mom_sponge mom_sponge::p2d mom_sponge::p3d mom_sponge::sponge_cs subroutine, public subroutine, public mom_sponge::initialize_sponge (Iresttime, int_height, G, param_file, CS, GV, Iresttime_i_mean, int_height_i_mean) initialize_sponge Iresttime Iresttime int_height int_height G G param_file param_file CS CS GV GV Iresttime_i_mean Iresttime_i_mean int_height_i_mean int_height_i_mean This subroutine determines the number of points which are within sponges in this computational domain. Only points that have positive values of Iresttime and which mask2dT indicates are ocean points are included in the sponges. It also stores the target interface heights. g The ocean's grid structure iresttime The inverse of the restoring time [T-1 ~> s-1]. int_height The interface heights to damp back toward [Z ~> m]. param_file A structure to parse for run-time parameters cs A pointer that is set to point to the control structure for this module gv The ocean's vertical grid structure iresttime_i_mean The inverse of the restoring time for int_height_i_mean The interface heights toward which to mom_error_handler::mom_error bfb_initialization::bfb_initialize_sponges_southonly dome2d_initialization::dome2d_initialize_sponges dome_initialization::dome_initialize_sponges mom_state_initialization::initialize_sponges_file isomip_initialization::isomip_initialize_sponges phillips_initialization::phillips_initialize_sponges subroutine, public subroutine, public mom_sponge::init_sponge_diags (Time, G, GV, US, diag, CS) init_sponge_diags Time Time G G GV GV US US diag diag CS CS This subroutine sets up diagnostics for the sponges. It is separate from initialize_sponge because it requires fields that are not readily available where initialize_sponge is called. time The current model time g The ocean's grid structure gv The ocean's vertical grid structure us A dimensional unit scaling type diag A structure that is used to regulate diagnostic output cs A pointer to the control structure for this module that is set by a previous call to initialize_sponge. subroutine, public subroutine, public mom_sponge::set_up_sponge_field (sp_val, f_ptr, G, nlay, CS, sp_val_i_mean) set_up_sponge_field sp_val sp_val f_ptr f_ptr G G nlay nlay CS CS sp_val_i_mean sp_val_i_mean This subroutine stores the reference profile for the variable whose address is given by f_ptr. nlay is the number of layers in this variable. g The ocean's grid structure sp_val The reference profiles of the quantity being registered. f_ptr a pointer to the field which will be damped nlay the number of layers in this quantity cs A pointer to the control structure for this module that is set by a previous call to initialize_sponge. sp_val_i_mean The i-mean reference value for mom_error_handler::is_root_pe mom_error_handler::mom_error dome_initialization::dome_initialize_sponges dome_tracer::initialize_dome_tracer rgc_tracer::initialize_rgc_tracer isomip_initialization::isomip_initialize_sponges user_tracer_example::user_initialize_tracer subroutine, public subroutine, public mom_sponge::set_up_sponge_ml_density (sp_val, G, CS, sp_val_i_mean) set_up_sponge_ml_density sp_val sp_val G G CS CS sp_val_i_mean sp_val_i_mean This subroutine stores the reference value for mixed layer density. It is handled differently from other values because it is only used in determining which layers can be inflated. g The ocean's grid structure sp_val The reference values of the mixed layer density [R ~> kg m-3] cs A pointer to the control structure for this module that is set by a previous call to initialize_sponge. sp_val_i_mean the reference values of the zonal mean mixed mom_error_handler::mom_error rgc_initialization::rgc_initialize_sponges subroutine, public subroutine, public mom_sponge::apply_sponge (h, dt, G, GV, US, ea, eb, CS, Rcv_ml) apply_sponge h h dt dt G G GV GV US US ea ea eb eb CS CS Rcv_ml Rcv_ml This subroutine applies damping to the layers thicknesses, mixed layer buoyancy, and a variety of tracers for every column where there is damping. g The ocean's grid structure gv The ocean's vertical grid structure us A dimensional unit scaling type h Layer thicknesses [H ~> m or kg m-2] dt The amount of time covered by this call [T ~> s]. ea An array to which the amount of fluid entrained eb An array to which the amount of fluid entrained cs A pointer to the control structure for this module that is set by a previous call to initialize_sponge. rcv_ml The coordinate density of the mixed layer [R ~> kg m-3]. mom_spatial_means::global_i_mean mom_error_handler::mom_error mom_diabatic_driver::layered_diabatic subroutine, public subroutine, public mom_sponge::sponge_end (CS) sponge_end CS CS This call deallocates any memory in the sponge control structure. cs A pointer to the control structure for this module that is set by a previous call to initialize_sponge. Implements sponge regions in isopycnal mode. By Robert Hallberg, March 1999-June 2000.This program contains the subroutines that implement sponge regions, in which the stratification and water mass properties are damped toward some profiles. There are three externally callable subroutines in this file.initialize_sponge determines the mapping from the model variables into the arrays of damped columns. This remapping is done for efficiency and to conserve memory. Only columns which have positive inverse damping times and which are deeper than a supplied depth are placed in sponges. The inverse damping time is also stored in this subroutine, and memory is allocated for all of the reference profiles which will subsequently be provided through calls to set_up_sponge_field. The first two arguments are a two-dimensional array containing the damping rates, and the interface heights to damp towards.set_up_sponge_field is called to provide a reference profile and the location of the field that will be damped back toward that reference profile. A third argument, the number of layers in the field is also provided, but this should always be nz.Apply_sponge damps all of the fields that have been registered with set_up_sponge_field toward their reference profiles. The four arguments are the thickness to be damped, the amount of time over which the damping occurs, and arrays to which the movement of fluid into a layer from above and below will be added. The effect on momentum of the sponge may be accounted for later using the movement of water recorded in these later arrays.