vbox (badness 10000) has occurred while \output is active [2682] Underfull \vbox (badness 10000) has occurred while \output is active [2683] Underfull \vbox (badness 10000) has occurred while \output is active [2684] Underfull \vbox (badness 10000) has occurred while \output is active [2685] Underfull \vbox (badness 10000) has occurred while \output is active [2686] Underfull \vbox (badness 10000) has occurred while \output is active [2687]) (./namespacemom__surface__forcing.tex [2688] [2689] [2690] [2691] Underfull \vbox (badness 10000) has occurred while \output is active [2692] [2693] [2694] Underfull \vbox (badness 10000) has occurred while \output is active [2695] Underfull \vbox (badness 10000) has occurred while \output is active [2696] [2697] [2698] [2699] [2700] [2701] [2702] [2703] [2704] Underfull \vbox (badness 10000) has occurred while \output is active [2705] [2706] [2707] Underfull \vbox (badness 10000) has occurred while \output is active [2708] Underfull \vbox (badness 10000) has occurred while \output is active [2709] Underfull \vbox (badness 10000) has occurred while \output is active [2710] Underfull \vbox (badness 10000) has occurred while \output is active [2711] Underfull \vbox (badness 10000) has occurred while \output is active [2712] [2713] [2714] [2715] Overfull \vbox (27.8983pt too high) has occurred while \output is active [2716] Overfull \vbox (14.28166pt too high) has occurred while \output is active [2717] [2718] [2719] [2720]) (./namespacemom__tfreeze.tex [2721] [2722] [2723] [2724] [2725]) (./namespacemom__thickness__diffuse.tex [2726] [2727] [2728] [2729] Underfull \vbox (badness 10000) has occurred while \output is active [2730] Underfull \vbox (badness 10000) has occurred while \output is active [2731] Underfull \vbox (badness 10000) has occurred while \output is active [2732] Underfull \vbox (badness 10000) has occurred while \output is active [2733] Underfull \vbox (badness 10000) has occurred while \output is active [2734] [2735] [2736] Underfull \vbox (badness 10000) has occurred while \output is active [2737] Underfull \vbox (badness 10000) has occurred while \output is active [2738] Underfull \vbox (badness 10000) has occurred while \output is active [2739] Underfull \vbox (badness 10000) has occurred while \output is active [2740] Underfull \vbox (badness 10000) has occurred while \output is active [2741] [2742] [2743] Underfull \vbox (badness 10000) has occurred while \output is active [2744] Underfull \vbox (badness 10000) has occurred while \output is active [2745] Underfull \vbox (badness 10000) has occurred while \output is active [2746] Underfull \vbox (badness 10000) has occurred while \output is active [2747] Underfull \vbox (badness 10000) has occurred while \output is active [2748] Underfull \vbox (badness 10000) has occurred while \output is active [2749] Underfull \vbox (badness 10000) has occurred while \output is active [2750] Underfull \vbox (badness 10000) has occurred while \output is active [2751] Underfull \vbox (badness 10000) has occurred while \output is active [2752] Underfull \vbox (badness 10000) has occurred while \output is active [2753] [2754] [2755] [2756] Underfull \vbox (badness 10000) has occurred while \output is active [2757]) (./namespacemom__tidal__forcing.tex [2758] [2759] [2760] [2761] [2762] [2763] Underfull \vbox (badness 10000) has occurred while \output is active [2764] Underfull \vbox (badness 10000) has occurred while \output is active [2765] Underfull \vbox (badness 10000) has occurred while \output is active [2766]) (./namespacemom__tidal__mixing.tex [2767] [2768] [2769] [2770] Underfull \vbox (badness 10000) has occurred while \output is active [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] Underfull \vbox (badness 10000) has occurred while \output is active [2773] Underfull \vbox (badness 10000) has occurred while \output is active [2774] Underfull \vbox (badness 10000) has occurred while \output is active [2775] [2776] Underfull \vbox (badness 10000) has occurred while \output is active [2777] Underfull \vbox (badness 10000) has occurred while \output is active [2778] [2779] [2780] [2781] Overfull \vbox (10.48775pt too high) has occurred while \output is active [2782] [2783] [2784] [2785] Underfull \vbox (badness 10000) has occurred while \output is active [2786] [2787] [2788] Underfull \vbox (badness 10000) has occurred while \output is active [2789] Underfull \vbox (badness 10000) has occurred while \output is active [2790] Underfull \vbox (badness 10000) has occurred while \output is active [2791] Underfull \vbox (badness 10000) has occurred while \output is active [2792] Underfull \vbox (badness 10000) has occurred while \output is active [2793]) (./namespacemom__time__manager.tex Underfull \hbox (badness 10000) detected at line 24 [][][] [2794]) (./namespacemom__tracer__advect.tex [2795] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 h[]_[] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional \T1/pcr/m/sl/8 h[]_[] [2796] [2797] Underfull \vbox (badness 10000) has occurred while \output is active [2798] Underfull \vbox (badness 10000) has occurred while \output is active [2799] Underfull \vbox (badness 10000) has occurred while \output is active [2800] [2801] [2802] Underfull \vbox (badness 10000) has occurred while \output is active [2803] Underfull \vbox (badness 10000) has occurred while \output is active [2804] Underfull \vbox (badness 10000) has occurred while \output is active [2805] [2806] [2807] Underfull \vbox (badness 10000) has occurred while \output is active [2808] Underfull \vbox (badness 10000) has occurred while \output is active [2809] Underfull \vbox (badness 10000) has occurred while \output is active [2810] Underfull \vbox (badness 10000) has occurred while \output is active [2811] [2812] [2813]) (./namespacemom__tracer__diabatic.tex [2814] [2815] Underfull \vbox (badness 10000) has occurred while \output is active [2816] Underfull \vbox (badness 10000) has occurred while \output is active [2817] Underfull \hbox (badness 10000) in paragraph at lines 285--286 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 btm[]_[] Overfull \vbox (1.75337pt too high) has occurred while \output is active [2818] [2819] Underfull \vbox (badness 10000) has occurred while \output is active [2820]) (./namespaceMOM__tracer__flow__control.tex) (./namespacemom__tracer__flow__control.tex [2821] [2822] [2823] Underfull \vbox (badness 10000) has occurred while \output is active [2824] [2825] [2826] [2827] [2828] [2829] [2830] Underfull \vbox (badness 10000) has occurred while \output is active [2831] [2832] [2833] [2834] [2835] [2836]) (./namespacemom__tracer__hor__diff.tex [2837] [2838] [2839] Underfull \vbox (badness 10000) has occurred while \output is active [2840] Underfull \vbox (badness 10000) has occurred while \output is active [2841] Underfull \vbox (badness 10000) has occurred while \output is active [2842] Underfull \vbox (badness 10000) has occurred while \output is active [2843] Underfull \vbox (badness 10000) has occurred while \output is active [2844] Underfull \vbox (badness 10000) has occurred while \output is active [2845] Underfull \vbox (badness 10000) has occurred while \output is active [2846] Underfull \vbox (badness 10000) has occurred while \output is active [2847] Underfull \vbox (badness 10000) has occurred while \output is active [2848] Underfull \vbox (badness 10000) has occurred while \output is active [2849] [2850] [2851] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed), intent (in), optional \T1/pcr/m/sl/8 read[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb), intent (in), optional \T1/pcr/m/sl/8 read[]_[] [2852] [2853] Underfull \vbox (badness 10000) has occurred while \output is active [2854] Underfull \vbox (badness 10000) has occurred while \output is active [2855] Underfull \vbox (badness 10000) has occurred while \output is active [2856] Underfull \vbox (badness 10000) has occurred while \output is active [2857] Underfull \vbox (badness 10000) has occurred while \output is active [2858]) (./namespacemom__tracer__initialization__from__z.tex [2859] Underfull \vbox (badness 10000) has occurred while \output is active [2860] [2861]) (./namespacemom__tracer__registry.tex Underfull \vbox (badness 10000) has occurred while \output is active [2862] [2863] Underfull \vbox (badness 10000) has occurred while \output is active [2864] [2865] [2866] [2867] [2868] [2869] [2870] [2871] Underfull \vbox (badness 10000) has occurred while \output is active [2872] [2873] [2874] Underfull \vbox (badness 10000) has occurred while \output is active [2875] Underfull \vbox (badness 10000) has occurred while \output is active [2876] Underfull \vbox (badness 10000) has occurred while \output is active [2877] [2878] [2879]) (./namespacemom__tracer__z__init.tex [2880] [2881] Underfull \vbox (badness 10000) has occurred while \output is active [2882] Underfull \hbox (badness 10000) detected at line 202 [][][] [2883] [2884] [2885] [2886] [2887] Underfull \hbox (badness 10000) detected at line 505 [][][] [2888] Underfull \vbox (badness 10000) has occurred while \output is active [2889] Underfull \vbox (badness 10000) has occurred while \output is active [2890] [2891] [2892]) (./namespacemom__transcribe__grid.tex [2893] [2894] Underfull \vbox (badness 10000) has occurred while \output is active [2895] [2896] Underfull \vbox (badness 10000) has occurred while \output is active [2897] [2898]) (./namespacemom__transform__fms.tex [2899] [2900]) (./namespacemom__unit__scaling.tex [2901] [2902] [2903]) (./namespacemom__unit__tests.tex [2904]) (./namespacemom__variables.tex [2905] [2906] [2907] [2908] [2909] [2910]) (./namespacemom__vert__friction.tex Underfull \hbox (badness 10000) detected at line 8 [][][] Underfull \hbox (badness 10000) detected at line 11 [][][] [2911] [2912] [2913] Underfull \vbox (badness 10000) has occurred while \output is active [2914] Underfull \vbox (badness 10000) has occurred while \output is active [2915] Underfull \vbox (badness 10000) has occurred while \output is active [2916] [2917] [2918] [2919] Underfull \vbox (badness 10000) has occurred while \output is active [2920] Underfull \vbox (badness 10000) has occurred while \output is active [2921] Underfull \vbox (badness 10000) has occurred while \output is active [2922] [2923] [2924] Underfull \vbox (badness 10000) has occurred while \output is active [2925] Underfull \vbox (badness 10000) has occurred while \output is active [2926] Underfull \vbox (badness 10000) has occurred while \output is active [2927] Underfull \vbox (badness 10000) has occurred while \output is active [2928] Underfull \vbox (badness 10000) has occurred while \output is active [2929] [2930] [2931] Underfull \vbox (badness 10000) has occurred while \output is active [2932] Underfull \vbox (badness 10000) has occurred while \output is active [2933] [2934] [2935] Underfull \vbox (badness 10000) has occurred while \output is active [2936] Underfull \vbox (badness 10000) has occurred while \output is active [2937] Underfull \hbox (badness 10000) in paragraph at lines 1952--1953 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, gv %ke) , intent(inout) \T1/pcr/m/sl/8 visc[]_[] [2938] Underfull \vbox (badness 10000) has occurred while \output is active [2939]) (./namespacemom__verticalgrid.tex [2940] Underfull \hbox (badness 10000) detected at line 66 [][][] Underfull \hbox (badness 10000) detected at line 102 [][][] [2941] Underfull \hbox (badness 10000) detected at line 138 [][][] [2942] [2943] [2944] [2945]) (./namespacemom__wave__interface.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [2946] [2947] [2948] Underfull \vbox (badness 10000) has occurred while \output is active [2949] Underfull \vbox (badness 10000) has occurred while \output is active [2950] [2951] [2952] [2953] [2954] [2955] [2956] [2957] [2958] Underfull \vbox (badness 10000) has occurred while \output is active [2959] Underfull \vbox (badness 10000) has occurred while \output is active [2960] [2961] [2962] [2963] Underfull \vbox (badness 10000) has occurred while \output is active [2964] [2965] Underfull \vbox (badness 10000) has occurred while \output is active [2966] Underfull \vbox (badness 10000) has occurred while \output is active [2967] [2968] [2969] [2970] [2971] [2972] [2973] [2974] [2975] [2976] [2977] [2978] [2979]) (./namespacemom__wave__speed.tex [2980] Underfull \vbox (badness 10000) has occurred while \output is active [2981] [2982] Underfull \hbox (badness 10000) in paragraph at lines 183--184 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [2983] [2984] Underfull \vbox (badness 10000) has occurred while \output is active [2985] Underfull \vbox (badness 10000) has occurred while \output is active [2986] Underfull \vbox (badness 10000) has occurred while \output is active [2987] Underfull \vbox (badness 10000) has occurred while \output is active [2988] Underfull \vbox (badness 10000) has occurred while \output is active [2989] Underfull \vbox (badness 10000) has occurred while \output is active [2990] Overfull \vbox (20.3618pt too high) has occurred while \output is active [2991] [2992] [2993] [2994] Underfull \vbox (badness 10000) has occurred while \output is active [2995] Underfull \vbox (badness 10000) has occurred while \output is active [2996] Underfull \vbox (badness 10000) has occurred while \output is active [2997] Underfull \vbox (badness 10000) has occurred while \output is active [2998] Underfull \vbox (badness 10000) has occurred while \output is active [2999]) (./namespacemom__wave__structure.tex [3000] [3001] Underfull \vbox (badness 10000) has occurred while \output is active [3002] [3003] [3004] Underfull \vbox (badness 10000) has occurred while \output is active [3005] Underfull \vbox (badness 10000) has occurred while \output is active [3006] Underfull \vbox (badness 10000) has occurred while \output is active [3007] Underfull \vbox (badness 10000) has occurred while \output is active [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] [3010]) (./namespacemom__write__cputime.tex [3011] [3012] [3013] [3014]) (./namespaceneverworld__initialization.tex [3015] [3016] [3017] Overfull \vbox (66.35884pt too high) has occurred while \output is active [3018] [3019] Overfull \vbox (59.03142pt too high) has occurred while \output is active [3020] [3021] Overfull \vbox (35.34378pt too high) has occurred while \output is active [3022] [3023] Underfull \vbox (badness 10000) has occurred while \output is active [3024] [3025]) (./namespaceocean__da__core__mod.tex Overfull \vbox (24.63379pt too high) has occurred while \output is active [3026]) (./namespaceocean__da__types__mod.tex [3027]) (./namespaceocean__model__mod.tex [3028] [3029] [3030] [3031] [3032] [3033] [3034] [3035] [3036] [3037] [3038] Underfull \vbox (badness 10000) has occurred while \output is active [3039] [3040] [3041] [3042] [3043] [3044] [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] Underfull \vbox (badness 10000) has occurred while \output is active [3047]) (./namespaceoil__tracer.tex [3048] [3049] [3050] [3051] Underfull \hbox (badness 10000) detected at line 201 [][][] [3052] [3053] Underfull \vbox (badness 10000) has occurred while \output is active [3054] [3055] Overfull \vbox (55.07356pt too high) has occurred while \output is active [3056] [3057]) (./namespacep1m__functions.tex [3058] [3059] [3060] [3061]) (./namespacep3m__functions.tex [3062] Overfull \vbox (44.4672pt too high) has occurred while \output is active [3063] [3064] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] [3065] Underfull \vbox (badness 10000) has occurred while \output is active [3066] [3067] [3068] Underfull \vbox (badness 10000) has occurred while \output is active [3069] [3070] Overfull \vbox (8.10031pt too high) has occurred while \output is active [3071] [3072]) (./namespacePCM__functions.tex) (./namespacepcm__functions.tex [3073]) (./namespacephillips__initialization.tex [3074] [3075] [3076] [3077] [3078] [3079] [3080] Underfull \hbox (badness 10000) detected at line 454 [][][] ) (./namespaceplm__functions.tex [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088]) (./namespacepolynomial__functions.tex [3089] [3090] [3091]) (./namespaceppm__functions.tex [3092] [3093] Underfull \vbox (badness 10000) has occurred while \output is active [3094] [3095] [3096] [3097] Underfull \hbox (badness 10000) detected at line 378 [][][] ) (./namespacepqm__functions.tex [3098] [3099] Underfull \vbox (badness 10000) has occurred while \output is active [3100] [3101] [3102] Underfull \vbox (badness 10000) has occurred while \output is active [3103] Underfull \vbox (badness 10000) has occurred while \output is active [3104] Underfull \vbox (badness 10000) has occurred while \output is active [3105] [3106] Underfull \vbox (badness 10000) has occurred while \output is active [3107] Underfull \vbox (badness 10000) has occurred while \output is active [3108] Underfull \vbox (badness 10000) has occurred while \output is active [3109] [3110]) (./namespacepseudo__salt__tracer.tex [3111] Overfull \vbox (50.21103pt too high) has occurred while \output is active [3112] [3113] Underfull \hbox (badness 10000) detected at line 157 [][][] [3114] [3115] [3116] [3117] [3118]) (./namespaceregional__dyes.tex [3119] Underfull \hbox (badness 10000) detected at line 60 [][][] [3120] [3121] [3122] [3123] [3124] [3125] [3126] Underfull \vbox (badness 10000) has occurred while \output is active [3127]) (./namespaceregrid__consts.tex [3128] Underfull \hbox (badness 10000) detected at line 102 [][][] [3129] Underfull \hbox (badness 10000) detected at line 143 [][][] [3130] Underfull \hbox (badness 10000) detected at line 182 [][][] [3131]) (./namespaceregrid__edge__values.tex [3132] [3133] [3134] [3135] [3136] [3137] Underfull \vbox (badness 10000) has occurred while \output is active [3138] [3139] Underfull \vbox (badness 10000) has occurred while \output is active [3140] Underfull \vbox (badness 10000) has occurred while \output is active [3141] [3142] [3143] [3144] Underfull \vbox (badness 10000) has occurred while \output is active [3145] Underfull \vbox (badness 10000) has occurred while \output is active [3146] [3147] Underfull \vbox (badness 10000) has occurred while \output is active [3148] Underfull \vbox (badness 10000) has occurred while \output is active [3149] [3150] Underfull \vbox (badness 10000) has occurred while \output is active [3151] [3152] Underfull \vbox (badness 10000) has occurred while \output is active [3153] [3154] [3155] [3156] [3157]) (./namespaceregrid__interp.tex [3158] [3159] [3160] [3161] Underfull \hbox (badness 10000) detected at line 197 [][][] [3162] Underfull \vbox (badness 10000) has occurred while \output is active [3163] [3164] [3165] [3166] Underfull \vbox (badness 10000) has occurred while \output is active [3167] Underfull \vbox (badness 10000) has occurred while \output is active [3168] [3169]) (./namespaceregrid__solvers.tex [3170] [3171] [3172] [3173] Underfull \vbox (badness 10000) has occurred while \output is active [3174] [3175]) (./namespacergc__tracer.tex [3176] [3177] Underfull \vbox (badness 10000) has occurred while \output is active [3178] [3179] [3180] [3181]) (./namespacerossby__front__2d__initialization.tex [3182] [3183] Underfull \vbox (badness 10000) has occurred while \output is active [3184] [3185] [3186] [3187] [3188]) (./namespacescm__cvmix__tests.tex [3189] [3190] [3191] [3192] [3193] [3194]) (./namespaceseamount__initialization.tex [3195] [3196] [3197] [3198] Overfull \vbox (27.34378pt too high) has occurred while \output is active [3199]) (./namespaceshelfwave__initialization.tex [3200] [3201] [3202] [3203]) (./namespacesloshing__initialization.tex [3204] [3205] [3206] [3207] [3208]) (./namespacesoliton__initialization.tex [3209] [3210]) (./namespacesupercritical__initialization.tex [3211] Underfull \hbox (badness 3590) in paragraph at lines 8--8 []\T1/phv/m/n/10 The mod-ule con-fig-ures the model for the "su-per-crit-i-cal" ex-per-i-ment. [][]\T1/pcr/m/n/10 https[]://marine.[]rutgers.[] [3212]) (./namespacetidal__bay__initialization.tex [3213] Underfull \vbox (badness 10000) has occurred while \output is active [3214] [3215]) (./namespacetidal__forcing.tex) (./namespaceuser__change__diffusivity.tex [3216] Underfull \hbox (badness 10000) detected at line 42 [][][] [3217] [3218] Underfull \vbox (badness 10000) has occurred while \output is active [3219] [3220] [3221] Underfull \hbox (badness 10000) detected at line 348 [][][] ) (./namespaceuser__initialization.tex [3222] [3223] Overfull \vbox (51.4922pt too high) has occurred while \output is active [3224] [3225] [3226] [3227] [3228] Underfull \vbox (badness 10000) has occurred while \output is active [3229] [3230]) (./namespaceuser__revise__forcing.tex [3231] [3232]) (./namespaceuser__shelf__init.tex [3233] [3234] [3235] [3236] [3237] [3238]) (./namespaceuser__surface__forcing.tex [3239] [3240] Underfull \vbox (badness 10000) has occurred while \output is active [3241] [3242] [3243]) (./namespaceuser__tracer__example.tex [3244] [3245] [3246] [3247] [3248] [3249] [3250] [3251] Underfull \hbox (badness 10000) detected at line 496 [][][] [3252]) (./namespacewrite__ocean__obs__mod.tex [3253] [3254]) [3255] [3256] Chapter 48. (./structmom__variables_1_1accel__diag__ptrs.tex [3257 <./structmom__variables_ 1_1accel__diag__ptrs__coll__graph.pdf>]) (./structcoord__adapt_1_1adapt__cs.tex [3258] [3259 <./structcoord__adapt_1_1adapt__cs__coll__graph.pdf>]) (./structadvection__test__tracer_1_1advection__test__tracer__cs.tex [3260 <./st ructadvection__test__tracer_1_1advection__test__tracer__cs__coll__graph.pdf>]) (./structmom__ale_1_1ale__cs.tex [3261] [3262 <./structmom__ale_1_1ale__cs__col l__graph.pdf>]) (./structmom__ale__sponge_1_1ale__sponge__cs.tex [3263] [3264 <./structmom__ale__sponge_1_1ale__sponge__cs__coll__graph.pdf>] [3265]) (./interfacemom__forcing__type_1_1allocate__forcing__type.tex [3266] [3267] [3268]) (./interfacemom__forcing__type_1_1allocate__mech__forcing.tex [3269] [3270]) (./interfacemom__array__transform_1_1allocate__rotated__array.tex [3271] Overfull \vbox (25.74976pt too high) has occurred while \output is active [3272] [3273] Overfull \vbox (6.44917pt too high) has occurred while \output is active [3274]) (./interfacemom__hor__index_1_1assignment_07_0A_08.tex [3275]) (./interfacemom__coms_1_1assignment_07_0A_08.tex [3276]) (./structmom__tidal__forcing_1_1astro__longitudes.tex [3277]) (./structmom__diag__mediator_1_1axes__grp.tex [3278 <./structmom__tidal__forcin g_1_1astro__longitudes__coll__graph.pdf>] [3279 <./structmom__diag__mediator_1_ 1axes__grp__coll__graph.pdf>] [3280]) (./structmom__barotropic_1_1barotropic__cs.tex Underfull \vbox (badness 10000) has occurred while \output is active [3281] [3282 <./structmom__barotropic_1_1barotropic__cs__coll__graph.pdf>] [3283] [3284] [3285] [3286] [3287] [3288]) (./interfacemom__checksums_1_1bchksum.tex [3289] [3290] Underfull \vbox (badness 10000) has occurred while \output is active [3291] [3292] [3293] Underfull \vbox (badness 10000) has occurred while \output is active [3294]) (./interfacemom__checksums_1_1bchksum__pair.tex [3295] [3296] [3297]) (./structbfb__surface__forcing_1_1bfb__surface__forcing__cs.tex [3298] [3299 <. /structbfb__surface__forcing_1_1bfb__surface__forcing__cs__coll__graph.pdf>]) (./structmom__bkgnd__mixing_1_1bkgnd__mixing__cs.tex [3300 <./structmom__bkgnd_ _mixing_1_1bkgnd__mixing__cs__coll__graph.pdf>] [3301]) (./structboundary__impulse__tracer_1_1boundary__impulse__tracer__cs.tex [3302] [3303 <./structboundary__impulse__tracer_1_1boundary__impulse__tracer__c s__coll__graph.pdf>]) (./structmom__variables_1_1bt__cont__type.tex [3304] [3305 <./structmom__variables_1_1bt__cont__type__coll__graph.pdf>]) (./structmom__barotropic_1_1bt__obc__type.tex [3306] [3307 <./structmom__barotr opic_1_1bt__obc__type__coll__graph.pdf>]) (./structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs.tex [3308] [3309 <./stru ctmom__bulk__mixed__layer_1_1bulkmixedlayer__cs__coll__graph.pdf>] [3310] [3311]) (./interfacemom__eos_1_1calculate__compress.tex [3312] Underfull \vbox (badness 10000) has occurred while \output is active [3313] [3314]) (./interfacemom__eos_1_1calculate__density.tex [3315] Overfull \vbox (80.42377pt too high) has occurred while \output is active [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324]) (./interfacemom__eos_1_1calculate__density__derivs.tex [3325] [3326] [3327] Overfull \vbox (39.68802pt too high) has occurred while \output is active [3328]) (./interfacemom__eos__linear_1_1calculate__density__derivs__linear.tex [3329] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]linear [3330] Underfull \hbox (badness 10000) in paragraph at lines 94--95 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]linear [3331]) (./interfacemom__eos__nemo_1_1calculate__density__derivs__nemo.tex [3332] [3333]) (./interfacemom__eos__teos10_1_1calculate__density__derivs__teos10.tex [3334] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]teos10 [3335] Underfull \hbox (badness 10000) in paragraph at lines 92--93 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]teos10 [3336]) (./interfacemom__eos__wright_1_1calculate__density__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]wright [3337] [3338] Underfull \hbox (badness 10000) in paragraph at lines 95--96 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]wright [3339]) (./interfacemom__eos__linear_1_1calculate__density__linear.tex [3340] [3341]) (./interfacemom__eos__nemo_1_1calculate__density__nemo.tex [3342] [3343] Overfull \vbox (10.06525pt too high) has occurred while \output is active [3344]) (./interfacemom__eos_1_1calculate__density__second__derivs.tex [3345] [3346] [3347] [3348]) (./interfacemom__eos__linear_1_1calculate__density__second__derivs__linear.tex [3349] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] [3350] Underfull \hbox (badness 10000) in paragraph at lines 96--97 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] [3351]) (./interfacemom__eos__teos10_1_1calculate__density__second__derivs__teos10.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [3352] [3353] Underfull \hbox (badness 10000) in paragraph at lines 101--102 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [3354]) (./interfacemom__eos__wright_1_1calculate__density__second__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [3355] [3356] Underfull \hbox (badness 10000) in paragraph at lines 120--121 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [3357]) (./interfacemom__eos__teos10_1_1calculate__density__teos10.tex [3358] [3359]) (./interfacemom__eos__unesco_1_1calculate__density__unesco.tex [3360] [3361] Overfull \vbox (42.16423pt too high) has occurred while \output is active [3362]) (./interfacemom__eos__wright_1_1calculate__density__wright.tex [3363] [3364]) (./interfacemom__eos_1_1calculate__spec__vol.tex [3365] [3366] [3367] [3368] [3369]) (./interfacemom__eos__linear_1_1calculate__spec__vol__linear.tex [3370] [3371]) (./interfacemom__eos__teos10_1_1calculate__spec__vol__teos10.tex [3372] [3373] [3374]) (./interfacemom__eos__unesco_1_1calculate__spec__vol__unesco.tex [3375] [3376] Underfull \vbox (badness 10000) has occurred while \output is active [3377]) (./interfacemom__eos__wright_1_1calculate__spec__vol__wright.tex [3378] [3379]) (./interfacemom__eos_1_1calculate__specific__vol__derivs.tex [3380] Underfull \vbox (badness 10000) has occurred while \output is active [3381] [3382]) (./interfacemom__eos_1_1calculate__tfreeze.tex [3383] Overfull \vbox (50.59338pt too high) has occurred while \output is active [3384] Overfull \vbox (45.06868pt too high) has occurred while \output is active [3385]) (./interfacemom__tfreeze_1_1calculate__tfreeze__linear.tex [3386] [3387]) (./interfacemom__tfreeze_1_1calculate__tfreeze__millero.tex [3388] [3389] [3390]) (./interfacemom__tfreeze_1_1calculate__tfreeze__teos10.tex [3391] [3392]) (./interfacemom__debugging_1_1check__redundant.tex [3393] [3394] [3395] [3396]) (./interfacemom__debugging_1_1check__redundant__b.tex [3397] [3398] [3399] [3400] [3401]) (./interfacemom__debugging_1_1check__redundant__c.tex [3402] Overfull \vbox (103.58171pt too high) has occurred while \output is active [3403] [3404]) (./interfacemom__debugging_1_1check__redundant__t.tex [3405] [3406] [3407] [3408] [3409] [3410]) (./interfacemom__checksums_1_1chk__sum__msg.tex [3411] [3412] [3413]) (./interfacemom__checksums_1_1chksum.tex [3414] [3415] [3416]) (./interfacemom__domains_1_1clone__mom__domain.tex [3417] [3418] [3419] [3420] Underfull \vbox (badness 10000) has occurred while \output is active [3421]) (./structmom__variables_1_1cont__diag__ptrs.tex Underfull \vbox (badness 1902) has occurred while \output is active [3422]) (./structmom__continuity_1_1continuity__cs.tex [3423 <./structmom__variables_1_ 1cont__diag__ptrs__coll__graph.pdf>] [3424 <./structmom__continuity_1_1continui ty__cs__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1continuity__ppm__cs.tex [3425 <./structmom__co ntinuity__ppm_1_1continuity__ppm__cs__coll__graph.pdf>]) (./interfaceregrid__consts_1_1coordinateunits.tex [3426] Underfull \hbox (badness 10000) detected at line 37 [][][] [3427] Underfull \hbox (badness 10000) detected at line 76 [][][] ) (./structmom__coriolisadv_1_1coriolisadv__cs.tex [3428] [3429 <./structmom__c oriolisadv_1_1coriolisadv__cs__coll__graph.pdf>] [3430]) (./interfacemom__domains_1_1create__group__pass.tex [3431] [3432] [3433] [3434] [3435] [3436] [3437]) (./structmom__controlled__forcing_1_1ctrl__forcing__cs.tex [3438 <./structmom__ controlled__forcing_1_1ctrl__forcing__cs__coll__graph.pdf>] [3439] [3440] [3441]) (./structmom__cvmix__conv_1_1cvmix__conv__cs.tex [3442 <./structmom__cv mix__conv_1_1cvmix__conv__cs__coll__graph.pdf>]) (./structmom__cvmix__ddiff_1_1cvmix__ddiff__cs.tex [3443] [3444 <./structmom__c vmix__ddiff_1_1cvmix__ddiff__cs__coll__graph.pdf>]) (./structmom__cvmix__shear_1_1cvmix__shear__cs.tex [3445 <./structmom__cvmix__s hear_1_1cvmix__shear__cs__coll__graph.pdf>]) (./structmom__sum__output_1_1depth__list.tex [3446] [3447 <./structmom__sum__ou tput_1_1depth__list__coll__graph.pdf>]) (./structmom__diabatic__aux_1_1diabatic__aux__cs.tex [3448 <./structmom__diabat ic__aux_1_1diabatic__aux__cs__coll__graph.pdf>]) (./structmom__diabatic__driver_1_1diabatic__cs.tex [3449] Underfull \vbox (badness 10000) has occurred while \output is active [3450] [3451 <./structmom__diabatic__driver_1_1diabatic__cs__coll__graph.pdf>] [3452] [3453] [3454] [3455] [3456]) (./structmom__diag__mediator_1_1diag__ctrl.tex [3457] [3458 <./structmom__diag_ _mediator_1_1diag__ctrl__coll__graph.pdf>] [3459] [3460] [3461]) (./structmom__diag__mediator_1_1diag__dsamp.tex) (./structmom__diag__mediator_1_1diag__grid__storage.tex [3462 <./structmom__dia g__mediator_1_1diag__dsamp__coll__graph.pdf>] [3463 <./structmom__diag__mediato r_1_1diag__grid__storage__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__grids__type.tex) (./structmom__diag__remap_1_1diag__remap__ctrl.tex [3464 <./structmom__diag__me diator_1_1diag__grids__type__coll__graph.pdf>] [3465 <./structmom__diag__remap_ 1_1diag__remap__ctrl__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__type.tex [3466] [3467 <./structmom__diag_ _mediator_1_1diag__type__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diagcs__dsamp.tex [3468] [3469 <./structmom__di ag__mediator_1_1diagcs__dsamp__coll__graph.pdf>] [3470]) (./structmom__diagnostics_1_1diagnostics__cs.tex [3471] [3472 <./structmom__dia gnostics_1_1diagnostics__cs__coll__graph.pdf>] [3473] [3474] [3475]) (./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs.tex [3476] [3477 <./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs__coll__graph .pdf>]) (./structmom__set__diffusivity_1_1diffusivity__diags.tex [3478] [3479 <./structmom__set__diffusivity_1_1diffusivity__diags__coll__graph.pdf>]) (./structmom__get__input_1_1directories.tex [3480 <./structmom__get__input_1_1d irectories__coll__graph.pdf>]) (./interfacemom__document_1_1doc__param.tex [3481] [3482] Underfull \vbox (badness 10000) has occurred while \output is active [3483] [3484] [3485] [3486] [3487] [3488] [3489] [3490] [3491]) (./structmom__document_1_1doc__type.tex [3492 <./structmom__document_1_1doc__ty pe__coll__graph.pdf>]) (./structdome__tracer_1_1dome__tracer__cs.tex [3493] [3494 <./structdome__tracer_1_1dome__tracer__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1downsample__diag__field.tex [3495] [3496] [3497]) (./interfacemom__diag__mediator_1_1downsample__field.tex [3498] Underfull \vbox (badness 10000) has occurred while \output is active [3499] [3500] [3501]pdfTeX warning (ext4): destination with the same identifier (name{ namespacemom__diag__mediator_downsampling}) has been already used, duplicate ig nored \relax l.229 ...espacemom__diag__mediator_downsampling}{} \subsection{The down sampl... [3502] Overfull \hbox (36.1684pt too wide) in paragraph at lines 318--318 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [3503] Underfull \vbox (badness 10000) has occurred while \output is active [3504]) (./interfacemom__diag__mediator_1_1downsample__mask.tex [3505] [3506] [3507]) (./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs.tex Underfull \vbox (badness 3590) has occurred while \output is active [3508] [3509 <./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs__co ll__graph.pdf>]) (./structregional__dyes_1_1dye__tracer__cs.tex [3510 <./struct regional__dyes_1_1dye__tracer__cs__coll__graph.pdf>]) (./structdyed__channel__initialization_1_1dyed__channel__obc__cs.tex [3511]) (./structdyed__obc__tracer_1_1dyed__obc__tracer__cs.tex [3512 <./structdyed__ch annel__initialization_1_1dyed__channel__obc__cs__coll__graph.pdf>] [3513 <./str uctdyed__obc__tracer_1_1dyed__obc__tracer__cs__coll__graph.pdf>]) (./structmom__dyn__horgrid_1_1dyn__horgrid__type.tex [3514 <./structmom__dyn__h orgrid_1_1dyn__horgrid__type__coll__graph.pdf>] [3515] [3516] [3517] [3518]) (./interfacemom__coms_1_1efp__sum__across__pes.tex [3519] [3520] [3521]) (./structmom__coms_1_1efp__type.tex) (./structmom__energetic__pbl_1_1energetic__pbl__cs.tex [3522 <./structmom__coms _1_1efp__type__coll__graph.pdf>] [3523 <./structmom__energetic__pbl_1_1energeti c__pbl__cs__coll__graph.pdf>] [3524] [3525] [3526]) (./structmom__entrain__diffusive_1_1entrain__diffusive__cs.tex [3527 <./structm om__entrain__diffusive_1_1entrain__diffusive__cs__coll__graph.pdf>]) (./structmom__eos_1_1eos__type.tex [3528] [3529 <./structmom__eos_1_1eos__type_ _coll__graph.pdf>]) (./structmom__energetic__pbl_1_1epbl__column__diags.tex [3530 <./structmom__energetic__pbl_1_1epbl__column__diags__coll__graph.pdf>]) (./structmom__restart_1_1field__restart.tex [3531]) (./structmom__file__parser_1_1file__data__type.tex [3532 <./structmom__restart_ 1_1field__restart__coll__graph.pdf>]) (./interfacemom__io_1_1file__exists.tex [3533 <./structmom__file__parser_1_1file__data__type__coll__graph.pdf>] [3534]) (./structmom__open__boundary_1_1file__obc__cs.tex [3535]) (./interfacemom__horizontal__regridding_1_1fill__boundaries.tex [3536 <./struct mom__open__boundary_1_1file__obc__cs__coll__graph.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 71--72 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [3537]) (./interfacemom__domains_1_1fill__symmetric__edges.tex [3538] [3539] Underfull \vbox (badness 10000) has occurred while \output is active [3540]) (./interfacemom__interface__heights_1_1find__eta.tex [3541] [3542] [3543] [3544]) (./structmom__forcing__type_1_1forcing.tex [3545] [3546 <./structmom__f orcing__type_1_1forcing__coll__graph.pdf>] [3547] [3548]) (./structmom__forcing__type_1_1forcing__diags.tex [3549] [3550 <./structmom__fo rcing__type_1_1forcing__diags__coll__graph.pdf>] [3551] [3552] [3553] [3554]) (./structocean__da__types__mod_1_1forward__operator__type.tex [3555]) (./structg__tracer__utils_1_1g__diag__type.tex [3556 <./structocean__da__types_ _mod_1_1forward__operator__type__coll__graph.pdf>]) (./structg__tracer__utils_1_1g__tracer__common.tex [3557 <./structg__tracer__ut ils_1_1g__diag__type__coll__graph.pdf>] [3558 <./structg__tracer__utils_1_1g__t racer__common__coll__graph.pdf>]) (./interfaceg__tracer__utils_1_1g__tracer__get__pointer.tex [3559] [3560] [3561]) (./interfaceg__tracer__utils_1_1g__tracer__get__values.tex [3562] [3563] Overfull \vbox (58.06468pt too high) has occurred while \output is active [3564] [3565]) (./interfaceg__tracer__utils_1_1g__tracer__set__values.tex [3566] [3567] [3568]) (./structg__tracer__utils_1_1g__tracer__type.tex [3569 <. /structg__tracer__utils_1_1g__tracer__type__coll__graph.pdf>]) (./structmom__geothermal_1_1geothermal__cs.tex [3570]) (./interfacemom__file__parser_1_1get__param.tex [3571 <./structmom__geothermal_ 1_1geothermal__cs__coll__graph.pdf>] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584]) (./structmom__grid__initialize_1_1gps.tex [3585 <./structmom__grid__initialize_ 1_1gps__coll__graph.pdf>]) (./structocean__da__types__mod_1_1grid__type.tex [3586] [3587 <./structocean__da__types__mod_1_1grid__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1hchksum.tex [3588] [3589] Underfull \vbox (badness 10000) has occurred while \output is active [3590] [3591] Underfull \vbox (badness 10000) has occurred while \output is active [3592]) (./interfacemom__checksums_1_1hchksum__pair.tex [3593] [3594] [3595]) (./structmom__hor__index_1_1hor__index__type.tex [3596] [3597 <./structmom__hor __index_1_1hor__index__type__coll__graph.pdf>] [3598]) (./structmom__hor__visc_1_1hor__visc__cs.tex [3599 <./structmom__hor__visc_1_1h or__visc__cs__coll__graph.pdf>] [3600] [3601] [3602] [3603]) (./interfacemom__horizontal__regridding_1_1horiz__interp__and__extrap__tracer.t ex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [3604] [3605] Underfull \vbox (badness 10000) has occurred while \output is active [3606] Underfull \vbox (badness 10000) has occurred while \output is active [3607] Underfull \vbox (badness 10000) has occurred while \output is active [3608] Underfull \hbox (badness 10000) in paragraph at lines 371--372 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [3609] [3610] Underfull \vbox (badness 10000) has occurred while \output is active [3611] Underfull \vbox (badness 10000) has occurred while \output is active [3612] Underfull \vbox (badness 10000) has occurred while \output is active [3613] Underfull \vbox (badness 10000) has occurred while \output is active [3614]) (./structcoord__hycom_1_1hycom__cs.tex [3615 <./structcoord__hycom_1_1hycom__cs __coll__graph.pdf>]) (./structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type.tex [3616 <. /structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type__coll__graph.p df>] [3617]) (./structmom__ice__shelf_1_1ice__shelf__cs.tex Underfull \vbox (badness 1028) has occurred while \output is active [3618] [3619 <./structmom__ice__shelf_1_1ice__shelf__cs__coll__graph.pdf>] [3620] [3621] [3622]) (./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs.tex [3623] [3624 <./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs__coll__g raph.pdf>] [3625] [3626]) (./structmom__ice__shelf__state_1_1ice__shelf__state.tex [3627] [3628 <./struct mom__ice__shelf__state_1_1ice__shelf__state__coll__graph.pdf>]) (./structideal__age__example_1_1ideal__age__tracer__cs.tex [3629 <./structideal __age__example_1_1ideal__age__tracer__cs__coll__graph.pdf>]) (./structidealized__hurricane_1_1idealized__hurricane__cs.tex [3630] [3631 <./s tructidealized__hurricane_1_1idealized__hurricane__cs__coll__graph.pdf>]) (./interfacemom__ale__sponge_1_1initialize__ale__sponge.tex [3632] [3633] [3634] Underfull \vbox (badness 10000) has occurred while \output is active [3635] [3636] [3637] Underfull \vbox (badness 10000) has occurred while \output is active [3638]) (./structmom__internal__tides_1_1int__tide__cs.tex Underfull \vbox (badness 10000) has occurred while \output is active [3639] [3640 <./structmom__internal__tides_1_1int__tide__cs__coll__graph.pdf>] [3641] [3642]) (./structmom__int__tide__input_1_1int__tide__input__cs.tex [3643] [3644 <./structmom__int__tide__input_1_1int__tide__input__cs__coll__grap h.pdf>]) (./structmom__int__tide__input_1_1int__tide__input__type.tex [3645 <./ structmom__int__tide__input_1_1int__tide__input__type__coll__graph.pdf>]) (./structregrid__interp_1_1interp__cs__type.tex [3646 <./structregrid__interp_1 _1interp__cs__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1is__nan.tex [3647] [3648] [3649]) (./structisomip__tracer_1_1isomip__tracer__cs.tex Underfull \vbox (badness 1688) has occurred while \output is active [3650] [3651 <./structisomip__tracer_1_1isomip__tracer__cs__coll__graph.pdf>]) (./structmom__kappa__shear_1_1kappa__shear__cs.tex [3652 <./structmom__kappa__s hear_1_1kappa__shear__cs__coll__graph.pdf>] [3653]) (./structkdtree_1_1kd__root.tex [3654]) (./structkelvin__initialization_1_1kelvin__obc__cs.tex [3655 <./structkdtree_1_ 1kd__root__coll__graph.pdf>]) (./structmom__cvmix__kpp_1_1kpp__cs.tex [3656 <./ structkelvin__initialization_1_1kelvin__obc__cs__coll__graph.pdf>] [3657 <./str uctmom__cvmix__kpp_1_1kpp__cs__coll__graph.pdf>] [3658] [3659] [3660] [3661]) (./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diffusion__cs. tex [3662 <./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diff usion__cs__coll__graph.pdf>] [3663]) (./structmom__document_1_1link__msg.tex [3664 <./structmom__document_1_1link__msg__coll__graph.pdf>]) (./structmom__file__parser_1_1link__parameter.tex [3665 <./structmom__file__par ser_1_1link__parameter__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__u__type.tex [3666 <./structmom__ba rotropic_1_1local__bt__cont__u__type__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__v__type.tex [3667] [3668 <./struct mom__barotropic_1_1local__bt__cont__v__type__coll__graph.pdf>]) (./interfacemom__file__parser_1_1log__param.tex Underfull \hbox (badness 2065) in paragraph at lines 23--24 []\T1/phv/m/n/10 subroutine [][]log[]_[]param[]_[]int[]_[]array[][] (CS, mod-u- le-name, var-name, value, desc, units, de-fault, layout[]Param, [3669] [3670] [3671] [3672] [3673] [3674] [3675] Underfull \vbox (badness 10000) has occurred while \output is active [3676] [3677] [3678]) (./interfacemom__file__parser_1_1log__version.tex [3679] [3680]) (./structmom__ice__shelf__dynamics_1_1loop__bounds__type.tex [3681]) (./structmom__internal__tides_1_1loop__bounds__type.tex [3682 <./structmom__ice __shelf__dynamics_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1loop__bounds__type.tex [3683 <./structmom__int ernal__tides_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__marine__ice_1_1marine__ice__cs.tex [3684 <./structmom__continuity __ppm_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__forcing__type_1_1mech__forcing.tex [3685 <./structmom__marine__ic e_1_1marine__ice__cs__coll__graph.pdf>] [3686 <./structmom__forcing__type_1_1me ch__forcing__coll__graph.pdf>] [3687]) (./structmom__meke_1_1meke__cs.tex [3688 <./structmom__meke_1_1meke__cs__coll__graph.pdf>] [3689] [3690]) (./structmom__meke__types_1_1meke__type.tex [3691] [3692 <./structmom__meke__ty pes_1_1meke__type__coll__graph.pdf>]) (./structmom__barotropic_1_1memory__size__type.tex [3693]) (./structmeso__surface__forcing_1_1meso__surface__forcing__cs.tex [3694 <./stru ctmom__barotropic_1_1memory__size__type__coll__graph.pdf>] [3695 <./structmeso_ _surface__forcing_1_1meso__surface__forcing__cs__coll__graph.pdf>]) (./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs.tex [3696] [3697 <./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs__coll__gra ph.pdf>]) (./structmom_1_1mom__control__struct.tex [3698] Underfull \vbox (badness 10000) has occurred while \output is active [3699] [3700 <./structmom_1_1mom__control__struct__coll__graph.pdf>] [3701] [3702] [3703] [3704]) (./structmom_1_1mom__diag__ids.tex [3705]) (./structmom__domains_1_1mom__domain__type.tex [3706 <./structmom_1_1mom__diag_ _ids__coll__graph.pdf>] [3707 <./structmom__domains_1_1mom__domain__type__coll_ _graph.pdf>]) (./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs.tex [3708] [3709 <./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs__coll__gra ph.pdf>] [3710] [3711] [3712]) (./structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs.tex [3713] [3714 <./st ructmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs__coll__graph.pdf>] [3715]) (./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs.tex [3716] [3717 <./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs__coll_ _graph.pdf>] [3718]) (./structmom__generic__tracer_1_1mom__generic__tracer__cs.tex [3719]) (./interfacemom__io_1_1mom__read__data.tex [3720 <./structmom__generic__tracer_ 1_1mom__generic__tracer__cs__coll__graph.pdf>] [3721] [3722] [3723] [3724]) (./interfacemom__io_1_1mom__read__vector.tex [3725] [3726] [3727]) (./structmom__restart_1_1mom__restart__cs.tex Underfull \vbox (badness 2495) has occurred while \output is active [3728] [3729 <./structmom__restart_1_1mom__restart__cs__coll__graph.pdf>]) (./interfacemom__checksum__packages_1_1mom__state__chksum.tex [3730] [3731] Underfull \vbox (badness 10000) has occurred while \output is active [3732]) (./structmom__neutral__diffusion_1_1neutral__diffusion__cs.tex [3733] [3734 <./ structmom__neutral__diffusion_1_1neutral__diffusion__cs__coll__graph.pdf>] [3735] [3736]) (./structmom__open__boundary_1_1obc__registry__type.tex [3737 <. /structmom__open__boundary_1_1obc__registry__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__data__type.tex [3738 <./structmom __open__boundary_1_1obc__segment__data__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__tracer__type.tex [3739 <./structm om__open__boundary_1_1obc__segment__tracer__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__type.tex [3740] [3741 <./structmo m__open__boundary_1_1obc__segment__type__coll__graph.pdf>] [3742] [3743]) (./structmom__open__boundary_1_1obc__struct__type.tex [3744]) (./structmom__restart_1_1obsolete__restart.tex [3745 <./structmom__open__bounda ry_1_1obc__struct__type__coll__graph.pdf>]) (./structocean__da__types__mod_1_1ocean__control__struct.tex [3746 <./structmom __restart_1_1obsolete__restart__coll__graph.pdf>] [3747 <./structocean__da__typ es__mod_1_1ocean__control__struct__coll__graph.pdf>]) (./structmom__grid_1_1ocean__grid__type.tex [3748 <./structmom__grid_1_1ocean__ grid__type__coll__graph.pdf>] [3749] [3750] [3751] [3752]) (./structmom__variables_1_1ocean__internal__state.tex [3753] [3754 <./structmom __variables_1_1ocean__internal__state__coll__graph.pdf>]) (./interfaceocean__model__mod_1_1ocean__model__data__get.tex [3755] [3756] [3757]) (./structmom__open__boundary_1_1ocean__obc__type.tex Underfull \vbox (badness 3590) has occurred while \output is active [3758] [3759 <./structmom__open__boundary_1_1ocean__obc__type__coll__graph.pdf>] [3760] [3761]) (./structocean__da__types__mod_1_1ocean__profile__type.tex [3762] [3763 <./structocean__da__types__mod_1_1ocean__profile__type__coll__grap h.pdf>] [3764]) (./structocean__model__mod_1_1ocean__public__type.tex [3765 <./ structocean__model__mod_1_1ocean__public__type__coll__graph.pdf>]) (./structocean__model__mod_1_1ocean__state__type.tex [3766] Underfull \vbox (badness 10000) has occurred while \output is active [3767] [3768 <./structocean__model__mod_1_1ocean__state__type__coll__graph.pdf>] [3769]) (./structmom__ocmip2__cfc_1_1ocmip2__cfc__cs.tex [3770] [3771 <./struct mom__ocmip2__cfc_1_1ocmip2__cfc__cs__coll__graph.pdf>] [3772]) (./structmom__oda__driver__mod_1_1oda__cs.tex [3773] [3774 <./structmom__oda__d river__mod_1_1oda__cs__coll__graph.pdf>] [3775]) (./structmom__offline__main_1_1offline__transport__cs.tex [3776] [3777 <./struc tmom__offline__main_1_1offline__transport__cs__coll__graph.pdf>] [3778] [3779] [3780] [3781]) (./structoil__tracer_1_1oil__tracer__cs.tex [3782] [3783 <./structoil__tracer_1_1oil__tracer__cs__coll__graph.pdf>] [3784]) (./structmom__opacity_1_1opacity__cs.tex [3785 <./structmom__opacity_1_1opacity __cs__coll__graph.pdf>]) (./interfacemom__coms_1_1operator_07_09_08.tex [3786] Underfull \hbox (badness 10000) detected at line 35 [][][] ) (./interfacemom__coms_1_1operator_07-_08.tex [3787] Underfull \hbox (badness 10000) detected at line 35 [][][] ) (./structmom__opacity_1_1optics__type.tex [3788] [3789 <./structmom__opacity_ 1_1optics__type__coll__graph.pdf>]) (./structmom__restart_1_1p0d.tex) (./structmom__restart_1_1p1d.tex [3790 <./structmom__restart_1_1p0d__coll__grap h.pdf>]) (./structmom__ale__sponge_1_1p2d.tex [3791 <./structmom__restart_1_1p1 d__coll__graph.pdf>]) (./structmom__restart_1_1p2d.tex [3792 <./structmom__ale_ _sponge_1_1p2d__coll__graph.pdf>]) (./structmom__variables_1_1p2d.tex [3793 <./ structmom__restart_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_1p2d.tex [3794 <./structmom__variables_1_1p2d__coll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2d.tex [3795 <./structmom__sponge_1_1p2d__c oll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2di.tex [3796 <./structmo m__tracer__hor__diff_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_1p3d.tex [3797 <./structmom__tracer__hor__diff_1_1p2di__coll__graph.pdf>]) (./structmom__restart_1_1p3d.tex [3798 <./structmom__sponge_1_1p3d__coll__graph .pdf>]) (./structmom__ale__sponge_1_1p3d.tex [3799 <./structmom__restart_1_1p3d __coll__graph.pdf>]) (./structmom__variables_1_1p3d.tex [3800 <./structmom__ale __sponge_1_1p3d__coll__graph.pdf>]) (./structmom__restart_1_1p4d.tex [3801 <./s tructmom__variables_1_1p3d__coll__graph.pdf>]) (./structmom__file__parser_1_1param__file__type.tex [3802 <./structmom__restart _1_1p4d__coll__graph.pdf>] [3803 <./structmom__file__parser_1_1param__file__typ e__coll__graph.pdf>]) (./structmom__file__parser_1_1parameter__block.tex [3804]) (./interfacemom__domains_1_1pass__var.tex [3805 <./structmom__file__par ser_1_1parameter__block__coll__graph.pdf>] [3806] Underfull \vbox (badness 10000) has occurred while \output is active [3807] Overfull \vbox (17.1185pt too high) has occurred while \output is active [3808]) (./interfacemom__domains_1_1pass__var__complete.tex [3809] [3810] Overfull \vbox (9.01045pt too high) has occurred while \output is active [3811]) (./interfacemom__domains_1_1pass__var__start.tex [3812] Underfull \hbox (badness 10000) detected at line 54 [][][] [3813] [3814] Underfull \hbox (badness 10000) detected at line 131 [][][] ) (./interfacemom__domains_1_1pass__vector.tex [3815] [3816] [3817] [3818]) (./interfacemom__domains_1_1pass__vector__complete.tex [3819] [3820] [3821] [3822]) (./interfacemom__domains_1_1pass__vector__start.tex [3823] Underfull \hbox (badness 10000) detected at line 56 [][][] [3824] [3825] Underfull \hbox (badness 10000) detected at line 146 [][][] [3826]) (./structmom__pointaccel_1_1pointaccel__cs.tex [3827 <./structmom__poin taccel_1_1pointaccel__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1post__data.tex [3828] Overfull \vbox (38.17288pt too high) has occurred while \output is active [3829] [3830] [3831] Overfull \vbox (26.4347pt too high) has occurred while \output is active [3832] [3833]) (./structmom__pressureforce_1_1pressureforce__cs.tex [3834]) (./structmom__pressureforce__fv_1_1pressureforce__fv__cs.tex [3835 <./structmom __pressureforce_1_1pressureforce__cs__coll__graph.pdf>] [3836 <./structmom__pre ssureforce__fv_1_1pressureforce__fv__cs__coll__graph.pdf>]) (./structmom__pressureforce__mont_1_1pressureforce__mont__cs.tex [3837 <./struc tmom__pressureforce__mont_1_1pressureforce__mont__cs__coll__graph.pdf>]) (./structmom__random_1_1prng.tex [3838 <./structmom__random_1_1prng__coll__grap h.pdf>]) (./structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs.tex [3839 <. /structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs__coll__graph.pdf>]) (./structmom__oda__driver__mod_1_1ptr__mpp__domain.tex [3840]) (./interfacemom__checksums_1_1qchksum.tex [3841 <./structmom__oda__driver__mod_ 1_1ptr__mpp__domain__coll__graph.pdf>] [3842] Underfull \vbox (badness 10000) has occurred while \output is active [3843] [3844] [3845] Underfull \vbox (badness 10000) has occurred while \output is active [3846]) (./interfacemom__restart_1_1query__initialized.tex [3847] [3848] [3849] [3850] [3851] [3852] [3853] [3854] Overfull \vbox (1.00325pt too high) has occurred while \output is active [3855] [3856]) (./interfacemom__file__parser_1_1read__param.tex [3857] [3858] [3859] [3860] Overfull \vbox (16.03447pt too high) has occurred while \output is active [3861] [3862] [3863] [3864]) (./interfacemom__diag__manager__wrapper_1_1register__diag__field__fms.tex [3865] Underfull \hbox (badness 2626) in paragraph at lines 15--16 []\T1/phv/m/n/10 integer func-tion [][]register[]_[]diag[]_[]field[]_[]scalar[] _[]fms[][] (module[]_[]name, field[]_[]name, init[]_[]time, long[]_[]name, unit s, Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]array[]_[]fms [3866] Underfull \hbox (badness 10000) in paragraph at lines 116--117 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]scalar[]_[]fms [3867] [3868]) (./interfacemom__restart_1_1register__restart__field.tex [3869] [3870] [3871] [3872] [3873] [3874] [3875] Underfull \vbox (badness 10000) has occurred while \output is active [3876] [3877] [3878]) (./interfacemom__restart_1_1register__restart__pair.tex [3879] [3880]) (./structmom__regridding_1_1regridding__cs.tex [3881] [3882 <./structmo m__regridding_1_1regridding__cs__coll__graph.pdf>] [3883]) (./structmom__regularize__layers_1_1regularize__layers__cs.tex [3884 <./structm om__regularize__layers_1_1regularize__layers__cs__coll__graph.pdf>]) (./structmom__remapping_1_1remapping__cs.tex [3885] [3886 <./structmom__remappi ng_1_1remapping__cs__coll__graph.pdf>]) (./interfacemom__coms_1_1reproducing__sum.tex [3887] Underfull \hbox (badness 10000) detected at line 60 [][][] [3888] Underfull \vbox (badness 10000) has occurred while \output is active [3889] Underfull \hbox (badness 10000) detected at line 200 [][][] [3890] Underfull \vbox (badness 10000) has occurred while \output is active [3891] Underfull \vbox (badness 10000) has occurred while \output is active [3892]) (./interfacemom__coms_1_1reproducing__sum__efp.tex [3893] Underfull \hbox (badness 10000) detected at line 54 [][][] [3894] Underfull \vbox (badness 10000) has occurred while \output is active [3895]) (./structrgc__tracer_1_1rgc__tracer__cs.tex [3896 <./structrgc__tracer_1_1rgc__ tracer__cs__coll__graph.pdf>]) (./structcoord__rho_1_1rho__cs.tex [3897]) (./interfacemom__array__transform_1_1rotate__array.tex [3898 <./structcoord__rh o_1_1rho__cs__coll__graph.pdf>] [3899] [3900] Underfull \vbox (badness 10000) has occurred while \output is active [3901]) (./interfacemom__array__transform_1_1rotate__array__pair.tex [3902] [3903] [3904]) (./interfacemom__array__transform_1_1rotate__vector.tex [3905] [3906] Overfull \vbox (29.91698pt too high) has occurred while \output is active [3907]) (./interfacemom__transform__fms_1_1rotated__mpp__chksum.tex) (./interfacemom__transform__fms_1_1rotated__time__interp__external.tex [3908] Overfull \vbox (46.10497pt too high) has occurred while \output is active [3909]) (./interfacemom__transform__fms_1_1rotated__write__field.tex) (./interfacemom__safe__alloc_1_1safe__alloc__alloc.tex [3910] Overfull \vbox (22.88931pt too high) has occurred while \output is active [3911] [3912]) (./interfacemom__safe__alloc_1_1safe__alloc__ptr.tex [3913] [3914] [3915] [3916] Overfull \vbox (27.44069pt too high) has occurred while \output is active [3917]) (./structscm__cvmix__tests_1_1scm__cvmix__tests__cs.tex [3918 <./struct scm__cvmix__tests_1_1scm__cvmix__tests__cs__coll__graph.pdf>]) (./structmom__open__boundary_1_1segment__tracer__registry__type.tex [3919]) (./structmom__set__diffusivity_1_1set__diffusivity__cs.tex [3920 <./structmom__ open__boundary_1_1segment__tracer__registry__type__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3921] [3922 <./structmom__set__diffusivity_1_1set__diffusivity__cs__coll__graph.pdf>] [3923] [3924] [3925]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__field.tex [3926] [3927] [3928]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__vel__field.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [3929] Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [3930] [3931]) (./structmom__set__visc_1_1set__visc__cs.tex [3932] [3933 <./str uctmom__set__visc_1_1set__visc__cs__coll__graph.pdf>] [3934]) (./structshelfwave__initialization_1_1shelfwave__obc__cs.tex [3935]) (./structcoord__sigma_1_1sigma__cs.tex [3936 <./structshelfwave__initialization _1_1shelfwave__obc__cs__coll__graph.pdf>]) (./structcoord__slight_1_1slight__cs.tex [3937 <./structcoord__sigma_1_1sigma__ cs__coll__graph.pdf>] [3938 <./structcoord__slight_1_1slight__cs__coll__graph.p df>]) (./structmom__sponge_1_1sponge__cs.tex [3939 <./structmom__sponge_1_1spon ge__cs__coll__graph.pdf>] [3940]) (./interfaceregrid__consts_1_1state__dependent.tex [3941]) (./structmom__checksum__packages_1_1stats.tex [3942]) (./structmom__sum__output_1_1sum__output__cs.tex [3943 <./structmom__checksum__ packages_1_1stats__coll__graph.pdf>] [3944 <./structmom__sum__output_1_1sum__ou tput__cs__coll__graph.pdf>] [3945]) (./structmom__variables_1_1surface.tex [3946] [3947 <./structmom__variables_1_1surface__coll__graph.pdf>]) (./structmom__diagnostics_1_1surface__diag__ids.tex [3948] [3949 <./structmom__ diagnostics_1_1surface__diag__ids__coll__graph.pdf>]) (./structmom__surface__forcing_1_1surface__forcing__cs.tex [3950] [3951 <./stru ctmom__surface__forcing_1_1surface__forcing__cs__coll__graph.pdf>] [3952] [3953] [3954] [3955]) (./structmom__surface__forcing__gfdl_1_1surface__forcing__cs.tex [3956] [3957 <./structmom__surface__forcing__gfdl_1_1surface__forcing__cs__coll__graph .pdf>] [3958] [3959]) (./structmom__variables_1_1thermo__var__ptrs.tex [3960] [3961 <./structmom__variables_1_1thermo__var__ptrs__coll__graph.pdf>]) (./structmom__thickness__diffuse_1_1thickness__diffuse__cs.tex [3962] [3963 <./ structmom__thickness__diffuse_1_1thickness__diffuse__cs__coll__graph.pdf>] [3964]) (./structtidal__bay__initialization_1_1tidal__bay__obc__cs.tex [3965]) (./structmom__tidal__forcing_1_1tidal__forcing__cs.tex [3966 <./structtidal__ba y__initialization_1_1tidal__bay__obc__cs__coll__graph.pdf>] [3967 <./structmom_ _tidal__forcing_1_1tidal__forcing__cs__coll__graph.pdf>]) (./structmom__tidal__mixing_1_1tidal__mixing__cs.tex [3968] [3969 <./structmom_ _tidal__mixing_1_1tidal__mixing__cs__coll__graph.pdf>] [3970] [3971]) (./structmom__tidal__mixing_1_1tidal__mixing__diags.tex [3972] [3973 <./structm om__tidal__mixing_1_1tidal__mixing__diags__coll__graph.pdf>]) (./structmom__tracer__advect_1_1tracer__advect__cs.tex [3974]) (./structmom__tracer__flow__control_1_1tracer__flow__control__cs.tex [3975 <./s tructmom__tracer__advect_1_1tracer__advect__cs__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3976] [3977 <./structmom__tracer__flow__control_1_1tracer__flow__control__cs__coll__g raph.pdf>] [3978]) (./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs.tex Underfull \vbox (badness 1237) has occurred while \output is active [3979] [3980 <./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs__coll__graph.pdf >] [3981]) (./structmom__tracer__registry_1_1tracer__registry__type.tex) (./structmom__tracer__registry_1_1tracer__type.tex [3982 <./structmom__tracer__ registry_1_1tracer__registry__type__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3983] [3984 <./structmom__tracer__registry_1_1tracer__type__coll__graph.pdf>] [3985] [3986]) (./structmom__diagnostics_1_1transport__diag__ids.tex [3987] [3988 <./structmom__diagnostics_1_1transport__diag__ids__coll__graph.pdf>]) (./interfacemom__checksums_1_1uchksum.tex [3989] [3990] Underfull \vbox (badness 10000) has occurred while \output is active [3991] [3992] [3993] Underfull \vbox (badness 10000) has occurred while \output is active [3994]) (./structmom__unit__scaling_1_1unit__scale__type.tex [3995] [3996 <./structmom_ _unit__scaling_1_1unit__scale__type__coll__graph.pdf>]) (./structmom__boundary__update_1_1update__obc__cs.tex [3997] [3998 <./structmom __boundary__update_1_1update__obc__cs__coll__graph.pdf>]) (./structuser__change__diffusivity_1_1user__change__diff__cs.tex [3999 <./struc tuser__change__diffusivity_1_1user__change__diff__cs__coll__graph.pdf>]) (./structuser__shelf__init_1_1user__ice__shelf__cs.tex [4000]) (./structuser__revise__forcing_1_1user__revise__forcing__cs.tex [4001 <./struct user__shelf__init_1_1user__ice__shelf__cs__coll__graph.pdf>]) (./structuser__surface__forcing_1_1user__surface__forcing__cs.tex [4002 <./stru ctuser__revise__forcing_1_1user__revise__forcing__cs__coll__graph.pdf>] [4003 <./structuser__surface__forcing_1_1user__surface__forcing__cs__coll__grap h.pdf>]) (./structuser__tracer__example_1_1user__tracer__example__cs.tex [4004 <./structuser__tracer__example_1_1user__tracer__example__cs__coll__graph. pdf>]) (./interfacemom__checksums_1_1uvchksum.tex [4005] Overfull \vbox (17.3705pt too high) has occurred while \output is active [4006] [4007] [4008] [4009]) (./structmom__io_1_1vardesc.tex [4010 <./structmom __io_1_1vardesc__coll__graph.pdf>]) (./structmom__lateral__mixing__coeffs_1_1varmix__cs.tex [4011 <./structmom__lat eral__mixing__coeffs_1_1varmix__cs__coll__graph.pdf>] [4012] [4013] [4014]) (./interfacemom__checksums_1_1vchksum.tex [4015] [4016] Underfull \vbox (badness 10000) has occurred while \output is active [4017] Overfull \vbox (14.08534pt too high) has occurred while \output is active [4018] [4019] Underfull \vbox (badness 10000) has occurred while \output is active [4020]) (./interfacemom__debugging_1_1vec__chksum.tex [4021] Overfull \vbox (18.60503pt too high) has occurred while \output is active [4022]) (./interfacemom__debugging_1_1vec__chksum__a.tex [4023] [4024]) (./interfacemom__debugging_1_1vec__chksum__b.tex [4025] [4026] [4027]) (./interfacemom__debugging_1_1vec__chksum__c.tex [4028] Overfull \vbox (18.60503pt too high) has occurred while \output is active [4029]) (./structmom__verticalgrid_1_1verticalgrid__type.tex [4030 <./structmom __verticalgrid_1_1verticalgrid__type__coll__graph.pdf>] [4031]) (./structmom__vert__friction_1_1vertvisc__cs.tex [4032] [4033 <./structmom__ver t__friction_1_1vertvisc__cs__coll__graph.pdf>] [4034] [4035]) (./structmom__variables_1_1vertvisc__type.tex [4036] [4037 <./structmom__variab les_1_1vertvisc__type__coll__graph.pdf>]) (./structmom__wave__interface_1_1wave__parameters__cs.tex [4038] [4039 <./struc tmom__wave__interface_1_1wave__parameters__cs__coll__graph.pdf>]) (./structmom__wave__speed_1_1wave__speed__cs.tex [4040] [4041 <./structmom__wav e__speed_1_1wave__speed__cs__coll__graph.pdf>]) (./structmom__wave__structure_1_1wave__structure__cs.tex [4042 <./structmom__wa ve__structure_1_1wave__structure__cs__coll__graph.pdf>]) (./structmom__write__cputime_1_1write__cputime__cs.tex [4043]) (./structcoord__zlike_1_1zlike__cs.tex [4044 <./structmom__write__cputime_1_1wr ite__cputime__cs__coll__graph.pdf>]) [4045 <./structcoord__zlike_1_1zlike__cs__ coll__graph.pdf>] [4046] Chapter 49. (./MOM__memory_8h.tex Underfull \hbox (badness 8189) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/config[]_[]src/dynamic[] _[]symmetric/[]M[]O[]M[]_[]memory.h File [4047 <./MOM__memory_8h__incl.pdf>]) (./MOM__memory__macros_8h.tex Underfull \hbox (badness 10000) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/src/framework/[]M[]O[]M[ ]_[]memory[]_[]macros.h File Ref-er- [4048] [4049 <./MOM__memory__macros_8h__dep__incl.pdf>] [4050] [4051] [4052]) [4053] (./refman.bbl (./refman.brf) [4054] [4055] [4056]) [4057] [4058] (./refman.ind Underfull \hbox (badness 10000) in paragraph at lines 3--5 []\T1/phv/m/n/10 /home/cermak/src/[]M[]O[]M6.[]devrob/config[]_[]src/dynamic[]_ [] Underfull \hbox (badness 10000) in paragraph at lines 5--7 []\T1/phv/m/n/10 /home/cermak/src/[]M[]O[]M6.[]devrob/src/framework/[]M[]O[]M[] _[] [4059] [4060] Underfull \hbox (badness 10000) in paragraph at lines 325--327 []\T1/phv/m/n/10 boundary[]_[]impulse[]_[]tracer[]::boundary[]_[]impulse[]_[]tr acer[]_[]cs, [4061] [4062] Underfull \hbox (badness 10000) in paragraph at lines 506--508 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]derivs[] _[]linear, Underfull \hbox (badness 10000) in paragraph at lines 510--512 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]nemo[]::calculate[]_[]density[]_[]derivs[]_[ ]nemo, Underfull \hbox (badness 10000) in paragraph at lines 514--516 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[] _[]teos10, Underfull \hbox (badness 10000) in paragraph at lines 518--520 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]derivs[] _[]wright, Underfull \hbox (badness 10000) in paragraph at lines 526--528 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]derivs[] _[]linear, Underfull \hbox (badness 10000) in paragraph at lines 530--532 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]nemo[]::calculate[]_[]density[]_[]derivs[]_[ ]nemo, Underfull \hbox (badness 10000) in paragraph at lines 534--536 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[] _[]teos10, Underfull \hbox (badness 10000) in paragraph at lines 538--540 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]derivs[] _[]wright, Underfull \hbox (badness 10000) in paragraph at lines 571--573 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 575--577 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 579--581 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 587--589 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 591--593 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[] _[] [4063] Underfull \hbox (badness 10000) in paragraph at lines 595--597 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 621--623 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]unesco[]::calculate[]_[]spec[]_[]vol[]_[]une sco, Underfull \hbox (badness 10000) in paragraph at lines 641--643 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]unesco[]::calculate[]_[]spec[]_[]vol[]_[]une sco, [4064] [4065] [4066] [4067] [4068] [4069] [4070] Underfull \hbox (badness 10000) in paragraph at lines 1426--1428 []\T1/phv/m/n/10 dumbbell[]_[]surface[]_[]forcing[]::dumbbell[]_[]surface[]_[]f orcing[]_[]cs, [4071] [4072] [4073] [4074] [4075] Underfull \hbox (badness 10000) in paragraph at lines 2093--2095 []| \T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]an d[]_[] Underfull \hbox (badness 10000) in paragraph at lines 2097--2099 []| \T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]an d[]_[] [4076] [4077] [4078] [4079] [4080] [4081] [4082] [4083] [4084] [4085] Underfull \hbox (badness 10000) in paragraph at lines 3240--3242 []\T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_[] field[]_[]fms, [4086] [4087] Underfull \hbox (badness 10000) in paragraph at lines 3575--3577 []\T1/phv/m/n/10 mom[]_[]dynamics[]_[]unsplit[]_[]rk2[]::mom[]_[]dyn[]_[]unspli t[]_[]rk2[]_[]cs, [4088] Underfull \hbox (badness 10000) in paragraph at lines 3714--3716 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]l inear, Underfull \hbox (badness 10000) in paragraph at lines 3737--3739 []\T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3741--3743 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]l inear, Underfull \hbox (badness 10000) in paragraph at lines 3781--3783 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]te os10, Underfull \hbox (badness 10000) in paragraph at lines 3783--3785 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]t eos10, Underfull \hbox (badness 10000) in paragraph at lines 3791--3793 []\T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[ ]teos10, Underfull \hbox (badness 10000) in paragraph at lines 3797--3799 []\T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3799--3801 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]te os10, Underfull \hbox (badness 10000) in paragraph at lines 3801--3803 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]t eos10, [4089] Underfull \hbox (badness 10000) in paragraph at lines 3849--3851 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]wr ight, Underfull \hbox (badness 10000) in paragraph at lines 3851--3853 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]w right, Underfull \hbox (badness 10000) in paragraph at lines 3868--3870 []\T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3870--3872 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]wr ight, Underfull \hbox (badness 10000) in paragraph at lines 3872--3874 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]w right, [4090] [4091] Underfull \hbox (badness 10000) in paragraph at lines 4161--4163 []\T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]and[ ]_[]extrap[]_[] [4092] [4093] Underfull \hbox (badness 10000) in paragraph at lines 4361--4363 []\T1/phv/m/n/10 mom[]_[]lateral[]_[]boundary[]_[]diffusion[]::lateral[]_[]boun dary[]_[] [4094] [4095] Underfull \hbox (badness 10000) in paragraph at lines 4633--4635 []\T1/phv/m/n/10 mom[]_[]open[]_[]boundary[]::segment[]_[]tracer[]_[]registry[] _[]type, [4096] [4097] Underfull \hbox (badness 10000) in paragraph at lines 5002--5004 []| \T1/phv/m/n/10 mom[]_[]checksum[]_[]packages[]::mom[]_[]state[]_[]chksum, Underfull \hbox (badness 10000) in paragraph at lines 5006--5008 []| \T1/phv/m/n/10 mom[]_[]checksum[]_[]packages[]::mom[]_[]state[]_[]chksum, [4098] Underfull \hbox (badness 10000) in paragraph at lines 5110--5112 []\T1/phv/m/n/10 mom[]_[]surface[]_[]forcing[]_[]gfdl[]::ice[]_[]ocean[]_[]boun dary[]_[]type, [4099] [4100] [4101] [4102] [4103] [4104] [4105] [4106] Underfull \hbox (badness 10000) in paragraph at lines 6142--6144 []| \T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_ []field[] [4107] Underfull \hbox (badness 10000) in paragraph at lines 6151--6153 []| \T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_ []field[] [4108] [4109] Underfull \hbox (badness 10000) in paragraph at lines 6497--6499 []| \T1/phv/m/n/10 mom[]_[]transform[]_[]fms[]::rotated[]_[]time[]_[]interp[]_[ ]external, [4110] [4111] Underfull \hbox (badness 10000) in paragraph at lines 6726--6728 []| \T1/phv/m/n/10 mom[]_[]ale[]_[]sponge[]::set[]_[]up[]_[]ale[]_[]sponge[]_[] vel[]_[]field, Underfull \hbox (badness 10000) in paragraph at lines 6730--6732 []| \T1/phv/m/n/10 mom[]_[]ale[]_[]sponge[]::set[]_[]up[]_[]ale[]_[]sponge[]_[] vel[]_[]field, [4112] [4113] [4114] [4115] [4116] [4117]) (./refman.aux) Package rerunfilecheck Warning: File `refman.brf' has changed. (rerunfilecheck) Rerun to get bibliographical references right. LaTeX Warning: There were undefined references. LaTeX Warning: There were multiply-defined labels. ) (see the transcript file for additional information)pdfTeX warning (dest): name {MESO__surface__forcing_8F90_source} has been referenced but does not exist, re placed by a fixed one pdfTeX warning (dest): name{MOM__diabatic__aux_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__tidal__mixing_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__kappa__shear_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__barotropic_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM_8F90_source} has been referenced but does not e xist, replaced by a fixed one pdfTeX warning (dest): name{MOM__variables_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__surface__forcing_8F90_source} has been referen ced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{write__ocean__obs_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__types_8F90_source} has been referenced b ut does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__core_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{kdtree_8f90_source} has been referenced but does no t exist, replaced by a fixed one {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb> Output written on refman.pdf (4191 pages, 15112291 bytes). Transcript written on refman.log. latex_count=8 ; \ while egrep -s 'Rerun (LaTeX|to get cross-references right)' refman.log && [ $latex_count -gt 0 ] ;\ do \ echo "Rerunning latex...." ;\ pdflatex -interaction=nonstopmode refman ;\ latex_count=`expr $latex_count - 1` ;\ done makeindex refman.idx This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support). Scanning input file refman.idx........done (4546 entries accepted, 0 rejected). Sorting entries............................................done (61417 comparisons). Generating output file refman.ind........done (7325 lines written, 0 warnings). Output written in refman.ind. Transcript written in refman.ilg. pdflatex -interaction=nonstopmode refman This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./refman.tex LaTeX2e <2020-02-02> patch level 2 L3 programming layer <2020-02-14> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2019/12/20 v1.4l Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/fixltx2e.sty Package fixltx2e Warning: fixltx2e is not required with releases after 2015 (fixltx2e) All fixes are now in the LaTeX kernel. (fixltx2e) See the latexrelease package for details. ) (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty) (./doxygen.sty (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/colortbl/colortbl.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tabu/tabu.sty (/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/tabularx.sty) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty)) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjustbox.sty (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/trimclip.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg))) (/usr/share/texlive/texmf-dist/tex/latex/collectbox/collectbox.sty) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/tc-pdftex.def)) (/usr/share/texlive/texmf-dist/tex/latex/ifoddpage/ifoddpage.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/wasysym.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/helvet.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/courier.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/sectsty/sectsty.sty LaTeX Warning: Command \underbar has changed. Check if current package is valid. LaTeX Warning: Command \underline has changed. Check if current package is valid. ) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/tocloft/tocloft.sty) Writing index file refman.idx (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/backref.sty (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)))) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty) (/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty) (/usr/share/texlive/texmf-dist/tex/latex/caption/ltcaption.sty)) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def) (./refman.aux LaTeX Warning: Label `namespacemom__diag__mediator_downsampling' multiply defin ed. ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (./refman.out) (./refman.out) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/uwasy.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] [2] (./refman.toc [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71]) [72] Chapter 1. (./index.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd)) [1] [2] Chapter 2. (./ALE.tex LaTeX Font Warning: Font shape `U/wasy/b/n' in size <7> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. LaTeX Font Warning: Font shape `U/wasy/b/n' in size <5> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. [3]) [4] Chapter 3. (./ALE_Timestep.tex [5 <./remapping1.png>] Underfull \vbox (badness 10000) has occurred while \output is active [6 <./rema pping2.png>]) [7 <./remapping3.png>] [8] Chapter 4. (./Baroclinic_Momentum_Equations.tex Underfull \vbox (badness 7326) has occurred while \output is active [9] Underfull \vbox (badness 10000) has occurred while \output is active [10 <./tim estep_MOM6.png>]) [11 <./timestep_ROMS.png>] [12] Chapter 5. (./Barotropic_Baroclinic_Coupling.tex [13] [14] [15] Underfull \vbox (badness 10000) has occurred while \output is active [16 <./h_P PM.png>] [17 <./Newton_PPM.png>] Underfull \vbox (badness 4699) has occurred while \output is active [18] [19 <./bottom_drag.png>] [20]) [21 <./bt_bc_thickness.png>] [22] Chapter 6. (./Barotropic_Momentum_Equations.tex) [23] [24] Chapter 7. (./Discrete_Coriolis.tex [25]) [26] [27] [28] Chapter 8. (./Discrete_Grids.tex [29 <./Arakawa_C_grid.png>] [30 <./Grid_metrics.png>]) [31 <./cell_3d.png>] [32] Chapter 9. (./Discrete_OBC.tex) [33] [34] Chapter 10. (./Discrete_PG.tex [35] [36 <./PG_loop.png>]) [37] [38] Chapter 11. (./Energetic_Consistency.tex) [39] [40] Chapter 12. (./Finite_Difference_Operators.tex) [41] [42] Chapter 13. (./General_Coordinate.tex) [43] [44] Chapter 14. (./Governing_Equations.tex [45]) [46] Chapter 15. (./Notation.tex) [47] [48] Chapter 16. (./PPM.tex Underfull \vbox (badness 5374) has occurred while \output is active [49] [50 <./ppm_arc.png>]) [51] [52] Chapter 17. (./Sea_Ice.tex) [53] [54] Chapter 18. (./Solar_Radiation.tex) [55] [56] Chapter 19. (./Specifics.tex [57]) [58] Chapter 20. (./Timestep_Overview.tex) [59 <./timesteps_4.png>] [60] Chapter 21. (./Equation_of_State.tex [61]) [62] Chapter 22. (./Diagnostics.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. [63] [64] [65] [66]) [67] [68] Chapter 23. (./Domain_Decomposition.tex) [69] [70] Chapter 24. (./Global_Grids.tex) [71] [72] Chapter 25. (./Horizontal_Indexing.tex Underfull \vbox (badness 7981) has occurred while \output is active [73] [74] Underfull \vbox (badness 10000) has occurred while \output is active [75 <./Hor izontal_NE_indexing_nonsym.png>] Underfull \hbox (badness 10000) in paragraph at lines 54--55 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed) []:[]: D !$\ OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at h-points Overfull \hbox (16.7466pt too wide) in paragraph at lines 55--56 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed, GV%ke) []:[] : h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Layer thickness [76 <./Horizontal_NE_indexing_sym.png>] Underfull \hbox (badness 10000) in paragraph at lines 61--62 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%jsd[]:HI%jed, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow Underfull \hbox (badness 10000) in paragraph at lines 67--68 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%JsdB[]:HI%JedB, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow Overfull \hbox (16.7466pt too wide) in paragraph at lines 72--73 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB) []:[]: D q !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at q-points Overfull \hbox (16.7466pt too wide) in paragraph at lines 73--74 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB, GV%ke) [ ]:[]: vort !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Vertical ) [77] [78] Chapter 26. (./Parallel_IO.tex) [79] [80] Chapter 27. (./Regional_Grids.tex) [81] [82] Chapter 28. (./Runtime_Parameter_System.tex [83] [84]) [85] [86] Chapter 29. (./Testing.tex Underfull \hbox (badness 10000) detected at line 12 [][][] [87] [88 <./consortium.png>] Underfull \hbox (badness 10000) detected at line 73 [][][] [89] [90 <./Rotated_indices.png>]) [91] [92] Chapter 30. (./Vertical_Grids.tex) [93] [94] Chapter 31. (./CVMix_KPP.tex [95] Underfull \hbox (badness 10000) detected at line 10 [][][] ) [96] Chapter 32. (./Tracer_Advection.tex [97]) [98] Chapter 33. (./Discrete_Tracer.tex) [99] [100] Chapter 34. (./Horizontal_Diffusion.tex [101 <./eddy_fluxes.png>] [102 <./shao0.png>] [103 <./shao1.png>] [104 <./shao2.png>] [105 <./shao3.png>] Underfull \vbox (badness 10000) has occurred while \output is active [106 <./sh ao4.png>] Underfull \vbox (badness 6825) has occurred while \output is active [107 <./sha o5.png>] Underfull \vbox (badness 10000) has occurred while \output is active [108 <./sb l1.png>]) [109 <./sbl2.png>] [110] Chapter 35. (./Passive_Tracers.tex) [111] [112] Chapter 36. (./Tracer_Fluxes.tex) [113] [114] Chapter 37. (./Tracer_Timestep.tex) [115] [116] Chapter 38. (./Tracer_Transport_Equations.tex [117 <./PPM_1d.png>] [118]) [119] [120] Chapter 39. (./Vertical_Diffusion.tex) [121] [122] Chapter 40. (./md__home_cermak_src_MOM6_8devrob_config_src_external_GFDL_ocean_BGC_README.t ex) [123] [124] Chapter 41. (./md__home_cermak_src_MOM6_8devrob_config_src_external_ODA_hooks_README.tex) [125] [126] Chapter 42. (./md__home_cermak_src_MOM6_8devrob_config_src_external_README.tex) [127] [128] Chapter 43. (./todo.tex [129]) [130] Chapter 44. (./namespaces.tex [131] Underfull \vbox (badness 6708) has occurred while \output is active [132] Underfull \vbox (badness 10000) has occurred while \output is active [133] [134] Underfull \vbox (badness 7667) has occurred while \output is active [135] Underfull \vbox (badness 6708) has occurred while \output is active [136] Underfull \vbox (badness 7667) has occurred while \output is active [137] [138]) [139] [140] Chapter 45. (./annotated.tex [141] Underfull \vbox (badness 10000) has occurred while \output is active [142] [143] Underfull \vbox (badness 5908) has occurred while \output is active [144] [145] Underfull \vbox (badness 6708) has occurred while \output is active [146] [147] [148] Underfull \vbox (badness 5908) has occurred while \output is active [149] Underfull \vbox (badness 5231) has occurred while \output is active [150] Underfull \vbox (badness 10000) has occurred while \output is active [151] Underfull \vbox (badness 6708) has occurred while \output is active [152]) [153] [154] Chapter 46. (./files.tex LaTeX Warning: Reference `MOM__surface__forcing__gfdl_8F90' on page 155 undefin ed on input line 3. LaTeX Warning: Reference `ocean__model__MOM_8F90' on page 155 undefined on inpu t line 4. LaTeX Warning: Reference `FMS__coupler__util_8F90' on page 155 undefined on inp ut line 6. LaTeX Warning: Reference `generic__tracer_8F90' on page 155 undefined on input line 7. LaTeX Warning: Reference `generic__tracer__utils_8F90' on page 155 undefined on input line 8. LaTeX Warning: Reference `kdtree_8f90' on page 155 undefined on input line 9. LaTeX Warning: Reference `ocean__da__core_8F90' on page 155 undefined on input line 10. LaTeX Warning: Reference `ocean__da__types_8F90' on page 155 undefined on input line 11. LaTeX Warning: Reference `write__ocean__obs_8F90' on page 155 undefined on inpu t line 12. LaTeX Warning: Reference `atmos__ocean__fluxes_8F90' on page 155 undefined on i nput line 13. LaTeX Warning: Reference `MESO__surface__forcing_8F90' on page 155 undefined on input line 14. LaTeX Warning: Reference `MOM__driver_8F90' on page 155 undefined on input line 15. LaTeX Warning: Reference `MOM__surface__forcing_8F90' on page 155 undefined on input line 16. LaTeX Warning: Reference `user__surface__forcing_8F90' on page 155 undefined on input line 17. LaTeX Warning: Reference `coord__adapt_8F90' on page 155 undefined on input lin e 18. LaTeX Warning: Reference `coord__hycom_8F90' on page 155 undefined on input lin e 19. LaTeX Warning: Reference `coord__rho_8F90' on page 155 undefined on input line 20. LaTeX Warning: Reference `coord__sigma_8F90' on page 155 undefined on input lin e 21. LaTeX Warning: Reference `coord__slight_8F90' on page 155 undefined on input li ne 22. LaTeX Warning: Reference `coord__zlike_8F90' on page 155 undefined on input lin e 23. LaTeX Warning: Reference `MOM__ALE_8F90' on page 155 undefined on input line 24 . LaTeX Warning: Reference `MOM__regridding_8F90' on page 155 undefined on input line 25. LaTeX Warning: Reference `MOM__remapping_8F90' on page 155 undefined on input l ine 26. LaTeX Warning: Reference `P1M__functions_8F90' on page 155 undefined on input l ine 27. LaTeX Warning: Reference `P3M__functions_8F90' on page 155 undefined on input l ine 28. LaTeX Warning: Reference `PCM__functions_8F90' on page 155 undefined on input l ine 29. LaTeX Warning: Reference `PLM__functions_8F90' on page 155 undefined on input l ine 30. LaTeX Warning: Reference `polynomial__functions_8F90' on page 155 undefined on input line 31. LaTeX Warning: Reference `PPM__functions_8F90' on page 155 undefined on input l ine 32. LaTeX Warning: Reference `PQM__functions_8F90' on page 155 undefined on input l ine 33. LaTeX Warning: Reference `regrid__consts_8F90' on page 155 undefined on input l ine 34. LaTeX Warning: Reference `regrid__edge__values_8F90' on page 155 undefined on i nput line 35. LaTeX Warning: Reference `regrid__interp_8F90' on page 155 undefined on input l ine 36. [155] LaTeX Warning: Reference `regrid__solvers_8F90' on page 156 undefined on input line 37. LaTeX Warning: Reference `MOM_8F90' on page 156 undefined on input line 38. LaTeX Warning: Reference `MOM__barotropic_8F90' on page 156 undefined on input line 39. LaTeX Warning: Reference `MOM__boundary__update_8F90' on page 156 undefined on input line 40. LaTeX Warning: Reference `MOM__checksum__packages_8F90' on page 156 undefined o n input line 41. LaTeX Warning: Reference `MOM__continuity_8F90' on page 156 undefined on input line 42. LaTeX Warning: Reference `MOM__continuity__PPM_8F90' on page 156 undefined on i nput line 43. LaTeX Warning: Reference `MOM__CoriolisAdv_8F90' on page 156 undefined on input line 44. LaTeX Warning: Reference `MOM__density__integrals_8F90' on page 156 undefined o n input line 45. LaTeX Warning: Reference `MOM__dynamics__split__RK2_8F90' on page 156 undefined on input line 46. LaTeX Warning: Reference `MOM__dynamics__unsplit_8F90' on page 156 undefined on input line 47. LaTeX Warning: Reference `MOM__dynamics__unsplit__RK2_8F90' on page 156 undefin ed on input line 48. LaTeX Warning: Reference `MOM__forcing__type_8F90' on page 156 undefined on inp ut line 49. LaTeX Warning: Reference `MOM__grid_8F90' on page 156 undefined on input line 5 0. LaTeX Warning: Reference `MOM__interface__heights_8F90' on page 156 undefined o n input line 51. LaTeX Warning: Reference `MOM__isopycnal__slopes_8F90' on page 156 undefined on input line 52. LaTeX Warning: Reference `MOM__open__boundary_8F90' on page 156 undefined on in put line 53. LaTeX Warning: Reference `MOM__PressureForce_8F90' on page 156 undefined on inp ut line 54. LaTeX Warning: Reference `MOM__PressureForce__FV_8F90' on page 156 undefined on input line 55. LaTeX Warning: Reference `MOM__PressureForce__Montgomery_8F90' on page 156 unde fined on input line 56. LaTeX Warning: Reference `MOM__transcribe__grid_8F90' on page 156 undefined on input line 57. LaTeX Warning: Reference `MOM__unit__tests_8F90' on page 156 undefined on input line 58. LaTeX Warning: Reference `MOM__variables_8F90' on page 156 undefined on input l ine 59. LaTeX Warning: Reference `MOM__verticalGrid_8F90' on page 156 undefined on inpu t line 60. LaTeX Warning: Reference `MOM__debugging_8F90' on page 156 undefined on input l ine 61. LaTeX Warning: Reference `MOM__diagnostics_8F90' on page 156 undefined on input line 62. LaTeX Warning: Reference `MOM__obsolete__diagnostics_8F90' on page 156 undefine d on input line 63. LaTeX Warning: Reference `MOM__obsolete__params_8F90' on page 156 undefined on input line 64. LaTeX Warning: Reference `MOM__PointAccel_8F90' on page 156 undefined on input line 65. LaTeX Warning: Reference `MOM__sum__output_8F90' on page 156 undefined on input line 66. LaTeX Warning: Reference `MOM__wave__speed_8F90' on page 156 undefined on input line 67. LaTeX Warning: Reference `MOM__wave__structure_8F90' on page 156 undefined on i nput line 68. LaTeX Warning: Reference `MOM__EOS_8F90' on page 156 undefined on input line 69 . LaTeX Warning: Reference `MOM__EOS__linear_8F90' on page 156 undefined on input line 70. LaTeX Warning: Reference `MOM__EOS__NEMO_8F90' on page 156 undefined on input l ine 71. LaTeX Warning: Reference `MOM__EOS__TEOS10_8F90' on page 156 undefined on input line 72. LaTeX Warning: Reference `MOM__EOS__UNESCO_8F90' on page 156 undefined on input line 73. LaTeX Warning: Reference `MOM__EOS__Wright_8F90' on page 156 undefined on input line 74. LaTeX Warning: Reference `MOM__TFreeze_8F90' on page 156 undefined on input lin e 75. LaTeX Warning: Reference `MOM__array__transform_8F90' on page 156 undefined on input line 76. LaTeX Warning: Reference `MOM__checksums_8F90' on page 156 undefined on input l ine 77. LaTeX Warning: Reference `MOM__coms_8F90' on page 156 undefined on input line 7 8. LaTeX Warning: Reference `MOM__constants_8F90' on page 156 undefined on input l ine 79. LaTeX Warning: Reference `MOM__cpu__clock_8F90' on page 156 undefined on input line 80. LaTeX Warning: Reference `MOM__diag__manager__wrapper_8F90' on page 156 undefin ed on input line 81. LaTeX Warning: Reference `MOM__diag__mediator_8F90' on page 156 undefined on in put line 82. LaTeX Warning: Reference `MOM__diag__remap_8F90' on page 156 undefined on input line 83. LaTeX Warning: Reference `MOM__diag__vkernels_8F90' on page 156 undefined on in put line 84. LaTeX Warning: Reference `MOM__document_8F90' on page 156 undefined on input li ne 85. LaTeX Warning: Reference `MOM__domains_8F90' on page 156 undefined on input lin e 86. LaTeX Warning: Reference `MOM__dyn__horgrid_8F90' on page 156 undefined on inpu t line 87. [156] LaTeX Warning: Reference `MOM__error__handler_8F90' on page 157 undefined on in put line 88. LaTeX Warning: Reference `MOM__file__parser_8F90' on page 157 undefined on inpu t line 89. LaTeX Warning: Reference `MOM__get__input_8F90' on page 157 undefined on input line 90. LaTeX Warning: Reference `MOM__hor__index_8F90' on page 157 undefined on input line 91. LaTeX Warning: Reference `MOM__horizontal__regridding_8F90' on page 157 undefin ed on input line 92. LaTeX Warning: Reference `MOM__intrinsic__functions_8F90' on page 157 undefined on input line 93. LaTeX Warning: Reference `MOM__io_8F90' on page 157 undefined on input line 94. LaTeX Warning: Reference `MOM__random_8F90' on page 157 undefined on input line 96. LaTeX Warning: Reference `MOM__restart_8F90' on page 157 undefined on input lin e 97. LaTeX Warning: Reference `MOM__safe__alloc_8F90' on page 157 undefined on input line 98. LaTeX Warning: Reference `MOM__spatial__means_8F90' on page 157 undefined on in put line 99. LaTeX Warning: Reference `MOM__string__functions_8F90' on page 157 undefined on input line 100. LaTeX Warning: Reference `MOM__time__manager_8F90' on page 157 undefined on inp ut line 101. LaTeX Warning: Reference `MOM__transform__FMS_8F90' on page 157 undefined on in put line 102. LaTeX Warning: Reference `MOM__unit__scaling_8F90' on page 157 undefined on inp ut line 103. LaTeX Warning: Reference `MOM__write__cputime_8F90' on page 157 undefined on in put line 104. LaTeX Warning: Reference `version__variable_8h' on page 157 undefined on input line 105. LaTeX Warning: Reference `MOM__ice__shelf_8F90' on page 157 undefined on input line 106. LaTeX Warning: Reference `MOM__ice__shelf__dynamics_8F90' on page 157 undefined on input line 107. LaTeX Warning: Reference `MOM__ice__shelf__initialize_8F90' on page 157 undefin ed on input line 108. LaTeX Warning: Reference `MOM__ice__shelf__state_8F90' on page 157 undefined on input line 109. LaTeX Warning: Reference `MOM__marine__ice_8F90' on page 157 undefined on input line 110. LaTeX Warning: Reference `user__shelf__init_8F90' on page 157 undefined on inpu t line 111. LaTeX Warning: Reference `MOM__coord__initialization_8F90' on page 157 undefine d on input line 112. LaTeX Warning: Reference `MOM__fixed__initialization_8F90' on page 157 undefine d on input line 113. LaTeX Warning: Reference `MOM__grid__initialize_8F90' on page 157 undefined on input line 114. LaTeX Warning: Reference `MOM__shared__initialization_8F90' on page 157 undefin ed on input line 115. LaTeX Warning: Reference `MOM__state__initialization_8F90' on page 157 undefine d on input line 116. LaTeX Warning: Reference `MOM__tracer__initialization__from__Z_8F90' on page 15 7 undefined on input line 117. LaTeX Warning: Reference `MOM__oda__driver_8F90' on page 157 undefined on input line 118. LaTeX Warning: Reference `MOM__hor__visc_8F90' on page 157 undefined on input l ine 119. LaTeX Warning: Reference `MOM__internal__tides_8F90' on page 157 undefined on i nput line 120. LaTeX Warning: Reference `MOM__lateral__mixing__coeffs_8F90' on page 157 undefi ned on input line 121. LaTeX Warning: Reference `MOM__MEKE_8F90' on page 157 undefined on input line 1 22. LaTeX Warning: Reference `MOM__MEKE__types_8F90' on page 157 undefined on input line 123. LaTeX Warning: Reference `MOM__mixed__layer__restrat_8F90' on page 157 undefine d on input line 124. LaTeX Warning: Reference `MOM__thickness__diffuse_8F90' on page 157 undefined o n input line 125. LaTeX Warning: Reference `MOM__tidal__forcing_8F90' on page 157 undefined on in put line 126. LaTeX Warning: Reference `MOM__ALE__sponge_8F90' on page 157 undefined on input line 127. LaTeX Warning: Reference `MOM__bkgnd__mixing_8F90' on page 157 undefined on inp ut line 128. LaTeX Warning: Reference `MOM__bulk__mixed__layer_8F90' on page 157 undefined o n input line 129. LaTeX Warning: Reference `MOM__CVMix__conv_8F90' on page 157 undefined on input line 130. LaTeX Warning: Reference `MOM__CVMix__ddiff_8F90' on page 157 undefined on inpu t line 131. LaTeX Warning: Reference `MOM__CVMix__KPP_8F90' on page 157 undefined on input line 132. LaTeX Warning: Reference `MOM__CVMix__shear_8F90' on page 157 undefined on inpu t line 133. LaTeX Warning: Reference `MOM__diabatic__aux_8F90' on page 157 undefined on inp ut line 134. LaTeX Warning: Reference `MOM__diabatic__driver_8F90' on page 157 undefined on input line 135. LaTeX Warning: Reference `MOM__diapyc__energy__req_8F90' on page 157 undefined on input line 136. LaTeX Warning: Reference `MOM__energetic__PBL_8F90' on page 157 undefined on in put line 137. LaTeX Warning: Reference `MOM__entrain__diffusive_8F90' on page 157 undefined o n input line 138. LaTeX Warning: Reference `MOM__full__convection_8F90' on page 157 undefined on input line 139. LaTeX Warning: Reference `MOM__geothermal_8F90' on page 157 undefined on input line 140. [157] LaTeX Warning: Reference `MOM__internal__tide__input_8F90' on page 158 undefine d on input line 141. LaTeX Warning: Reference `MOM__kappa__shear_8F90' on page 158 undefined on inpu t line 142. LaTeX Warning: Reference `MOM__opacity_8F90' on page 158 undefined on input lin e 143. LaTeX Warning: Reference `MOM__regularize__layers_8F90' on page 158 undefined o n input line 144. LaTeX Warning: Reference `MOM__set__diffusivity_8F90' on page 158 undefined on input line 145. LaTeX Warning: Reference `MOM__set__viscosity_8F90' on page 158 undefined on in put line 146. LaTeX Warning: Reference `MOM__sponge_8F90' on page 158 undefined on input line 147. LaTeX Warning: Reference `MOM__tidal__mixing_8F90' on page 158 undefined on inp ut line 148. LaTeX Warning: Reference `MOM__vert__friction_8F90' on page 158 undefined on in put line 149. LaTeX Warning: Reference `advection__test__tracer_8F90' on page 158 undefined o n input line 150. LaTeX Warning: Reference `boundary__impulse__tracer_8F90' on page 158 undefined on input line 151. LaTeX Warning: Reference `DOME__tracer_8F90' on page 158 undefined on input lin e 152. LaTeX Warning: Reference `dye__example_8F90' on page 158 undefined on input lin e 153. LaTeX Warning: Reference `dyed__obc__tracer_8F90' on page 158 undefined on inpu t line 154. LaTeX Warning: Reference `ideal__age__example_8F90' on page 158 undefined on in put line 155. LaTeX Warning: Reference `ISOMIP__tracer_8F90' on page 158 undefined on input l ine 156. LaTeX Warning: Reference `MOM__generic__tracer_8F90' on page 158 undefined on i nput line 157. LaTeX Warning: Reference `MOM__lateral__boundary__diffusion_8F90' on page 158 u ndefined on input line 158. LaTeX Warning: Reference `MOM__neutral__diffusion_8F90' on page 158 undefined o n input line 159. LaTeX Warning: Reference `MOM__OCMIP2__CFC_8F90' on page 158 undefined on input line 160. LaTeX Warning: Reference `MOM__offline__aux_8F90' on page 158 undefined on inpu t line 161. LaTeX Warning: Reference `MOM__offline__main_8F90' on page 158 undefined on inp ut line 162. LaTeX Warning: Reference `MOM__tracer__advect_8F90' on page 158 undefined on in put line 163. LaTeX Warning: Reference `MOM__tracer__diabatic_8F90' on page 158 undefined on input line 164. LaTeX Warning: Reference `MOM__tracer__flow__control_8F90' on page 158 undefine d on input line 165. LaTeX Warning: Reference `MOM__tracer__hor__diff_8F90' on page 158 undefined on input line 166. LaTeX Warning: Reference `MOM__tracer__registry_8F90' on page 158 undefined on input line 167. LaTeX Warning: Reference `MOM__tracer__Z__init_8F90' on page 158 undefined on i nput line 168. LaTeX Warning: Reference `oil__tracer_8F90' on page 158 undefined on input line 169. LaTeX Warning: Reference `pseudo__salt__tracer_8F90' on page 158 undefined on i nput line 170. LaTeX Warning: Reference `RGC__tracer_8F90' on page 158 undefined on input line 171. LaTeX Warning: Reference `tracer__example_8F90' on page 158 undefined on input line 172. LaTeX Warning: Reference `adjustment__initialization_8F90' on page 158 undefine d on input line 173. LaTeX Warning: Reference `baroclinic__zone__initialization_8F90' on page 158 un defined on input line 174. LaTeX Warning: Reference `basin__builder_8F90' on page 158 undefined on input l ine 175. LaTeX Warning: Reference `benchmark__initialization_8F90' on page 158 undefined on input line 176. LaTeX Warning: Reference `BFB__initialization_8F90' on page 158 undefined on in put line 177. LaTeX Warning: Reference `BFB__surface__forcing_8F90' on page 158 undefined on input line 178. LaTeX Warning: Reference `circle__obcs__initialization_8F90' on page 158 undefi ned on input line 179. LaTeX Warning: Reference `dense__water__initialization_8F90' on page 158 undefi ned on input line 180. LaTeX Warning: Reference `DOME2d__initialization_8F90' on page 158 undefined on input line 181. LaTeX Warning: Reference `DOME__initialization_8F90' on page 158 undefined on i nput line 182. LaTeX Warning: Reference `dumbbell__initialization_8F90' on page 158 undefined on input line 183. LaTeX Warning: Reference `dumbbell__surface__forcing_8F90' on page 158 undefine d on input line 184. LaTeX Warning: Reference `dyed__channel__initialization_8F90' on page 158 undef ined on input line 185. LaTeX Warning: Reference `dyed__obcs__initialization_8F90' on page 158 undefine d on input line 186. LaTeX Warning: Reference `external__gwave__initialization_8F90' on page 158 und efined on input line 187. LaTeX Warning: Reference `Idealized__Hurricane_8F90' on page 158 undefined on i nput line 188. LaTeX Warning: Reference `ISOMIP__initialization_8F90' on page 158 undefined on input line 189. LaTeX Warning: Reference `Kelvin__initialization_8F90' on page 158 undefined on input line 190. LaTeX Warning: Reference `lock__exchange__initialization_8F90' on page 158 unde fined on input line 191. LaTeX Warning: Reference `MOM__controlled__forcing_8F90' on page 158 undefined on input line 192. LaTeX Warning: Reference `MOM__wave__interface_8F90' on page 158 undefined on i nput line 193. LaTeX Warning: Reference `Neverworld__initialization_8F90' on page 158 undefine d on input line 194. [158] LaTeX Warning: Reference `Phillips__initialization_8F90' on page 159 undefined on input line 195. LaTeX Warning: Reference `RGC__initialization_8F90' on page 159 undefined on in put line 196. LaTeX Warning: Reference `Rossby__front__2d__initialization_8F90' on page 159 u ndefined on input line 197. LaTeX Warning: Reference `SCM__CVMix__tests_8F90' on page 159 undefined on inpu t line 198. LaTeX Warning: Reference `seamount__initialization_8F90' on page 159 undefined on input line 199. LaTeX Warning: Reference `shelfwave__initialization_8F90' on page 159 undefined on input line 200. LaTeX Warning: Reference `sloshing__initialization_8F90' on page 159 undefined on input line 201. LaTeX Warning: Reference `soliton__initialization_8F90' on page 159 undefined o n input line 202. LaTeX Warning: Reference `supercritical__initialization_8F90' on page 159 undef ined on input line 203. LaTeX Warning: Reference `tidal__bay__initialization_8F90' on page 159 undefine d on input line 204. LaTeX Warning: Reference `user__change__diffusivity_8F90' on page 159 undefined on input line 205. LaTeX Warning: Reference `user__initialization_8F90' on page 159 undefined on i nput line 206. LaTeX Warning: Reference `user__revise__forcing_8F90' on page 159 undefined on input line 207. ) [159] [160] Chapter 47. (./namespaceadjustment__initialization.tex [161] [162] [163] [164] [165] Underfull \vbox (badness 10000) has occurred while \output is active [166]) (./namespaceadvection__test__tracer.tex [167] Underfull \hbox (badness 10000) detected at line 64 [][][] [168] [169] [170] [171] [172] Underfull \vbox (badness 10000) has occurred while \output is active [173] [174]) (./namespaceatmos__ocean__fluxes__mod.tex [175] [176]) (./namespacebaroclinic__zone__initialization.tex [177] [178] [179]) (./namespacebasin__builder.tex [180] [181] [182] [183] Underfull \vbox (badness 10000) has occurred while \output is active [184] [185] Overfull \vbox (26.22467pt too high) has occurred while \output is active [186] [187] [188] [189] [190]) (./namespacebenchmark__initialization.tex [191] [192] [193] [194] [195] [196]) (./namespacebfb__initialization.tex [197] Overfull \vbox (6.91788pt too high) has occurred while \output is active [198] [199] [200] [201]) (./namespacebfb__surface__forcing.tex [202] [203] [204] [205]) (./namespaceboundary__impulse__tracer.tex [206] [207] Underfull \hbox (badness 10000) detected at line 75 [][][] [208] [209] [210] [211] [212] Overfull \vbox (16.42203pt too high) has occurred while \output is active [213] [214]) (./namespacecircle__obcs__initialization.tex [215] Underfull \vbox (badness 10000) has occurred while \output is active [216]) (./namespacecoord__adapt.tex [217] [218] Underfull \vbox (badness 10000) has occurred while \output is active [219] [220] [221]) (./namespacecoord__hycom.tex [222] Overfull \vbox (63.99036pt too high) has occurred while \output is active [223] [224] [225]) (./namespacecoord__rho.tex [226] [227] [228] [229] [230] Underfull \vbox (badness 10000) has occurred while \output is active [231] [232] [233] Overfull \vbox (8.41132pt too high) has occurred while \output is active [234] [235]) (./namespacecoord__sigma.tex [236] [237] [238]) (./namespacecoord__slight.tex Underfull \hbox (badness 5316) in paragraph at lines 18--19 []\T1/phv/m/n/10 subroutine, pub-lic [][]set[]_[]slight[]_[]params[][] (CS, max []_[]interface[]_[]depths, max[]_[]layer[]_[]thickness, min[]_[]thickness, Underfull \hbox (badness 940) in paragraph at lines 18--19 \T1/phv/m/n/10 compressibility[]_[]fraction, dz[]_[]ml[]_[]min, nz[]_[]fixed[]_ []surface, Rho[]_[][]M[]L[]_[]avg[]_[]depth, nlay[]_[][]M[]L[]_[]offset, fix[]_ []haloclines, [239] [240] Underfull \vbox (badness 10000) has occurred while \output is active [241] Underfull \vbox (badness 10000) has occurred while \output is active [242] Underfull \vbox (badness 10000) has occurred while \output is active [243] [244] [245] [246] Underfull \vbox (badness 10000) has occurred while \output is active [247] Underfull \vbox (badness 10000) has occurred while \output is active [248] [249] [250]) (./namespacecoord__zlike.tex [251] [252] [253] [254]) (./namespacedense__water__initialization.tex [255] [256] Underfull \vbox (badness 10000) has occurred while \output is active [257] Underfull \vbox (badness 10000) has occurred while \output is active [258] [259] [260]) (./namespacedome2d__initialization.tex [261] [262] Underfull \vbox (badness 10000) has occurred while \output is active [263] [264] Underfull \vbox (badness 10000) has occurred while \output is active [265] Overfull \vbox (16.8857pt too high) has occurred while \output is active [266] [267] Overfull \vbox (11.34378pt too high) has occurred while \output is active [268]) (./namespacedome__initialization.tex [269] [270] [271] [272] [273] [274] Underfull \vbox (badness 10000) has occurred while \output is active [275]) (./namespacedome__tracer.tex [276] [277] [278] [279] [280] [281] Underfull \vbox (badness 10000) has occurred while \output is active [282] [283]) (./namespacedumbbell__initialization.tex [284] Underfull \vbox (badness 10000) has occurred while \output is active [285] [286] Underfull \vbox (badness 10000) has occurred while \output is active [287] [288] [289] [290]) (./namespacedumbbell__surface__forcing.tex [291] Overfull \vbox (36.78252pt too high) has occurred while \output is active [292] [293] [294] [295]) (./namespacedyed__channel__initialization.tex [296] [297] [298] [299] [300]) (./namespacedyed__obc__tracer.tex [301] [302] [303] [304] [305] [306] [307]) (./namespacedyed__obcs__initialization.tex [308] [309]) (./namespaceexternal__gwave__initialization.tex [310]) (./namespaceg__tracer__utils.tex [311] [312] [313] Overfull \vbox (37.85315pt too high) has occurred while \output is active [314] [315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325]) (./namespacegeneric__tracer.tex [326] [327] [328] [329] [330] [331] [332] [333]) (./namespaceideal__age__example.tex [334] [335] Underfull \hbox (badness 10000) detected at line 99 [][][] [336] [337] [338] [339] Underfull \vbox (badness 10000) has occurred while \output is active [340] [341] [342] Underfull \vbox (badness 10000) has occurred while \output is active [343]) (./namespaceidealized__hurricane.tex [344] [345] Underfull \vbox (badness 10000) has occurred while \output is active [346] [347] [348] [349] Underfull \vbox (badness 10000) has occurred while \output is active [350] [351] Underfull \vbox (badness 10000) has occurred while \output is active [352] Underfull \vbox (badness 10000) has occurred while \output is active [353]) (./namespaceisomip__initialization.tex Overfull \hbox (53.15218pt too wide) in paragraph at lines 8--8 []\T1/phv/m/n/10 See this pa-per for details[]: [][]\T1/pcr/m/n/10 http[]://www .[]geosci-model-dev-discuss.[]net/8/9859/2015/gmdd-8-9859-2015.[] [354] [355] Underfull \vbox (badness 10000) has occurred while \output is active [356] Underfull \vbox (badness 10000) has occurred while \output is active [357] [358] [359] Underfull \vbox (badness 10000) has occurred while \output is active [360] [361] [362] [363] [364]) (./namespaceisomip__tracer.tex [365] [366] Underfull \vbox (badness 10000) has occurred while \output is active [367] [368] [369] [370] [371]) (./namespacekdtree.tex [372]) (./namespacekelvin__initialization.tex [373] [374] [375] Underfull \vbox (badness 10000) has occurred while \output is active [376] Underfull \vbox (badness 10000) has occurred while \output is active [377] [378]) (./namespacelock__exchange__initialization.tex [379] [380]) (./namespacemeso__surface__forcing.tex [381] [382] Underfull \vbox (badness 10000) has occurred while \output is active [383] Underfull \vbox (badness 10000) has occurred while \output is active [384]) (./namespacemom.tex [385] Underfull \hbox (badness 10000) detected at line 10 [][][] [386] [387] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \vbox (badness 10000) has occurred while \output is active [396] Underfull \vbox (badness 10000) has occurred while \output is active [397] Underfull \vbox (badness 10000) has occurred while \output is active [398] Underfull \vbox (badness 10000) has occurred while \output is active [399] [400] [401] [402] [403] [404] Underfull \vbox (badness 10000) has occurred while \output is active [405] Underfull \vbox (badness 10000) has occurred while \output is active [406] Underfull \vbox (badness 10000) has occurred while \output is active [407] Underfull \vbox (badness 10000) has occurred while \output is active [408] Underfull \vbox (badness 10000) has occurred while \output is active [409] Underfull \vbox (badness 10000) has occurred while \output is active [410] Underfull \vbox (badness 10000) has occurred while \output is active [411] Underfull \vbox (badness 10000) has occurred while \output is active [412] Underfull \vbox (badness 10000) has occurred while \output is active [413] Underfull \vbox (badness 10000) has occurred while \output is active [414] Underfull \vbox (badness 10000) has occurred while \output is active [415] Underfull \vbox (badness 10000) has occurred while \output is active [416] Underfull \vbox (badness 10000) has occurred while \output is active [417] [418] [419] Underfull \hbox (badness 10000) detected at line 2259 [][][] [420] [421] [422] [423] [424] Underfull \vbox (badness 10000) has occurred while \output is active [425] Underfull \vbox (badness 10000) has occurred while \output is active [426] Underfull \vbox (badness 10000) has occurred while \output is active [427] Underfull \vbox (badness 10000) has occurred while \output is active [428] Underfull \vbox (badness 10000) has occurred while \output is active [429] [430] [431] Underfull \vbox (badness 10000) has occurred while \output is active [432] [433] [434] Underfull \vbox (badness 10000) has occurred while \output is active [435] [436] [437] Underfull \vbox (badness 10000) has occurred while \output is active [438] [439] Underfull \vbox (badness 10000) has occurred while \output is active [440]) (./namespacemom__ale.tex [441] [442] Underfull \vbox (badness 10000) has occurred while \output is active [443] [444] [445] [446] [447] Overfull \vbox (24.87663pt too high) has occurred while \output is active [448] [449] [450] [451] [452] [453] [454] [455] [456] Underfull \vbox (badness 10000) has occurred while \output is active [457] Underfull \hbox (badness 10000) in paragraph at lines 1065--1066 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \vbox (badness 10000) has occurred while \output is active [467] [468] [469] [470]) (./namespacemom__ale__sponge.tex [471] [472] Overfull \vbox (10.4989pt too high) has occurred while \output is active [473] [474] Underfull \vbox (badness 10000) has occurred while \output is active [475] Underfull \vbox (badness 10000) has occurred while \output is active [476] Underfull \hbox (badness 10000) detected at line 373 [][][] [477] [478] [479] Underfull \vbox (badness 10000) has occurred while \output is active [480] [481] [482] Underfull \vbox (badness 10000) has occurred while \output is active [483] [484] Underfull \vbox (badness 10000) has occurred while \output is active [485] [486] Underfull \vbox (badness 10000) has occurred while \output is active [487] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [488] Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [489] [490] Underfull \hbox (badness 10000) in paragraph at lines 1413--1414 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), target \T1/pcr/m/sl/8 p[]_[]new [491]) (./namespacemom__array__transform.tex [492] [493] [494] [495] [496] [497] Underfull \vbox (badness 10000) has occurred while \output is active [498] [499] Underfull \vbox (badness 10000) has occurred while \output is active [500] [501] [502]) (./namespacemom__barotropic.tex [503] [504] [505] [506] Overfull \vbox (56.21756pt too high) has occurred while \output is active [507] [508] [509] [510] Underfull \vbox (badness 10000) has occurred while \output is active [511] Underfull \vbox (badness 10000) has occurred while \output is active [512] [513] [514] Underfull \vbox (badness 10000) has occurred while \output is active [515] [516] Underfull \vbox (badness 10000) has occurred while \output is active [517] Underfull \vbox (badness 10000) has occurred while \output is active [518] Underfull \vbox (badness 10000) has occurred while \output is active [519] Underfull \vbox (badness 10000) has occurred while \output is active [520] Underfull \vbox (badness 10000) has occurred while \output is active [521] Underfull \vbox (badness 10000) has occurred while \output is active [522] Underfull \vbox (badness 10000) has occurred while \output is active [523] [524] [525] [526] [527] Underfull \vbox (badness 10000) has occurred while \output is active [528] Underfull \vbox (badness 10000) has occurred while \output is active [529] Underfull \vbox (badness 10000) has occurred while \output is active [530] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] [531] [532] [533] Underfull \vbox (badness 10000) has occurred while \output is active [534] Underfull \vbox (badness 10000) has occurred while \output is active [535] Underfull \vbox (badness 10000) has occurred while \output is active [536] Underfull \vbox (badness 10000) has occurred while \output is active [537] Underfull \vbox (badness 10000) has occurred while \output is active [538] Underfull \vbox (badness 10000) has occurred while \output is active [539] Underfull \vbox (badness 10000) has occurred while \output is active [540] Underfull \vbox (badness 10000) has occurred while \output is active [541] Underfull \vbox (badness 10000) has occurred while \output is active [542] Underfull \vbox (badness 10000) has occurred while \output is active [543] Underfull \vbox (badness 10000) has occurred while \output is active [544] Underfull \vbox (badness 10000) has occurred while \output is active [545] Underfull \vbox (badness 10000) has occurred while \output is active [546] Underfull \vbox (badness 10000) has occurred while \output is active [547] Underfull \vbox (badness 10000) has occurred while \output is active [548] Underfull \vbox (badness 10000) has occurred while \output is active [549] Underfull \vbox (badness 10000) has occurred while \output is active [550] Underfull \vbox (badness 10000) has occurred while \output is active [551] Underfull \vbox (badness 10000) has occurred while \output is active [552] Underfull \vbox (badness 10000) has occurred while \output is active [553] Underfull \vbox (badness 10000) has occurred while \output is active [554] Underfull \vbox (badness 10000) has occurred while \output is active [555] Underfull \vbox (badness 10000) has occurred while \output is active [556] Underfull \vbox (badness 10000) has occurred while \output is active [557] Underfull \vbox (badness 10000) has occurred while \output is active [558] Underfull \vbox (badness 10000) has occurred while \output is active [559] Underfull \vbox (badness 10000) has occurred while \output is active [560] [561] Underfull \hbox (badness 10000) detected at line 4343 [][][] [562] Underfull \hbox (badness 10000) detected at line 4390 [][][] [563] [564] [565] Underfull \hbox (badness 10000) detected at line 4569 [][][] [566] Underfull \hbox (badness 10000) detected at line 4618 [][][] [567] [568] [569] Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]u[]_[]type[][]), dimension( ms %isdw-1[]: ms %iedw, ms %jsdw[]: ms %jedw), Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]v[]_[]type[][]), dimension( ms %isdw[]: ms %iedw, ms %jsdw-1[]: ms %jedw), [570] [571] Underfull \vbox (badness 10000) has occurred while \output is active [572] Underfull \hbox (badness 10000) in paragraph at lines 5077--5078 | \T1/pcr/m/n/8 type([][]local[]_[]bt[]_[]cont[]_[]v[]_[]type[][]), dimension( sziw[]_[](ms),szjbw[]_[](ms)), intent(in) \T1/pcr/m/sl/8 B[]T[]C[]L[]_[]v \T1/p cr/m/n/8 ) [573] [574] Underfull \vbox (badness 10000) has occurred while \output is active [575] Underfull \vbox (badness 10000) has occurred while \output is active [576] [577] Underfull \hbox (badness 10000) detected at line 5375 [][][] [578] Underfull \hbox (badness 10000) detected at line 5507 [][][] [579] Underfull \vbox (badness 10000) has occurred while \output is active [580]) (./namespacemom__bkgnd__mixing.tex [581] Overfull \vbox (4.83084pt too high) has occurred while \output is active [582] [583] Underfull \vbox (badness 10000) has occurred while \output is active [584] [585] [586] Underfull \vbox (badness 10000) has occurred while \output is active [587] [588]) (./namespacemom__boundary__update.tex [589] [590] [591] [592]) (./namespacemom__bulk__mixed__layer.tex [593] [594] [595] [596] Underfull \vbox (badness 10000) has occurred while \output is active [597] Underfull \vbox (badness 10000) has occurred while \output is active [598] Underfull \vbox (badness 10000) has occurred while \output is active [599] Underfull \vbox (badness 10000) has occurred while \output is active [600] Underfull \vbox (badness 10000) has occurred while \output is active [601] Underfull \vbox (badness 10000) has occurred while \output is active [602] Underfull \vbox (badness 10000) has occurred while \output is active [603] [604] Underfull \vbox (badness 10000) has occurred while \output is active [605] Underfull \vbox (badness 10000) has occurred while \output is active [606] Underfull \vbox (badness 10000) has occurred while \output is active [607] [608] [609] Underfull \vbox (badness 10000) has occurred while \output is active [610] Underfull \hbox (badness 10000) detected at line 1278 [][][] [611] [612] [613] Underfull \vbox (badness 10000) has occurred while \output is active [614] [615] [616] [617] Underfull \vbox (badness 10000) has occurred while \output is active [618] Underfull \vbox (badness 10000) has occurred while \output is active [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] Underfull \vbox (badness 10000) has occurred while \output is active [624] Underfull \vbox (badness 10000) has occurred while \output is active [625] Underfull \vbox (badness 10000) has occurred while \output is active [626] Underfull \vbox (badness 10000) has occurred while \output is active [627] [628] [629] Underfull \vbox (badness 10000) has occurred while \output is active [630] Underfull \vbox (badness 10000) has occurred while \output is active [631] Underfull \vbox (badness 10000) has occurred while \output is active [632] [633] [634] Underfull \vbox (badness 10000) has occurred while \output is active [635] Underfull \vbox (badness 10000) has occurred while \output is active [636] Underfull \vbox (badness 10000) has occurred while \output is active [637] Underfull \vbox (badness 10000) has occurred while \output is active [638] Underfull \vbox (badness 10000) has occurred while \output is active [639] Underfull \vbox (badness 10000) has occurred while \output is active [640] Underfull \vbox (badness 10000) has occurred while \output is active [641] Underfull \vbox (badness 10000) has occurred while \output is active [642] Underfull \vbox (badness 10000) has occurred while \output is active [643] Underfull \vbox (badness 10000) has occurred while \output is active [644] [645] [646] Underfull \vbox (badness 10000) has occurred while \output is active [647] Underfull \vbox (badness 10000) has occurred while \output is active [648] Underfull \vbox (badness 10000) has occurred while \output is active [649] [650]) (./namespacemom__checksum__packages.tex [651] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 u[] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 v[] [652] [653] [654] [655] Underfull \vbox (badness 10000) has occurred while \output is active [656] [657] [658] [659]) (./namespacemom__checksums.tex [660] [661] [662] [663] [664] Underfull \vbox (badness 10000) has occurred while \output is active [665] [666] Overfull \vbox (6.56526pt too high) has occurred while \output is active [667] [668] [669] [670] Overfull \vbox (36.94623pt too high) has occurred while \output is active [671] [672] Underfull \vbox (badness 10000) has occurred while \output is active [673] [674] Underfull \vbox (badness 10000) has occurred while \output is active [675] [676] [677] Underfull \vbox (badness 10000) has occurred while \output is active [678] [679] [680] Underfull \vbox (badness 10000) has occurred while \output is active [681] [682] [683] [684] [685] [686] [687] [688] Underfull \vbox (badness 10000) has occurred while \output is active [689] [690] Underfull \vbox (badness 10000) has occurred while \output is active [691] Underfull \vbox (badness 10000) has occurred while \output is active [692] [693] [694] [695] [696] Underfull \vbox (badness 10000) has occurred while \output is active [697] [698] [699] Underfull \vbox (badness 10000) has occurred while \output is active [700] [701] [702] [703] [704]) (./namespacemom__coms.tex [705] [706] [707] [708] [709] Underfull \hbox (badness 10000) detected at line 265 [][][] [710] Underfull \hbox (badness 10000) detected at line 301 [][][] Underfull \hbox (badness 10000) detected at line 342 [][][] [711] [712] [713] [714] Overfull \vbox (6.82013pt too high) has occurred while \output is active [715] [716] [717] Underfull \hbox (badness 10000) detected at line 788 [][][] [718] Underfull \vbox (badness 10000) has occurred while \output is active [719] [720] Underfull \hbox (badness 10000) detected at line 950 [][][] [721] [722] Underfull \hbox (badness 10000) detected at line 1090 [][][] [723] Underfull \vbox (badness 10000) has occurred while \output is active [724]) (./namespacemom__constants.tex) (./namespacemom__continuity.tex [725] Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [726] Overfull \vbox (5.65964pt too high) has occurred while \output is active [727] [728] [729] Underfull \hbox (badness 10000) detected at line 277 [][][] ) (./namespacemom__continuity__ppm.tex [730] [731] Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [732] [733] Underfull \vbox (badness 10000) has occurred while \output is active [734] [735] [736] [737] Underfull \hbox (badness 10000) detected at line 426 [][][] [738] [739] [740] [741] [742] [743] [744] Underfull \vbox (badness 10000) has occurred while \output is active [745] Underfull \hbox (badness 10000) in paragraph at lines 950--951 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional [746] [747] Underfull \vbox (badness 10000) has occurred while \output is active [748] Underfull \vbox (badness 10000) has occurred while \output is active [749] Underfull \vbox (badness 10000) has occurred while \output is active [750] [751] [752] [753] [754] Underfull \vbox (badness 10000) has occurred while \output is active [755] Underfull \vbox (badness 10000) has occurred while \output is active [756] [757] [758] Underfull \hbox (badness 10000) detected at line 1804 [][][] [759] [760] Underfull \vbox (badness 10000) has occurred while \output is active [761] [762] [763] Underfull \vbox (badness 10000) has occurred while \output is active [764] Underfull \hbox (badness 10000) in paragraph at lines 2258--2259 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional [765] [766] Underfull \hbox (badness 10000) in paragraph at lines 2406--2407 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), optional [767] [768] [769] Underfull \vbox (badness 10000) has occurred while \output is active [770] [771] [772] Underfull \hbox (badness 10000) in paragraph at lines 2756--2757 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional [773] [774] Underfull \vbox (badness 10000) has occurred while \output is active [775] Underfull \vbox (badness 10000) has occurred while \output is active [776] Underfull \vbox (badness 10000) has occurred while \output is active [777]) (./namespacemom__controlled__forcing.tex [778] Overfull \vbox (29.87068pt too high) has occurred while \output is active [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [781] Underfull \vbox (badness 10000) has occurred while \output is active [782] [783] [784] [785] Underfull \hbox (badness 10000) detected at line 537 [][][] Underfull \hbox (badness 10000) detected at line 574 [][][] [786] [787]) (./namespacemom__coord__initialization.tex [788] [789] [790] [791] [792] [793] [794] [795] Overfull \vbox (43.5485pt too high) has occurred while \output is active [796] [797] [798] Underfull \vbox (badness 10000) has occurred while \output is active [799]) (./namespacemom__coriolisadv.tex [800] [801] [802] [803] Underfull \vbox (badness 10000) has occurred while \output is active [804] Underfull \vbox (badness 10000) has occurred while \output is active [805] Underfull \vbox (badness 10000) has occurred while \output is active [806] Underfull \vbox (badness 10000) has occurred while \output is active [807] Underfull \vbox (badness 10000) has occurred while \output is active [808] Underfull \vbox (badness 10000) has occurred while \output is active [809] Underfull \vbox (badness 10000) has occurred while \output is active [810] Underfull \vbox (badness 10000) has occurred while \output is active [811] Underfull \vbox (badness 10000) has occurred while \output is active [812] [813] [814] Underfull \vbox (badness 10000) has occurred while \output is active [815] Underfull \vbox (badness 10000) has occurred while \output is active [816] Overfull \vbox (28.26488pt too high) has occurred while \output is active [817] [818]) (./namespacemom__cpu__clock.tex Underfull \hbox (badness 10000) detected at line 33 [][][] [819]) (./namespacemom__cvmix__conv.tex [820] [821] [822] [823] Underfull \vbox (badness 10000) has occurred while \output is active [824]) (./namespacemom__cvmix__ddiff.tex [825] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional Overfull \vbox (77.46162pt too high) has occurred while \output is active [826] [827] Underfull \vbox (badness 10000) has occurred while \output is active [828] [829] [830] [831]) (./namespacemom__cvmix__kpp.tex [832] [833] [834] Underfull \vbox (badness 10000) has occurred while \output is active [835] Underfull \vbox (badness 10000) has occurred while \output is active [836] Underfull \vbox (badness 10000) has occurred while \output is active [837] [838] [839] Underfull \vbox (badness 10000) has occurred while \output is active [840] Underfull \vbox (badness 10000) has occurred while \output is active [841] Underfull \vbox (badness 10000) has occurred while \output is active [842] Underfull \vbox (badness 10000) has occurred while \output is active [843] [844] [845] [846] Underfull \vbox (badness 10000) has occurred while \output is active [847] Underfull \vbox (badness 10000) has occurred while \output is active [848] Underfull \vbox (badness 10000) has occurred while \output is active [849] Underfull \vbox (badness 10000) has occurred while \output is active [850] Underfull \hbox (badness 10000) in paragraph at lines 1420--1421 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] Overfull \vbox (40.83766pt too high) has occurred while \output is active [851] Underfull \hbox (badness 10000) in paragraph at lines 1515--1516 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] [852] [853] [854]) (./namespacemom__cvmix__shear.tex [855] Overfull \vbox (65.14655pt too high) has occurred while \output is active [856] [857] [858] Underfull \hbox (badness 10000) detected at line 254 [][][] Underfull \vbox (badness 10000) has occurred while \output is active [859] [860]) (./namespacemom__debugging.tex [861] [862] [863] Overfull \vbox (14.49733pt too high) has occurred while \output is active [864] [865] [866] [867] [868] [869] [870] Overfull \vbox (0.46025pt too high) has occurred while \output is active [871] Underfull \vbox (badness 10000) has occurred while \output is active [872] [873] [874] [875] Underfull \vbox (badness 10000) has occurred while \output is active [876] [877] [878] [879] [880] [881] [882] Underfull \hbox (badness 10000) detected at line 1393 [][][] [883]) (./namespacemom__density__integrals.tex [884] [885] [886] [887] [888] [889] Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [890] [891] Underfull \vbox (badness 10000) has occurred while \output is active [892] Underfull \vbox (badness 10000) has occurred while \output is active [893] [894] [895] Underfull \vbox (badness 10000) has occurred while \output is active [896] Underfull \vbox (badness 10000) has occurred while \output is active [897] Underfull \vbox (badness 10000) has occurred while \output is active [898] Underfull \vbox (badness 10000) has occurred while \output is active [899] Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [900] [901] Underfull \vbox (badness 10000) has occurred while \output is active [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] Underfull \vbox (badness 10000) has occurred while \output is active [904] Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [905] [906] Underfull \vbox (badness 10000) has occurred while \output is active [907] Underfull \vbox (badness 10000) has occurred while \output is active [908] Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [909] [910] Underfull \vbox (badness 10000) has occurred while \output is active [911] Underfull \vbox (badness 10000) has occurred while \output is active [912] [913] [914]) (./namespacemom__diabatic__aux.tex [915] [916] [917] [918] [919] Underfull \vbox (badness 10000) has occurred while \output is active [920] Underfull \vbox (badness 10000) has occurred while \output is active [921] Underfull \vbox (badness 10000) has occurred while \output is active [922] Underfull \vbox (badness 10000) has occurred while \output is active [923] Underfull \vbox (badness 10000) has occurred while \output is active [924] Underfull \vbox (badness 10000) has occurred while \output is active [925] [926] [927] Underfull \vbox (badness 10000) has occurred while \output is active [928] Overfull \vbox (26.02458pt too high) has occurred while \output is active [929] [930] [931] [932] Underfull \vbox (badness 10000) has occurred while \output is active [933] [934] [935] [936] [937] [938] [939] [940] [941] [942]) (./namespacemom__diabatic__driver.tex [943] [944] [945] Overfull \vbox (14.49553pt too high) has occurred while \output is active [946] [947] [948] Underfull \vbox (badness 10000) has occurred while \output is active [949] [950] [951] Underfull \vbox (badness 10000) has occurred while \output is active [952] Underfull \vbox (badness 10000) has occurred while \output is active [953] Underfull \vbox (badness 10000) has occurred while \output is active [954] Underfull \vbox (badness 10000) has occurred while \output is active [955] Underfull \vbox (badness 10000) has occurred while \output is active [956] Underfull \vbox (badness 10000) has occurred while \output is active [957] Underfull \vbox (badness 10000) has occurred while \output is active [958] Underfull \vbox (badness 10000) has occurred while \output is active [959] [960] [961] Underfull \vbox (badness 10000) has occurred while \output is active [962] Underfull \vbox (badness 10000) has occurred while \output is active [963] Underfull \vbox (badness 10000) has occurred while \output is active [964] Underfull \vbox (badness 10000) has occurred while \output is active [965] Underfull \vbox (badness 10000) has occurred while \output is active [966] Underfull \vbox (badness 10000) has occurred while \output is active [967] Underfull \vbox (badness 10000) has occurred while \output is active [968] Underfull \vbox (badness 10000) has occurred while \output is active [969] [970] [971] [972] Underfull \vbox (badness 10000) has occurred while \output is active [973] Underfull \vbox (badness 10000) has occurred while \output is active [974] Underfull \vbox (badness 10000) has occurred while \output is active [975] Underfull \vbox (badness 10000) has occurred while \output is active [976] Underfull \vbox (badness 10000) has occurred while \output is active [977] Underfull \vbox (badness 10000) has occurred while \output is active [978] [979] [980] [981] [982] Overfull \vbox (4.22563pt too high) has occurred while \output is active [983] [984] [985] [986] Underfull \vbox (badness 10000) has occurred while \output is active [987] Underfull \vbox (badness 10000) has occurred while \output is active [988] Underfull \vbox (badness 10000) has occurred while \output is active [989] Underfull \vbox (badness 10000) has occurred while \output is active [990] Underfull \vbox (badness 10000) has occurred while \output is active [991] Underfull \vbox (badness 10000) has occurred while \output is active [992] Underfull \vbox (badness 10000) has occurred while \output is active [993] Underfull \vbox (badness 10000) has occurred while \output is active [994] Underfull \vbox (badness 10000) has occurred while \output is active [995] Underfull \vbox (badness 10000) has occurred while \output is active [996] Underfull \vbox (badness 10000) has occurred while \output is active [997]) (./namespacemom__diag__manager__wrapper.tex [998] Underfull \hbox (badness 2626) in paragraph at lines 18--19 []\T1/phv/m/n/10 integer func-tion [][]register[]_[]diag[]_[]field[]_[]scalar[] _[]fms[][] (module[]_[]name, field[]_[]name, init[]_[]time, long[]_[]name, unit s, [999] [1000] [1001]) (./namespacemom__diag__mediator.tex [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] [1010] Underfull \vbox (badness 10000) has occurred while \output is active [1011] [1012] [1013] [1014] [1015] Underfull \vbox (badness 10000) has occurred while \output is active [1016] [1017] [1018] [1019] [1020] Overfull \vbox (19.73378pt too high) has occurred while \output is active [1021] [1022] [1023] Underfull \vbox (badness 10000) has occurred while \output is active [1024] [1025] Underfull \vbox (badness 10000) has occurred while \output is active [1026] Underfull \vbox (badness 10000) has occurred while \output is active [1027] [1028] [1029] Underfull \hbox (badness 10000) detected at line 1799 [][][] [1030] [1031] Underfull \vbox (badness 10000) has occurred while \output is active [1032] [1033] [1034] [1035] [1036] [1037] [1038] Underfull \vbox (badness 10000) has occurred while \output is active [1039] [1040] Overfull \hbox (36.1684pt too wide) in paragraph at lines 2562--2562 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [1041] Underfull \vbox (badness 10000) has occurred while \output is active [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) detected at line 3012 [][][] [1048] Overfull \vbox (7.75447pt too high) has occurred while \output is active [1049] [1050] Underfull \hbox (badness 10000) detected at line 3181 [][][] [1051] [1052] [1053] [1054] [1055] [1056] Underfull \vbox (badness 10000) has occurred while \output is active [1057] [1058] Underfull \vbox (badness 10000) has occurred while \output is active [1059] [1060] Underfull \vbox (badness 10000) has occurred while \output is active [1061] Overfull \vbox (24.95552pt too high) has occurred while \output is active [1062] Overfull \vbox (24.2831pt too high) has occurred while \output is active [1063] [1064] [1065] [1066] Underfull \vbox (badness 10000) has occurred while \output is active [1067] Underfull \vbox (badness 10000) has occurred while \output is active [1068] Overfull \vbox (10.18648pt too high) has occurred while \output is active [1069] [1070] [1071] [1072] Underfull \vbox (badness 10000) has occurred while \output is active [1073] [1074] Underfull \hbox (badness 10000) detected at line 4862 [][][] [1075] Underfull \vbox (badness 10000) has occurred while \output is active [1076] Underfull \hbox (badness 10000) detected at line 5014 [][][] [1077] [1078] Underfull \vbox (badness 10000) has occurred while \output is active [1079] [1080] Underfull \vbox (badness 10000) has occurred while \output is active [1081] Underfull \vbox (badness 10000) has occurred while \output is active [1082] [1083] [1084] Underfull \vbox (badness 10000) has occurred while \output is active [1085] [1086] [1087] [1088]) (./namespacemom__diag__remap.tex [1089] [1090] Overfull \vbox (15.70502pt too high) has occurred while \output is active [1091] Underfull \vbox (badness 10000) has occurred while \output is active [1092] [1093] [1094] Underfull \vbox (badness 10000) has occurred while \output is active [1095] Overfull \vbox (2.68217pt too high) has occurred while \output is active [1096] [1097] Underfull \hbox (badness 10000) detected at line 533 [][][] Overfull \vbox (57.59293pt too high) has occurred while \output is active [1098] [1099] [1100] Underfull \vbox (badness 10000) has occurred while \output is active [1101] Overfull \vbox (13.8649pt too high) has occurred while \output is active [1102] [1103] [1104]) (./namespacemom__diag__vkernels.tex [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112]) (./namespacemom__diagnostics.tex [1113] [1114] [1115] [1116] Underfull \vbox (badness 10000) has occurred while \output is active [1117] Underfull \vbox (badness 10000) has occurred while \output is active [1118] Underfull \vbox (badness 10000) has occurred while \output is active [1119] Underfull \vbox (badness 10000) has occurred while \output is active [1120] Underfull \vbox (badness 10000) has occurred while \output is active [1121] Underfull \vbox (badness 10000) has occurred while \output is active [1122] Underfull \vbox (badness 10000) has occurred while \output is active [1123] [1124] Underfull \vbox (badness 10000) has occurred while \output is active [1125] [1126] [1127] [1128] [1129] [1130] [1131] Underfull \vbox (badness 10000) has occurred while \output is active [1132] Underfull \vbox (badness 10000) has occurred while \output is active [1133] Underfull \vbox (badness 10000) has occurred while \output is active [1134] Underfull \vbox (badness 10000) has occurred while \output is active [1135] [1136] Overfull \vbox (29.00815pt too high) has occurred while \output is active [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] Underfull \vbox (badness 10000) has occurred while \output is active [1147] Underfull \vbox (badness 10000) has occurred while \output is active [1148]) (./namespacemom__diapyc__energy__req.tex [1149] [1150] Underfull \vbox (badness 10000) has occurred while \output is active [1151] Underfull \vbox (badness 10000) has occurred while \output is active [1152] Underfull \vbox (badness 10000) has occurred while \output is active [1153] Underfull \vbox (badness 10000) has occurred while \output is active [1154] Underfull \vbox (badness 10000) has occurred while \output is active [1155] Underfull \vbox (badness 10000) has occurred while \output is active [1156] Underfull \vbox (badness 10000) has occurred while \output is active [1157] Underfull \vbox (badness 10000) has occurred while \output is active [1158] Underfull \vbox (badness 10000) has occurred while \output is active [1159] Underfull \vbox (badness 10000) has occurred while \output is active [1160] [1161] [1162] [1163] [1164] [1165] [1166] Underfull \vbox (badness 10000) has occurred while \output is active [1167] [1168] Underfull \vbox (badness 10000) has occurred while \output is active [1169] [1170]) (./namespacemom__document.tex [1171] [1172] [1173] Underfull \vbox (badness 10000) has occurred while \output is active [1174] [1175] [1176] [1177] [1178] Overfull \vbox (57.30919pt too high) has occurred while \output is active [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] Underfull \hbox (badness 10000) detected at line 1389 [][][] [1193] [1194] [1195] [1196] [1197] Underfull \vbox (badness 10000) has occurred while \output is active [1198]) (./namespacemom__domains.tex [1199] [1200] [1201] [1202] [1203] Underfull \vbox (badness 10000) has occurred while \output is active [1204] [1205] [1206] Overfull \vbox (1.22655pt too high) has occurred while \output is active [1207] [1208] [1209] [1210] [1211] [1212] [1213] [1214] [1215] [1216] [1217] [1218] [1219] [1220] Underfull \vbox (badness 10000) has occurred while \output is active [1221] Underfull \vbox (badness 10000) has occurred while \output is active [1222] Underfull \vbox (badness 10000) has occurred while \output is active [1223] Underfull \vbox (badness 10000) has occurred while \output is active [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] Underfull \hbox (badness 10000) detected at line 2078 [][][] [1232] Underfull \hbox (badness 10000) detected at line 2155 [][][] [1233] [1234] [1235] [1236] [1237] [1238] [1239] Underfull \hbox (badness 10000) detected at line 2578 [][][] [1240] [1241] Underfull \hbox (badness 10000) detected at line 2668 [][][] [1242]) (./namespacemom__dyn__horgrid.tex [1243] Underfull \hbox (badness 10000) detected at line 42 [][][] [1244] [1245] [1246] [1247] [1248]) (./namespacemom__dynamics__split__rk2.tex [1249] Underfull \vbox (badness 10000) has occurred while \output is active [1250] Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), target Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(inout), target [1251] [1252] [1253] Underfull \vbox (badness 10000) has occurred while \output is active [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] Underfull \vbox (badness 10000) has occurred while \output is active [1257] Underfull \vbox (badness 10000) has occurred while \output is active [1258] [1259] [1260] [1261] Underfull \vbox (badness 10000) has occurred while \output is active [1262] Underfull \vbox (badness 10000) has occurred while \output is active [1263] Underfull \vbox (badness 10000) has occurred while \output is active [1264] Underfull \vbox (badness 10000) has occurred while \output is active [1265] Underfull \vbox (badness 10000) has occurred while \output is active [1266] Underfull \vbox (badness 10000) has occurred while \output is active [1267] Underfull \vbox (badness 10000) has occurred while \output is active [1268] Underfull \vbox (badness 10000) has occurred while \output is active [1269]) (./namespacemom__dynamics__unsplit.tex [1270] [1271] [1272] [1273] Underfull \vbox (badness 10000) has occurred while \output is active [1274] [1275] [1276] [1277] [1278] Underfull \vbox (badness 10000) has occurred while \output is active [1279] Underfull \vbox (badness 10000) has occurred while \output is active [1280] Underfull \vbox (badness 10000) has occurred while \output is active [1281]) (./namespacemom__dynamics__unsplit__rk2.tex [1282] [1283] [1284] [1285] Underfull \vbox (badness 10000) has occurred while \output is active [1286] Overfull \vbox (34.51509pt too high) has occurred while \output is active [1287] [1288] [1289] Underfull \vbox (badness 10000) has occurred while \output is active [1290] Underfull \vbox (badness 10000) has occurred while \output is active [1291] Underfull \vbox (badness 10000) has occurred while \output is active [1292]) (./namespaceMOM__energetic__PBL.tex) (./namespacemom__energetic__pbl.tex [1293] [1294] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] [1295] [1296] Underfull \vbox (badness 10000) has occurred while \output is active [1297] Underfull \vbox (badness 10000) has occurred while \output is active [1298] Underfull \vbox (badness 10000) has occurred while \output is active [1299] [1300] [1301] [1302] Underfull \vbox (badness 10000) has occurred while \output is active [1303] Underfull \vbox (badness 10000) has occurred while \output is active [1304] Underfull \vbox (badness 10000) has occurred while \output is active [1305] Underfull \vbox (badness 10000) has occurred while \output is active [1306] Underfull \vbox (badness 10000) has occurred while \output is active [1307] [1308] [1309] Underfull \vbox (badness 10000) has occurred while \output is active [1310] Underfull \vbox (badness 10000) has occurred while \output is active [1311] Underfull \vbox (badness 10000) has occurred while \output is active [1312] Underfull \vbox (badness 10000) has occurred while \output is active [1313] Underfull \vbox (badness 10000) has occurred while \output is active [1314] Underfull \vbox (badness 10000) has occurred while \output is active [1315] Underfull \vbox (badness 10000) has occurred while \output is active [1316] Underfull \vbox (badness 10000) has occurred while \output is active [1317] Underfull \vbox (badness 10000) has occurred while \output is active [1318] Underfull \vbox (badness 10000) has occurred while \output is active [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] Underfull \vbox (badness 10000) has occurred while \output is active [1322] [1323] [1324] Underfull \vbox (badness 10000) has occurred while \output is active [1325] [1326] [1327] [1328] Underfull \vbox (badness 10000) has occurred while \output is active [1329] [1330] [1331] [1332] [1333]) (./namespacemom__entrain__diffusive.tex [1334] [1335] Underfull \vbox (badness 10000) has occurred while \output is active [1336] [1337] Underfull \vbox (badness 10000) has occurred while \output is active [1338] [1339] [1340] [1341] Underfull \vbox (badness 10000) has occurred while \output is active [1342] [1343] [1344] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 integer, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), inten t(inout), optional \T1/pcr/m/sl/8 kb[]_[] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 Kd[]_[][] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in), optional [1345] [1346] Underfull \vbox (badness 10000) has occurred while \output is active [1347] Underfull \vbox (badness 10000) has occurred while \output is active [1348] Underfull \vbox (badness 10000) has occurred while \output is active [1349] Underfull \vbox (badness 10000) has occurred while \output is active [1350] Underfull \vbox (badness 10000) has occurred while \output is active [1351] Underfull \vbox (badness 10000) has occurred while \output is active [1352] Underfull \vbox (badness 10000) has occurred while \output is active [1353] Underfull \vbox (badness 10000) has occurred while \output is active [1354] Underfull \vbox (badness 10000) has occurred while \output is active [1355] Underfull \vbox (badness 10000) has occurred while \output is active [1356] [1357] Underfull \vbox (badness 10000) has occurred while \output is active [1358] [1359] [1360] [1361] [1362] Underfull \vbox (badness 10000) has occurred while \output is active [1363] Underfull \vbox (badness 10000) has occurred while \output is active [1364] Underfull \vbox (badness 10000) has occurred while \output is active [1365] [1366] [1367] Underfull \vbox (badness 10000) has occurred while \output is active [1368]) (./namespacemom__eos.tex [1369] [1370] [1371] [1372] Underfull \vbox (badness 10000) has occurred while \output is active [1373] [1374] [1375] [1376] [1377] [1378] [1379] Overfull \vbox (21.86925pt too high) has occurred while \output is active [1380] [1381] Overfull \vbox (45.78584pt too high) has occurred while \output is active [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] [1395] [1396] [1397] [1398] [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 10000) detected at line 2146 [][][] [1404] [1405] [1406] [1407] [1408] Underfull \hbox (badness 10000) detected at line 2431 [][][] Overfull \vbox (47.24054pt too high) has occurred while \output is active [1409] Underfull \vbox (badness 10000) has occurred while \output is active [1410]) (./namespacemom__eos__linear.tex [1411] [1412] Overfull \vbox (1.44406pt too high) has occurred while \output is active [1413] Underfull \vbox (badness 10000) has occurred while \output is active [1414] Underfull \vbox (badness 10000) has occurred while \output is active [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] Underfull \vbox (badness 10000) has occurred while \output is active [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [1428]) (./namespacemom__eos__nemo.tex [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./namespacemom__eos__teos10.tex [1441] [1442] [1443] [1444] [1445] [1446] Overfull \vbox (69.66199pt too high) has occurred while \output is active [1447] Underfull \vbox (badness 10000) has occurred while \output is active [1448] [1449] [1450]) (./namespacemom__eos__unesco.tex [1451] [1452] [1453] [1454] [1455] [1456] [1457] Overfull \vbox (42.16423pt too high) has occurred while \output is active [1458] [1459] Overfull \vbox (6.26321pt too high) has occurred while \output is active [1460]) (./namespacemom__eos__wright.tex [1461] [1462] Overfull \vbox (34.43738pt too high) has occurred while \output is active [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] Underfull \vbox (badness 10000) has occurred while \output is active [1475] [1476] [1477] Underfull \vbox (badness 10000) has occurred while \output is active [1478] Underfull \vbox (badness 10000) has occurred while \output is active [1479]) (./namespacemom__error__handler.tex [1480] [1481] [1482] [1483] [1484] [1485]) (./namespacemom__file__parser.tex [1486] [1487] Underfull \hbox (badness 2065) in paragraph at lines 82--83 []\T1/phv/m/n/10 subroutine [][]log[]_[]param[]_[]int[]_[]array[][] (CS, mod-u- le-name, var-name, value, desc, units, de-fault, layout[]Param, [1488] [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 10000) detected at line 398 [][][] [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] Underfull \vbox (badness 10000) has occurred while \output is active [1508] Underfull \vbox (badness 10000) has occurred while \output is active [1509] Underfull \vbox (badness 10000) has occurred while \output is active [1510] [1511] Overfull \vbox (31.06355pt too high) has occurred while \output is active [1512] [1513] [1514] [1515] [1516] [1517] [1518] [1519] Underfull \vbox (badness 10000) has occurred while \output is active [1520] [1521] Underfull \vbox (badness 10000) has occurred while \output is active [1522] [1523] [1524] [1525] [1526] [1527] [1528] [1529] [1530] [1531] Overfull \vbox (16.03447pt too high) has occurred while \output is active [1532] [1533] [1534] [1535] Underfull \vbox (badness 10000) has occurred while \output is active [1536] [1537] [1538]) (./namespacemom__fixed__initialization.tex [1539] [1540] [1541] [1542]) (./namespacemom__forcing__type.tex [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(inout) \T1/pcr/m/sl/8 buoyancy[] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 net[]Heat[] [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] Underfull \vbox (badness 10000) has occurred while \output is active [1560] Underfull \vbox (badness 10000) has occurred while \output is active [1561] Underfull \vbox (badness 10000) has occurred while \output is active [1562] Underfull \vbox (badness 10000) has occurred while \output is active [1563] Underfull \vbox (badness 10000) has occurred while \output is active [1564] [1565] [1566] [1567] [1568] Underfull \vbox (badness 10000) has occurred while \output is active [1569] [1570] [1571] Underfull \vbox (badness 10000) has occurred while \output is active [1572] Underfull \vbox (badness 10000) has occurred while \output is active [1573] Underfull \vbox (badness 10000) has occurred while \output is active [1574] Underfull \vbox (badness 10000) has occurred while \output is active [1575] Underfull \vbox (badness 10000) has occurred while \output is active [1576] Underfull \vbox (badness 10000) has occurred while \output is active [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] Underfull \vbox (badness 10000) has occurred while \output is active [1589] Underfull \vbox (badness 10000) has occurred while \output is active [1590] Underfull \vbox (badness 10000) has occurred while \output is active [1591] Underfull \vbox (badness 10000) has occurred while \output is active [1592] Underfull \vbox (badness 10000) has occurred while \output is active [1593] Underfull \vbox (badness 10000) has occurred while \output is active [1594] Underfull \vbox (badness 10000) has occurred while \output is active [1595] [1596] [1597] [1598] [1599] [1600]) (./namespacemom__full__convection.tex [1601] [1602] Underfull \vbox (badness 10000) has occurred while \output is active [1603] Underfull \vbox (badness 10000) has occurred while \output is active [1604] [1605] Underfull \hbox (badness 10000) detected at line 362 [][][] [1606] Overfull \vbox (25.10631pt too high) has occurred while \output is active [1607] [1608]) (./namespacemom__generic__tracer.tex [1609] [1610] [1611] Underfull \vbox (badness 10000) has occurred while \output is active [1612] [1613] [1614] [1615] Underfull \vbox (badness 10000) has occurred while \output is active [1616] [1617] [1618] Underfull \hbox (badness 10000) detected at line 648 [][][] [1619] Overfull \vbox (42.70247pt too high) has occurred while \output is active [1620] Underfull \hbox (badness 10000) detected at line 763 [][][] [1621] [1622] [1623] Underfull \vbox (badness 10000) has occurred while \output is active [1624]) (./namespacemom__geothermal.tex [1625] Underfull \vbox (badness 10000) has occurred while \output is active [1626] [1627] Underfull \vbox (badness 10000) has occurred while \output is active [1628] Underfull \vbox (badness 10000) has occurred while \output is active [1629] [1630] [1631] Underfull \vbox (badness 10000) has occurred while \output is active [1632] [1633] Underfull \vbox (badness 10000) has occurred while \output is active [1634]) (./namespacemom__get__input.tex [1635] [1636]) (./namespacemom__grid.tex [1637] [1638] Underfull \hbox (badness 10000) detected at line 70 [][][] [1639] [1640] [1641] [1642] [1643] Underfull \vbox (badness 10000) has occurred while \output is active [1644] [1645] [1646]) (./namespacemom__grid__initialize.tex [1647] [1648] Underfull \hbox (badness 10000) detected at line 72 [][][] [1649] Overfull \vbox (10.33813pt too high) has occurred while \output is active [1650] [1651] [1652] [1653] Underfull \hbox (badness 10000) detected at line 347 [][][] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] Underfull \vbox (badness 10000) has occurred while \output is active [1665] Underfull \vbox (badness 10000) has occurred while \output is active [1666] [1667] Underfull \vbox (badness 10000) has occurred while \output is active [1668] Underfull \vbox (badness 10000) has occurred while \output is active [1669] [1670] Underfull \vbox (badness 10000) has occurred while \output is active [1671]) (./namespacemom__hor__index.tex [1672] [1673] [1674]) (./namespacemom__hor__visc.tex [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] Underfull \vbox (badness 10000) has occurred while \output is active [1683] Underfull \vbox (badness 10000) has occurred while \output is active [1684] Underfull \vbox (badness 10000) has occurred while \output is active [1685] Underfull \vbox (badness 10000) has occurred while \output is active [1686] Underfull \vbox (badness 10000) has occurred while \output is active [1687] Underfull \vbox (badness 10000) has occurred while \output is active [1688] Underfull \vbox (badness 10000) has occurred while \output is active [1689] Underfull \vbox (badness 10000) has occurred while \output is active [1690] [1691] [1692] Underfull \vbox (badness 10000) has occurred while \output is active [1693] Underfull \vbox (badness 10000) has occurred while \output is active [1694] Underfull \vbox (badness 10000) has occurred while \output is active [1695] Underfull \vbox (badness 10000) has occurred while \output is active [1696] Underfull \vbox (badness 10000) has occurred while \output is active [1697] Underfull \vbox (badness 10000) has occurred while \output is active [1698] Underfull \vbox (badness 10000) has occurred while \output is active [1699] Underfull \vbox (badness 10000) has occurred while \output is active [1700] Underfull \vbox (badness 10000) has occurred while \output is active [1701] Underfull \vbox (badness 10000) has occurred while \output is active [1702] Underfull \vbox (badness 10000) has occurred while \output is active [1703] Underfull \vbox (badness 10000) has occurred while \output is active [1704] Underfull \vbox (badness 10000) has occurred while \output is active [1705] Underfull \vbox (badness 10000) has occurred while \output is active [1706] [1707] [1708]) (./namespacemom__horizontal__regridding.tex [1709] Underfull \hbox (badness 10000) in paragraph at lines 79--80 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [1710] [1711] [1712] Underfull \vbox (badness 10000) has occurred while \output is active [1713] [1714] [1715] Underfull \vbox (badness 10000) has occurred while \output is active [1716] Underfull \vbox (badness 10000) has occurred while \output is active [1717] Underfull \vbox (badness 10000) has occurred while \output is active [1718] [1719] [1720] Underfull \vbox (badness 10000) has occurred while \output is active [1721] Underfull \vbox (badness 10000) has occurred while \output is active [1722] Underfull \vbox (badness 10000) has occurred while \output is active [1723] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 x[] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 y[] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] [1724] Overfull \vbox (13.0991pt too high) has occurred while \output is active [1725] Overfull \vbox (52.21524pt too high) has occurred while \output is active [1726]) (./namespacemom__ice__shelf.tex [1727] [1728] [1729] [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] Underfull \vbox (badness 10000) has occurred while \output is active [1739] Underfull \vbox (badness 10000) has occurred while \output is active [1740] Underfull \vbox (badness 10000) has occurred while \output is active [1741] Underfull \vbox (badness 10000) has occurred while \output is active [1742] Underfull \vbox (badness 10000) has occurred while \output is active [1743] Underfull \vbox (badness 10000) has occurred while \output is active [1744] [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Underfull \vbox (badness 10000) has occurred while \output is active [1749] Underfull \vbox (badness 10000) has occurred while \output is active [1750] Underfull \vbox (badness 10000) has occurred while \output is active [1751] Underfull \vbox (badness 10000) has occurred while \output is active [1752] [1753] [1754] [1755]) (./namespacemom__ice__shelf__dynamics.tex [1756] [1757] [1758] Underfull \vbox (badness 10000) has occurred while \output is active [1759] [1760] [1761] [1762] [1763] [1764] Underfull \vbox (badness 10000) has occurred while \output is active [1765] Underfull \vbox (badness 10000) has occurred while \output is active [1766] [1767] [1768] [1769] [1770] Underfull \vbox (badness 10000) has occurred while \output is active [1771] [1772] [1773] [1774] [1775] [1776] Underfull \vbox (badness 10000) has occurred while \output is active [1777] Overfull \vbox (13.57463pt too high) has occurred while \output is active [1778] [1779] [1780] [1781] Overfull \vbox (35.12973pt too high) has occurred while \output is active [1782] [1783] Overfull \vbox (30.19351pt too high) has occurred while \output is active [1784] [1785] [1786] Underfull \vbox (badness 10000) has occurred while \output is active [1787] Underfull \vbox (badness 10000) has occurred while \output is active [1788] Underfull \vbox (badness 10000) has occurred while \output is active [1789] [1790] Underfull \vbox (badness 10000) has occurred while \output is active [1791] Underfull \vbox (badness 10000) has occurred while \output is active [1792] Overfull \vbox (1.09367pt too high) has occurred while \output is active [1793] [1794] Underfull \hbox (badness 10000) detected at line 2775 [][][] [1795] [1796] [1797] [1798] Underfull \vbox (badness 10000) has occurred while \output is active [1799] Underfull \vbox (badness 10000) has occurred while \output is active [1800] Underfull \vbox (badness 10000) has occurred while \output is active [1801] Underfull \vbox (badness 10000) has occurred while \output is active [1802] [1803] [1804] [1805] [1806] Overfull \vbox (22.12805pt too high) has occurred while \output is active [1807] [1808] Underfull \vbox (badness 10000) has occurred while \output is active [1809] [1810] [1811] [1812] [1813] [1814] Underfull \vbox (badness 10000) has occurred while \output is active [1815]) (./namespacemom__ice__shelf__initialize.tex [1816] [1817] [1818] [1819] [1820]) (./namespacemom__ice__shelf__state.tex [1821]) (./namespacemom__int__tide__input.tex [1822] [1823] [1824] [1825] [1826] Underfull \vbox (badness 10000) has occurred while \output is active [1827] [1828] [1829]) (./namespacemom__interface__heights.tex [1830] [1831] Underfull \vbox (badness 10000) has occurred while \output is active [1832] [1833] Underfull \vbox (badness 10000) has occurred while \output is active [1834]) (./namespacemom__internal__tides.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [1835] Overfull \vbox (36.89885pt too high) has occurred while \output is active [1836] [1837] [1838] [1839] Underfull \vbox (badness 10000) has occurred while \output is active [1840] Underfull \vbox (badness 10000) has occurred while \output is active [1841] Underfull \vbox (badness 10000) has occurred while \output is active [1842] Underfull \vbox (badness 10000) has occurred while \output is active [1843] Underfull \vbox (badness 10000) has occurred while \output is active [1844] Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(inout) Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(out) \T1/pcr/m/sl/8 T[] [1845] [1846] [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \vbox (badness 10000) has occurred while \output is active [1857] Underfull \vbox (badness 10000) has occurred while \output is active [1858] Underfull \vbox (badness 10000) has occurred while \output is active [1859] [1860] Underfull \vbox (badness 10000) has occurred while \output is active [1861] Underfull \vbox (badness 10000) has occurred while \output is active [1862] Underfull \vbox (badness 10000) has occurred while \output is active [1863] Underfull \vbox (badness 10000) has occurred while \output is active [1864] Underfull \vbox (badness 10000) has occurred while \output is active [1865] Overfull \vbox (21.70555pt too high) has occurred while \output is active [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876]) (./namespacemom__intrinsic__functions.tex [1877]) (./namespacemom__io.tex [1878] [1879] [1880] Underfull \hbox (badness 10000) detected at line 94 [][][] Overfull \vbox (81.31973pt too high) has occurred while \output is active [1881] [1882] Underfull \vbox (badness 10000) has occurred while \output is active [1883] Underfull \vbox (badness 10000) has occurred while \output is active [1884] Underfull \hbox (badness 10000) detected at line 426 [][][] [1885] [1886] [1887] [1888] [1889] [1890] [1891] [1892] [1893] [1894] Underfull \hbox (badness 10000) detected at line 1056 [][][] [1895] Underfull \vbox (badness 10000) has occurred while \output is active [1896] [1897] [1898] [1899] Underfull \vbox (badness 10000) has occurred while \output is active [1900] [1901] [1902] Underfull \hbox (badness 10000) detected at line 1523 [][][] ) (./namespacemom__isopycnal__slopes.tex [1903] Overfull \vbox (20.40102pt too high) has occurred while \output is active [1904] [1905] Underfull \vbox (badness 10000) has occurred while \output is active [1906] Underfull \vbox (badness 10000) has occurred while \output is active [1907] Underfull \vbox (badness 10000) has occurred while \output is active [1908] [1909] [1910]) (./namespacemom__kappa__shear.tex [1911] [1912] [1913] [1914] Underfull \vbox (badness 10000) has occurred while \output is active [1915] Underfull \vbox (badness 10000) has occurred while \output is active [1916] [1917] [1918] Underfull \vbox (badness 10000) has occurred while \output is active [1919] Underfull \vbox (badness 10000) has occurred while \output is active [1920] [1921] [1922] Underfull \vbox (badness 10000) has occurred while \output is active [1923] [1924] [1925] Underfull \vbox (badness 10000) has occurred while \output is active [1926] Underfull \vbox (badness 10000) has occurred while \output is active [1927] Underfull \vbox (badness 10000) has occurred while \output is active [1928] Underfull \vbox (badness 10000) has occurred while \output is active [1929] Underfull \vbox (badness 10000) has occurred while \output is active [1930] Underfull \vbox (badness 10000) has occurred while \output is active [1931] [1932] [1933] [1934] Underfull \vbox (badness 10000) has occurred while \output is active [1935] Underfull \vbox (badness 10000) has occurred while \output is active [1936] Underfull \vbox (badness 10000) has occurred while \output is active [1937] Underfull \vbox (badness 10000) has occurred while \output is active [1938] [1939] Underfull \hbox (badness 10000) detected at line 2018 [][][] [1940] Underfull \vbox (badness 10000) has occurred while \output is active [1941] [1942]) (./namespacemom__lateral__boundary__diffusion.tex [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] Underfull \vbox (badness 10000) has occurred while \output is active [1951] Underfull \vbox (badness 10000) has occurred while \output is active [1952] [1953] [1954] Underfull \vbox (badness 10000) has occurred while \output is active [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] Underfull \vbox (badness 10000) has occurred while \output is active [1959] [1960] [1961] Underfull \vbox (badness 10000) has occurred while \output is active [1962] Underfull \vbox (badness 10000) has occurred while \output is active [1963] Underfull \vbox (badness 10000) has occurred while \output is active [1964] Underfull \vbox (badness 10000) has occurred while \output is active [1965] [1966]) (./namespacemom__lateral__mixing__coeffs.tex [1967] [1968] [1969] [1970] [1971] Underfull \vbox (badness 10000) has occurred while \output is active [1972] [1973] Underfull \vbox (badness 10000) has occurred while \output is active [1974] Underfull \vbox (badness 10000) has occurred while \output is active [1975] [1976] [1977] [1978] Underfull \vbox (badness 10000) has occurred while \output is active [1979] [1980] [1981] Underfull \vbox (badness 10000) has occurred while \output is active [1982] [1983] [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] Underfull \vbox (badness 10000) has occurred while \output is active [1986] Underfull \vbox (badness 10000) has occurred while \output is active [1987] Underfull \vbox (badness 10000) has occurred while \output is active [1988]) (./namespacemom__marine__ice.tex [1989] [1990] [1991] Overfull \vbox (43.3866pt too high) has occurred while \output is active [1992]) (./namespacemom__meke.tex [1993] [1994] [1995] [1996] [1997] [1998] [1999] [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] [2002] [2003] [2004] Underfull \vbox (badness 10000) has occurred while \output is active [2005] Underfull \vbox (badness 10000) has occurred while \output is active [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] Underfull \vbox (badness 10000) has occurred while \output is active [2013] Underfull \vbox (badness 10000) has occurred while \output is active [2014] Underfull \vbox (badness 10000) has occurred while \output is active [2015] Underfull \vbox (badness 10000) has occurred while \output is active [2016] Underfull \vbox (badness 10000) has occurred while \output is active [2017] Underfull \vbox (badness 10000) has occurred while \output is active [2018]) (./namespacemom__mixed__layer__restrat.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. [2019] [2020] [2021] [2022] Underfull \vbox (badness 10000) has occurred while \output is active [2023] [2024] Underfull \vbox (badness 10000) has occurred while \output is active [2025] [2026] [2027] Underfull \vbox (badness 10000) has occurred while \output is active [2028] Underfull \vbox (badness 10000) has occurred while \output is active [2029] Underfull \vbox (badness 10000) has occurred while \output is active [2030] Underfull \vbox (badness 10000) has occurred while \output is active [2031] Underfull \vbox (badness 10000) has occurred while \output is active [2032] [2033] Underfull \vbox (badness 10000) has occurred while \output is active [2034] [2035]) (./namespacemom__neutral__diffusion.tex [2036] [2037] Overfull \hbox (120.57199pt too wide) in paragraph at lines 53--53 []\T1/phv/m/sl/9 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/9 ^^A\OML/cmm/m/it/9 ^^Z \OT1/cmr/m/n/9 = [] []$\T1/phv/m /sl/9 . [2038] Underfull \hbox (badness 10000) detected at line 122 [][][] [2039] Underfull \hbox (badness 10000) detected at line 170 [][][] [2040] [2041] [2042] Overfull \hbox (132.78908pt too wide) in paragraph at lines 352--353 []\T1/phv/m/n/10 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/10 ^^A\OML/cmm/m/it/10 ^^Z \OT1/cmr/m/n/10 = [] []$\T1/ph v/m/n/10 . [2043] Underfull \hbox (badness 10000) detected at line 432 [][][] [2044] Underfull \vbox (badness 10000) has occurred while \output is active [2045] [2046] Underfull \hbox (badness 10000) detected at line 573 [][][] [2047] [2048] [2049] Underfull \vbox (badness 10000) has occurred while \output is active [2050] Underfull \vbox (badness 10000) has occurred while \output is active [2051] [2052] [2053] Underfull \vbox (badness 10000) has occurred while \output is active [2054] Underfull \vbox (badness 10000) has occurred while \output is active [2055] Underfull \vbox (badness 10000) has occurred while \output is active [2056] [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \vbox (badness 10000) has occurred while \output is active [2064] Underfull \vbox (badness 10000) has occurred while \output is active [2065] Underfull \vbox (badness 10000) has occurred while \output is active [2066] [2067] Underfull \vbox (badness 10000) has occurred while \output is active [2068] Underfull \vbox (badness 10000) has occurred while \output is active [2069] [2070] [2071] Underfull \vbox (badness 10000) has occurred while \output is active [2072] [2073] [2074] [2075] Underfull \vbox (badness 10000) has occurred while \output is active [2076] Underfull \vbox (badness 10000) has occurred while \output is active [2077] [2078] [2079] Underfull \vbox (badness 10000) has occurred while \output is active [2080] [2081] [2082] Underfull \vbox (badness 10000) has occurred while \output is active [2083] [2084] [2085] [2086] [2087] [2088] [2089] [2090] [2091] [2092] [2093] [2094] [2095] [2096] [2097] [2098] [2099] [2100]) (./namespacemom__obsolete__diagnostics.tex [2101] [2102]) (./namespacemom__obsolete__params.tex [2103] [2104] [2105] [2106] [2107]) (./namespacemom__ocmip2__cfc.tex [2108] [2109] [2110] [2111] [2112] Overfull \vbox (4.64684pt too high) has occurred while \output is active [2113] [2114] [2115] Underfull \hbox (badness 10000) detected at line 445 [][][] [2116] [2117] [2118] Underfull \vbox (badness 10000) has occurred while \output is active [2119] Underfull \vbox (badness 10000) has occurred while \output is active [2120]) (./namespaceMOM__oda__driver__mod.tex) (./namespacemom__oda__driver__mod.tex [2121] [2122] [2123] [2124] [2125] Underfull \vbox (badness 10000) has occurred while \output is active [2126] Underfull \vbox (badness 10000) has occurred while \output is active [2127] [2128] [2129] Overfull \vbox (67.32932pt too high) has occurred while \output is active [2130]) (./namespacemom__offline__aux.tex [2131] Overfull \vbox (15.37663pt too high) has occurred while \output is active [2132] [2133] [2134] [2135] [2136] [2137] Overfull \vbox (5.58195pt too high) has occurred while \output is active [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \vbox (badness 10000) has occurred while \output is active [2148]) (./namespacemom__offline__main.tex [2149] [2150] [2151] [2152] Overfull \vbox (11.18053pt too high) has occurred while \output is active [2153] Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isdb[]: cs%g %iedb, cs%g %jsd[]: cs%g % jed, cs%g %ke), intent(inout) Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isd[]: cs%g %ied, cs%g %jsdb[]: cs%g %j edb, cs%g %ke), intent(inout) [2154] [2155] Underfull \vbox (badness 10000) has occurred while \output is active [2156] [2157] [2158] Underfull \vbox (badness 10000) has occurred while \output is active [2159] [2160] [2161] [2162] [2163] [2164] [2165] Underfull \vbox (badness 10000) has occurred while \output is active [2166] [2167] [2168] Underfull \vbox (badness 10000) has occurred while \output is active [2169] Underfull \vbox (badness 10000) has occurred while \output is active [2170] [2171] [2172] [2173] [2174] [2175]) (./namespacemom__opacity.tex [2176] [2177] [2178] [2179] Underfull \vbox (badness 10000) has occurred while \output is active [2180] Underfull \vbox (badness 10000) has occurred while \output is active [2181] Underfull \vbox (badness 10000) has occurred while \output is active [2182] Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied, gv %ke ), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied), inten t(out), optional \T1/pcr/m/sl/8 pen[]S[]W[] [2183] [2184] Underfull \hbox (badness 10000) in paragraph at lines 548--549 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional Overfull \vbox (50.97925pt too high) has occurred while \output is active [2185] [2186] Underfull \vbox (badness 10000) has occurred while \output is active [2187] [2188] Underfull \vbox (badness 10000) has occurred while \output is active [2189] Underfull \vbox (badness 10000) has occurred while \output is active [2190] Underfull \hbox (badness 10000) detected at line 1009 [][][] [2191] Underfull \hbox (badness 10000) detected at line 1039 [][][] Underfull \hbox (badness 10000) detected at line 1079 [][][] Underfull \hbox (badness 10000) in paragraph at lines 1098--1099 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional [2192] [2193] Underfull \vbox (badness 10000) has occurred while \output is active [2194] [2195] [2196] [2197] Underfull \hbox (badness 10000) detected at line 1460 [][][] ) (./namespacemom__open__boundary.tex [2198] [2199] [2200] Underfull \hbox (badness 862) in paragraph at lines 120--121 []\T1/phv/m/n/10 subroutine, pub-lic [][]open[]_[]boundary[]_[]register[]_[]res tarts[][] (HI, GV, O[]BC, Reg, param[]_[]file, restart[]_[][]C[]Sp, use[]_[] [2201] Underfull \hbox (badness 10000) detected at line 187 [][][] [2202] Underfull \vbox (badness 10000) has occurred while \output is active [2203] [2204] [2205] Underfull \vbox (badness 10000) has occurred while \output is active [2206] [2207] [2208] [2209] [2210] [2211] Underfull \vbox (badness 10000) has occurred while \output is active [2212] [2213] [2214] Underfull \vbox (badness 10000) has occurred while \output is active [2215] Underfull \vbox (badness 10000) has occurred while \output is active [2216] Underfull \vbox (badness 10000) has occurred while \output is active [2217] [2218] [2219] Underfull \vbox (badness 10000) has occurred while \output is active [2220] [2221] Overfull \vbox (39.93549pt too high) has occurred while \output is active [2222] [2223] Underfull \vbox (badness 10000) has occurred while \output is active [2224] Underfull \vbox (badness 10000) has occurred while \output is active [2225] [2226] [2227] [2228] [2229] Underfull \vbox (badness 10000) has occurred while \output is active [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \vbox (badness 10000) has occurred while \output is active [2241] [2242] Underfull \vbox (badness 10000) has occurred while \output is active [2243] [2244] Underfull \vbox (badness 10000) has occurred while \output is active [2245] Underfull \vbox (badness 10000) has occurred while \output is active [2246] Underfull \vbox (badness 10000) has occurred while \output is active [2247] Underfull \vbox (badness 10000) has occurred while \output is active [2248] Underfull \vbox (badness 10000) has occurred while \output is active [2249] Underfull \vbox (badness 10000) has occurred while \output is active [2250] Underfull \vbox (badness 10000) has occurred while \output is active [2251] Underfull \vbox (badness 10000) has occurred while \output is active [2252] Underfull \vbox (badness 10000) has occurred while \output is active [2253] Underfull \vbox (badness 10000) has occurred while \output is active [2254] Underfull \vbox (badness 10000) has occurred while \output is active [2255] Underfull \vbox (badness 10000) has occurred while \output is active [2256] Underfull \vbox (badness 10000) has occurred while \output is active [2257] [2258] [2259] [2260] [2261] [2262] [2263] Overfull \vbox (46.04994pt too high) has occurred while \output is active [2264] [2265] [2266] [2267] [2268] [2269] [2270] Underfull \vbox (badness 10000) has occurred while \output is active [2271] [2272] Underfull \vbox (badness 10000) has occurred while \output is active [2273] Overfull \vbox (6.87355pt too high) has occurred while \output is active [2274] [2275] [2276] [2277] [2278] Underfull \vbox (badness 10000) has occurred while \output is active [2279] Underfull \vbox (badness 10000) has occurred while \output is active [2280] Underfull \vbox (badness 10000) has occurred while \output is active [2281] Underfull \vbox (badness 10000) has occurred while \output is active [2282] Underfull \vbox (badness 10000) has occurred while \output is active [2283] Underfull \vbox (badness 10000) has occurred while \output is active [2284] Underfull \vbox (badness 10000) has occurred while \output is active [2285] [2286] [2287]) (./namespacemom__pointaccel.tex [2288] [2289] Underfull \hbox (badness 10000) in paragraph at lines 118--119 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv [2290] [2291] Underfull \vbox (badness 10000) has occurred while \output is active [2292] Underfull \vbox (badness 10000) has occurred while \output is active [2293] Underfull \vbox (badness 10000) has occurred while \output is active [2294] Underfull \hbox (badness 10000) in paragraph at lines 497--498 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv [2295] [2296] Underfull \vbox (badness 10000) has occurred while \output is active [2297] Underfull \vbox (badness 10000) has occurred while \output is active [2298] Underfull \vbox (badness 10000) has occurred while \output is active [2299]) (./namespacemom__pressureforce.tex Underfull \hbox (badness 10000) in paragraph at lines 29--30 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [2300] [2301] [2302]) (./namespacemom__pressureforce__fv.tex [2303] [2304] [2305] Underfull \vbox (badness 10000) has occurred while \output is active [2306] Underfull \vbox (badness 10000) has occurred while \output is active [2307] Underfull \vbox (badness 10000) has occurred while \output is active [2308] Underfull \vbox (badness 10000) has occurred while \output is active [2309] [2310] [2311] [2312] [2313] Underfull \vbox (badness 10000) has occurred while \output is active [2314] Underfull \vbox (badness 10000) has occurred while \output is active [2315] Underfull \vbox (badness 10000) has occurred while \output is active [2316]) (./namespacemom__pressureforce__mont.tex [2317] [2318] [2319] Underfull \vbox (badness 10000) has occurred while \output is active [2320] Underfull \vbox (badness 10000) has occurred while \output is active [2321] [2322] [2323] [2324] [2325] Underfull \vbox (badness 10000) has occurred while \output is active [2326] Underfull \vbox (badness 10000) has occurred while \output is active [2327] Underfull \vbox (badness 10000) has occurred while \output is active [2328] [2329] [2330] [2331] [2332]) (./namespacemom__random.tex [2333] [2334] [2335] [2336] [2337] [2338] Underfull \vbox (badness 10000) has occurred while \output is active [2339] [2340] Underfull \vbox (badness 10000) has occurred while \output is active [2341] [2342] [2343]) (./namespacemom__regridding.tex [2344] [2345] Underfull \hbox (badness 1173) in paragraph at lines 78--79 \T1/phv/m/n/10 _[]scheme, depth[]_[]of[]_[]time[]_[]filter[]_[]shallow, depth[] _[]of[]_[]time[]_[]filter[]_[]deep, compress[]_[]fraction, ref[]_[]pressure, dz []_[] Underfull \hbox (badness 1661) in paragraph at lines 78--79 \T1/phv/m/n/10 min[]_[]surface, nz[]_[]fixed[]_[]surface, Rho[]_[][]M[]L[]_[]av g[]_[]depth, nlay[]_[][]M[]L[]_[]to[]_[]interior, fix[]_[]haloclines, halocline []_[]filt[]_[]len, [2346] [2347] Underfull \hbox (badness 10000) in paragraph at lines 202--203 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [2348] [2349] [2350] Underfull \vbox (badness 10000) has occurred while \output is active [2351] Underfull \hbox (badness 10000) detected at line 425 [][][] [2352] [2353] [2354] Underfull \hbox (badness 10000) in paragraph at lines 627--628 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [2355] Underfull \vbox (badness 10000) has occurred while \output is active [2356] [2357] [2358] [2359] Overfull \hbox (20.61044pt too wide) in paragraph at lines 1007--1008 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed,cs%nk), in tent(inout) \T1/pcr/m/sl/8 h[]_[]new \T1/pcr/m/n/8 ) [private] [2360] Overfull \vbox (26.79585pt too high) has occurred while \output is active [2361] [2362] [2363] Overfull \vbox (35.17787pt too high) has occurred while \output is active [2364] [2365] [2366] [2367] Underfull \vbox (badness 10000) has occurred while \output is active [2368] [2369] [2370] Underfull \hbox (badness 10000) detected at line 1728 [][][] [2371] [2372] [2373] Underfull \hbox (badness 10000) detected at line 1925 [][][] [2374] [2375] [2376] [2377] Underfull \vbox (badness 10000) has occurred while \output is active [2378] Underfull \vbox (badness 10000) has occurred while \output is active [2379] Underfull \vbox (badness 10000) has occurred while \output is active [2380] Underfull \vbox (badness 10000) has occurred while \output is active [2381] Underfull \vbox (badness 10000) has occurred while \output is active [2382] Underfull \vbox (badness 10000) has occurred while \output is active [2383] [2384] Underfull \vbox (badness 10000) has occurred while \output is active [2385] [2386] [2387] [2388] [2389] Underfull \vbox (badness 10000) has occurred while \output is active [2390] [2391] [2392] Underfull \hbox (badness 10000) detected at line 3307 [][][] [2393]) (./namespacemom__regularize__layers.tex [2394] [2395] Underfull \vbox (badness 10000) has occurred while \output is active [2396] [2397] [2398] [2399] [2400] [2401] Underfull \vbox (badness 10000) has occurred while \output is active [2402] Underfull \vbox (badness 10000) has occurred while \output is active [2403] Underfull \vbox (badness 10000) has occurred while \output is active [2404] Underfull \vbox (badness 10000) has occurred while \output is active [2405] Underfull \vbox (badness 10000) has occurred while \output is active [2406]) (./namespacemom__remapping.tex [2407] Underfull \hbox (badness 6893) in paragraph at lines 14--15 []\T1/phv/m/n/10 subroutine, pub-lic [][]remapping[]_[]set[]_[]param[][] (CS, r emapping[]_[]scheme, boundary[]_[]extrapolation, check[]_[] [2408] [2409] [2410] [2411] [2412] [2413] [2414] [2415] [2416] [2417] [2418] [2419] [2420] Underfull \vbox (badness 10000) has occurred while \output is active [2421] Underfull \vbox (badness 10000) has occurred while \output is active [2422] Underfull \vbox (badness 10000) has occurred while \output is active [2423] Underfull \hbox (badness 10000) detected at line 1070 [][][] Underfull \hbox (badness 10000) detected at line 1084 [][][] [2424] [2425] Underfull \vbox (badness 10000) has occurred while \output is active [2426] [2427] [2428] Underfull \vbox (badness 10000) has occurred while \output is active [2429] Underfull \vbox (badness 10000) has occurred while \output is active [2430] Underfull \vbox (badness 10000) has occurred while \output is active [2431] Underfull \vbox (badness 10000) has occurred while \output is active [2432] [2433] [2434] [2435] Overfull \vbox (25.43697pt too high) has occurred while \output is active [2436] [2437] [2438] [2439] [2440] Underfull \vbox (badness 10000) has occurred while \output is active [2441] Underfull \vbox (badness 10000) has occurred while \output is active [2442] Underfull \vbox (badness 10000) has occurred while \output is active [2443] [2444] [2445]) (./namespacemom__restart.tex [2446] [2447] [2448] Underfull \hbox (badness 10000) detected at line 130 [][][] [2449] Underfull \hbox (badness 10000) detected at line 236 [][][] [2450] Underfull \hbox (badness 10000) detected at line 285 [][][] [2451] Underfull \vbox (badness 10000) has occurred while \output is active [2452] [2453] [2454] [2455] [2456] [2457] [2458] Overfull \vbox (1.02933pt too high) has occurred while \output is active [2459] [2460] [2461] [2462] [2463] [2464] [2465] [2466] [2467] [2468] [2469] Underfull \vbox (badness 10000) has occurred while \output is active [2470] [2471] [2472] Underfull \vbox (badness 10000) has occurred while \output is active [2473] [2474] Underfull \hbox (badness 10000) detected at line 1833 [][][] Underfull \vbox (badness 10000) has occurred while \output is active [2475] [2476] Underfull \vbox (badness 10000) has occurred while \output is active [2477] [2478] Underfull \vbox (badness 10000) has occurred while \output is active [2479] [2480] [2481] Underfull \vbox (badness 10000) has occurred while \output is active [2482] Underfull \vbox (badness 10000) has occurred while \output is active [2483]) (./namespacemom__safe__alloc.tex [2484] Overfull \vbox (34.4091pt too high) has occurred while \output is active [2485] [2486] Underfull \vbox (badness 10000) has occurred while \output is active [2487] [2488] [2489]) (./namespacemom__set__diffusivity.tex [2490] [2491] [2492] Underfull \vbox (badness 10000) has occurred while \output is active [2493] Underfull \vbox (badness 10000) has occurred while \output is active [2494] [2495] [2496] Underfull \vbox (badness 10000) has occurred while \output is active [2497] [2498] [2499] Underfull \vbox (badness 10000) has occurred while \output is active [2500] [2501] [2502] [2503] [2504] Underfull \vbox (badness 10000) has occurred while \output is active [2505] [2506] [2507] Underfull \vbox (badness 10000) has occurred while \output is active [2508] [2509] [2510] Underfull \vbox (badness 10000) has occurred while \output is active [2511] [2512] [2513] [2514] [2515] Underfull \vbox (badness 10000) has occurred while \output is active [2516] Underfull \vbox (badness 10000) has occurred while \output is active [2517] Underfull \vbox (badness 10000) has occurred while \output is active [2518] Underfull \vbox (badness 10000) has occurred while \output is active [2519] Underfull \vbox (badness 10000) has occurred while \output is active [2520] Underfull \vbox (badness 10000) has occurred while \output is active [2521] [2522] [2523] Underfull \vbox (badness 10000) has occurred while \output is active [2524] Underfull \vbox (badness 10000) has occurred while \output is active [2525] Underfull \vbox (badness 10000) has occurred while \output is active [2526]) (./namespacemom__set__visc.tex [2527] Underfull \hbox (badness 10000) detected at line 64 [][][] [2528] Underfull \hbox (badness 10000) detected at line 143 [][][] [2529] [2530] Underfull \vbox (badness 10000) has occurred while \output is active [2531] [2532] Underfull \vbox (badness 10000) has occurred while \output is active [2533] Underfull \vbox (badness 10000) has occurred while \output is active [2534] Underfull \vbox (badness 10000) has occurred while \output is active [2535] [2536] [2537] [2538] [2539] Underfull \vbox (badness 10000) has occurred while \output is active [2540] Underfull \vbox (badness 10000) has occurred while \output is active [2541] Underfull \vbox (badness 10000) has occurred while \output is active [2542] Underfull \vbox (badness 10000) has occurred while \output is active [2543] Underfull \vbox (badness 10000) has occurred while \output is active [2544] Underfull \vbox (badness 10000) has occurred while \output is active [2545] Underfull \vbox (badness 10000) has occurred while \output is active [2546] Underfull \vbox (badness 10000) has occurred while \output is active [2547] Underfull \vbox (badness 10000) has occurred while \output is active [2548] Underfull \vbox (badness 10000) has occurred while \output is active [2549] Underfull \vbox (badness 10000) has occurred while \output is active [2550] Overfull \vbox (8.39467pt too high) has occurred while \output is active [2551] [2552] Underfull \vbox (badness 10000) has occurred while \output is active [2553] Underfull \vbox (badness 10000) has occurred while \output is active [2554] Underfull \vbox (badness 10000) has occurred while \output is active [2555] Underfull \vbox (badness 10000) has occurred while \output is active [2556] Underfull \vbox (badness 10000) has occurred while \output is active [2557] Underfull \vbox (badness 10000) has occurred while \output is active [2558] Underfull \vbox (badness 10000) has occurred while \output is active [2559]) (./namespacemom__shared__initialization.tex [2560] Overfull \vbox (29.7233pt too high) has occurred while \output is active [2561] [2562] [2563] Underfull \hbox (badness 10000) detected at line 255 [][][] [2564] [2565] [2566] [2567] Overfull \vbox (22.05618pt too high) has occurred while \output is active [2568] [2569] Underfull \hbox (badness 10000) detected at line 652 [][][] [2570] [2571] [2572] Underfull \vbox (badness 10000) has occurred while \output is active [2573] [2574] [2575] Underfull \vbox (badness 10000) has occurred while \output is active [2576] Underfull \vbox (badness 10000) has occurred while \output is active [2577] [2578] Underfull \vbox (badness 10000) has occurred while \output is active [2579] [2580] [2581] Underfull \vbox (badness 10000) has occurred while \output is active [2582] [2583] Underfull \vbox (badness 10000) has occurred while \output is active [2584]) (./namespacemom__spatial__means.tex [2585] [2586] [2587] Underfull \hbox (badness 10000) detected at line 125 [][][] [2588] [2589] [2590] [2591] [2592] Underfull \hbox (badness 10000) detected at line 520 [][][] [2593] [2594] Underfull \hbox (badness 10000) detected at line 595 [][][] ) (./namespacemom__sponge.tex [2595] [2596] [2597] Underfull \vbox (badness 10000) has occurred while \output is active [2598] Underfull \vbox (badness 10000) has occurred while \output is active [2599] [2600] Overfull \vbox (46.3142pt too high) has occurred while \output is active [2601] [2602] [2603] Overfull \vbox (19.83441pt too high) has occurred while \output is active [2604] [2605]) (./namespacemom__state__initialization.tex [2606] [2607] Underfull \hbox (badness 10000) detected at line 79 [][][] [2608] [2609] [2610] [2611] [2612] [2613] [2614] [2615] [2616] [2617] [2618] Underfull \vbox (badness 10000) has occurred while \output is active [2619] [2620] [2621] Overfull \vbox (6.23174pt too high) has occurred while \output is active [2622] [2623] [2624] Underfull \hbox (badness 10000) detected at line 1251 [][][] [2625] [2626] [2627] [2628] [2629] [2630] [2631] [2632] [2633] [2634] [2635] Underfull \vbox (badness 10000) has occurred while \output is active [2636] Underfull \vbox (badness 10000) has occurred while \output is active [2637] Underfull \vbox (badness 10000) has occurred while \output is active [2638] Underfull \vbox (badness 10000) has occurred while \output is active [2639] Underfull \vbox (badness 10000) has occurred while \output is active [2640] [2641] [2642] [2643] Underfull \vbox (badness 10000) has occurred while \output is active [2644] Underfull \vbox (badness 10000) has occurred while \output is active [2645] Underfull \vbox (badness 10000) has occurred while \output is active [2646] Underfull \vbox (badness 10000) has occurred while \output is active [2647] Underfull \vbox (badness 10000) has occurred while \output is active [2648] [2649] [2650] [2651]) (./namespacemom__string__functions.tex [2652] [2653] [2654] [2655] [2656] Underfull \hbox (badness 10000) detected at line 283 [][][] Underfull \hbox (badness 10000) detected at line 314 [][][] [2657] Underfull \hbox (badness 10000) detected at line 351 [][][] [2658] Underfull \hbox (badness 10000) detected at line 426 [][][] [2659] [2660] [2661] Underfull \hbox (badness 10000) detected at line 601 [][][] [2662] [2663] [2664] Underfull \hbox (badness 10000) detected at line 774 [][][] ) (./namespacemom__sum__output.tex [2665] [2666] [2667] Underfull \vbox (badness 10000) has occurred while \output is active [2668] [2669] Underfull \vbox (badness 10000) has occurred while \output is active [2670] [2671] [2672] Underfull \vbox (badness 10000) has occurred while \output is active [2673] [2674] [2675] [2676] Underfull \vbox (badness 10000) has occurred while \output is active [2677] [2678] [2679] [2680] Underfull \vbox (badness 10000) has occurred while \output is active [2681] Underfull \vbox (badness 10000) has occurred while \output is active [2682] Underfull \vbox (badness 10000) has occurred while \output is active [2683] Underfull \vbox (badness 10000) has occurred while \output is active [2684] Underfull \vbox (badness 10000) has occurred while \output is active [2685] Underfull \vbox (badness 10000) has occurred while \output is active [2686] Underfull \vbox (badness 10000) has occurred while \output is active [2687]) (./namespacemom__surface__forcing.tex [2688] [2689] [2690] [2691] Underfull \vbox (badness 10000) has occurred while \output is active [2692] [2693] [2694] Underfull \vbox (badness 10000) has occurred while \output is active [2695] Underfull \vbox (badness 10000) has occurred while \output is active [2696] [2697] [2698] [2699] [2700] [2701] [2702] [2703] [2704] Underfull \vbox (badness 10000) has occurred while \output is active [2705] [2706] [2707] Underfull \vbox (badness 10000) has occurred while \output is active [2708] Underfull \vbox (badness 10000) has occurred while \output is active [2709] Underfull \vbox (badness 10000) has occurred while \output is active [2710] Underfull \vbox (badness 10000) has occurred while \output is active [2711] Underfull \vbox (badness 10000) has occurred while \output is active [2712] [2713] [2714] [2715] Overfull \vbox (27.8983pt too high) has occurred while \output is active [2716] Overfull \vbox (14.28166pt too high) has occurred while \output is active [2717] [2718] [2719] [2720]) (./namespacemom__tfreeze.tex [2721] [2722] [2723] [2724] [2725]) (./namespacemom__thickness__diffuse.tex [2726] [2727] [2728] [2729] Underfull \vbox (badness 10000) has occurred while \output is active [2730] Underfull \vbox (badness 10000) has occurred while \output is active [2731] Underfull \vbox (badness 10000) has occurred while \output is active [2732] Underfull \vbox (badness 10000) has occurred while \output is active [2733] Underfull \vbox (badness 10000) has occurred while \output is active [2734] [2735] [2736] Underfull \vbox (badness 10000) has occurred while \output is active [2737] Underfull \vbox (badness 10000) has occurred while \output is active [2738] Underfull \vbox (badness 10000) has occurred while \output is active [2739] Underfull \vbox (badness 10000) has occurred while \output is active [2740] Underfull \vbox (badness 10000) has occurred while \output is active [2741] [2742] [2743] Underfull \vbox (badness 10000) has occurred while \output is active [2744] Underfull \vbox (badness 10000) has occurred while \output is active [2745] Underfull \vbox (badness 10000) has occurred while \output is active [2746] Underfull \vbox (badness 10000) has occurred while \output is active [2747] Underfull \vbox (badness 10000) has occurred while \output is active [2748] Underfull \vbox (badness 10000) has occurred while \output is active [2749] Underfull \vbox (badness 10000) has occurred while \output is active [2750] Underfull \vbox (badness 10000) has occurred while \output is active [2751] Underfull \vbox (badness 10000) has occurred while \output is active [2752] Underfull \vbox (badness 10000) has occurred while \output is active [2753] [2754] [2755] [2756] Underfull \vbox (badness 10000) has occurred while \output is active [2757]) (./namespacemom__tidal__forcing.tex [2758] [2759] [2760] [2761] [2762] [2763] Underfull \vbox (badness 10000) has occurred while \output is active [2764] Underfull \vbox (badness 10000) has occurred while \output is active [2765] Underfull \vbox (badness 10000) has occurred while \output is active [2766]) (./namespacemom__tidal__mixing.tex [2767] [2768] [2769] [2770] Underfull \vbox (badness 10000) has occurred while \output is active [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] Underfull \vbox (badness 10000) has occurred while \output is active [2773] Underfull \vbox (badness 10000) has occurred while \output is active [2774] Underfull \vbox (badness 10000) has occurred while \output is active [2775] [2776] Underfull \vbox (badness 10000) has occurred while \output is active [2777] Underfull \vbox (badness 10000) has occurred while \output is active [2778] [2779] [2780] [2781] Overfull \vbox (10.48775pt too high) has occurred while \output is active [2782] [2783] [2784] [2785] Underfull \vbox (badness 10000) has occurred while \output is active [2786] [2787] [2788] Underfull \vbox (badness 10000) has occurred while \output is active [2789] Underfull \vbox (badness 10000) has occurred while \output is active [2790] Underfull \vbox (badness 10000) has occurred while \output is active [2791] Underfull \vbox (badness 10000) has occurred while \output is active [2792] Underfull \vbox (badness 10000) has occurred while \output is active [2793]) (./namespacemom__time__manager.tex Underfull \hbox (badness 10000) detected at line 24 [][][] [2794]) (./namespacemom__tracer__advect.tex [2795] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 h[]_[] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional \T1/pcr/m/sl/8 h[]_[] [2796] [2797] Underfull \vbox (badness 10000) has occurred while \output is active [2798] Underfull \vbox (badness 10000) has occurred while \output is active [2799] Underfull \vbox (badness 10000) has occurred while \output is active [2800] [2801] [2802] Underfull \vbox (badness 10000) has occurred while \output is active [2803] Underfull \vbox (badness 10000) has occurred while \output is active [2804] Underfull \vbox (badness 10000) has occurred while \output is active [2805] [2806] [2807] Underfull \vbox (badness 10000) has occurred while \output is active [2808] Underfull \vbox (badness 10000) has occurred while \output is active [2809] Underfull \vbox (badness 10000) has occurred while \output is active [2810] Underfull \vbox (badness 10000) has occurred while \output is active [2811] [2812] [2813]) (./namespacemom__tracer__diabatic.tex [2814] [2815] Underfull \vbox (badness 10000) has occurred while \output is active [2816] Underfull \vbox (badness 10000) has occurred while \output is active [2817] Underfull \hbox (badness 10000) in paragraph at lines 285--286 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 btm[]_[] Overfull \vbox (1.75337pt too high) has occurred while \output is active [2818] [2819] Underfull \vbox (badness 10000) has occurred while \output is active [2820]) (./namespaceMOM__tracer__flow__control.tex) (./namespacemom__tracer__flow__control.tex [2821] [2822] [2823] Underfull \vbox (badness 10000) has occurred while \output is active [2824] [2825] [2826] [2827] [2828] [2829] [2830] Underfull \vbox (badness 10000) has occurred while \output is active [2831] [2832] [2833] [2834] [2835] [2836]) (./namespacemom__tracer__hor__diff.tex [2837] [2838] [2839] Underfull \vbox (badness 10000) has occurred while \output is active [2840] Underfull \vbox (badness 10000) has occurred while \output is active [2841] Underfull \vbox (badness 10000) has occurred while \output is active [2842] Underfull \vbox (badness 10000) has occurred while \output is active [2843] Underfull \vbox (badness 10000) has occurred while \output is active [2844] Underfull \vbox (badness 10000) has occurred while \output is active [2845] Underfull \vbox (badness 10000) has occurred while \output is active [2846] Underfull \vbox (badness 10000) has occurred while \output is active [2847] Underfull \vbox (badness 10000) has occurred while \output is active [2848] Underfull \vbox (badness 10000) has occurred while \output is active [2849] [2850] [2851] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed), intent (in), optional \T1/pcr/m/sl/8 read[]_[] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb), intent (in), optional \T1/pcr/m/sl/8 read[]_[] [2852] [2853] Underfull \vbox (badness 10000) has occurred while \output is active [2854] Underfull \vbox (badness 10000) has occurred while \output is active [2855] Underfull \vbox (badness 10000) has occurred while \output is active [2856] Underfull \vbox (badness 10000) has occurred while \output is active [2857] Underfull \vbox (badness 10000) has occurred while \output is active [2858]) (./namespacemom__tracer__initialization__from__z.tex [2859] Underfull \vbox (badness 10000) has occurred while \output is active [2860] [2861]) (./namespacemom__tracer__registry.tex Underfull \vbox (badness 10000) has occurred while \output is active [2862] [2863] Underfull \vbox (badness 10000) has occurred while \output is active [2864] [2865] [2866] [2867] [2868] [2869] [2870] [2871] Underfull \vbox (badness 10000) has occurred while \output is active [2872] [2873] [2874] Underfull \vbox (badness 10000) has occurred while \output is active [2875] Underfull \vbox (badness 10000) has occurred while \output is active [2876] Underfull \vbox (badness 10000) has occurred while \output is active [2877] [2878] [2879]) (./namespacemom__tracer__z__init.tex [2880] [2881] Underfull \vbox (badness 10000) has occurred while \output is active [2882] Underfull \hbox (badness 10000) detected at line 202 [][][] [2883] [2884] [2885] [2886] [2887] Underfull \hbox (badness 10000) detected at line 505 [][][] [2888] Underfull \vbox (badness 10000) has occurred while \output is active [2889] Underfull \vbox (badness 10000) has occurred while \output is active [2890] [2891] [2892]) (./namespacemom__transcribe__grid.tex [2893] [2894] Underfull \vbox (badness 10000) has occurred while \output is active [2895] [2896] Underfull \vbox (badness 10000) has occurred while \output is active [2897] [2898]) (./namespacemom__transform__fms.tex [2899] [2900]) (./namespacemom__unit__scaling.tex [2901] [2902] [2903]) (./namespacemom__unit__tests.tex [2904]) (./namespacemom__variables.tex [2905] [2906] [2907] [2908] [2909] [2910]) (./namespacemom__vert__friction.tex Underfull \hbox (badness 10000) detected at line 8 [][][] Underfull \hbox (badness 10000) detected at line 11 [][][] [2911] [2912] [2913] Underfull \vbox (badness 10000) has occurred while \output is active [2914] Underfull \vbox (badness 10000) has occurred while \output is active [2915] Underfull \vbox (badness 10000) has occurred while \output is active [2916] [2917] [2918] [2919] Underfull \vbox (badness 10000) has occurred while \output is active [2920] Underfull \vbox (badness 10000) has occurred while \output is active [2921] Underfull \vbox (badness 10000) has occurred while \output is active [2922] [2923] [2924] Underfull \vbox (badness 10000) has occurred while \output is active [2925] Underfull \vbox (badness 10000) has occurred while \output is active [2926] Underfull \vbox (badness 10000) has occurred while \output is active [2927] Underfull \vbox (badness 10000) has occurred while \output is active [2928] Underfull \vbox (badness 10000) has occurred while \output is active [2929] [2930] [2931] Underfull \vbox (badness 10000) has occurred while \output is active [2932] Underfull \vbox (badness 10000) has occurred while \output is active [2933] [2934] [2935] Underfull \vbox (badness 10000) has occurred while \output is active [2936] Underfull \vbox (badness 10000) has occurred while \output is active [2937] Underfull \hbox (badness 10000) in paragraph at lines 1952--1953 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, gv %ke) , intent(inout) \T1/pcr/m/sl/8 visc[]_[] [2938] Underfull \vbox (badness 10000) has occurred while \output is active [2939]) (./namespacemom__verticalgrid.tex [2940] Underfull \hbox (badness 10000) detected at line 66 [][][] Underfull \hbox (badness 10000) detected at line 102 [][][] [2941] Underfull \hbox (badness 10000) detected at line 138 [][][] [2942] [2943] [2944] [2945]) (./namespacemom__wave__interface.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [2946] [2947] [2948] Underfull \vbox (badness 10000) has occurred while \output is active [2949] Underfull \vbox (badness 10000) has occurred while \output is active [2950] [2951] [2952] [2953] [2954] [2955] [2956] [2957] [2958] Underfull \vbox (badness 10000) has occurred while \output is active [2959] Underfull \vbox (badness 10000) has occurred while \output is active [2960] [2961] [2962] [2963] Underfull \vbox (badness 10000) has occurred while \output is active [2964] [2965] Underfull \vbox (badness 10000) has occurred while \output is active [2966] Underfull \vbox (badness 10000) has occurred while \output is active [2967] [2968] [2969] [2970] [2971] [2972] [2973] [2974] [2975] [2976] [2977] [2978] [2979]) (./namespacemom__wave__speed.tex [2980] Underfull \vbox (badness 10000) has occurred while \output is active [2981] [2982] Underfull \hbox (badness 10000) in paragraph at lines 183--184 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [2983] [2984] Underfull \vbox (badness 10000) has occurred while \output is active [2985] Underfull \vbox (badness 10000) has occurred while \output is active [2986] Underfull \vbox (badness 10000) has occurred while \output is active [2987] Underfull \vbox (badness 10000) has occurred while \output is active [2988] Underfull \vbox (badness 10000) has occurred while \output is active [2989] Underfull \vbox (badness 10000) has occurred while \output is active [2990] Overfull \vbox (20.3618pt too high) has occurred while \output is active [2991] [2992] [2993] [2994] Underfull \vbox (badness 10000) has occurred while \output is active [2995] Underfull \vbox (badness 10000) has occurred while \output is active [2996] Underfull \vbox (badness 10000) has occurred while \output is active [2997] Underfull \vbox (badness 10000) has occurred while \output is active [2998] Underfull \vbox (badness 10000) has occurred while \output is active [2999]) (./namespacemom__wave__structure.tex [3000] [3001] Underfull \vbox (badness 10000) has occurred while \output is active [3002] [3003] [3004] Underfull \vbox (badness 10000) has occurred while \output is active [3005] Underfull \vbox (badness 10000) has occurred while \output is active [3006] Underfull \vbox (badness 10000) has occurred while \output is active [3007] Underfull \vbox (badness 10000) has occurred while \output is active [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] [3010]) (./namespacemom__write__cputime.tex [3011] [3012] [3013] [3014]) (./namespaceneverworld__initialization.tex [3015] [3016] [3017] Overfull \vbox (66.35884pt too high) has occurred while \output is active [3018] [3019] Overfull \vbox (59.03142pt too high) has occurred while \output is active [3020] [3021] Overfull \vbox (35.34378pt too high) has occurred while \output is active [3022] [3023] Underfull \vbox (badness 10000) has occurred while \output is active [3024] [3025]) (./namespaceocean__da__core__mod.tex Overfull \vbox (24.63379pt too high) has occurred while \output is active [3026]) (./namespaceocean__da__types__mod.tex [3027]) (./namespaceocean__model__mod.tex [3028] [3029] [3030] [3031] [3032] [3033] [3034] [3035] [3036] [3037] [3038] Underfull \vbox (badness 10000) has occurred while \output is active [3039] [3040] [3041] [3042] [3043] [3044] [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] Underfull \vbox (badness 10000) has occurred while \output is active [3047]) (./namespaceoil__tracer.tex [3048] [3049] [3050] [3051] Underfull \hbox (badness 10000) detected at line 201 [][][] [3052] [3053] Underfull \vbox (badness 10000) has occurred while \output is active [3054] [3055] Overfull \vbox (55.07356pt too high) has occurred while \output is active [3056] [3057]) (./namespacep1m__functions.tex [3058] [3059] [3060] [3061]) (./namespacep3m__functions.tex [3062] Overfull \vbox (44.4672pt too high) has occurred while \output is active [3063] [3064] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] [3065] Underfull \vbox (badness 10000) has occurred while \output is active [3066] [3067] [3068] Underfull \vbox (badness 10000) has occurred while \output is active [3069] [3070] Overfull \vbox (8.10031pt too high) has occurred while \output is active [3071] [3072]) (./namespacePCM__functions.tex) (./namespacepcm__functions.tex [3073]) (./namespacephillips__initialization.tex [3074] [3075] [3076] [3077] [3078] [3079] [3080] Underfull \hbox (badness 10000) detected at line 454 [][][] ) (./namespaceplm__functions.tex [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088]) (./namespacepolynomial__functions.tex [3089] [3090] [3091]) (./namespaceppm__functions.tex [3092] [3093] Underfull \vbox (badness 10000) has occurred while \output is active [3094] [3095] [3096] [3097] Underfull \hbox (badness 10000) detected at line 378 [][][] ) (./namespacepqm__functions.tex [3098] [3099] Underfull \vbox (badness 10000) has occurred while \output is active [3100] [3101] [3102] Underfull \vbox (badness 10000) has occurred while \output is active [3103] Underfull \vbox (badness 10000) has occurred while \output is active [3104] Underfull \vbox (badness 10000) has occurred while \output is active [3105] [3106] Underfull \vbox (badness 10000) has occurred while \output is active [3107] Underfull \vbox (badness 10000) has occurred while \output is active [3108] Underfull \vbox (badness 10000) has occurred while \output is active [3109] [3110]) (./namespacepseudo__salt__tracer.tex [3111] Overfull \vbox (50.21103pt too high) has occurred while \output is active [3112] [3113] Underfull \hbox (badness 10000) detected at line 157 [][][] [3114] [3115] [3116] [3117] [3118]) (./namespaceregional__dyes.tex [3119] Underfull \hbox (badness 10000) detected at line 60 [][][] [3120] [3121] [3122] [3123] [3124] [3125] [3126] Underfull \vbox (badness 10000) has occurred while \output is active [3127]) (./namespaceregrid__consts.tex [3128] Underfull \hbox (badness 10000) detected at line 102 [][][] [3129] Underfull \hbox (badness 10000) detected at line 143 [][][] [3130] Underfull \hbox (badness 10000) detected at line 182 [][][] [3131]) (./namespaceregrid__edge__values.tex [3132] [3133] [3134] [3135] [3136] [3137] Underfull \vbox (badness 10000) has occurred while \output is active [3138] [3139] Underfull \vbox (badness 10000) has occurred while \output is active [3140] Underfull \vbox (badness 10000) has occurred while \output is active [3141] [3142] [3143] [3144] Underfull \vbox (badness 10000) has occurred while \output is active [3145] Underfull \vbox (badness 10000) has occurred while \output is active [3146] [3147] Underfull \vbox (badness 10000) has occurred while \output is active [3148] Underfull \vbox (badness 10000) has occurred while \output is active [3149] [3150] Underfull \vbox (badness 10000) has occurred while \output is active [3151] [3152] Underfull \vbox (badness 10000) has occurred while \output is active [3153] [3154] [3155] [3156] [3157]) (./namespaceregrid__interp.tex [3158] [3159] [3160] [3161] Underfull \hbox (badness 10000) detected at line 197 [][][] [3162] Underfull \vbox (badness 10000) has occurred while \output is active [3163] [3164] [3165] [3166] Underfull \vbox (badness 10000) has occurred while \output is active [3167] Underfull \vbox (badness 10000) has occurred while \output is active [3168] [3169]) (./namespaceregrid__solvers.tex [3170] [3171] [3172] [3173] Underfull \vbox (badness 10000) has occurred while \output is active [3174] [3175]) (./namespacergc__tracer.tex [3176] [3177] Underfull \vbox (badness 10000) has occurred while \output is active [3178] [3179] [3180] [3181]) (./namespacerossby__front__2d__initialization.tex [3182] [3183] Underfull \vbox (badness 10000) has occurred while \output is active [3184] [3185] [3186] [3187] [3188]) (./namespacescm__cvmix__tests.tex [3189] [3190] [3191] [3192] [3193] [3194]) (./namespaceseamount__initialization.tex [3195] [3196] [3197] [3198] Overfull \vbox (27.34378pt too high) has occurred while \output is active [3199]) (./namespaceshelfwave__initialization.tex [3200] [3201] [3202] [3203]) (./namespacesloshing__initialization.tex [3204] [3205] [3206] [3207] [3208]) (./namespacesoliton__initialization.tex [3209] [3210]) (./namespacesupercritical__initialization.tex [3211] Underfull \hbox (badness 3590) in paragraph at lines 8--8 []\T1/phv/m/n/10 The mod-ule con-fig-ures the model for the "su-per-crit-i-cal" ex-per-i-ment. [][]\T1/pcr/m/n/10 https[]://marine.[]rutgers.[] [3212]) (./namespacetidal__bay__initialization.tex [3213] Underfull \vbox (badness 10000) has occurred while \output is active [3214] [3215]) (./namespacetidal__forcing.tex) (./namespaceuser__change__diffusivity.tex [3216] Underfull \hbox (badness 10000) detected at line 42 [][][] [3217] [3218] Underfull \vbox (badness 10000) has occurred while \output is active [3219] [3220] [3221] Underfull \hbox (badness 10000) detected at line 348 [][][] ) (./namespaceuser__initialization.tex [3222] [3223] Overfull \vbox (51.4922pt too high) has occurred while \output is active [3224] [3225] [3226] [3227] [3228] Underfull \vbox (badness 10000) has occurred while \output is active [3229] [3230]) (./namespaceuser__revise__forcing.tex [3231] [3232]) (./namespaceuser__shelf__init.tex [3233] [3234] [3235] [3236] [3237] [3238]) (./namespaceuser__surface__forcing.tex [3239] [3240] Underfull \vbox (badness 10000) has occurred while \output is active [3241] [3242] [3243]) (./namespaceuser__tracer__example.tex [3244] [3245] [3246] [3247] [3248] [3249] [3250] [3251] Underfull \hbox (badness 10000) detected at line 496 [][][] [3252]) (./namespacewrite__ocean__obs__mod.tex [3253] [3254]) [3255] [3256] Chapter 48. (./structmom__variables_1_1accel__diag__ptrs.tex [3257 <./structmom__variables_ 1_1accel__diag__ptrs__coll__graph.pdf>]) (./structcoord__adapt_1_1adapt__cs.tex [3258] [3259 <./structcoord__adapt_1_1adapt__cs__coll__graph.pdf>]) (./structadvection__test__tracer_1_1advection__test__tracer__cs.tex [3260 <./st ructadvection__test__tracer_1_1advection__test__tracer__cs__coll__graph.pdf>]) (./structmom__ale_1_1ale__cs.tex [3261] [3262 <./structmom__ale_1_1ale__cs__col l__graph.pdf>]) (./structmom__ale__sponge_1_1ale__sponge__cs.tex [3263] [3264 <./structmom__ale__sponge_1_1ale__sponge__cs__coll__graph.pdf>] [3265]) (./interfacemom__forcing__type_1_1allocate__forcing__type.tex [3266] [3267] [3268]) (./interfacemom__forcing__type_1_1allocate__mech__forcing.tex [3269] [3270]) (./interfacemom__array__transform_1_1allocate__rotated__array.tex [3271] Overfull \vbox (25.74976pt too high) has occurred while \output is active [3272] [3273] Overfull \vbox (6.44917pt too high) has occurred while \output is active [3274]) (./interfacemom__hor__index_1_1assignment_07_0A_08.tex [3275]) (./interfacemom__coms_1_1assignment_07_0A_08.tex [3276]) (./structmom__tidal__forcing_1_1astro__longitudes.tex [3277]) (./structmom__diag__mediator_1_1axes__grp.tex [3278 <./structmom__tidal__forcin g_1_1astro__longitudes__coll__graph.pdf>] [3279 <./structmom__diag__mediator_1_ 1axes__grp__coll__graph.pdf>] [3280]) (./structmom__barotropic_1_1barotropic__cs.tex Underfull \vbox (badness 10000) has occurred while \output is active [3281] [3282 <./structmom__barotropic_1_1barotropic__cs__coll__graph.pdf>] [3283] [3284] [3285] [3286] [3287] [3288]) (./interfacemom__checksums_1_1bchksum.tex [3289] [3290] Underfull \vbox (badness 10000) has occurred while \output is active [3291] [3292] [3293] Underfull \vbox (badness 10000) has occurred while \output is active [3294]) (./interfacemom__checksums_1_1bchksum__pair.tex [3295] [3296] [3297]) (./structbfb__surface__forcing_1_1bfb__surface__forcing__cs.tex [3298] [3299 <. /structbfb__surface__forcing_1_1bfb__surface__forcing__cs__coll__graph.pdf>]) (./structmom__bkgnd__mixing_1_1bkgnd__mixing__cs.tex [3300 <./structmom__bkgnd_ _mixing_1_1bkgnd__mixing__cs__coll__graph.pdf>] [3301]) (./structboundary__impulse__tracer_1_1boundary__impulse__tracer__cs.tex [3302] [3303 <./structboundary__impulse__tracer_1_1boundary__impulse__tracer__c s__coll__graph.pdf>]) (./structmom__variables_1_1bt__cont__type.tex [3304] [3305 <./structmom__variables_1_1bt__cont__type__coll__graph.pdf>]) (./structmom__barotropic_1_1bt__obc__type.tex [3306] [3307 <./structmom__barotr opic_1_1bt__obc__type__coll__graph.pdf>]) (./structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs.tex [3308] [3309 <./stru ctmom__bulk__mixed__layer_1_1bulkmixedlayer__cs__coll__graph.pdf>] [3310] [3311]) (./interfacemom__eos_1_1calculate__compress.tex [3312] Underfull \vbox (badness 10000) has occurred while \output is active [3313] [3314]) (./interfacemom__eos_1_1calculate__density.tex [3315] Overfull \vbox (80.42377pt too high) has occurred while \output is active [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324]) (./interfacemom__eos_1_1calculate__density__derivs.tex [3325] [3326] [3327] Overfull \vbox (39.68802pt too high) has occurred while \output is active [3328]) (./interfacemom__eos__linear_1_1calculate__density__derivs__linear.tex [3329] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]linear [3330] Underfull \hbox (badness 10000) in paragraph at lines 94--95 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]linear [3331]) (./interfacemom__eos__nemo_1_1calculate__density__derivs__nemo.tex [3332] [3333]) (./interfacemom__eos__teos10_1_1calculate__density__derivs__teos10.tex [3334] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]teos10 [3335] Underfull \hbox (badness 10000) in paragraph at lines 92--93 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]teos10 [3336]) (./interfacemom__eos__wright_1_1calculate__density__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]wright [3337] [3338] Underfull \hbox (badness 10000) in paragraph at lines 95--96 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]wright [3339]) (./interfacemom__eos__linear_1_1calculate__density__linear.tex [3340] [3341]) (./interfacemom__eos__nemo_1_1calculate__density__nemo.tex [3342] [3343] Overfull \vbox (10.06525pt too high) has occurred while \output is active [3344]) (./interfacemom__eos_1_1calculate__density__second__derivs.tex [3345] [3346] [3347] [3348]) (./interfacemom__eos__linear_1_1calculate__density__second__derivs__linear.tex [3349] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] [3350] Underfull \hbox (badness 10000) in paragraph at lines 96--97 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] [3351]) (./interfacemom__eos__teos10_1_1calculate__density__second__derivs__teos10.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [3352] [3353] Underfull \hbox (badness 10000) in paragraph at lines 101--102 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [3354]) (./interfacemom__eos__wright_1_1calculate__density__second__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [3355] [3356] Underfull \hbox (badness 10000) in paragraph at lines 120--121 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [3357]) (./interfacemom__eos__teos10_1_1calculate__density__teos10.tex [3358] [3359]) (./interfacemom__eos__unesco_1_1calculate__density__unesco.tex [3360] [3361] Overfull \vbox (42.16423pt too high) has occurred while \output is active [3362]) (./interfacemom__eos__wright_1_1calculate__density__wright.tex [3363] [3364]) (./interfacemom__eos_1_1calculate__spec__vol.tex [3365] [3366] [3367] [3368] [3369]) (./interfacemom__eos__linear_1_1calculate__spec__vol__linear.tex [3370] [3371]) (./interfacemom__eos__teos10_1_1calculate__spec__vol__teos10.tex [3372] [3373] [3374]) (./interfacemom__eos__unesco_1_1calculate__spec__vol__unesco.tex [3375] [3376] Underfull \vbox (badness 10000) has occurred while \output is active [3377]) (./interfacemom__eos__wright_1_1calculate__spec__vol__wright.tex [3378] [3379]) (./interfacemom__eos_1_1calculate__specific__vol__derivs.tex [3380] Underfull \vbox (badness 10000) has occurred while \output is active [3381] [3382]) (./interfacemom__eos_1_1calculate__tfreeze.tex [3383] Overfull \vbox (50.59338pt too high) has occurred while \output is active [3384] Overfull \vbox (45.06868pt too high) has occurred while \output is active [3385]) (./interfacemom__tfreeze_1_1calculate__tfreeze__linear.tex [3386] [3387]) (./interfacemom__tfreeze_1_1calculate__tfreeze__millero.tex [3388] [3389] [3390]) (./interfacemom__tfreeze_1_1calculate__tfreeze__teos10.tex [3391] [3392]) (./interfacemom__debugging_1_1check__redundant.tex [3393] [3394] [3395] [3396]) (./interfacemom__debugging_1_1check__redundant__b.tex [3397] [3398] [3399] [3400] [3401]) (./interfacemom__debugging_1_1check__redundant__c.tex [3402] Overfull \vbox (103.58171pt too high) has occurred while \output is active [3403] [3404]) (./interfacemom__debugging_1_1check__redundant__t.tex [3405] [3406] [3407] [3408] [3409] [3410]) (./interfacemom__checksums_1_1chk__sum__msg.tex [3411] [3412] [3413]) (./interfacemom__checksums_1_1chksum.tex [3414] [3415] [3416]) (./interfacemom__domains_1_1clone__mom__domain.tex [3417] [3418] [3419] [3420] Underfull \vbox (badness 10000) has occurred while \output is active [3421]) (./structmom__variables_1_1cont__diag__ptrs.tex Underfull \vbox (badness 1902) has occurred while \output is active [3422]) (./structmom__continuity_1_1continuity__cs.tex [3423 <./structmom__variables_1_ 1cont__diag__ptrs__coll__graph.pdf>] [3424 <./structmom__continuity_1_1continui ty__cs__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1continuity__ppm__cs.tex [3425 <./structmom__co ntinuity__ppm_1_1continuity__ppm__cs__coll__graph.pdf>]) (./interfaceregrid__consts_1_1coordinateunits.tex [3426] Underfull \hbox (badness 10000) detected at line 37 [][][] [3427] Underfull \hbox (badness 10000) detected at line 76 [][][] ) (./structmom__coriolisadv_1_1coriolisadv__cs.tex [3428] [3429 <./structmom__c oriolisadv_1_1coriolisadv__cs__coll__graph.pdf>] [3430]) (./interfacemom__domains_1_1create__group__pass.tex [3431] [3432] [3433] [3434] [3435] [3436] [3437]) (./structmom__controlled__forcing_1_1ctrl__forcing__cs.tex [3438 <./structmom__ controlled__forcing_1_1ctrl__forcing__cs__coll__graph.pdf>] [3439] [3440] [3441]) (./structmom__cvmix__conv_1_1cvmix__conv__cs.tex [3442 <./structmom__cv mix__conv_1_1cvmix__conv__cs__coll__graph.pdf>]) (./structmom__cvmix__ddiff_1_1cvmix__ddiff__cs.tex [3443] [3444 <./structmom__c vmix__ddiff_1_1cvmix__ddiff__cs__coll__graph.pdf>]) (./structmom__cvmix__shear_1_1cvmix__shear__cs.tex [3445 <./structmom__cvmix__s hear_1_1cvmix__shear__cs__coll__graph.pdf>]) (./structmom__sum__output_1_1depth__list.tex [3446] [3447 <./structmom__sum__ou tput_1_1depth__list__coll__graph.pdf>]) (./structmom__diabatic__aux_1_1diabatic__aux__cs.tex [3448 <./structmom__diabat ic__aux_1_1diabatic__aux__cs__coll__graph.pdf>]) (./structmom__diabatic__driver_1_1diabatic__cs.tex [3449] Underfull \vbox (badness 10000) has occurred while \output is active [3450] [3451 <./structmom__diabatic__driver_1_1diabatic__cs__coll__graph.pdf>] [3452] [3453] [3454] [3455] [3456]) (./structmom__diag__mediator_1_1diag__ctrl.tex [3457] [3458 <./structmom__diag_ _mediator_1_1diag__ctrl__coll__graph.pdf>] [3459] [3460] [3461]) (./structmom__diag__mediator_1_1diag__dsamp.tex) (./structmom__diag__mediator_1_1diag__grid__storage.tex [3462 <./structmom__dia g__mediator_1_1diag__dsamp__coll__graph.pdf>] [3463 <./structmom__diag__mediato r_1_1diag__grid__storage__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__grids__type.tex) (./structmom__diag__remap_1_1diag__remap__ctrl.tex [3464 <./structmom__diag__me diator_1_1diag__grids__type__coll__graph.pdf>] [3465 <./structmom__diag__remap_ 1_1diag__remap__ctrl__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__type.tex [3466] [3467 <./structmom__diag_ _mediator_1_1diag__type__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diagcs__dsamp.tex [3468] [3469 <./structmom__di ag__mediator_1_1diagcs__dsamp__coll__graph.pdf>] [3470]) (./structmom__diagnostics_1_1diagnostics__cs.tex [3471] [3472 <./structmom__dia gnostics_1_1diagnostics__cs__coll__graph.pdf>] [3473] [3474] [3475]) (./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs.tex [3476] [3477 <./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs__coll__graph .pdf>]) (./structmom__set__diffusivity_1_1diffusivity__diags.tex [3478] [3479 <./structmom__set__diffusivity_1_1diffusivity__diags__coll__graph.pdf>]) (./structmom__get__input_1_1directories.tex [3480 <./structmom__get__input_1_1d irectories__coll__graph.pdf>]) (./interfacemom__document_1_1doc__param.tex [3481] [3482] Underfull \vbox (badness 10000) has occurred while \output is active [3483] [3484] [3485] [3486] [3487] [3488] [3489] [3490] [3491]) (./structmom__document_1_1doc__type.tex [3492 <./structmom__document_1_1doc__ty pe__coll__graph.pdf>]) (./structdome__tracer_1_1dome__tracer__cs.tex [3493] [3494 <./structdome__tracer_1_1dome__tracer__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1downsample__diag__field.tex [3495] [3496] [3497]) (./interfacemom__diag__mediator_1_1downsample__field.tex [3498] Underfull \vbox (badness 10000) has occurred while \output is active [3499] [3500] [3501]pdfTeX warning (ext4): destination with the same identifier (name{ namespacemom__diag__mediator_downsampling}) has been already used, duplicate ig nored \relax l.229 ...espacemom__diag__mediator_downsampling}{} \subsection{The down sampl... [3502] Overfull \hbox (36.1684pt too wide) in paragraph at lines 318--318 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [3503] Underfull \vbox (badness 10000) has occurred while \output is active [3504]) (./interfacemom__diag__mediator_1_1downsample__mask.tex [3505] [3506] [3507]) (./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs.tex Underfull \vbox (badness 3590) has occurred while \output is active [3508] [3509 <./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs__co ll__graph.pdf>]) (./structregional__dyes_1_1dye__tracer__cs.tex [3510 <./struct regional__dyes_1_1dye__tracer__cs__coll__graph.pdf>]) (./structdyed__channel__initialization_1_1dyed__channel__obc__cs.tex [3511]) (./structdyed__obc__tracer_1_1dyed__obc__tracer__cs.tex [3512 <./structdyed__ch annel__initialization_1_1dyed__channel__obc__cs__coll__graph.pdf>] [3513 <./str uctdyed__obc__tracer_1_1dyed__obc__tracer__cs__coll__graph.pdf>]) (./structmom__dyn__horgrid_1_1dyn__horgrid__type.tex [3514 <./structmom__dyn__h orgrid_1_1dyn__horgrid__type__coll__graph.pdf>] [3515] [3516] [3517] [3518]) (./interfacemom__coms_1_1efp__sum__across__pes.tex [3519] [3520] [3521]) (./structmom__coms_1_1efp__type.tex) (./structmom__energetic__pbl_1_1energetic__pbl__cs.tex [3522 <./structmom__coms _1_1efp__type__coll__graph.pdf>] [3523 <./structmom__energetic__pbl_1_1energeti c__pbl__cs__coll__graph.pdf>] [3524] [3525] [3526]) (./structmom__entrain__diffusive_1_1entrain__diffusive__cs.tex [3527 <./structm om__entrain__diffusive_1_1entrain__diffusive__cs__coll__graph.pdf>]) (./structmom__eos_1_1eos__type.tex [3528] [3529 <./structmom__eos_1_1eos__type_ _coll__graph.pdf>]) (./structmom__energetic__pbl_1_1epbl__column__diags.tex [3530 <./structmom__energetic__pbl_1_1epbl__column__diags__coll__graph.pdf>]) (./structmom__restart_1_1field__restart.tex [3531]) (./structmom__file__parser_1_1file__data__type.tex [3532 <./structmom__restart_ 1_1field__restart__coll__graph.pdf>]) (./interfacemom__io_1_1file__exists.tex [3533 <./structmom__file__parser_1_1file__data__type__coll__graph.pdf>] [3534]) (./structmom__open__boundary_1_1file__obc__cs.tex [3535]) (./interfacemom__horizontal__regridding_1_1fill__boundaries.tex [3536 <./struct mom__open__boundary_1_1file__obc__cs__coll__graph.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 71--72 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [3537]) (./interfacemom__domains_1_1fill__symmetric__edges.tex [3538] [3539] Underfull \vbox (badness 10000) has occurred while \output is active [3540]) (./interfacemom__interface__heights_1_1find__eta.tex [3541] [3542] [3543] [3544]) (./structmom__forcing__type_1_1forcing.tex [3545] [3546 <./structmom__f orcing__type_1_1forcing__coll__graph.pdf>] [3547] [3548]) (./structmom__forcing__type_1_1forcing__diags.tex [3549] [3550 <./structmom__fo rcing__type_1_1forcing__diags__coll__graph.pdf>] [3551] [3552] [3553] [3554]) (./structocean__da__types__mod_1_1forward__operator__type.tex [3555]) (./structg__tracer__utils_1_1g__diag__type.tex [3556 <./structocean__da__types_ _mod_1_1forward__operator__type__coll__graph.pdf>]) (./structg__tracer__utils_1_1g__tracer__common.tex [3557 <./structg__tracer__ut ils_1_1g__diag__type__coll__graph.pdf>] [3558 <./structg__tracer__utils_1_1g__t racer__common__coll__graph.pdf>]) (./interfaceg__tracer__utils_1_1g__tracer__get__pointer.tex [3559] [3560] [3561]) (./interfaceg__tracer__utils_1_1g__tracer__get__values.tex [3562] [3563] Overfull \vbox (58.06468pt too high) has occurred while \output is active [3564] [3565]) (./interfaceg__tracer__utils_1_1g__tracer__set__values.tex [3566] [3567] [3568]) (./structg__tracer__utils_1_1g__tracer__type.tex [3569 <. /structg__tracer__utils_1_1g__tracer__type__coll__graph.pdf>]) (./structmom__geothermal_1_1geothermal__cs.tex [3570]) (./interfacemom__file__parser_1_1get__param.tex [3571 <./structmom__geothermal_ 1_1geothermal__cs__coll__graph.pdf>] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584]) (./structmom__grid__initialize_1_1gps.tex [3585 <./structmom__grid__initialize_ 1_1gps__coll__graph.pdf>]) (./structocean__da__types__mod_1_1grid__type.tex [3586] [3587 <./structocean__da__types__mod_1_1grid__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1hchksum.tex [3588] [3589] Underfull \vbox (badness 10000) has occurred while \output is active [3590] [3591] Underfull \vbox (badness 10000) has occurred while \output is active [3592]) (./interfacemom__checksums_1_1hchksum__pair.tex [3593] [3594] [3595]) (./structmom__hor__index_1_1hor__index__type.tex [3596] [3597 <./structmom__hor __index_1_1hor__index__type__coll__graph.pdf>] [3598]) (./structmom__hor__visc_1_1hor__visc__cs.tex [3599 <./structmom__hor__visc_1_1h or__visc__cs__coll__graph.pdf>] [3600] [3601] [3602] [3603]) (./interfacemom__horizontal__regridding_1_1horiz__interp__and__extrap__tracer.t ex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [3604] [3605] Underfull \vbox (badness 10000) has occurred while \output is active [3606] Underfull \vbox (badness 10000) has occurred while \output is active [3607] Underfull \vbox (badness 10000) has occurred while \output is active [3608] Underfull \hbox (badness 10000) in paragraph at lines 371--372 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [3609] [3610] Underfull \vbox (badness 10000) has occurred while \output is active [3611] Underfull \vbox (badness 10000) has occurred while \output is active [3612] Underfull \vbox (badness 10000) has occurred while \output is active [3613] Underfull \vbox (badness 10000) has occurred while \output is active [3614]) (./structcoord__hycom_1_1hycom__cs.tex [3615 <./structcoord__hycom_1_1hycom__cs __coll__graph.pdf>]) (./structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type.tex [3616 <. /structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type__coll__graph.p df>] [3617]) (./structmom__ice__shelf_1_1ice__shelf__cs.tex Underfull \vbox (badness 1028) has occurred while \output is active [3618] [3619 <./structmom__ice__shelf_1_1ice__shelf__cs__coll__graph.pdf>] [3620] [3621] [3622]) (./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs.tex [3623] [3624 <./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs__coll__g raph.pdf>] [3625] [3626]) (./structmom__ice__shelf__state_1_1ice__shelf__state.tex [3627] [3628 <./struct mom__ice__shelf__state_1_1ice__shelf__state__coll__graph.pdf>]) (./structideal__age__example_1_1ideal__age__tracer__cs.tex [3629 <./structideal __age__example_1_1ideal__age__tracer__cs__coll__graph.pdf>]) (./structidealized__hurricane_1_1idealized__hurricane__cs.tex [3630] [3631 <./s tructidealized__hurricane_1_1idealized__hurricane__cs__coll__graph.pdf>]) (./interfacemom__ale__sponge_1_1initialize__ale__sponge.tex [3632] [3633] [3634] Underfull \vbox (badness 10000) has occurred while \output is active [3635] [3636] [3637] Underfull \vbox (badness 10000) has occurred while \output is active [3638]) (./structmom__internal__tides_1_1int__tide__cs.tex Underfull \vbox (badness 10000) has occurred while \output is active [3639] [3640 <./structmom__internal__tides_1_1int__tide__cs__coll__graph.pdf>] [3641] [3642]) (./structmom__int__tide__input_1_1int__tide__input__cs.tex [3643] [3644 <./structmom__int__tide__input_1_1int__tide__input__cs__coll__grap h.pdf>]) (./structmom__int__tide__input_1_1int__tide__input__type.tex [3645 <./ structmom__int__tide__input_1_1int__tide__input__type__coll__graph.pdf>]) (./structregrid__interp_1_1interp__cs__type.tex [3646 <./structregrid__interp_1 _1interp__cs__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1is__nan.tex [3647] [3648] [3649]) (./structisomip__tracer_1_1isomip__tracer__cs.tex Underfull \vbox (badness 1688) has occurred while \output is active [3650] [3651 <./structisomip__tracer_1_1isomip__tracer__cs__coll__graph.pdf>]) (./structmom__kappa__shear_1_1kappa__shear__cs.tex [3652 <./structmom__kappa__s hear_1_1kappa__shear__cs__coll__graph.pdf>] [3653]) (./structkdtree_1_1kd__root.tex [3654]) (./structkelvin__initialization_1_1kelvin__obc__cs.tex [3655 <./structkdtree_1_ 1kd__root__coll__graph.pdf>]) (./structmom__cvmix__kpp_1_1kpp__cs.tex [3656 <./ structkelvin__initialization_1_1kelvin__obc__cs__coll__graph.pdf>] [3657 <./str uctmom__cvmix__kpp_1_1kpp__cs__coll__graph.pdf>] [3658] [3659] [3660] [3661]) (./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diffusion__cs. tex [3662 <./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diff usion__cs__coll__graph.pdf>] [3663]) (./structmom__document_1_1link__msg.tex [3664 <./structmom__document_1_1link__msg__coll__graph.pdf>]) (./structmom__file__parser_1_1link__parameter.tex [3665 <./structmom__file__par ser_1_1link__parameter__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__u__type.tex [3666 <./structmom__ba rotropic_1_1local__bt__cont__u__type__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__v__type.tex [3667] [3668 <./struct mom__barotropic_1_1local__bt__cont__v__type__coll__graph.pdf>]) (./interfacemom__file__parser_1_1log__param.tex Underfull \hbox (badness 2065) in paragraph at lines 23--24 []\T1/phv/m/n/10 subroutine [][]log[]_[]param[]_[]int[]_[]array[][] (CS, mod-u- le-name, var-name, value, desc, units, de-fault, layout[]Param, [3669] [3670] [3671] [3672] [3673] [3674] [3675] Underfull \vbox (badness 10000) has occurred while \output is active [3676] [3677] [3678]) (./interfacemom__file__parser_1_1log__version.tex [3679] [3680]) (./structmom__ice__shelf__dynamics_1_1loop__bounds__type.tex [3681]) (./structmom__internal__tides_1_1loop__bounds__type.tex [3682 <./structmom__ice __shelf__dynamics_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1loop__bounds__type.tex [3683 <./structmom__int ernal__tides_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__marine__ice_1_1marine__ice__cs.tex [3684 <./structmom__continuity __ppm_1_1loop__bounds__type__coll__graph.pdf>]) (./structmom__forcing__type_1_1mech__forcing.tex [3685 <./structmom__marine__ic e_1_1marine__ice__cs__coll__graph.pdf>] [3686 <./structmom__forcing__type_1_1me ch__forcing__coll__graph.pdf>] [3687]) (./structmom__meke_1_1meke__cs.tex [3688 <./structmom__meke_1_1meke__cs__coll__graph.pdf>] [3689] [3690]) (./structmom__meke__types_1_1meke__type.tex [3691] [3692 <./structmom__meke__ty pes_1_1meke__type__coll__graph.pdf>]) (./structmom__barotropic_1_1memory__size__type.tex [3693]) (./structmeso__surface__forcing_1_1meso__surface__forcing__cs.tex [3694 <./stru ctmom__barotropic_1_1memory__size__type__coll__graph.pdf>] [3695 <./structmeso_ _surface__forcing_1_1meso__surface__forcing__cs__coll__graph.pdf>]) (./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs.tex [3696] [3697 <./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs__coll__gra ph.pdf>]) (./structmom_1_1mom__control__struct.tex [3698] Underfull \vbox (badness 10000) has occurred while \output is active [3699] [3700 <./structmom_1_1mom__control__struct__coll__graph.pdf>] [3701] [3702] [3703] [3704]) (./structmom_1_1mom__diag__ids.tex [3705]) (./structmom__domains_1_1mom__domain__type.tex [3706 <./structmom_1_1mom__diag_ _ids__coll__graph.pdf>] [3707 <./structmom__domains_1_1mom__domain__type__coll_ _graph.pdf>]) (./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs.tex [3708] [3709 <./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs__coll__gra ph.pdf>] [3710] [3711] [3712]) (./structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs.tex [3713] [3714 <./st ructmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs__coll__graph.pdf>] [3715]) (./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs.tex [3716] [3717 <./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs__coll_ _graph.pdf>] [3718]) (./structmom__generic__tracer_1_1mom__generic__tracer__cs.tex [3719]) (./interfacemom__io_1_1mom__read__data.tex [3720 <./structmom__generic__tracer_ 1_1mom__generic__tracer__cs__coll__graph.pdf>] [3721] [3722] [3723] [3724]) (./interfacemom__io_1_1mom__read__vector.tex [3725] [3726] [3727]) (./structmom__restart_1_1mom__restart__cs.tex Underfull \vbox (badness 2495) has occurred while \output is active [3728] [3729 <./structmom__restart_1_1mom__restart__cs__coll__graph.pdf>]) (./interfacemom__checksum__packages_1_1mom__state__chksum.tex [3730] [3731] Underfull \vbox (badness 10000) has occurred while \output is active [3732]) (./structmom__neutral__diffusion_1_1neutral__diffusion__cs.tex [3733] [3734 <./ structmom__neutral__diffusion_1_1neutral__diffusion__cs__coll__graph.pdf>] [3735] [3736]) (./structmom__open__boundary_1_1obc__registry__type.tex [3737 <. /structmom__open__boundary_1_1obc__registry__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__data__type.tex [3738 <./structmom __open__boundary_1_1obc__segment__data__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__tracer__type.tex [3739 <./structm om__open__boundary_1_1obc__segment__tracer__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__type.tex [3740] [3741 <./structmo m__open__boundary_1_1obc__segment__type__coll__graph.pdf>] [3742] [3743]) (./structmom__open__boundary_1_1obc__struct__type.tex [3744]) (./structmom__restart_1_1obsolete__restart.tex [3745 <./structmom__open__bounda ry_1_1obc__struct__type__coll__graph.pdf>]) (./structocean__da__types__mod_1_1ocean__control__struct.tex [3746 <./structmom __restart_1_1obsolete__restart__coll__graph.pdf>] [3747 <./structocean__da__typ es__mod_1_1ocean__control__struct__coll__graph.pdf>]) (./structmom__grid_1_1ocean__grid__type.tex [3748 <./structmom__grid_1_1ocean__ grid__type__coll__graph.pdf>] [3749] [3750] [3751] [3752]) (./structmom__variables_1_1ocean__internal__state.tex [3753] [3754 <./structmom __variables_1_1ocean__internal__state__coll__graph.pdf>]) (./interfaceocean__model__mod_1_1ocean__model__data__get.tex [3755] [3756] [3757]) (./structmom__open__boundary_1_1ocean__obc__type.tex Underfull \vbox (badness 3590) has occurred while \output is active [3758] [3759 <./structmom__open__boundary_1_1ocean__obc__type__coll__graph.pdf>] [3760] [3761]) (./structocean__da__types__mod_1_1ocean__profile__type.tex [3762] [3763 <./structocean__da__types__mod_1_1ocean__profile__type__coll__grap h.pdf>] [3764]) (./structocean__model__mod_1_1ocean__public__type.tex [3765 <./ structocean__model__mod_1_1ocean__public__type__coll__graph.pdf>]) (./structocean__model__mod_1_1ocean__state__type.tex [3766] Underfull \vbox (badness 10000) has occurred while \output is active [3767] [3768 <./structocean__model__mod_1_1ocean__state__type__coll__graph.pdf>] [3769]) (./structmom__ocmip2__cfc_1_1ocmip2__cfc__cs.tex [3770] [3771 <./struct mom__ocmip2__cfc_1_1ocmip2__cfc__cs__coll__graph.pdf>] [3772]) (./structmom__oda__driver__mod_1_1oda__cs.tex [3773] [3774 <./structmom__oda__d river__mod_1_1oda__cs__coll__graph.pdf>] [3775]) (./structmom__offline__main_1_1offline__transport__cs.tex [3776] [3777 <./struc tmom__offline__main_1_1offline__transport__cs__coll__graph.pdf>] [3778] [3779] [3780] [3781]) (./structoil__tracer_1_1oil__tracer__cs.tex [3782] [3783 <./structoil__tracer_1_1oil__tracer__cs__coll__graph.pdf>] [3784]) (./structmom__opacity_1_1opacity__cs.tex [3785 <./structmom__opacity_1_1opacity __cs__coll__graph.pdf>]) (./interfacemom__coms_1_1operator_07_09_08.tex [3786] Underfull \hbox (badness 10000) detected at line 35 [][][] ) (./interfacemom__coms_1_1operator_07-_08.tex [3787] Underfull \hbox (badness 10000) detected at line 35 [][][] ) (./structmom__opacity_1_1optics__type.tex [3788] [3789 <./structmom__opacity_ 1_1optics__type__coll__graph.pdf>]) (./structmom__restart_1_1p0d.tex) (./structmom__restart_1_1p1d.tex [3790 <./structmom__restart_1_1p0d__coll__grap h.pdf>]) (./structmom__ale__sponge_1_1p2d.tex [3791 <./structmom__restart_1_1p1 d__coll__graph.pdf>]) (./structmom__restart_1_1p2d.tex [3792 <./structmom__ale_ _sponge_1_1p2d__coll__graph.pdf>]) (./structmom__variables_1_1p2d.tex [3793 <./ structmom__restart_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_1p2d.tex [3794 <./structmom__variables_1_1p2d__coll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2d.tex [3795 <./structmom__sponge_1_1p2d__c oll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2di.tex [3796 <./structmo m__tracer__hor__diff_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_1p3d.tex [3797 <./structmom__tracer__hor__diff_1_1p2di__coll__graph.pdf>]) (./structmom__restart_1_1p3d.tex [3798 <./structmom__sponge_1_1p3d__coll__graph .pdf>]) (./structmom__ale__sponge_1_1p3d.tex [3799 <./structmom__restart_1_1p3d __coll__graph.pdf>]) (./structmom__variables_1_1p3d.tex [3800 <./structmom__ale __sponge_1_1p3d__coll__graph.pdf>]) (./structmom__restart_1_1p4d.tex [3801 <./s tructmom__variables_1_1p3d__coll__graph.pdf>]) (./structmom__file__parser_1_1param__file__type.tex [3802 <./structmom__restart _1_1p4d__coll__graph.pdf>] [3803 <./structmom__file__parser_1_1param__file__typ e__coll__graph.pdf>]) (./structmom__file__parser_1_1parameter__block.tex [3804]) (./interfacemom__domains_1_1pass__var.tex [3805 <./structmom__file__par ser_1_1parameter__block__coll__graph.pdf>] [3806] Underfull \vbox (badness 10000) has occurred while \output is active [3807] Overfull \vbox (17.1185pt too high) has occurred while \output is active [3808]) (./interfacemom__domains_1_1pass__var__complete.tex [3809] [3810] Overfull \vbox (9.01045pt too high) has occurred while \output is active [3811]) (./interfacemom__domains_1_1pass__var__start.tex [3812] Underfull \hbox (badness 10000) detected at line 54 [][][] [3813] [3814] Underfull \hbox (badness 10000) detected at line 131 [][][] ) (./interfacemom__domains_1_1pass__vector.tex [3815] [3816] [3817] [3818]) (./interfacemom__domains_1_1pass__vector__complete.tex [3819] [3820] [3821] [3822]) (./interfacemom__domains_1_1pass__vector__start.tex [3823] Underfull \hbox (badness 10000) detected at line 56 [][][] [3824] [3825] Underfull \hbox (badness 10000) detected at line 146 [][][] [3826]) (./structmom__pointaccel_1_1pointaccel__cs.tex [3827 <./structmom__poin taccel_1_1pointaccel__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1post__data.tex [3828] Overfull \vbox (38.17288pt too high) has occurred while \output is active [3829] [3830] [3831] Overfull \vbox (26.4347pt too high) has occurred while \output is active [3832] [3833]) (./structmom__pressureforce_1_1pressureforce__cs.tex [3834]) (./structmom__pressureforce__fv_1_1pressureforce__fv__cs.tex [3835 <./structmom __pressureforce_1_1pressureforce__cs__coll__graph.pdf>] [3836 <./structmom__pre ssureforce__fv_1_1pressureforce__fv__cs__coll__graph.pdf>]) (./structmom__pressureforce__mont_1_1pressureforce__mont__cs.tex [3837 <./struc tmom__pressureforce__mont_1_1pressureforce__mont__cs__coll__graph.pdf>]) (./structmom__random_1_1prng.tex [3838 <./structmom__random_1_1prng__coll__grap h.pdf>]) (./structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs.tex [3839 <. /structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs__coll__graph.pdf>]) (./structmom__oda__driver__mod_1_1ptr__mpp__domain.tex [3840]) (./interfacemom__checksums_1_1qchksum.tex [3841 <./structmom__oda__driver__mod_ 1_1ptr__mpp__domain__coll__graph.pdf>] [3842] Underfull \vbox (badness 10000) has occurred while \output is active [3843] [3844] [3845] Underfull \vbox (badness 10000) has occurred while \output is active [3846]) (./interfacemom__restart_1_1query__initialized.tex [3847] [3848] [3849] [3850] [3851] [3852] [3853] [3854] Overfull \vbox (1.00325pt too high) has occurred while \output is active [3855] [3856]) (./interfacemom__file__parser_1_1read__param.tex [3857] [3858] [3859] [3860] Overfull \vbox (16.03447pt too high) has occurred while \output is active [3861] [3862] [3863] [3864]) (./interfacemom__diag__manager__wrapper_1_1register__diag__field__fms.tex [3865] Underfull \hbox (badness 2626) in paragraph at lines 15--16 []\T1/phv/m/n/10 integer func-tion [][]register[]_[]diag[]_[]field[]_[]scalar[] _[]fms[][] (module[]_[]name, field[]_[]name, init[]_[]time, long[]_[]name, unit s, Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]array[]_[]fms [3866] Underfull \hbox (badness 10000) in paragraph at lines 116--117 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]scalar[]_[]fms [3867] [3868]) (./interfacemom__restart_1_1register__restart__field.tex [3869] [3870] [3871] [3872] [3873] [3874] [3875] Underfull \vbox (badness 10000) has occurred while \output is active [3876] [3877] [3878]) (./interfacemom__restart_1_1register__restart__pair.tex [3879] [3880]) (./structmom__regridding_1_1regridding__cs.tex [3881] [3882 <./structmo m__regridding_1_1regridding__cs__coll__graph.pdf>] [3883]) (./structmom__regularize__layers_1_1regularize__layers__cs.tex [3884 <./structm om__regularize__layers_1_1regularize__layers__cs__coll__graph.pdf>]) (./structmom__remapping_1_1remapping__cs.tex [3885] [3886 <./structmom__remappi ng_1_1remapping__cs__coll__graph.pdf>]) (./interfacemom__coms_1_1reproducing__sum.tex [3887] Underfull \hbox (badness 10000) detected at line 60 [][][] [3888] Underfull \vbox (badness 10000) has occurred while \output is active [3889] Underfull \hbox (badness 10000) detected at line 200 [][][] [3890] Underfull \vbox (badness 10000) has occurred while \output is active [3891] Underfull \vbox (badness 10000) has occurred while \output is active [3892]) (./interfacemom__coms_1_1reproducing__sum__efp.tex [3893] Underfull \hbox (badness 10000) detected at line 54 [][][] [3894] Underfull \vbox (badness 10000) has occurred while \output is active [3895]) (./structrgc__tracer_1_1rgc__tracer__cs.tex [3896 <./structrgc__tracer_1_1rgc__ tracer__cs__coll__graph.pdf>]) (./structcoord__rho_1_1rho__cs.tex [3897]) (./interfacemom__array__transform_1_1rotate__array.tex [3898 <./structcoord__rh o_1_1rho__cs__coll__graph.pdf>] [3899] [3900] Underfull \vbox (badness 10000) has occurred while \output is active [3901]) (./interfacemom__array__transform_1_1rotate__array__pair.tex [3902] [3903] [3904]) (./interfacemom__array__transform_1_1rotate__vector.tex [3905] [3906] Overfull \vbox (29.91698pt too high) has occurred while \output is active [3907]) (./interfacemom__transform__fms_1_1rotated__mpp__chksum.tex) (./interfacemom__transform__fms_1_1rotated__time__interp__external.tex [3908] Overfull \vbox (46.10497pt too high) has occurred while \output is active [3909]) (./interfacemom__transform__fms_1_1rotated__write__field.tex) (./interfacemom__safe__alloc_1_1safe__alloc__alloc.tex [3910] Overfull \vbox (22.88931pt too high) has occurred while \output is active [3911] [3912]) (./interfacemom__safe__alloc_1_1safe__alloc__ptr.tex [3913] [3914] [3915] [3916] Overfull \vbox (27.44069pt too high) has occurred while \output is active [3917]) (./structscm__cvmix__tests_1_1scm__cvmix__tests__cs.tex [3918 <./struct scm__cvmix__tests_1_1scm__cvmix__tests__cs__coll__graph.pdf>]) (./structmom__open__boundary_1_1segment__tracer__registry__type.tex [3919]) (./structmom__set__diffusivity_1_1set__diffusivity__cs.tex [3920 <./structmom__ open__boundary_1_1segment__tracer__registry__type__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3921] [3922 <./structmom__set__diffusivity_1_1set__diffusivity__cs__coll__graph.pdf>] [3923] [3924] [3925]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__field.tex [3926] [3927] [3928]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__vel__field.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [3929] Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [3930] [3931]) (./structmom__set__visc_1_1set__visc__cs.tex [3932] [3933 <./str uctmom__set__visc_1_1set__visc__cs__coll__graph.pdf>] [3934]) (./structshelfwave__initialization_1_1shelfwave__obc__cs.tex [3935]) (./structcoord__sigma_1_1sigma__cs.tex [3936 <./structshelfwave__initialization _1_1shelfwave__obc__cs__coll__graph.pdf>]) (./structcoord__slight_1_1slight__cs.tex [3937 <./structcoord__sigma_1_1sigma__ cs__coll__graph.pdf>] [3938 <./structcoord__slight_1_1slight__cs__coll__graph.p df>]) (./structmom__sponge_1_1sponge__cs.tex [3939 <./structmom__sponge_1_1spon ge__cs__coll__graph.pdf>] [3940]) (./interfaceregrid__consts_1_1state__dependent.tex [3941]) (./structmom__checksum__packages_1_1stats.tex [3942]) (./structmom__sum__output_1_1sum__output__cs.tex [3943 <./structmom__checksum__ packages_1_1stats__coll__graph.pdf>] [3944 <./structmom__sum__output_1_1sum__ou tput__cs__coll__graph.pdf>] [3945]) (./structmom__variables_1_1surface.tex [3946] [3947 <./structmom__variables_1_1surface__coll__graph.pdf>]) (./structmom__diagnostics_1_1surface__diag__ids.tex [3948] [3949 <./structmom__ diagnostics_1_1surface__diag__ids__coll__graph.pdf>]) (./structmom__surface__forcing_1_1surface__forcing__cs.tex [3950] [3951 <./stru ctmom__surface__forcing_1_1surface__forcing__cs__coll__graph.pdf>] [3952] [3953] [3954] [3955]) (./structmom__surface__forcing__gfdl_1_1surface__forcing__cs.tex [3956] [3957 <./structmom__surface__forcing__gfdl_1_1surface__forcing__cs__coll__graph .pdf>] [3958] [3959]) (./structmom__variables_1_1thermo__var__ptrs.tex [3960] [3961 <./structmom__variables_1_1thermo__var__ptrs__coll__graph.pdf>]) (./structmom__thickness__diffuse_1_1thickness__diffuse__cs.tex [3962] [3963 <./ structmom__thickness__diffuse_1_1thickness__diffuse__cs__coll__graph.pdf>] [3964]) (./structtidal__bay__initialization_1_1tidal__bay__obc__cs.tex [3965]) (./structmom__tidal__forcing_1_1tidal__forcing__cs.tex [3966 <./structtidal__ba y__initialization_1_1tidal__bay__obc__cs__coll__graph.pdf>] [3967 <./structmom_ _tidal__forcing_1_1tidal__forcing__cs__coll__graph.pdf>]) (./structmom__tidal__mixing_1_1tidal__mixing__cs.tex [3968] [3969 <./structmom_ _tidal__mixing_1_1tidal__mixing__cs__coll__graph.pdf>] [3970] [3971]) (./structmom__tidal__mixing_1_1tidal__mixing__diags.tex [3972] [3973 <./structm om__tidal__mixing_1_1tidal__mixing__diags__coll__graph.pdf>]) (./structmom__tracer__advect_1_1tracer__advect__cs.tex [3974]) (./structmom__tracer__flow__control_1_1tracer__flow__control__cs.tex [3975 <./s tructmom__tracer__advect_1_1tracer__advect__cs__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3976] [3977 <./structmom__tracer__flow__control_1_1tracer__flow__control__cs__coll__g raph.pdf>] [3978]) (./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs.tex Underfull \vbox (badness 1237) has occurred while \output is active [3979] [3980 <./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs__coll__graph.pdf >] [3981]) (./structmom__tracer__registry_1_1tracer__registry__type.tex) (./structmom__tracer__registry_1_1tracer__type.tex [3982 <./structmom__tracer__ registry_1_1tracer__registry__type__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [3983] [3984 <./structmom__tracer__registry_1_1tracer__type__coll__graph.pdf>] [3985] [3986]) (./structmom__diagnostics_1_1transport__diag__ids.tex [3987] [3988 <./structmom__diagnostics_1_1transport__diag__ids__coll__graph.pdf>]) (./interfacemom__checksums_1_1uchksum.tex [3989] [3990] Underfull \vbox (badness 10000) has occurred while \output is active [3991] [3992] [3993] Underfull \vbox (badness 10000) has occurred while \output is active [3994]) (./structmom__unit__scaling_1_1unit__scale__type.tex [3995] [3996 <./structmom_ _unit__scaling_1_1unit__scale__type__coll__graph.pdf>]) (./structmom__boundary__update_1_1update__obc__cs.tex [3997] [3998 <./structmom __boundary__update_1_1update__obc__cs__coll__graph.pdf>]) (./structuser__change__diffusivity_1_1user__change__diff__cs.tex [3999 <./struc tuser__change__diffusivity_1_1user__change__diff__cs__coll__graph.pdf>]) (./structuser__shelf__init_1_1user__ice__shelf__cs.tex [4000]) (./structuser__revise__forcing_1_1user__revise__forcing__cs.tex [4001 <./struct user__shelf__init_1_1user__ice__shelf__cs__coll__graph.pdf>]) (./structuser__surface__forcing_1_1user__surface__forcing__cs.tex [4002 <./stru ctuser__revise__forcing_1_1user__revise__forcing__cs__coll__graph.pdf>] [4003 <./structuser__surface__forcing_1_1user__surface__forcing__cs__coll__grap h.pdf>]) (./structuser__tracer__example_1_1user__tracer__example__cs.tex [4004 <./structuser__tracer__example_1_1user__tracer__example__cs__coll__graph. pdf>]) (./interfacemom__checksums_1_1uvchksum.tex [4005] Overfull \vbox (17.3705pt too high) has occurred while \output is active [4006] [4007] [4008] [4009]) (./structmom__io_1_1vardesc.tex [4010 <./structmom __io_1_1vardesc__coll__graph.pdf>]) (./structmom__lateral__mixing__coeffs_1_1varmix__cs.tex [4011 <./structmom__lat eral__mixing__coeffs_1_1varmix__cs__coll__graph.pdf>] [4012] [4013] [4014]) (./interfacemom__checksums_1_1vchksum.tex [4015] [4016] Underfull \vbox (badness 10000) has occurred while \output is active [4017] Overfull \vbox (14.08534pt too high) has occurred while \output is active [4018] [4019] Underfull \vbox (badness 10000) has occurred while \output is active [4020]) (./interfacemom__debugging_1_1vec__chksum.tex [4021] Overfull \vbox (18.60503pt too high) has occurred while \output is active [4022]) (./interfacemom__debugging_1_1vec__chksum__a.tex [4023] [4024]) (./interfacemom__debugging_1_1vec__chksum__b.tex [4025] [4026] [4027]) (./interfacemom__debugging_1_1vec__chksum__c.tex [4028] Overfull \vbox (18.60503pt too high) has occurred while \output is active [4029]) (./structmom__verticalgrid_1_1verticalgrid__type.tex [4030 <./structmom __verticalgrid_1_1verticalgrid__type__coll__graph.pdf>] [4031]) (./structmom__vert__friction_1_1vertvisc__cs.tex [4032] [4033 <./structmom__ver t__friction_1_1vertvisc__cs__coll__graph.pdf>] [4034] [4035]) (./structmom__variables_1_1vertvisc__type.tex [4036] [4037 <./structmom__variab les_1_1vertvisc__type__coll__graph.pdf>]) (./structmom__wave__interface_1_1wave__parameters__cs.tex [4038] [4039 <./struc tmom__wave__interface_1_1wave__parameters__cs__coll__graph.pdf>]) (./structmom__wave__speed_1_1wave__speed__cs.tex [4040] [4041 <./structmom__wav e__speed_1_1wave__speed__cs__coll__graph.pdf>]) (./structmom__wave__structure_1_1wave__structure__cs.tex [4042 <./structmom__wa ve__structure_1_1wave__structure__cs__coll__graph.pdf>]) (./structmom__write__cputime_1_1write__cputime__cs.tex [4043]) (./structcoord__zlike_1_1zlike__cs.tex [4044 <./structmom__write__cputime_1_1wr ite__cputime__cs__coll__graph.pdf>]) [4045 <./structcoord__zlike_1_1zlike__cs__ coll__graph.pdf>] [4046] Chapter 49. (./MOM__memory_8h.tex Underfull \hbox (badness 8189) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/config[]_[]src/dynamic[] _[]symmetric/[]M[]O[]M[]_[]memory.h File [4047 <./MOM__memory_8h__incl.pdf>]) (./MOM__memory__macros_8h.tex Underfull \hbox (badness 10000) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/src/framework/[]M[]O[]M[ ]_[]memory[]_[]macros.h File Ref-er- [4048] [4049 <./MOM__memory__macros_8h__dep__incl.pdf>] [4050] [4051] [4052]) [4053] (./refman.bbl (./refman.brf) [4054] [4055] [4056]) [4057] [4058] (./refman.ind Underfull \hbox (badness 10000) in paragraph at lines 3--5 []\T1/phv/m/n/10 /home/cermak/src/[]M[]O[]M6.[]devrob/config[]_[]src/dynamic[]_ [] Underfull \hbox (badness 10000) in paragraph at lines 5--7 []\T1/phv/m/n/10 /home/cermak/src/[]M[]O[]M6.[]devrob/src/framework/[]M[]O[]M[] _[] [4059] [4060] Underfull \hbox (badness 10000) in paragraph at lines 325--327 []\T1/phv/m/n/10 boundary[]_[]impulse[]_[]tracer[]::boundary[]_[]impulse[]_[]tr acer[]_[]cs, [4061] [4062] Underfull \hbox (badness 10000) in paragraph at lines 506--508 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]derivs[] _[]linear, Underfull \hbox (badness 10000) in paragraph at lines 510--512 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]nemo[]::calculate[]_[]density[]_[]derivs[]_[ ]nemo, Underfull \hbox (badness 10000) in paragraph at lines 514--516 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[] _[]teos10, Underfull \hbox (badness 10000) in paragraph at lines 518--520 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]derivs[] _[]wright, Underfull \hbox (badness 10000) in paragraph at lines 526--528 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]derivs[] _[]linear, Underfull \hbox (badness 10000) in paragraph at lines 530--532 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]nemo[]::calculate[]_[]density[]_[]derivs[]_[ ]nemo, Underfull \hbox (badness 10000) in paragraph at lines 534--536 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[] _[]teos10, Underfull \hbox (badness 10000) in paragraph at lines 538--540 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]derivs[] _[]wright, Underfull \hbox (badness 10000) in paragraph at lines 571--573 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 575--577 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 579--581 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 587--589 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 591--593 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[] _[] [4063] Underfull \hbox (badness 10000) in paragraph at lines 595--597 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[] _[] Underfull \hbox (badness 10000) in paragraph at lines 621--623 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]unesco[]::calculate[]_[]spec[]_[]vol[]_[]une sco, Underfull \hbox (badness 10000) in paragraph at lines 641--643 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]unesco[]::calculate[]_[]spec[]_[]vol[]_[]une sco, [4064] [4065] [4066] [4067] [4068] [4069] [4070] Underfull \hbox (badness 10000) in paragraph at lines 1426--1428 []\T1/phv/m/n/10 dumbbell[]_[]surface[]_[]forcing[]::dumbbell[]_[]surface[]_[]f orcing[]_[]cs, [4071] [4072] [4073] [4074] [4075] Underfull \hbox (badness 10000) in paragraph at lines 2093--2095 []| \T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]an d[]_[] Underfull \hbox (badness 10000) in paragraph at lines 2097--2099 []| \T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]an d[]_[] [4076] [4077] [4078] [4079] [4080] [4081] [4082] [4083] [4084] [4085] Underfull \hbox (badness 10000) in paragraph at lines 3240--3242 []\T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_[] field[]_[]fms, [4086] [4087] Underfull \hbox (badness 10000) in paragraph at lines 3575--3577 []\T1/phv/m/n/10 mom[]_[]dynamics[]_[]unsplit[]_[]rk2[]::mom[]_[]dyn[]_[]unspli t[]_[]rk2[]_[]cs, [4088] Underfull \hbox (badness 10000) in paragraph at lines 3714--3716 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]l inear, Underfull \hbox (badness 10000) in paragraph at lines 3737--3739 []\T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3741--3743 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]l inear, Underfull \hbox (badness 10000) in paragraph at lines 3781--3783 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]te os10, Underfull \hbox (badness 10000) in paragraph at lines 3783--3785 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]t eos10, Underfull \hbox (badness 10000) in paragraph at lines 3791--3793 []\T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[ ]teos10, Underfull \hbox (badness 10000) in paragraph at lines 3797--3799 []\T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3799--3801 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]te os10, Underfull \hbox (badness 10000) in paragraph at lines 3801--3803 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]t eos10, [4089] Underfull \hbox (badness 10000) in paragraph at lines 3849--3851 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]wr ight, Underfull \hbox (badness 10000) in paragraph at lines 3851--3853 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]w right, Underfull \hbox (badness 10000) in paragraph at lines 3868--3870 []\T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] Underfull \hbox (badness 10000) in paragraph at lines 3870--3872 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]wr ight, Underfull \hbox (badness 10000) in paragraph at lines 3872--3874 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]w right, [4090] [4091] Underfull \hbox (badness 10000) in paragraph at lines 4161--4163 []\T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]and[ ]_[]extrap[]_[] [4092] [4093] Underfull \hbox (badness 10000) in paragraph at lines 4361--4363 []\T1/phv/m/n/10 mom[]_[]lateral[]_[]boundary[]_[]diffusion[]::lateral[]_[]boun dary[]_[] [4094] [4095] Underfull \hbox (badness 10000) in paragraph at lines 4633--4635 []\T1/phv/m/n/10 mom[]_[]open[]_[]boundary[]::segment[]_[]tracer[]_[]registry[] _[]type, [4096] [4097] Underfull \hbox (badness 10000) in paragraph at lines 5002--5004 []| \T1/phv/m/n/10 mom[]_[]checksum[]_[]packages[]::mom[]_[]state[]_[]chksum, Underfull \hbox (badness 10000) in paragraph at lines 5006--5008 []| \T1/phv/m/n/10 mom[]_[]checksum[]_[]packages[]::mom[]_[]state[]_[]chksum, [4098] Underfull \hbox (badness 10000) in paragraph at lines 5110--5112 []\T1/phv/m/n/10 mom[]_[]surface[]_[]forcing[]_[]gfdl[]::ice[]_[]ocean[]_[]boun dary[]_[]type, [4099] [4100] [4101] [4102] [4103] [4104] [4105] [4106] Underfull \hbox (badness 10000) in paragraph at lines 6142--6144 []| \T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_ []field[] [4107] Underfull \hbox (badness 10000) in paragraph at lines 6151--6153 []| \T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_ []field[] [4108] [4109] Underfull \hbox (badness 10000) in paragraph at lines 6497--6499 []| \T1/phv/m/n/10 mom[]_[]transform[]_[]fms[]::rotated[]_[]time[]_[]interp[]_[ ]external, [4110] [4111] Underfull \hbox (badness 10000) in paragraph at lines 6726--6728 []| \T1/phv/m/n/10 mom[]_[]ale[]_[]sponge[]::set[]_[]up[]_[]ale[]_[]sponge[]_[] vel[]_[]field, Underfull \hbox (badness 10000) in paragraph at lines 6730--6732 []| \T1/phv/m/n/10 mom[]_[]ale[]_[]sponge[]::set[]_[]up[]_[]ale[]_[]sponge[]_[] vel[]_[]field, [4112] [4113] [4114] [4115] [4116] [4117]) (./refman.aux) LaTeX Warning: There were undefined references. LaTeX Warning: There were multiply-defined labels. ) (see the transcript file for additional information)pdfTeX warning (dest): name {MESO__surface__forcing_8F90_source} has been referenced but does not exist, re placed by a fixed one pdfTeX warning (dest): name{MOM__diabatic__aux_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__tidal__mixing_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__kappa__shear_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__barotropic_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM_8F90_source} has been referenced but does not e xist, replaced by a fixed one pdfTeX warning (dest): name{MOM__variables_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__surface__forcing_8F90_source} has been referen ced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{write__ocean__obs_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__types_8F90_source} has been referenced b ut does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__core_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{kdtree_8f90_source} has been referenced but does no t exist, replaced by a fixed one {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb> Output written on refman.pdf (4191 pages, 15115373 bytes). Transcript written on refman.log. make[1]: Leaving directory '/home/cermak/src/MOM6.devrob/docs/_build/doxygen_latex'