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Chapter 1.
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Chapter 2.
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Chapter 3.
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Chapter 4.
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Chapter 5.
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Chapter 6.
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Chapter 7.
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Chapter 8.
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Chapter 9.

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Chapter 10.
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Chapter 11.
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Chapter 12.
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Chapter 13.

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[107] [108]
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[110]
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[114]
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[115]
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[119]
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[120]
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[121]
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[238] [239] [240] [241] [242] [243] [244] [245]
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\T1/ptm/m/it/10 HI_m\T1/ptm/m/n/10 , \T1/ptm/m/it/10 haloshift\T1/ptm/m/n/10 , 
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[250]
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\T1/ptm/m/it/10 HI_m\T1/ptm/m/n/10 , \T1/ptm/m/it/10 haloshift\T1/ptm/m/n/10 , 
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[251]
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\T1/ptm/m/it/10 HI_m\T1/ptm/m/n/10 , \T1/ptm/m/it/10 haloshift\T1/ptm/m/n/10 , 
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\T1/ptm/m/it/10 HI_m\T1/ptm/m/n/10 , \T1/ptm/m/it/10 haloshift\T1/ptm/m/n/10 , 
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\T1/ptm/m/it/10 HI_m\T1/ptm/m/n/10 , \T1/ptm/m/it/10 haloshift\T1/ptm/m/n/10 , 
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[268]
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m/m/it/10 h_L\T1/ptm/m/n/10 , \T1/ptm/m/it/10 h_R\T1/ptm/m/n/10 , \T1/ptm/m/it/
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[271]
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[272]
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[275]
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[313]
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[322]
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[324] [325] [326] [327] [328] [329]
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[330]
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[331]
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[424]
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[426]
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[429]
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[430]
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[434]
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[435]
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[436]
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[437] [438] [439] [440] [441] [442]
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\T1/ptm/m/it/10 dT_to_dPE_b\T1/ptm/m/n/10 , \T1/ptm/m/it/10 dS_to_dPE_b\T1/ptm/
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[445]
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[]\T1/ptm/m/it/10 CS\T1/ptm/m/n/10 , \T1/ptm/m/it/10 US\T1/ptm/m/n/10 , \T1/ptm
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[446]
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[447]
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[460]
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[462]
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[463]
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[464]
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[465]
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[466]
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[467]
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[468]
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[469]
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[470]
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[472]
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[473]
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[585]
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[588]
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[594]
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[685]
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[686]
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[687]
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[688] [689] [690]
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[691]
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[692]
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[693]
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[698]
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[699] [700]
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[701]
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[702]
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[703] [704]
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[707] [708] [709] [710] [711] [712]
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[713]
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[714]
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[715]
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[716]
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[717]
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[718] [719]
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[720]
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[721]
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[722]
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[723]
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[724] [725] [726] [727] [728] [729] [730] [731]
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[732]
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[733]
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[]\T1/ptm/b/n/10 segment_str \T1/ptm/m/n/10 :: [in] A string in form of ^^PVAR1
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[]\T1/ptm/b/n/10 segment_str \T1/ptm/m/n/10 :: [in] A string in form of ^^PVAR1
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[734]
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[735]
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[736]
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[737] [738]
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[739]
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[740]
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[741]
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[742]
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[743]
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[747]
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[749] [750]
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[754]
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[764]
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[765]
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[767]
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[840]
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[841]
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[844] [845] [846]
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[847]
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[848]
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[849] [850] [851] [852]
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[853]
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[854]
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[855]
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[856]
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[857]
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[858]
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[859] [860] [861] [862]
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[863]
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[864]
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[865]
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[866]
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[869]
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\T1/ptm/m/n/10 where $\OML/cmm/m/it/10 f\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 c[]; 
z\OT1/cmr/m/n/10 )$ \T1/ptm/m/n/10 is a ver-ti-cal struc-ture func-tion. $\OML/
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[870]
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[871]
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[872]
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[873]
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[874]
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[875]
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[876] [877]
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[878]
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ptm/m/it/10 eta_tidal\T1/ptm/m/n/10 , \T1/ptm/m/it/10 G\T1/ptm/m/n/10 , \T1/ptm
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[879]
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[880] [881] [882] [883]
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[]\T1/ptm/m/it/10 h\T1/ptm/m/n/10 , \T1/ptm/m/it/10 N2_bot\T1/ptm/m/n/10 , \T1/
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\T1/ptm/m/it/10 max_TKE\T1/ptm/m/n/10 , \T1/ptm/m/it/10 G\T1/ptm/m/n/10 , \T1/p
tm/m/it/10 GV\T1/ptm/m/n/10 , \T1/ptm/m/it/10 US\T1/ptm/m/n/10 , \T1/ptm/m/it/1
0 CS\T1/ptm/m/n/10 ,
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[884]
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[]\T1/ptm/m/it/10 h\T1/ptm/m/n/10 , \T1/ptm/m/it/10 N2_bot\T1/ptm/m/n/10 , \T1/
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\T1/ptm/m/it/10 N2_lay\T1/ptm/m/n/10 , \T1/ptm/m/it/10 Kd_lay\T1/ptm/m/n/10 , \
T1/ptm/m/it/10 Kd_int\T1/ptm/m/n/10 ,
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[885]
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[]\T1/ptm/m/it/10 G\T1/ptm/m/n/10 , \T1/ptm/m/it/10 US\T1/ptm/m/n/10 , \T1/ptm/
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[886]
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[][][]\T1/pcr/m/sl/10 mom_remapping::initialize_remapping[][] [][]mom_error_han
dler::mom_error[][] 
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[887]
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[][][]\T1/pcr/m/sl/10 mom_ice_shelf::add_shelf_flux[][] [][]mom_controlled_forc
ing::apply_ctrl_forcing[][]
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\T1/pcr/m/n/10 mom_main [][]\T1/pcr/m/sl/10 mom_offline_main::offline_transport
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[][]\T1/pcr/m/sl/10 mom_file_parser::read_param_time[][] [][]mom_dynamics_unspl
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[888]
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[889] [890]
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[891]
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cs[][]
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\T1/ptm/m/it/10 in_flux_optional\T1/ptm/m/n/10 ,
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[892]
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[][]\T1/pcr/m/sl/10 mom_ocmip2_cfc::ocmip2_cfc_column_physics[][] [][]mom_offli
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[893]
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[894] [895]
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[][][]\T1/pcr/m/sl/10 mom_file_parser::close_param_file[][] [][]mom_get_input::
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[896]
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\T1/ptm/m/it/10 dt\T1/ptm/m/n/10 , \T1/ptm/m/it/10 G\T1/ptm/m/n/10 , \T1/ptm/m/
it/10 GV\T1/ptm/m/n/10 , \T1/ptm/m/it/10 US\T1/ptm/m/n/10 , \T1/ptm/m/it/10 tv\
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[897]
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[][][]\T1/pcr/m/sl/10 mom_diabatic_driver::adiabatic[][] [][]mom_diabatic_drive
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[898]
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\T1/ptm/m/it/10 dex\T1/ptm/m/n/10 , \T1/ptm/m/it/10 stock_values\T1/ptm/m/n/10 
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\T1/ptm/m/it/10 max_ns\T1/ptm/m/n/10 , \T1/ptm/m/it/10 ns_tot\T1/ptm/m/n/10 , \
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[899]
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[900]
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[]\T1/pcr/b/n/10 % use_lateral_boundary_diffusion \T1/ptm/m/it/10 [logical] \T1
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[901]
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][]
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[][]\T1/pcr/m/sl/10 mom_tracer_registry::mom_tracer_chksum[][] [][]mom_neutral_
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[902]
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[903]
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[904]
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tree_enter[][]
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[905] [906] [907]
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1/ptm/m/it/10 param_file\T1/ptm/m/n/10 , \T1/ptm/m/it/10 HI\T1/ptm/m/n/10 , \T1
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tm/m/it/10 df_x\T1/ptm/m/n/10 , \T1/ptm/m/it/10 df_y\T1/ptm/m/n/10 , \T1/ptm/m/
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[908] [909]
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[910]
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[911]
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[912]
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[913]
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[914] [915]
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[916]
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[917]
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[918]
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[919]
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[920]
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[921]
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[922]
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[923] [924] [925] [926]
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[]\T1/pcr/b/n/10 % min_salinity \T1/ptm/m/it/10 [real] \T1/ptm/m/n/10 :: The mi
n-i-mum value of salin-ity when
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[927] [928]
Underfull \hbox (badness 10000) in paragraph at lines 90627--90627
[]\T1/ptm/m/it/10 sfc_state\T1/ptm/m/n/10 , \T1/ptm/m/it/10 G\T1/ptm/m/n/10 , \
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[929]
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[930] [931] [932] [933]
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[934]
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[935]
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[936] [937] [938]
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[939]
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[940] [941]
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[942]
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[]\T1/pcr/m/n/10 dhh85 dhh85_is_set [][]\T1/pcr/m/sl/10 dhh85_mid[][] [][]get_l
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[943]
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Underfull \hbox (badness 10000) in paragraph at lines 92242--92244
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[944] [945] [946]
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[947]
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[948] [949]
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[950]
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[951] [952] [953]
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[954]
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[955]
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[956]
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[957] [958]
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[959]
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[960]
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[961] [962] [963]
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[964] [965] [966]
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[967]
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[968]
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[969] [970] [971]
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[972]
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[973]
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[974] [975]
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[976]
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[977]
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[978]
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[979] [980]
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[981]
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[982]
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[983] [984]
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[985]
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[989]
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[990]
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[991]
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[992]
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[996]
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[998]
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[999]
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[1000]
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[1001]
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[1002]
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[1003]
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[1004]
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[1005]
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[1006] [1007]
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[1008] [1009]
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[1010]
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[1011]
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[1012]
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[1013]
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[1014]
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[1015]
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[][][]\T1/pcr/m/sl/10 hml[][] \T1/pcr/m/n/10 mdl [][]\T1/pcr/m/sl/10 mom_error_
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[1021]
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[1023]
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[1026]
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[1027]
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[1028]
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[1029]
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[1030]
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[1031]
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[1032]
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[1033]
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[1034] [1035]
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[1038]
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[1039]
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[1040]
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[1041] [1042] [1043] [1044]
Chapter 14.
[1045

] [1046

]
Chapter 15.
[1047] [1048

]
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[]\T1/ptm/m/n/10 Akio Arakawa and Vi-vian R. Lamb. A Po-ten-tial En-stro-phy an
d En-ergy Con-serv-ing Scheme
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\T1/ptm/m/n/10 for the Shal-low Wa-ter Equa-tions. \T1/ptm/m/it/10 Monthly Weat
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[1049

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\T1/ptm/m/n/10 phy. \T1/ptm/m/it/10 Jour-nal of Phys-i-cal Oceanog-ra-phy\T1/pt
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.
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[1050]
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[1051]
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[]\T1/ptm/m/n/10 Laurent White, Al-is-tair Ad-croft, and Robert Hall-berg. High
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[1052] [1053


] [1054] [1055] (./MOM6.ind [1056


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n mod-ule
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[1066]
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n mod-ule
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od-ule
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[1067]
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[]\T1/pcr/m/n/10 dumbbell_initialize_temperature_salinity()
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[]\T1/pcr/m/n/10 dumbbell_initialize_thickness() \T1/ptm/m/n/10 (\T1/ptm/m/it/1
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[]\T1/pcr/m/n/10 dumbbell_surface_forcing_init()
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ne in mod-ule
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[]\T1/pcr/m/n/10 dyed_channel_set_obc_tracer_data()
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pe in mod-ule
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[]\T1/pcr/m/n/10 dz_function1() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-ro
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[]\T1/pcr/m/n/10 efp_assign() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-
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[]\T1/pcr/m/n/10 efp_real_diff() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-
tion in mod-ule
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[]\T1/pcr/m/n/10 efp_to_real() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-ti
on in mod-ule
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[1068]
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[]\T1/pcr/m/n/10 epbl_column() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou
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e in mod-ule
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[]\T1/pcr/m/n/10 external_gwave_initialize_thickness()
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ion in mod-ule
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ion in mod-ule
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on in mod-ule
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[]\T1/pcr/m/n/10 f_to_ent() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-ti
ne in mod-ule
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[1069]
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[]\T1/pcr/m/n/10 initialize_temp_salt_from_profile()
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[]\T1/pcr/m/n/10 initialize_topography_from_file()
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[]\T1/pcr/m/n/10 initialize_velocity_from_file()
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n in mod-ule
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[]\T1/pcr/m/n/10 int_tide_input_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran typ
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[]\T1/pcr/m/n/10 interp_cs_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type i
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[]\T1/pcr/m/n/10 ints_to_real() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-t
ion in mod-ule
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[]\T1/pcr/m/n/10 invcosh() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion i
n mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 1964--1966
[]\T1/pcr/m/n/10 is_nan_0d() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion
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[]\T1/pcr/m/n/10 is_nan_1d() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion
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[]\T1/pcr/m/n/10 is_nan_2d() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion
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[]\T1/pcr/m/n/10 is_nan_3d() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion
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[]\T1/pcr/m/n/10 is_new_run() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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[]\T1/pcr/m/n/10 is_root_pe() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 1976--1978
[]\T1/pcr/m/n/10 is_unstable() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-ti
on in mod-ule
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[]\T1/pcr/m/n/10 isomip_initialize_temperature_salinity()
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[]\T1/pcr/m/n/10 isomip_initialize_topography() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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[]\T1/pcr/m/n/10 isomip_tracer_column_physics() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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[]\T1/pcr/m/n/10 isomip_tracer_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type
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[]\T1/pcr/m/n/10 ispointincell() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-
tion in mod-ule
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[]\T1/pcr/m/n/10 kappa_shear_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type i
n mod-ule
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[]\T1/pcr/m/n/10 kelvin_initialize_topography() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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[]\T1/pcr/m/n/10 kelvin_obc_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type in
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[]\T1/pcr/m/n/10 kpp_end() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tin
e in mod-ule
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[]\T1/pcr/m/n/10 kpp_get_bld() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou
-tine in mod-ule
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[]\T1/pcr/m/n/10 kpp_init() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion 
in mod-ule
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[1076]
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[]\T1/pcr/m/n/10 lateral_boundary_diffusion()
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[]\T1/pcr/m/n/10 lateral_boundary_diffusion_init()
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[]\T1/pcr/m/n/10 left_real() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion
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[]\T1/pcr/m/n/10 left_reals() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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n mod-ule
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[]\T1/pcr/m/n/10 localtesti() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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[]\T1/pcr/m/n/10 localtestr() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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[]\T1/pcr/m/n/10 localtests() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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[]\T1/pcr/m/n/10 lock_exchange_initialize_thickness()
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[]\T1/pcr/m/n/10 logical_string() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func
-tion in mod-ule
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[]\T1/pcr/m/n/10 lowercase() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion
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[]\T1/pcr/m/n/10 make_frazil() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou
-tine in mod-ule
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[]\T1/pcr/m/n/10 marine_ice_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type in
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[1077]
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[]\T1/pcr/m/n/10 mech_forcing \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type in 
mod-ule
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[]\T1/pcr/m/n/10 mech_forcing_singlepointprint() \T1/ptm/m/n/10 (\T1/ptm/m/it/1
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[]\T1/pcr/m/n/10 meke_end() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-ti
ne in mod-ule
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[]\T1/pcr/m/n/10 meshgrid() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-ti
ne in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2216--2218
[]\T1/pcr/m/n/10 mixedlayer_restrat_register_restarts()
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\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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[1078]
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[]\T1/pcr/m/n/10 mom_domain_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type 
in mod-ule
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[]\T1/pcr/m/n/10 mom_dyn_unsplit_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran ty
pe in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2297--2299
[]\T1/pcr/m/n/10 mom_error() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-t
ine in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2311--2313
[]\T1/pcr/m/n/10 mom_generic_tracer_column_physics()
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\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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[]\T1/pcr/m/n/10 mom_generic_tracer_fluxes_accumulate()
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[]\T1/pcr/m/n/10 mom_generic_tracer_surface_state()
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[]\T1/pcr/m/n/10 mom_grid_end() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-ro
u-tine in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2354--2356
[]\T1/pcr/m/n/10 mom_initialize_tracer_from_z()
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Underfull \hbox (badness 10000) in paragraph at lines 2354--2356
\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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[1079]
Underfull \hbox (badness 10000) in paragraph at lines 2361--2363
[]\T1/pcr/m/n/10 mom_io_init() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou
-tine in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2365--2367
[]\T1/pcr/m/n/10 mom_lateral_boundary_diffusion \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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Underfull \hbox (badness 10000) in paragraph at lines 2373--2375
[]\T1/pcr/m/n/10 mom_mesg() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-ti
ne in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2407--2409
[]\T1/pcr/m/n/10 mom_restart_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type i
n mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2440--2442
[]\T1/pcr/m/n/10 mom_temp_salt_initialize_from_z()
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\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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[]\T1/pcr/m/n/10 mom_tracer_initialization_from_z \T1/ptm/m/n/10 (\T1/ptm/m/it/
10 mod-
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[1080]
Underfull \hbox (badness 10000) in paragraph at lines 2478--2480
[]\T1/pcr/m/n/10 mom_wave_interface_init_lite() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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Underfull \hbox (badness 10000) in paragraph at lines 2491--2493
[]\T1/pcr/m/n/10 myalloc() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tin
e in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2493--2495
[]\T1/pcr/m/n/10 mystats() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tin
e in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2508--2510
[]\T1/pcr/m/n/10 neutral_diffusion_calc_coeffs() \T1/ptm/m/n/10 (\T1/ptm/m/it/1
0 for-tran
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Underfull \hbox (badness 10000) in paragraph at lines 2516--2518
[]\T1/pcr/m/n/10 neutral_diffusion_unit_tests() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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Underfull \hbox (badness 10000) in paragraph at lines 2523--2525
[]\T1/pcr/m/n/10 neverworld_initialize_thickness()
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Underfull \hbox (badness 10000) in paragraph at lines 2523--2525
\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule nev-er-
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Underfull \hbox (badness 10000) in paragraph at lines 2525--2527
[]\T1/pcr/m/n/10 neverworld_initialize_topography()
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Underfull \hbox (badness 10000) in paragraph at lines 2525--2527
\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule nev-er-
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Underfull \hbox (badness 10000) in paragraph at lines 2531--2533
[]\T1/pcr/m/n/10 nodal_fu() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-ti
ne in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2533--2535
[]\T1/pcr/m/n/10 ns_coast() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion 
in mod-ule
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Underfull \hbox (badness 6825) in paragraph at lines 2535--2537
[]\T1/pcr/m/n/10 ns_coast() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion 
in mod-ule nev-er-
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Underfull \hbox (badness 5161) in paragraph at lines 2537--2539
[]\T1/pcr/m/n/10 ns_conic_ridge() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func
-tion in mod-ule
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Underfull \hbox (badness 6825) in paragraph at lines 2539--2541
[]\T1/pcr/m/n/10 ns_ridge() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion 
in mod-ule nev-er-
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Underfull \hbox (badness 5161) in paragraph at lines 2543--2545
[]\T1/pcr/m/n/10 num_timelevels() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func
-tion in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2552--2554
[]\T1/pcr/m/n/10 obc_registry_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran typ
e in mod-ule
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[]\T1/pcr/m/n/10 obc_segment_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type
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Underfull \hbox (badness 10000) in paragraph at lines 2560--2562
[]\T1/pcr/m/n/10 obc_struct_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type 
in mod-ule
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[]\T1/pcr/m/n/10 obsolete_int() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-ro
u-tine in mod-ule
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[1081]
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[]\T1/pcr/m/n/10 obsolete_restart \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type
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Underfull \hbox (badness 10000) in paragraph at lines 2578--2580
[]\T1/pcr/m/n/10 ocean_grid_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type 
in mod-ule
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[]\T1/pcr/m/n/10 ocean_obc_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type i
n mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2603--2605
[]\T1/pcr/m/n/10 ocean_profile_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran ty
pe in mod-ule
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[]\T1/pcr/m/n/10 ocean_public_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran typ
e in mod-ule
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[]\T1/pcr/m/n/10 ocean_state_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type
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Underfull \hbox (badness 10000) in paragraph at lines 2617--2619
[]\T1/pcr/m/n/10 ocmip2_cfc_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type in
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Underfull \hbox (badness 10000) in paragraph at lines 2625--2627
[]\T1/pcr/m/n/10 oda() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in
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Underfull \hbox (badness 10000) in paragraph at lines 2629--2631
[]\T1/pcr/m/n/10 oda_end() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tin
e in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2639--2641
[]\T1/pcr/m/n/10 offline_fw_fluxes_into_ocean() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
 for-tran
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Underfull \hbox (badness 10000) in paragraph at lines 2643--2645
[]\T1/pcr/m/n/10 offline_redistribute_residual() \T1/ptm/m/n/10 (\T1/ptm/m/it/1
0 for-tran
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Underfull \hbox (badness 10000) in paragraph at lines 2666--2668
[]\T1/pcr/m/n/10 opacity_end() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou
-tine in mod-ule
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Underfull \hbox (badness 7064) in paragraph at lines 2670--2672
[]\T1/pcr/m/n/10 opacity_init() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-ro
u-tine in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2674--2676
[]\T1/pcr/m/n/10 opacity_morel() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-
tion in mod-ule
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[1082]
Underfull \hbox (badness 10000) in paragraph at lines 2676--2678
[]\T1/pcr/m/n/10 open_boundary_apply_normal_flow()
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Underfull \hbox (badness 10000) in paragraph at lines 2676--2678
\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2686--2688
[]\T1/pcr/m/n/10 open_boundary_impose_normal_slope()
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Underfull \hbox (badness 10000) in paragraph at lines 2686--2688
\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2692--2694
[]\T1/pcr/m/n/10 open_boundary_register_restarts()
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\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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[]\T1/pcr/m/n/10 open_boundary_test_extern_uv() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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Underfull \hbox (badness 6708) in paragraph at lines 2708--2710
[]\T1/pcr/m/n/10 openmultilinecomment() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tra
n func-tion in
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Underfull \hbox (badness 10000) in paragraph at lines 2712--2714
[]\T1/pcr/m/n/10 optics_nbands() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-
tion in mod-ule
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Underfull \hbox (badness 10000) in paragraph at lines 2716--2718
[]\T1/pcr/m/n/10 overridewarninghasbeenissued() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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[]\T1/pcr/m/n/10 scm_cvmix_tests_surface_forcing_init()
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[]\T1/pcr/m/n/10 set_bbl_tke() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou
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n in mod-ule
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/10 for-
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[]\T1/pcr/m/n/10 set_v_at_u() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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n mod-ule
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[]\T1/pcr/m/n/10 slope_limiter() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-
tion in mod-ule
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tine in mod-ule
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[]\T1/pcr/m/n/10 sort_ml() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tin
e in mod-ule
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mod-ule nev-er-
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tine in mod-ule
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n func-tion in
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[]\T1/pcr/m/n/10 stokesmixing() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-ro
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[]\T1/pcr/m/n/10 strip_quotes() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-t
ion in mod-ule
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pe in mod-ule
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pe in mod-ule
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[1092]
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[]\T1/pcr/m/n/10 tdma6() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine 
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ne in mod-ule
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on in mod-ule
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[]\T1/pcr/m/n/10 test_data1d() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-ti
on in mod-ule
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[]\T1/pcr/m/n/10 test_data1di() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-t
ion in mod-ule
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[]\T1/pcr/m/n/10 test_fv_diff() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-t
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[]\T1/pcr/m/n/10 test_ifndp() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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ine in mod-ule re-
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pe in mod-ule
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[]\T1/pcr/m/n/10 time_string() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-ti
on in mod-ule
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[]\T1/pcr/m/n/10 totalstuff() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tio
n in mod-ule
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[]\T1/pcr/m/n/10 totaltands() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-
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[1093]
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[]\T1/pcr/m/n/10 tracer_hor_diff_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran ty
pe in mod-ule
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od-ule
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[]\T1/pcr/m/n/10 tracer_z_init() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-
tion in mod-ule
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[]\T1/pcr/m/n/10 transport_diag_ids \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran ty
pe in mod-ule
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[]\T1/pcr/m/n/10 tridiag_det() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou
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[]\T1/pcr/m/n/10 tridiagts() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-t
ine in mod-ule
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[]\T1/pcr/m/n/10 trim_for_ice() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-ro
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[]\T1/pcr/m/n/10 uhbt_to_ubt() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-ti
on in mod-ule
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ion in mod-ule
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[]\T1/pcr/m/n/10 unit_tests() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-
tine in mod-ule
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[]\T1/pcr/m/n/10 update_obc_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type in
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[]\T1/pcr/m/n/10 update_segment_tracer_reservoirs()
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\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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[]\T1/pcr/m/n/10 uppercase() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-tion
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[1094]
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[]\T1/pcr/m/n/10 user_ice_shelf_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran typ
e in mod-ule
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[]\T1/pcr/m/n/10 user_register_tracer_example() \T1/ptm/m/n/10 (\T1/ptm/m/it/10
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[]\T1/pcr/m/n/10 val_weights() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-ti
on in mod-ule
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[]\T1/pcr/m/n/10 varmix_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type in mod
-ule
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[]\T1/pcr/m/n/10 varmix_init() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou
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[]\T1/pcr/m/n/10 vert_fill_ts() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-ro
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[]\T1/pcr/m/n/10 verticalgrid_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran typ
e in mod-ule
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[]\T1/pcr/m/n/10 vertically_interpolate_diag_field()
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\T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-tine in mod-ule
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[]\T1/pcr/m/n/10 vertically_reintegrate_diag_field()
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[]\T1/pcr/m/n/10 vertvisc() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-ti
ne in mod-ule
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od-ule
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[]\T1/pcr/m/n/10 vertvisc_end() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-ro
u-tine in mod-ule
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[]\T1/pcr/m/n/10 vertvisc_type \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type in
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[]\T1/pcr/m/n/10 vhbt_to_vbt() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran func-ti
on in mod-ule
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[]\T1/pcr/m/n/10 wave_parameters_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran ty
pe in mod-ule
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[]\T1/pcr/m/n/10 wave_speed() \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran sub-rou-
tine in mod-ule
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[]\T1/pcr/m/n/10 wave_speed_cs \T1/ptm/m/n/10 (\T1/ptm/m/it/10 for-tran type in
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[1095]
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