This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex 2020.10.15) 4 DEC 2020 23:25 entering extended mode restricted \write18 enabled. %&-line parsing enabled. **refman (./refman.tex LaTeX2e <2020-02-02> patch level 2 L3 programming layer <2020-02-14> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2019/12/20 v1.4l Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo File: bk10.clo 2019/12/20 v1.4l Standard LaTeX file (size option) ) \c@part=\count167 \c@chapter=\count168 \c@section=\count169 \c@subsection=\count170 \c@subsubsection=\count171 \c@paragraph=\count172 \c@subparagraph=\count173 \c@figure=\count174 \c@table=\count175 \abovecaptionskip=\skip47 \belowcaptionskip=\skip48 \bibindent=\dimen134 ) (/usr/share/texlive/texmf-dist/tex/latex/base/fixltx2e.sty Package: fixltx2e 2016/12/29 v2.1a fixes to LaTeX (obsolete) Applying: [2015/01/01] Old fixltx2e package on input line 46. Package fixltx2e Warning: fixltx2e is not required with releases after 2015 (fixltx2e) All fixes are now in the LaTeX kernel. (fixltx2e) See the latexrelease package for details. Already applied: [0000/00/00] Old fixltx2e package on input line 53. ) (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty Package: calc 2017/05/25 v4.3 Infix arithmetic (KKT,FJ) \calc@Acount=\count176 \calc@Bcount=\count177 \calc@Adimen=\dimen135 \calc@Bdimen=\dimen136 \calc@Askip=\skip49 \calc@Bskip=\skip50 LaTeX Info: Redefining \setlength on input line 80. LaTeX Info: Redefining \addtolength on input line 81. \calc@Ccount=\count178 \calc@Cskip=\skip51 ) (./doxygen.sty Package: doxygen (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty Package: alltt 1997/06/16 v2.0g defines alltt environment ) (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty Package: array 2019/08/31 v2.4l Tabular extension package (FMi) \col@sep=\dimen137 \ar@mcellbox=\box45 \extrarowheight=\dimen138 \NC@list=\toks14 \extratabsurround=\skip52 \backup@length=\skip53 \ar@cellbox=\box46 ) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty Package: float 2001/11/08 v1.3d Float enhancements (AL) \c@float@type=\count179 \float@exts=\toks15 \float@box=\box47 \@float@everytoks=\toks16 \@floatcapt=\box48 ) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty Package: ifthen 2014/09/29 v1.1c Standard LaTeX ifthen package (DPC) ) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty Package: verbatim 2019/11/10 v1.5r LaTeX2e package for verbatim enhancements \every@verbatim=\toks17 \verbatim@line=\toks18 \verbatim@in@stream=\read2 ) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty Package: xcolor 2016/05/11 v2.12 LaTeX color extensions (UK) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg File: color.cfg 2016/01/02 v1.6 sample color configuration ) Package xcolor Info: Driver file: pdftex.def on input line 225. (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def File: pdftex.def 2018/01/08 v1.0l Graphics/color driver for pdftex ) (/usr/share/texlive/texmf-dist/tex/latex/colortbl/colortbl.sty Package: colortbl 2020/01/04 v1.0e Color table columns (DPC) \everycr=\toks19 \minrowclearance=\skip54 ) \rownum=\count180 Package xcolor Info: Model `cmy' substituted by `cmy0' on input line 1348. Package xcolor Info: Model `hsb' substituted by `rgb' on input line 1352. Package xcolor Info: Model `RGB' extended on input line 1364. Package xcolor Info: Model `HTML' substituted by `rgb' on input line 1366. Package xcolor Info: Model `Hsb' substituted by `hsb' on input line 1367. Package xcolor Info: Model `tHsb' substituted by `hsb' on input line 1368. Package xcolor Info: Model `HSB' substituted by `hsb' on input line 1369. Package xcolor Info: Model `Gray' substituted by `gray' on input line 1370. Package xcolor Info: Model `wave' substituted by `hsb' on input line 1371. ) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty Package: longtable 2020/01/07 v4.13 Multi-page Table package (DPC) \LTleft=\skip55 \LTright=\skip56 \LTpre=\skip57 \LTpost=\skip58 \LTchunksize=\count181 \LTcapwidth=\dimen139 \LT@head=\box49 \LT@firsthead=\box50 \LT@foot=\box51 \LT@lastfoot=\box52 \LT@cols=\count182 \LT@rows=\count183 \c@LT@tables=\count184 \c@LT@chunks=\count185 \LT@p@ftn=\toks20 ) (/usr/share/texlive/texmf-dist/tex/latex/tabu/tabu.sty Package: tabu 2019/01/11 v2.9 - flexible LaTeX tabulars (FC+tabu-fixed) + inter mediate FMi (/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty Package: varwidth 2009/03/30 ver 0.92; Variable-width minipages \@vwid@box=\box53 \sift@deathcycles=\count186 \@vwid@loff=\dimen140 \@vwid@roff=\dimen141 ) \c@taburow=\count187 \tabu@nbcols=\count188 \tabu@cnt=\count189 \tabu@Xcol=\count190 \tabu@alloc=\count191 \tabu@nested=\count192 \tabu@target=\dimen142 \tabu@spreadtarget=\dimen143 \tabu@naturalX=\dimen144 \tabucolX=\dimen145 \tabu@Xsum=\dimen146 \extrarowdepth=\dimen147 \abovetabulinesep=\dimen148 \belowtabulinesep=\dimen149 \tabustrutrule=\dimen150 \tabu@thebody=\toks21 \tabu@footnotes=\toks22 \tabu@box=\box54 \tabu@arstrutbox=\box55 \tabu@hleads=\box56 \tabu@vleads=\box57 \tabu@cellskip=\skip59 ) (/usr/share/texlive/texmf-dist/tex/latex/tools/tabularx.sty Package: tabularx 2020/01/15 v2.11c `tabularx' package (DPC) \TX@col@width=\dimen151 \TX@old@table=\dimen152 \TX@old@col=\dimen153 \TX@target=\dimen154 \TX@delta=\dimen155 \TX@cols=\count193 \TX@ftn=\toks23 ) (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty Package: multirow 2019/05/31 v2.5 Span multiple rows of a table \multirow@colwidth=\skip60 \multirow@cntb=\count194 \multirow@dima=\skip61 \bigstrutjot=\dimen156 ) \xrefbox=\box58 \xreflength=\skip62 ) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjustbox.sty Package: adjustbox 2019/01/04 v1.2 Adjusting TeX boxes (trim, clip, ...) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty Package: xkeyval 2014/12/03 v2.7a package option processing (HA) (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex \XKV@toks=\toks24 \XKV@tempa@toks=\toks25 (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)) \XKV@depth=\count195 File: xkeyval.tex 2014/12/03 v2.7a key=value parser (HA) )) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjcalc.sty Package: adjcalc 2012/05/16 v1.1 Provides advanced setlength with multiple back -ends (calc, etex, pgfmath) ) (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/trimclip.sty Package: trimclip 2018/04/08 v1.1 Trim and clip general TeX material (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty Package: graphicx 2019/11/30 v1.2a Enhanced LaTeX Graphics (DPC,SPQR) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty Package: graphics 2019/11/30 v1.4a Standard LaTeX Graphics (DPC,SPQR) (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty Package: trig 2016/01/03 v1.10 sin cos tan (DPC) ) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg File: graphics.cfg 2016/06/04 v1.11 sample graphics configuration ) Package graphics Info: Driver file: pdftex.def on input line 105. ) \Gin@req@height=\dimen157 \Gin@req@width=\dimen158 ) (/usr/share/texlive/texmf-dist/tex/latex/collectbox/collectbox.sty Package: collectbox 2012/05/17 v0.4b Collect macro arguments as boxes \collectedbox=\box59 ) \tc@llx=\dimen159 \tc@lly=\dimen160 \tc@urx=\dimen161 \tc@ury=\dimen162 Package trimclip Info: Using driver 'tc-pdftex.def'. (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/tc-pdftex.def File: tc-pdftex.def 2019/01/04 v2.2 Clipping driver for pdftex )) \adjbox@Width=\dimen163 \adjbox@Height=\dimen164 \adjbox@Depth=\dimen165 \adjbox@Totalheight=\dimen166 \adjbox@pwidth=\dimen167 \adjbox@pheight=\dimen168 \adjbox@pdepth=\dimen169 \adjbox@ptotalheight=\dimen170 (/usr/share/texlive/texmf-dist/tex/latex/ifoddpage/ifoddpage.sty Package: ifoddpage 2016/04/23 v1.1 Conditionals for odd/even page detection \c@checkoddpage=\count196 )) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty Package: inputenc 2018/08/11 v1.3c Input encoding file \inpenc@prehook=\toks26 \inpenc@posthook=\toks27 ) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty Package: makeidx 2014/09/29 v1.0m Standard LaTeX package ) (/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty Package: multicol 2019/12/09 v1.8y multicolumn formatting (FMi) \c@tracingmulticols=\count197 \mult@box=\box60 \multicol@leftmargin=\dimen171 \c@unbalance=\count198 \c@collectmore=\count199 \doublecol@number=\count266 \multicoltolerance=\count267 \multicolpretolerance=\count268 \full@width=\dimen172 \page@free=\dimen173 \premulticols=\dimen174 \postmulticols=\dimen175 \multicolsep=\skip63 \multicolbaselineskip=\skip64 \partial@page=\box61 \last@line=\box62 \maxbalancingoverflow=\dimen176 \mult@rightbox=\box63 \mult@grightbox=\box64 \mult@gfirstbox=\box65 \mult@firstbox=\box66 \@tempa=\box67 \@tempa=\box68 \@tempa=\box69 \@tempa=\box70 \@tempa=\box71 \@tempa=\box72 \@tempa=\box73 \@tempa=\box74 \@tempa=\box75 \@tempa=\box76 \@tempa=\box77 \@tempa=\box78 \@tempa=\box79 \@tempa=\box80 \@tempa=\box81 \@tempa=\box82 \@tempa=\box83 \@tempa=\box84 \@tempa=\box85 \@tempa=\box86 \@tempa=\box87 \@tempa=\box88 \@tempa=\box89 \@tempa=\box90 \@tempa=\box91 \@tempa=\box92 \@tempa=\box93 \@tempa=\box94 \@tempa=\box95 \@tempa=\box96 \@tempa=\box97 \@tempa=\box98 \@tempa=\box99 \@tempa=\box100 \@tempa=\box101 \@tempa=\box102 \@tempa=\box103 \c@minrows=\count269 \c@columnbadness=\count270 \c@finalcolumnbadness=\count271 \last@try=\dimen177 \multicolovershoot=\dimen178 \multicolundershoot=\dimen179 \mult@nat@firstbox=\box104 \colbreak@box=\box105 \mc@col@check@num=\count272 ) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty Package: textcomp 2020/02/02 v2.0n Standard LaTeX package ) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/wasysym.sty Package: wasysym 2020/01/19 v2.4 Wasy-2 symbol support package \symwasy=\mathgroup4 LaTeX Font Info: Overwriting symbol font `wasy' in version `bold' (Font) U/wasy/m/n --> U/wasy/b/n on input line 93. ) (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty Package: fontenc 2020/02/11 v2.0o Standard LaTeX package ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/helvet.sty Package: helvet 2005/04/12 PSNFSS-v9.2a (WaS) ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/courier.sty Package: courier 2005/04/12 PSNFSS-v9.2a (WaS) ) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty Package: amssymb 2013/01/14 v3.01 AMS font symbols (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty Package: amsfonts 2013/01/14 v3.01 Basic AMSFonts support \@emptytoks=\toks28 \symAMSa=\mathgroup5 \symAMSb=\mathgroup6 LaTeX Font Info: Redeclaring math symbol \hbar on input line 98. LaTeX Font Info: Overwriting math alphabet `\mathfrak' in version `bold' (Font) U/euf/m/n --> U/euf/b/n on input line 106. )) (/usr/share/texlive/texmf-dist/tex/latex/sectsty/sectsty.sty Package: sectsty 2002/02/25 v2.0.2 Commands to change all sectional heading sty les LaTeX Warning: Command \underbar has changed. Check if current package is valid. LaTeX Warning: Command \underline has changed. Check if current package is valid. ) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty Package: geometry 2020/01/02 v5.9 Page Geometry (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty Package: ifvtex 2019/10/25 v1.7 ifvtex legacy package. Use iftex instead. (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty Package: iftex 2019/11/07 v1.0c TeX engine tests )) \Gm@cnth=\count273 \Gm@cntv=\count274 \c@Gm@tempcnt=\count275 \Gm@bindingoffset=\dimen180 \Gm@wd@mp=\dimen181 \Gm@odd@mp=\dimen182 \Gm@even@mp=\dimen183 \Gm@layoutwidth=\dimen184 \Gm@layoutheight=\dimen185 \Gm@layouthoffset=\dimen186 \Gm@layoutvoffset=\dimen187 \Gm@dimlist=\toks29 ) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty Package: fancyhdr 2019/01/31 v3.10 Extensive control of page headers and footer s \f@nch@headwidth=\skip65 \f@nch@O@elh=\skip66 \f@nch@O@erh=\skip67 \f@nch@O@olh=\skip68 \f@nch@O@orh=\skip69 \f@nch@O@elf=\skip70 \f@nch@O@erf=\skip71 \f@nch@O@olf=\skip72 \f@nch@O@orf=\skip73 ) (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty Package: natbib 2010/09/13 8.31b (PWD, AO) \bibhang=\skip74 \bibsep=\skip75 LaTeX Info: Redefining \cite on input line 694. \c@NAT@ctr=\count276 ) (/usr/share/texlive/texmf-dist/tex/latex/tocloft/tocloft.sty Package: tocloft 2017/08/31 v2.3i parameterised ToC, etc., typesetting Package tocloft Info: The document has chapter divisions on input line 51. \cftparskip=\skip76 \cftbeforetoctitleskip=\skip77 \cftaftertoctitleskip=\skip78 \cftbeforepartskip=\skip79 \cftpartnumwidth=\skip80 \cftpartindent=\skip81 \cftbeforechapskip=\skip82 \cftchapindent=\skip83 \cftchapnumwidth=\skip84 \cftbeforesecskip=\skip85 \cftsecindent=\skip86 \cftsecnumwidth=\skip87 \cftbeforesubsecskip=\skip88 \cftsubsecindent=\skip89 \cftsubsecnumwidth=\skip90 \cftbeforesubsubsecskip=\skip91 \cftsubsubsecindent=\skip92 \cftsubsubsecnumwidth=\skip93 \cftbeforeparaskip=\skip94 \cftparaindent=\skip95 \cftparanumwidth=\skip96 \cftbeforesubparaskip=\skip97 \cftsubparaindent=\skip98 \cftsubparanumwidth=\skip99 \cftbeforeloftitleskip=\skip100 \cftafterloftitleskip=\skip101 \cftbeforefigskip=\skip102 \cftfigindent=\skip103 \cftfignumwidth=\skip104 \c@lofdepth=\count277 \c@lotdepth=\count278 \cftbeforelottitleskip=\skip105 \cftafterlottitleskip=\skip106 \cftbeforetabskip=\skip107 \cfttabindent=\skip108 \cfttabnumwidth=\skip109 ) \@indexfile=\write3 \openout3 = `refman.idx'. Writing index file refman.idx (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty Package: amsmath 2020/01/20 v2.17e AMS math features \@mathmargin=\skip110 For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty Package: amstext 2000/06/29 v2.01 AMS text (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty File: amsgen.sty 1999/11/30 v2.0 generic functions \@emptytoks=\toks30 \ex@=\dimen188 )) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty Package: amsbsy 1999/11/29 v1.2d Bold Symbols \pmbraise@=\dimen189 ) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty Package: amsopn 2016/03/08 v2.02 operator names ) \inf@bad=\count279 LaTeX Info: Redefining \frac on input line 227. \uproot@=\count280 \leftroot@=\count281 LaTeX Info: Redefining \overline on input line 389. \classnum@=\count282 \DOTSCASE@=\count283 LaTeX Info: Redefining \ldots on input line 486. LaTeX Info: Redefining \dots on input line 489. LaTeX Info: Redefining \cdots on input line 610. \Mathstrutbox@=\box106 \strutbox@=\box107 \big@size=\dimen190 LaTeX Font Info: Redeclaring font encoding OML on input line 733. LaTeX Font Info: Redeclaring font encoding OMS on input line 734. \macc@depth=\count284 \c@MaxMatrixCols=\count285 \dotsspace@=\muskip16 \c@parentequation=\count286 \dspbrk@lvl=\count287 \tag@help=\toks31 \row@=\count288 \column@=\count289 \maxfields@=\count290 \andhelp@=\toks32 \eqnshift@=\dimen191 \alignsep@=\dimen192 \tagshift@=\dimen193 \tagwidth@=\dimen194 \totwidth@=\dimen195 \lineht@=\dimen196 \@envbody=\toks33 \multlinegap=\skip111 \multlinetaggap=\skip112 \mathdisplay@stack=\toks34 LaTeX Info: Redefining \[ on input line 2859. LaTeX Info: Redefining \] on input line 2860. ) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty Package: ifpdf 2019/10/25 v3.4 ifpdf legacy package. Use iftex instead. ) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty Package: hyperref 2020/01/14 v7.00d Hypertext links for LaTeX (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty Package: ltxcmds 2019/12/15 v1.24 LaTeX kernel commands for general use (HO) ) (/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty Package: pdftexcmds 2019/11/24 v0.31 Utility functions of pdfTeX for LuaTeX (HO ) (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty Package: infwarerr 2019/12/03 v1.5 Providing info/warning/error messages (HO) ) Package pdftexcmds Info: \pdf@primitive is available. Package pdftexcmds Info: \pdf@ifprimitive is available. Package pdftexcmds Info: \pdfdraftmode found. ) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty Package: kvsetkeys 2019/12/15 v1.18 Key value parser (HO) ) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty Package: kvdefinekeys 2019-12-19 v1.6 Define keys (HO) ) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty Package: pdfescape 2019/12/09 v1.15 Implements pdfTeX's escape features (HO) ) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty Package: hycolor 2020-01-27 v1.10 Color options for hyperref/bookmark (HO) ) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty Package: letltxmacro 2019/12/03 v1.6 Let assignment for LaTeX macros (HO) ) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty Package: auxhook 2019-12-17 v1.6 Hooks for auxiliary files (HO) ) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty Package: kvoptions 2019/11/29 v3.13 Key value format for package options (HO) ) \@linkdim=\dimen197 \Hy@linkcounter=\count291 \Hy@pagecounter=\count292 (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def File: pd1enc.def 2020/01/14 v7.00d Hyperref: PDFDocEncoding definition (HO) Now handling font encoding PD1 ... ... no UTF-8 mapping file for font encoding PD1 ) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty Package: intcalc 2019/12/15 v1.3 Expandable calculations with integers (HO) ) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty Package: etexcmds 2019/12/15 v1.7 Avoid name clashes with e-TeX commands (HO) ) \Hy@SavedSpaceFactor=\count293 \pdfmajorversion=\count294 Package hyperref Info: Hyper figures OFF on input line 4547. Package hyperref Info: Link nesting OFF on input line 4552. Package hyperref Info: Hyper index ON on input line 4555. Package hyperref Info: Plain pages OFF on input line 4562. Package hyperref Info: Backreferencing ON on input line 4565. Package hyperref Info: Implicit mode ON; LaTeX internals redefined. Package hyperref Info: Bookmarks ON on input line 4800. (/usr/share/texlive/texmf-dist/tex/latex/hyperref/backref.sty Package: backref 2020/01/14 v1.40 Bibliographical back referencing (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty Package: rerunfilecheck 2019/12/05 v1.9 Rerun checks for auxiliary files (HO) (/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty Package: atveryend 2019-12-11 v1.11 Hooks at the very end of document (HO) Package atveryend Info: \enddocument detected (standard20110627). ) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty Package: uniquecounter 2019/12/15 v1.4 Provide unlimited unique counter (HO) (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty Package: bigintcalc 2019/12/15 v1.5 Expandable calculations on big integers (HO ) )) Package uniquecounter Info: New unique counter `rerunfilecheck' on input line 2 86. )) \c@Hy@tempcnt=\count295 (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty \Urlmuskip=\muskip17 Package: url 2013/09/16 ver 3.4 Verb mode for urls, etc. ) LaTeX Info: Redefining \url on input line 5159. \XeTeXLinkMargin=\dimen198 (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty Package: bitset 2019/12/09 v1.3 Handle bit-vector datatype (HO) ) \Fld@menulength=\count296 \Field@Width=\dimen199 \Fld@charsize=\dimen256 Package hyperref Info: Hyper figures OFF on input line 6430. Package hyperref Info: Link nesting OFF on input line 6435. Package hyperref Info: Hyper index ON on input line 6438. Package hyperref Info: backreferencing ON on input line 6443. Package hyperref Info: Link coloring OFF on input line 6450. Package hyperref Info: Link coloring with OCG OFF on input line 6455. Package hyperref Info: PDF/A mode OFF on input line 6460. LaTeX Info: Redefining \ref on input line 6500. LaTeX Info: Redefining \pageref on input line 6504. (/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty Package: atbegshi 2019/12/05 v1.19 At begin shipout hook (HO) ) \Hy@abspage=\count297 \c@Item=\count298 \c@Hfootnote=\count299 ) Package hyperref Info: Driver: hpdftex. (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def File: hpdftex.def 2020/01/14 v7.00d Hyperref driver for pdfTeX \Fld@listcount=\count300 \c@bookmark@seq@number=\count301 \Hy@SectionHShift=\skip113 ) Package hyperref Info: Option `colorlinks' set `true' on input line 109. Package hyperref Info: Option `unicode' set `true' on input line 109. (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def File: puenc.def 2020/01/14 v7.00d Hyperref: PDF Unicode definition (HO) Now handling font encoding PU ... ... no UTF-8 mapping file for font encoding PU ) (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty Package: caption 2020/01/03 v3.4h Customizing captions (AR) (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty Package: caption3 2020/01/03 v1.8h caption3 kernel (AR) Package caption3 Info: TeX engine: e-TeX on input line 61. \captionmargin=\dimen257 \captionmargin@=\dimen258 \captionwidth=\dimen259 \caption@tempdima=\dimen260 \caption@indent=\dimen261 \caption@parindent=\dimen262 \caption@hangindent=\dimen263 Package caption Info: Standard document class detected. ) \c@caption@flags=\count302 \c@continuedfloat=\count303 Package caption Info: float package is loaded. Package caption Info: hyperref package is loaded. Package caption Info: longtable package is loaded. (/usr/share/texlive/texmf-dist/tex/latex/caption/ltcaption.sty Package: ltcaption 2018/08/26 v1.4a longtable captions (AR) )) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def File: l3backend-pdfmode.def 2020-02-03 L3 backend support: PDF mode \l__kernel_color_stack_int=\count304 \l__pdf_internal_box=\box108 ) (./refman.aux LaTeX Warning: Label `namespacemom__diag__mediator_downsampling' multiply defin ed. ) \openout1 = `refman.aux'. LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Checking defaults for TS1/cmr/m/n on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Checking defaults for PD1/pdf/m/n on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Checking defaults for PU/pdf/m/n on input line 121. LaTeX Font Info: ... okay on input line 121. LaTeX Font Info: Trying to load font information for T1+phv on input line 12 1. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd File: t1phv.fd 2001/06/04 scalable font definitions for T1/phv. ) LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 8.99994pt on input line 121. (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] \scratchcounter=\count305 \scratchdimen=\dimen264 \scratchbox=\box109 \nofMPsegments=\count306 \nofMParguments=\count307 \everyMPshowfont=\toks35 \MPscratchCnt=\count308 \MPscratchDim=\dimen265 \MPnumerator=\count309 \makeMPintoPDFobject=\count310 \everyMPtoPDFconversion=\toks36 ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty Package: epstopdf-base 2020-01-24 v2.11 Base part for package epstopdf Package epstopdf-base Info: Redefining graphics rule for `.eps' on input line 4 85. (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg File: epstopdf-sys.cfg 2010/07/13 v1.3 Configuration of (r)epstopdf for TeX Liv e )) *geometry* driver: auto-detecting *geometry* detected driver: pdftex *geometry* verbose mode - [ preamble ] result: * driver: pdftex * paper: letterpaper * layout: * layoutoffset:(h,v)=(0.0pt,0.0pt) * modes: twoside * h-part:(L,W,R)=(71.13188pt, 472.03123pt, 71.13188pt) * v-part:(T,H,B)=(71.13188pt, 652.70622pt, 71.13188pt) * \paperwidth=614.295pt * \paperheight=794.96999pt * \textwidth=472.03123pt * \textheight=652.70622pt * \oddsidemargin=-1.1381pt * \evensidemargin=-1.1381pt * \topmargin=-31.2056pt * \headheight=12.0pt * \headsep=18.06749pt * \topskip=10.0pt * \footskip=25.29494pt * \marginparwidth=125.0pt * \marginparsep=7.0pt * \columnsep=10.0pt * \skip\footins=9.0pt plus 4.0pt minus 2.0pt * \hoffset=0.0pt * \voffset=0.0pt * \mag=1000 * \@twocolumnfalse * \@twosidetrue * \@mparswitchtrue * \@reversemarginfalse * (1in=72.27pt=25.4mm, 1cm=28.453pt) Package backref Info: ** backref set up for natbib ** on input line 121. \AtBeginShipoutBox=\box110 Package hyperref Info: Link coloring ON on input line 121. (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty Package: nameref 2019/09/16 v2.46 Cross-referencing by name of section (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty Package: refcount 2019/12/15 v3.6 Data extraction from label references (HO) ) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty Package: gettitlestring 2019/12/15 v1.6 Cleanup title references (HO) ) \c@section@level=\count311 ) LaTeX Info: Redefining \ref on input line 121. LaTeX Info: Redefining \pageref on input line 121. LaTeX Info: Redefining \nameref on input line 121. (./refman.out) (./refman.out) \@outlinefile=\write4 \openout4 = `refman.out'. Package caption Info: Begin \AtBeginDocument code. Package caption Info: End \AtBeginDocument code. Package hyperref Info: Option `pageanchor' set `false' on input line 127. Package hyperref Info: Option `bookmarksnumbered' set `true' on input line 127. Package hyperref Info: Option `unicode' set `true' on input line 127. LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 12.9599pt on input line 132. LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 6.29996pt on input line 132. LaTeX Font Info: Trying to load font information for U+wasy on input line 13 2. (/usr/share/texlive/texmf-dist/tex/latex/wasysym/uwasy.fd File: uwasy.fd 2020/01/19 v2.4 Wasy-2 symbol font definitions ) LaTeX Font Info: Trying to load font information for U+msa on input line 132 . (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd File: umsa.fd 2013/01/14 v3.01 AMS symbols A ) LaTeX Font Info: Trying to load font information for U+msb on input line 132 . (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd File: umsb.fd 2013/01/14 v3.01 AMS symbols B ) LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 10.79993pt on input line 134. [1 {/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2 ] LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 22.39185pt on input line 139. LaTeX Font Info: Font shape `T1/phv/b/n' will be (Font) scaled to size 22.39185pt on input line 139. LaTeX Font Info: Font shape `T1/phv/bc/n' will be (Font) scaled to size 22.39185pt on input line 139. (./refman.toc LaTeX Font Info: Font shape `T1/phv/b/n' will be (Font) scaled to size 8.99994pt on input line 1. LaTeX Font Info: Font shape `T1/phv/b/n' will be (Font) scaled to size 6.29996pt on input line 1. [1 ] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71]) \tf@toc=\write5 \openout5 = `refman.toc'. [72] Package hyperref Info: Option `pageanchor' set `true' on input line 142. Chapter 1. LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 18.66588pt on input line 145. LaTeX Font Info: Font shape `T1/phv/b/n' will be (Font) scaled to size 18.66588pt on input line 145. LaTeX Font Info: Font shape `T1/phv/bc/n' will be (Font) scaled to size 18.66588pt on input line 145. LaTeX Font Info: Font shape `T1/phv/bc/n' will be (Font) scaled to size 6.29996pt on input line 145. (./index.tex LaTeX Font Info: Trying to load font information for T1+pcr on input line 3. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd File: t1pcr.fd 2001/06/04 font definitions for T1/pcr. ) LaTeX Font Info: Font shape `T1/phv/b/n' will be (Font) scaled to size 10.79993pt on input line 13. LaTeX Font Info: Font shape `T1/phv/bc/n' will be (Font) scaled to size 10.79993pt on input line 13. LaTeX Font Info: Trying to load font information for TS1+phv on input line 1 7. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd File: ts1phv.fd 2001/06/04 scalable font definitions for TS1/phv. ) LaTeX Font Info: Font shape `TS1/phv/m/n' will be (Font) scaled to size 8.99994pt on input line 17. ) [1 ] [2 ] Chapter 2. (./ALE.tex LaTeX Font Info: Font shape `T1/phv/b/n' will be (Font) scaled to size 12.9599pt on input line 1. LaTeX Font Info: Font shape `T1/phv/bc/n' will be (Font) scaled to size 12.9599pt on input line 1. LaTeX Font Warning: Font shape `U/wasy/b/n' in size <7> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. LaTeX Font Warning: Font shape `U/wasy/b/n' in size <5> not available (Font) Font shape `U/wasy/m/n' tried instead on input line 10. [3]) [4] Chapter 3. (./ALE_Timestep.tex File: remapping1.png Graphic file (type png) Package pdftex.def Info: remapping1.png used on input line 8. (pdftex.def) Requested size: 472.06274pt x 286.7781pt. [5 <./remapping1.png>] File: remapping2.png Graphic file (type png) Package pdftex.def Info: remapping2.png used on input line 15. (pdftex.def) Requested size: 472.06274pt x 280.28725pt. File: remapping3.png Graphic file (type png) Package pdftex.def Info: remapping3.png used on input line 22. (pdftex.def) Requested size: 269.94724pt x 326.38457pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [6 <./remapping2.png>]) [7 <./remapping3.png>] [8 ] Chapter 4. (./Baroclinic_Momentum_Equations.tex File: timestep_MOM6.png Graphic file (type png) Package pdftex.def Info: timestep_MOM6.png used on input line 10. (pdftex.def) Requested size: 472.06274pt x 254.32379pt. Underfull \vbox (badness 7326) has occurred while \output is active [] [9] File: timestep_ROMS.png Graphic file (type png) Package pdftex.def Info: timestep_ROMS.png used on input line 17. (pdftex.def) Requested size: 472.06274pt x 253.73372pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [10 <./timestep_MOM6.png>]) [11 <./timestep_ROMS.png>] [12 ] Chapter 5. (./Barotropic_Baroclinic_Coupling.tex LaTeX Font Info: Font shape `T1/phv/m/it' in size <10> not available (Font) Font shape `T1/phv/m/sl' tried instead on input line 22. LaTeX Font Info: Font shape `T1/phv/m/sl' will be (Font) scaled to size 8.99994pt on input line 22. [13] Overfull \hbox (21.47826pt too wide) in paragraph at lines 26--27 \T1/phv/m/n/10 However, A[]LE mod-els like M[]O[]M6 re-quire positive-definite, non-lin-ear con-ti-nu-ity solvers (M[]O[]M6 uses []). [] [14] File: h_PPM.png Graphic file (type png) Package pdftex.def Info: h_PPM.png used on input line 49. (pdftex.def) Requested size: 468.74837pt x 326.36603pt. [15] File: Newton_PPM.png Graphic file (type png) Package pdftex.def Info: Newton_PPM.png used on input line 53. (pdftex.def) Requested size: 375.13715pt x 326.36932pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [16 <./h_PPM.png>] [17 <./Newton_PPM.png>] File: bottom_drag.png Graphic file (type png) Package pdftex.def Info: bottom_drag.png used on input line 74. (pdftex.def) Requested size: 218.4854pt x 326.36256pt. Underfull \vbox (badness 4699) has occurred while \output is active [] [18] [19 <./bottom_drag.png>] File: bt_bc_thickness.png Graphic file (type png) Package pdftex.def Info: bt_bc_thickness.png used on input line 98. (pdftex.def) Requested size: 464.59468pt x 326.37776pt. [20]) [21 <./bt_bc_thickness.png>] [22 ] Chapter 6. (./Barotropic_Momentum_Equations.tex) [23] [24 ] Chapter 7. (./Discrete_Coriolis.tex [25]) [26] [27] [28 ] Chapter 8. (./Discrete_Grids.tex File: Arakawa_C_grid.png Graphic file (type png) Package pdftex.def Info: Arakawa_C_grid.png used on input line 6. (pdftex.def) Requested size: 472.05418pt x 314.70277pt. [29 <./Arakawa_C_grid.png>] File: Grid_metrics.png Graphic file (type png) Package pdftex.def Info: Grid_metrics.png used on input line 15. (pdftex.def) Requested size: 472.03435pt x 157.34477pt. LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 4.49997pt on input line 17. File: cell_3d.png Graphic file (type png) Package pdftex.def Info: cell_3d.png used on input line 24. (pdftex.def) Requested size: 364.44684pt x 326.3845pt. [30 <./Grid_metrics.png>]) [31 <./cell_3d.png>] [32 ] Chapter 9. (./Discrete_OBC.tex) [33] [34 ] Chapter 10. (./Discrete_PG.tex File: PG_loop.png Graphic file (type png) Package pdftex.def Info: PG_loop.png used on input line 12. (pdftex.def) Requested size: 472.04904pt x 279.08304pt. [35] [36 <./PG_loop.png>]) [37] [38 ] Chapter 11. (./Energetic_Consistency.tex) [39] [40 ] Chapter 12. (./Finite_Difference_Operators.tex) [41] [42 ] Chapter 13. (./General_Coordinate.tex) [43] [44] Chapter 14. (./Governing_Equations.tex [45 ]) [46] Chapter 15. (./Notation.tex) [47 ] [48 ] Chapter 16. (./PPM.tex File: ppm_arc.png Graphic file (type png) Package pdftex.def Info: ppm_arc.png used on input line 10. (pdftex.def) Requested size: 472.06274pt x 282.64757pt. Underfull \vbox (badness 5374) has occurred while \output is active [] [49] [50 <./ppm_arc.png>]) [51] [52 ] Chapter 17. (./Sea_Ice.tex) [53] [54 ] Chapter 18. (./Solar_Radiation.tex) [55] [56 ] Chapter 19. (./Specifics.tex Overfull \hbox (22.6984pt too wide) in paragraph at lines 2--2 \T1/phv/m/n/10 We here pro-vide more de-tails of the terms ap-pear-ing in the o cean model equa-tions de-scribed in [].[] [] LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 7.19995pt on input line 5. LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 5.39996pt on input line 5. [57]) [58] Chapter 20. (./Timestep_Overview.tex File: timesteps_4.png Graphic file (type png) Package pdftex.def Info: timesteps_4.png used on input line 5. (pdftex.def) Requested size: 371.3878pt x 326.35704pt. ) [59 <./timesteps_4.png>] [60 ] Chapter 21. (./Equation_of_State.tex [61]) [62] Chapter 22. (./Diagnostics.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 3. [63 ] [64] [65] [66]) [67] [68 ] Chapter 23. (./Domain_Decomposition.tex) [69] [70 ] Chapter 24. (./Global_Grids.tex) [71] [72 ] Chapter 25. (./Horizontal_Indexing.tex File: Arakawa_C_grid.png Graphic file (type png) Package pdftex.def Info: Arakawa_C_grid.png used on input line 8. (pdftex.def) Requested size: 472.05418pt x 314.70277pt. Underfull \vbox (badness 7981) has occurred while \output is active [] [73] File: Horizontal_NE_indexing_nonsym.png Graphic file (type png) Package pdftex.def Info: Horizontal_NE_indexing_nonsym.png used on input line 30. (pdftex.def) Requested size: 472.04843pt x 322.8202pt. [74] File: Horizontal_NE_indexing_sym.png Graphic file (type png) Package pdftex.def Info: Horizontal_NE_indexing_sym.png used on input line 37. (pdftex.def) Requested size: 472.03244pt x 324.78337pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [75 <./Horizontal_NE_indexing_nonsym.png>] Underfull \hbox (badness 10000) in paragraph at lines 54--55 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed) []:[]: D !$\ OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at h-points [] Overfull \hbox (16.7466pt too wide) in paragraph at lines 55--56 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%jsd[]:HI%jed, GV%ke) []:[] : h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Layer thickness [] [76 <./Horizontal_NE_indexing_sym.png>] Underfull \hbox (badness 10000) in paragraph at lines 61--62 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%jsd[]:HI%jed, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow [] Underfull \hbox (badness 10000) in paragraph at lines 67--68 []\T1/pcr/m/n/10 real, dimension(HI%isd[]:HI%ied, HI%JsdB[]:HI%JedB, GV%ke) []: []: h !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Zonal flow [] Overfull \hbox (16.7466pt too wide) in paragraph at lines 72--73 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB) []:[]: D q !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Depth at q-points [] Overfull \hbox (16.7466pt too wide) in paragraph at lines 73--74 []\T1/pcr/m/n/10 real, dimension(HI%IsdB[]:HI%IedB, HI%JsdB[]:HI%JedB, GV%ke) [ ]:[]: vort !$\OML/cmm/m/it/10 <$ \T1/pcr/m/n/10 Vertical [] Underfull \hbox (badness 1983) in paragraph at lines 89--90 []\T1/phv/m/n/10 Before the [] was in-tro-duced, this con-ver-sion was done use vari-ables in the [] ) [77] [78 ] Chapter 26. (./Parallel_IO.tex) [79] [80 ] Chapter 27. (./Regional_Grids.tex) [81] [82 ] Chapter 28. (./Runtime_Parameter_System.tex [83] [84]) [85] [86 ] Chapter 29. (./Testing.tex LaTeX Font Info: Font shape `T1/phv/bc/n' will be (Font) scaled to size 8.99994pt on input line 12. Underfull \hbox (badness 10000) detected at line 12 [][][] [] File: consortium.png Graphic file (type png) Package pdftex.def Info: consortium.png used on input line 20. (pdftex.def) Requested size: 331.74394pt x 326.3531pt. [87] [88 <./consortium.png>] Underfull \hbox (badness 10000) detected at line 73 [][][] [] File: Rotated_indices.png Graphic file (type png) Package pdftex.def Info: Rotated_indices.png used on input line 81. (pdftex.def) Requested size: 466.24268pt x 326.36987pt. [89] [90 <./Rotated_indices.png>]) [91] [92 ] Chapter 30. (./Vertical_Grids.tex) [93] [94 ] Chapter 31. (./CVMix_KPP.tex [95] Underfull \hbox (badness 10000) detected at line 10 [][][] [] ) [96] Chapter 32. (./Tracer_Advection.tex [97 ]) [98] Chapter 33. (./Discrete_Tracer.tex) [99 ] [100 ] Chapter 34. (./Horizontal_Diffusion.tex File: eddy_fluxes.png Graphic file (type png) Package pdftex.def Info: eddy_fluxes.png used on input line 9. (pdftex.def) Requested size: 472.06274pt x 250.78333pt. [101 <./eddy_fluxes.png>] File: shao0.png Graphic file (type png) Package pdftex.def Info: shao0.png used on input line 23. (pdftex.def) Requested size: 284.20163pt x 326.3582pt. [102 <./shao0.png>] File: shao1.png Graphic file (type png) Package pdftex.def Info: shao1.png used on input line 35. (pdftex.def) Requested size: 362.11858pt x 326.35936pt. File: shao2.png Graphic file (type png) Package pdftex.def Info: shao2.png used on input line 51. (pdftex.def) Requested size: 365.68413pt x 326.3731pt. LaTeX Font Info: Font shape `TS1/phv/b/n' will be (Font) scaled to size 8.99994pt on input line 52. [103 <./shao1.png>] [104 <./shao2.png>] File: shao3.png Graphic file (type png) Package pdftex.def Info: shao3.png used on input line 69. (pdftex.def) Requested size: 374.60416pt x 326.37387pt. File: shao4.png Graphic file (type png) Package pdftex.def Info: shao4.png used on input line 71. (pdftex.def) Requested size: 363.62567pt x 326.35403pt. [105 <./shao3.png>] File: shao5.png Graphic file (type png) Package pdftex.def Info: shao5.png used on input line 77. (pdftex.def) Requested size: 460.50838pt x 326.38531pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [106 <./shao4.png>] File: sbl1.png Graphic file (type png) Package pdftex.def Info: sbl1.png used on input line 87. (pdftex.def) Requested size: 445.09525pt x 326.35689pt. Underfull \vbox (badness 6825) has occurred while \output is active [] [107 <./shao5.png>] File: sbl2.png Graphic file (type png) Package pdftex.def Info: sbl2.png used on input line 94. (pdftex.def) Requested size: 445.09525pt x 326.35689pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [108 <./sbl1.png>]) [109 <./sbl2.png>] [110 ] Chapter 35. (./Passive_Tracers.tex) [111] [112 ] Chapter 36. (./Tracer_Fluxes.tex) [113] [114 ] Chapter 37. (./Tracer_Timestep.tex) [115] [116 ] Chapter 38. (./Tracer_Transport_Equations.tex File: PPM_1d.png Graphic file (type png) Package pdftex.def Info: PPM_1d.png used on input line 3. (pdftex.def) Requested size: 472.06274pt x 222.45956pt. [117 <./PPM_1d.png>] [118]) [119] [120 ] Chapter 39. (./Vertical_Diffusion.tex) [121] [122 ] Chapter 40. (./md__home_cermak_src_MOM6_8devrob_config_src_external_GFDL_ocean_BGC_README.t ex) [123] [124 ] Chapter 41. (./md__home_cermak_src_MOM6_8devrob_config_src_external_ODA_hooks_README.tex) [125] [126 ] Chapter 42. (./md__home_cermak_src_MOM6_8devrob_config_src_external_README.tex) [127] [128 ] Chapter 43. (./todo.tex [129]) [130] Chapter 44. (./namespaces.tex [131 ] Underfull \vbox (badness 6708) has occurred while \output is active [] [132] Underfull \vbox (badness 10000) has occurred while \output is active [] [133] [134] Underfull \vbox (badness 7667) has occurred while \output is active [] [135] Underfull \vbox (badness 6708) has occurred while \output is active [] [136] Underfull \hbox (badness 1038) in paragraph at lines 150--150 \T1/phv/m/n/10 This mod-ule con-tains rou-tines that im-ple-ment phys-i-cal fl uxes of trac-ers (e.[]g. due to sur- [] Underfull \vbox (badness 7667) has occurred while \output is active [] [137] [138]) [139] [140 ] Chapter 45. (./annotated.tex [141] Underfull \vbox (badness 10000) has occurred while \output is active [] [142] [143] Underfull \vbox (badness 5908) has occurred while \output is active [] [144] [145] Underfull \vbox (badness 6708) has occurred while \output is active [] [146] [147] [148] Underfull \vbox (badness 5908) has occurred while \output is active [] [149] Underfull \vbox (badness 5231) has occurred while \output is active [] [150] Underfull \vbox (badness 10000) has occurred while \output is active [] [151] Underfull \vbox (badness 6708) has occurred while \output is active [] [152]) [153] [154 ] Chapter 46. (./files.tex LaTeX Warning: Reference `MOM__surface__forcing__gfdl_8F90' on page 155 undefin ed on input line 3. LaTeX Warning: Reference `ocean__model__MOM_8F90' on page 155 undefined on inpu t line 4. LaTeX Warning: Reference `FMS__coupler__util_8F90' on page 155 undefined on inp ut line 6. LaTeX Warning: Reference `generic__tracer_8F90' on page 155 undefined on input line 7. LaTeX Warning: Reference `generic__tracer__utils_8F90' on page 155 undefined on input line 8. LaTeX Warning: Reference `kdtree_8f90' on page 155 undefined on input line 9. LaTeX Warning: Reference `ocean__da__core_8F90' on page 155 undefined on input line 10. LaTeX Warning: Reference `ocean__da__types_8F90' on page 155 undefined on input line 11. LaTeX Warning: Reference `write__ocean__obs_8F90' on page 155 undefined on inpu t line 12. LaTeX Warning: Reference `atmos__ocean__fluxes_8F90' on page 155 undefined on i nput line 13. LaTeX Warning: Reference `MESO__surface__forcing_8F90' on page 155 undefined on input line 14. LaTeX Warning: Reference `MOM__driver_8F90' on page 155 undefined on input line 15. LaTeX Warning: Reference `MOM__surface__forcing_8F90' on page 155 undefined on input line 16. LaTeX Warning: Reference `user__surface__forcing_8F90' on page 155 undefined on input line 17. LaTeX Warning: Reference `coord__adapt_8F90' on page 155 undefined on input lin e 18. LaTeX Warning: Reference `coord__hycom_8F90' on page 155 undefined on input lin e 19. LaTeX Warning: Reference `coord__rho_8F90' on page 155 undefined on input line 20. LaTeX Warning: Reference `coord__sigma_8F90' on page 155 undefined on input lin e 21. LaTeX Warning: Reference `coord__slight_8F90' on page 155 undefined on input li ne 22. LaTeX Warning: Reference `coord__zlike_8F90' on page 155 undefined on input lin e 23. LaTeX Warning: Reference `MOM__ALE_8F90' on page 155 undefined on input line 24 . LaTeX Warning: Reference `MOM__regridding_8F90' on page 155 undefined on input line 25. LaTeX Warning: Reference `MOM__remapping_8F90' on page 155 undefined on input l ine 26. LaTeX Warning: Reference `P1M__functions_8F90' on page 155 undefined on input l ine 27. LaTeX Warning: Reference `P3M__functions_8F90' on page 155 undefined on input l ine 28. LaTeX Warning: Reference `PCM__functions_8F90' on page 155 undefined on input l ine 29. LaTeX Warning: Reference `PLM__functions_8F90' on page 155 undefined on input l ine 30. LaTeX Warning: Reference `polynomial__functions_8F90' on page 155 undefined on input line 31. LaTeX Warning: Reference `PPM__functions_8F90' on page 155 undefined on input l ine 32. LaTeX Warning: Reference `PQM__functions_8F90' on page 155 undefined on input l ine 33. LaTeX Warning: Reference `regrid__consts_8F90' on page 155 undefined on input l ine 34. LaTeX Warning: Reference `regrid__edge__values_8F90' on page 155 undefined on i nput line 35. LaTeX Warning: Reference `regrid__interp_8F90' on page 155 undefined on input l ine 36. [155] LaTeX Warning: Reference `regrid__solvers_8F90' on page 156 undefined on input line 37. LaTeX Warning: Reference `MOM_8F90' on page 156 undefined on input line 38. LaTeX Warning: Reference `MOM__barotropic_8F90' on page 156 undefined on input line 39. LaTeX Warning: Reference `MOM__boundary__update_8F90' on page 156 undefined on input line 40. LaTeX Warning: Reference `MOM__checksum__packages_8F90' on page 156 undefined o n input line 41. LaTeX Warning: Reference `MOM__continuity_8F90' on page 156 undefined on input line 42. LaTeX Warning: Reference `MOM__continuity__PPM_8F90' on page 156 undefined on i nput line 43. LaTeX Warning: Reference `MOM__CoriolisAdv_8F90' on page 156 undefined on input line 44. LaTeX Warning: Reference `MOM__density__integrals_8F90' on page 156 undefined o n input line 45. LaTeX Warning: Reference `MOM__dynamics__split__RK2_8F90' on page 156 undefined on input line 46. LaTeX Warning: Reference `MOM__dynamics__unsplit_8F90' on page 156 undefined on input line 47. LaTeX Warning: Reference `MOM__dynamics__unsplit__RK2_8F90' on page 156 undefin ed on input line 48. LaTeX Warning: Reference `MOM__forcing__type_8F90' on page 156 undefined on inp ut line 49. LaTeX Warning: Reference `MOM__grid_8F90' on page 156 undefined on input line 5 0. LaTeX Warning: Reference `MOM__interface__heights_8F90' on page 156 undefined o n input line 51. LaTeX Warning: Reference `MOM__isopycnal__slopes_8F90' on page 156 undefined on input line 52. LaTeX Warning: Reference `MOM__open__boundary_8F90' on page 156 undefined on in put line 53. LaTeX Warning: Reference `MOM__PressureForce_8F90' on page 156 undefined on inp ut line 54. LaTeX Warning: Reference `MOM__PressureForce__FV_8F90' on page 156 undefined on input line 55. LaTeX Warning: Reference `MOM__PressureForce__Montgomery_8F90' on page 156 unde fined on input line 56. LaTeX Warning: Reference `MOM__transcribe__grid_8F90' on page 156 undefined on input line 57. LaTeX Warning: Reference `MOM__unit__tests_8F90' on page 156 undefined on input line 58. LaTeX Warning: Reference `MOM__variables_8F90' on page 156 undefined on input l ine 59. LaTeX Warning: Reference `MOM__verticalGrid_8F90' on page 156 undefined on inpu t line 60. LaTeX Warning: Reference `MOM__debugging_8F90' on page 156 undefined on input l ine 61. LaTeX Warning: Reference `MOM__diagnostics_8F90' on page 156 undefined on input line 62. LaTeX Warning: Reference `MOM__obsolete__diagnostics_8F90' on page 156 undefine d on input line 63. LaTeX Warning: Reference `MOM__obsolete__params_8F90' on page 156 undefined on input line 64. LaTeX Warning: Reference `MOM__PointAccel_8F90' on page 156 undefined on input line 65. LaTeX Warning: Reference `MOM__sum__output_8F90' on page 156 undefined on input line 66. LaTeX Warning: Reference `MOM__wave__speed_8F90' on page 156 undefined on input line 67. LaTeX Warning: Reference `MOM__wave__structure_8F90' on page 156 undefined on i nput line 68. LaTeX Warning: Reference `MOM__EOS_8F90' on page 156 undefined on input line 69 . LaTeX Warning: Reference `MOM__EOS__linear_8F90' on page 156 undefined on input line 70. LaTeX Warning: Reference `MOM__EOS__NEMO_8F90' on page 156 undefined on input l ine 71. LaTeX Warning: Reference `MOM__EOS__TEOS10_8F90' on page 156 undefined on input line 72. LaTeX Warning: Reference `MOM__EOS__UNESCO_8F90' on page 156 undefined on input line 73. LaTeX Warning: Reference `MOM__EOS__Wright_8F90' on page 156 undefined on input line 74. LaTeX Warning: Reference `MOM__TFreeze_8F90' on page 156 undefined on input lin e 75. LaTeX Warning: Reference `MOM__array__transform_8F90' on page 156 undefined on input line 76. LaTeX Warning: Reference `MOM__checksums_8F90' on page 156 undefined on input l ine 77. LaTeX Warning: Reference `MOM__coms_8F90' on page 156 undefined on input line 7 8. LaTeX Warning: Reference `MOM__constants_8F90' on page 156 undefined on input l ine 79. LaTeX Warning: Reference `MOM__cpu__clock_8F90' on page 156 undefined on input line 80. LaTeX Warning: Reference `MOM__diag__manager__wrapper_8F90' on page 156 undefin ed on input line 81. LaTeX Warning: Reference `MOM__diag__mediator_8F90' on page 156 undefined on in put line 82. LaTeX Warning: Reference `MOM__diag__remap_8F90' on page 156 undefined on input line 83. LaTeX Warning: Reference `MOM__diag__vkernels_8F90' on page 156 undefined on in put line 84. LaTeX Warning: Reference `MOM__document_8F90' on page 156 undefined on input li ne 85. LaTeX Warning: Reference `MOM__domains_8F90' on page 156 undefined on input lin e 86. LaTeX Warning: Reference `MOM__dyn__horgrid_8F90' on page 156 undefined on inpu t line 87. [156] LaTeX Warning: Reference `MOM__error__handler_8F90' on page 157 undefined on in put line 88. LaTeX Warning: Reference `MOM__file__parser_8F90' on page 157 undefined on inpu t line 89. LaTeX Warning: Reference `MOM__get__input_8F90' on page 157 undefined on input line 90. LaTeX Warning: Reference `MOM__hor__index_8F90' on page 157 undefined on input line 91. LaTeX Warning: Reference `MOM__horizontal__regridding_8F90' on page 157 undefin ed on input line 92. LaTeX Warning: Reference `MOM__intrinsic__functions_8F90' on page 157 undefined on input line 93. LaTeX Warning: Reference `MOM__io_8F90' on page 157 undefined on input line 94. LaTeX Warning: Reference `MOM__random_8F90' on page 157 undefined on input line 96. LaTeX Warning: Reference `MOM__restart_8F90' on page 157 undefined on input lin e 97. LaTeX Warning: Reference `MOM__safe__alloc_8F90' on page 157 undefined on input line 98. LaTeX Warning: Reference `MOM__spatial__means_8F90' on page 157 undefined on in put line 99. LaTeX Warning: Reference `MOM__string__functions_8F90' on page 157 undefined on input line 100. LaTeX Warning: Reference `MOM__time__manager_8F90' on page 157 undefined on inp ut line 101. LaTeX Warning: Reference `MOM__transform__FMS_8F90' on page 157 undefined on in put line 102. LaTeX Warning: Reference `MOM__unit__scaling_8F90' on page 157 undefined on inp ut line 103. LaTeX Warning: Reference `MOM__write__cputime_8F90' on page 157 undefined on in put line 104. LaTeX Warning: Reference `version__variable_8h' on page 157 undefined on input line 105. LaTeX Warning: Reference `MOM__ice__shelf_8F90' on page 157 undefined on input line 106. LaTeX Warning: Reference `MOM__ice__shelf__dynamics_8F90' on page 157 undefined on input line 107. LaTeX Warning: Reference `MOM__ice__shelf__initialize_8F90' on page 157 undefin ed on input line 108. LaTeX Warning: Reference `MOM__ice__shelf__state_8F90' on page 157 undefined on input line 109. LaTeX Warning: Reference `MOM__marine__ice_8F90' on page 157 undefined on input line 110. LaTeX Warning: Reference `user__shelf__init_8F90' on page 157 undefined on inpu t line 111. LaTeX Warning: Reference `MOM__coord__initialization_8F90' on page 157 undefine d on input line 112. LaTeX Warning: Reference `MOM__fixed__initialization_8F90' on page 157 undefine d on input line 113. LaTeX Warning: Reference `MOM__grid__initialize_8F90' on page 157 undefined on input line 114. LaTeX Warning: Reference `MOM__shared__initialization_8F90' on page 157 undefin ed on input line 115. LaTeX Warning: Reference `MOM__state__initialization_8F90' on page 157 undefine d on input line 116. LaTeX Warning: Reference `MOM__tracer__initialization__from__Z_8F90' on page 15 7 undefined on input line 117. LaTeX Warning: Reference `MOM__oda__driver_8F90' on page 157 undefined on input line 118. LaTeX Warning: Reference `MOM__hor__visc_8F90' on page 157 undefined on input l ine 119. LaTeX Warning: Reference `MOM__internal__tides_8F90' on page 157 undefined on i nput line 120. LaTeX Warning: Reference `MOM__lateral__mixing__coeffs_8F90' on page 157 undefi ned on input line 121. LaTeX Warning: Reference `MOM__MEKE_8F90' on page 157 undefined on input line 1 22. LaTeX Warning: Reference `MOM__MEKE__types_8F90' on page 157 undefined on input line 123. LaTeX Warning: Reference `MOM__mixed__layer__restrat_8F90' on page 157 undefine d on input line 124. LaTeX Warning: Reference `MOM__thickness__diffuse_8F90' on page 157 undefined o n input line 125. LaTeX Warning: Reference `MOM__tidal__forcing_8F90' on page 157 undefined on in put line 126. LaTeX Warning: Reference `MOM__ALE__sponge_8F90' on page 157 undefined on input line 127. LaTeX Warning: Reference `MOM__bkgnd__mixing_8F90' on page 157 undefined on inp ut line 128. LaTeX Warning: Reference `MOM__bulk__mixed__layer_8F90' on page 157 undefined o n input line 129. LaTeX Warning: Reference `MOM__CVMix__conv_8F90' on page 157 undefined on input line 130. LaTeX Warning: Reference `MOM__CVMix__ddiff_8F90' on page 157 undefined on inpu t line 131. LaTeX Warning: Reference `MOM__CVMix__KPP_8F90' on page 157 undefined on input line 132. LaTeX Warning: Reference `MOM__CVMix__shear_8F90' on page 157 undefined on inpu t line 133. LaTeX Warning: Reference `MOM__diabatic__aux_8F90' on page 157 undefined on inp ut line 134. LaTeX Warning: Reference `MOM__diabatic__driver_8F90' on page 157 undefined on input line 135. LaTeX Warning: Reference `MOM__diapyc__energy__req_8F90' on page 157 undefined on input line 136. LaTeX Warning: Reference `MOM__energetic__PBL_8F90' on page 157 undefined on in put line 137. LaTeX Warning: Reference `MOM__entrain__diffusive_8F90' on page 157 undefined o n input line 138. LaTeX Warning: Reference `MOM__full__convection_8F90' on page 157 undefined on input line 139. LaTeX Warning: Reference `MOM__geothermal_8F90' on page 157 undefined on input line 140. [157] LaTeX Warning: Reference `MOM__internal__tide__input_8F90' on page 158 undefine d on input line 141. LaTeX Warning: Reference `MOM__kappa__shear_8F90' on page 158 undefined on inpu t line 142. LaTeX Warning: Reference `MOM__opacity_8F90' on page 158 undefined on input lin e 143. LaTeX Warning: Reference `MOM__regularize__layers_8F90' on page 158 undefined o n input line 144. LaTeX Warning: Reference `MOM__set__diffusivity_8F90' on page 158 undefined on input line 145. LaTeX Warning: Reference `MOM__set__viscosity_8F90' on page 158 undefined on in put line 146. LaTeX Warning: Reference `MOM__sponge_8F90' on page 158 undefined on input line 147. LaTeX Warning: Reference `MOM__tidal__mixing_8F90' on page 158 undefined on inp ut line 148. LaTeX Warning: Reference `MOM__vert__friction_8F90' on page 158 undefined on in put line 149. LaTeX Warning: Reference `advection__test__tracer_8F90' on page 158 undefined o n input line 150. LaTeX Warning: Reference `boundary__impulse__tracer_8F90' on page 158 undefined on input line 151. LaTeX Warning: Reference `DOME__tracer_8F90' on page 158 undefined on input lin e 152. LaTeX Warning: Reference `dye__example_8F90' on page 158 undefined on input lin e 153. LaTeX Warning: Reference `dyed__obc__tracer_8F90' on page 158 undefined on inpu t line 154. LaTeX Warning: Reference `ideal__age__example_8F90' on page 158 undefined on in put line 155. LaTeX Warning: Reference `ISOMIP__tracer_8F90' on page 158 undefined on input l ine 156. LaTeX Warning: Reference `MOM__generic__tracer_8F90' on page 158 undefined on i nput line 157. LaTeX Warning: Reference `MOM__lateral__boundary__diffusion_8F90' on page 158 u ndefined on input line 158. LaTeX Warning: Reference `MOM__neutral__diffusion_8F90' on page 158 undefined o n input line 159. LaTeX Warning: Reference `MOM__OCMIP2__CFC_8F90' on page 158 undefined on input line 160. LaTeX Warning: Reference `MOM__offline__aux_8F90' on page 158 undefined on inpu t line 161. LaTeX Warning: Reference `MOM__offline__main_8F90' on page 158 undefined on inp ut line 162. LaTeX Warning: Reference `MOM__tracer__advect_8F90' on page 158 undefined on in put line 163. LaTeX Warning: Reference `MOM__tracer__diabatic_8F90' on page 158 undefined on input line 164. LaTeX Warning: Reference `MOM__tracer__flow__control_8F90' on page 158 undefine d on input line 165. LaTeX Warning: Reference `MOM__tracer__hor__diff_8F90' on page 158 undefined on input line 166. LaTeX Warning: Reference `MOM__tracer__registry_8F90' on page 158 undefined on input line 167. LaTeX Warning: Reference `MOM__tracer__Z__init_8F90' on page 158 undefined on i nput line 168. LaTeX Warning: Reference `oil__tracer_8F90' on page 158 undefined on input line 169. LaTeX Warning: Reference `pseudo__salt__tracer_8F90' on page 158 undefined on i nput line 170. LaTeX Warning: Reference `RGC__tracer_8F90' on page 158 undefined on input line 171. LaTeX Warning: Reference `tracer__example_8F90' on page 158 undefined on input line 172. LaTeX Warning: Reference `adjustment__initialization_8F90' on page 158 undefine d on input line 173. LaTeX Warning: Reference `baroclinic__zone__initialization_8F90' on page 158 un defined on input line 174. LaTeX Warning: Reference `basin__builder_8F90' on page 158 undefined on input l ine 175. LaTeX Warning: Reference `benchmark__initialization_8F90' on page 158 undefined on input line 176. LaTeX Warning: Reference `BFB__initialization_8F90' on page 158 undefined on in put line 177. LaTeX Warning: Reference `BFB__surface__forcing_8F90' on page 158 undefined on input line 178. LaTeX Warning: Reference `circle__obcs__initialization_8F90' on page 158 undefi ned on input line 179. LaTeX Warning: Reference `dense__water__initialization_8F90' on page 158 undefi ned on input line 180. LaTeX Warning: Reference `DOME2d__initialization_8F90' on page 158 undefined on input line 181. LaTeX Warning: Reference `DOME__initialization_8F90' on page 158 undefined on i nput line 182. LaTeX Warning: Reference `dumbbell__initialization_8F90' on page 158 undefined on input line 183. LaTeX Warning: Reference `dumbbell__surface__forcing_8F90' on page 158 undefine d on input line 184. LaTeX Warning: Reference `dyed__channel__initialization_8F90' on page 158 undef ined on input line 185. LaTeX Warning: Reference `dyed__obcs__initialization_8F90' on page 158 undefine d on input line 186. LaTeX Warning: Reference `external__gwave__initialization_8F90' on page 158 und efined on input line 187. LaTeX Warning: Reference `Idealized__Hurricane_8F90' on page 158 undefined on i nput line 188. LaTeX Warning: Reference `ISOMIP__initialization_8F90' on page 158 undefined on input line 189. LaTeX Warning: Reference `Kelvin__initialization_8F90' on page 158 undefined on input line 190. LaTeX Warning: Reference `lock__exchange__initialization_8F90' on page 158 unde fined on input line 191. LaTeX Warning: Reference `MOM__controlled__forcing_8F90' on page 158 undefined on input line 192. LaTeX Warning: Reference `MOM__wave__interface_8F90' on page 158 undefined on i nput line 193. LaTeX Warning: Reference `Neverworld__initialization_8F90' on page 158 undefine d on input line 194. [158] LaTeX Warning: Reference `Phillips__initialization_8F90' on page 159 undefined on input line 195. LaTeX Warning: Reference `RGC__initialization_8F90' on page 159 undefined on in put line 196. LaTeX Warning: Reference `Rossby__front__2d__initialization_8F90' on page 159 u ndefined on input line 197. LaTeX Warning: Reference `SCM__CVMix__tests_8F90' on page 159 undefined on inpu t line 198. LaTeX Warning: Reference `seamount__initialization_8F90' on page 159 undefined on input line 199. LaTeX Warning: Reference `shelfwave__initialization_8F90' on page 159 undefined on input line 200. LaTeX Warning: Reference `sloshing__initialization_8F90' on page 159 undefined on input line 201. LaTeX Warning: Reference `soliton__initialization_8F90' on page 159 undefined o n input line 202. LaTeX Warning: Reference `supercritical__initialization_8F90' on page 159 undef ined on input line 203. LaTeX Warning: Reference `tidal__bay__initialization_8F90' on page 159 undefine d on input line 204. LaTeX Warning: Reference `user__change__diffusivity_8F90' on page 159 undefined on input line 205. LaTeX Warning: Reference `user__initialization_8F90' on page 159 undefined on i nput line 206. LaTeX Warning: Reference `user__revise__forcing_8F90' on page 159 undefined on input line 207. ) [159] [160 ] Chapter 47. (./namespaceadjustment__initialization.tex LaTeX Font Info: Font shape `T1/phv/m/n' will be (Font) scaled to size 8.09995pt on input line 10. LaTeX Font Info: Font shape `T1/phv/m/it' in size <9> not available (Font) Font shape `T1/phv/m/sl' tried instead on input line 10. LaTeX Font Info: Font shape `T1/phv/m/sl' will be (Font) scaled to size 8.09995pt on input line 10. LaTeX Font Info: Font shape `TS1/phv/m/it' in size <9> not available (Font) Font shape `TS1/phv/m/sl' tried instead on input line 18. LaTeX Font Info: Font shape `TS1/phv/m/sl' will be (Font) scaled to size 8.09995pt on input line 18. LaTeX Font Info: Font shape `T1/pcr/m/it' in size <8> not available (Font) Font shape `T1/pcr/m/sl' tried instead on input line 26. LaTeX Font Info: Font shape `T1/pcr/m/it' in size <7> not available (Font) Font shape `T1/pcr/m/sl' tried instead on input line 26. [161] [162] [163] [164] [165] Underfull \vbox (badness 10000) has occurred while \output is active [] [166]) (./namespaceadvection__test__tracer.tex [167] Underfull \hbox (badness 10000) detected at line 64 [][][] [] [168] [169] [170] [171] [172] Underfull \vbox (badness 10000) has occurred while \output is active [] [173] [174]) (./namespaceatmos__ocean__fluxes__mod.tex [175] [176]) (./namespacebaroclinic__zone__initialization.tex [177] [178] [179]) (./namespacebasin__builder.tex [180] [181] [182] [183] Underfull \vbox (badness 10000) has occurred while \output is active [] [184] [185] Overfull \vbox (26.22467pt too high) has occurred while \output is active [] [186] [187] [188] [189] [190]) (./namespacebenchmark__initialization.tex [191] [192] [193] [194] [195] [196]) (./namespacebfb__initialization.tex [197] Overfull \vbox (6.91788pt too high) has occurred while \output is active [] [198] [199] [200] [201]) (./namespacebfb__surface__forcing.tex [202] [203] [204] [205]) (./namespaceboundary__impulse__tracer.tex [206] [207] Underfull \hbox (badness 10000) detected at line 75 [][][] [] [208] [209] [210] [211] [212] Overfull \vbox (16.42203pt too high) has occurred while \output is active [] [213] [214]) (./namespacecircle__obcs__initialization.tex [215] Underfull \vbox (badness 10000) has occurred while \output is active [] [216]) (./namespacecoord__adapt.tex [217] [218] Underfull \vbox (badness 10000) has occurred while \output is active [] [219] [220] [221]) (./namespacecoord__hycom.tex [222] Overfull \vbox (63.99036pt too high) has occurred while \output is active [] [223] [224] [225]) (./namespacecoord__rho.tex [226] [227] [228] [229] [230] Underfull \vbox (badness 10000) has occurred while \output is active [] [231] [232] [233] Overfull \vbox (8.41132pt too high) has occurred while \output is active [] [234] [235]) (./namespacecoord__sigma.tex [236] [237] [238]) (./namespacecoord__slight.tex Underfull \hbox (badness 5316) in paragraph at lines 18--19 []\T1/phv/m/n/10 subroutine, pub-lic [] (CS, max[]_[]interface[]_[]depths, max[ ]_[]layer[]_[]thickness, min[]_[]thickness, [] Underfull \hbox (badness 940) in paragraph at lines 18--19 \T1/phv/m/n/10 compressibility[]_[]fraction, dz[]_[]ml[]_[]min, nz[]_[]fixed[]_ []surface, Rho[]_[][]M[]L[]_[]avg[]_[]depth, nlay[]_[][]M[]L[]_[]offset, fix[]_ []haloclines, [] [239] [240] Underfull \vbox (badness 10000) has occurred while \output is active [] [241] Underfull \vbox (badness 10000) has occurred while \output is active [] [242] Underfull \vbox (badness 10000) has occurred while \output is active [] [243] [244] [245] [246] Underfull \vbox (badness 10000) has occurred while \output is active [] [247] Underfull \vbox (badness 10000) has occurred while \output is active [] [248] [249] [250]) (./namespacecoord__zlike.tex [251] [252] [253] [254]) (./namespacedense__water__initialization.tex [255] [256] Underfull \vbox (badness 10000) has occurred while \output is active [] [257] Underfull \vbox (badness 10000) has occurred while \output is active [] [258] [259] [260]) (./namespacedome2d__initialization.tex [261] [262] Underfull \vbox (badness 10000) has occurred while \output is active [] [263] [264] Underfull \vbox (badness 10000) has occurred while \output is active [] [265] Overfull \vbox (16.8857pt too high) has occurred while \output is active [] [266] [267] Overfull \vbox (11.34378pt too high) has occurred while \output is active [] [268]) (./namespacedome__initialization.tex [269] [270] [271] [272] [273] [274] Underfull \vbox (badness 10000) has occurred while \output is active [] [275]) (./namespacedome__tracer.tex [276] [277] [278] [279] [280] [281] Underfull \vbox (badness 10000) has occurred while \output is active [] [282] [283]) (./namespacedumbbell__initialization.tex [284] Underfull \vbox (badness 10000) has occurred while \output is active [] [285] [286] Underfull \vbox (badness 10000) has occurred while \output is active [] [287] [288] [289] [290]) (./namespacedumbbell__surface__forcing.tex [291] Overfull \vbox (36.78252pt too high) has occurred while \output is active [] [292] [293] [294] [295]) (./namespacedyed__channel__initialization.tex [296] [297] [298] [299] [300]) (./namespacedyed__obc__tracer.tex [301] [302] [303] [304] [305] [306] [307]) (./namespacedyed__obcs__initialization.tex [308] [309]) (./namespaceexternal__gwave__initialization.tex [310]) (./namespaceg__tracer__utils.tex [311] [312] [313] Overfull \vbox (37.85315pt too high) has occurred while \output is active [] [314] [315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325]) (./namespacegeneric__tracer.tex [326] [327] [328] [329] [330] [331] [332] [333]) (./namespaceideal__age__example.tex [334] [335] Underfull \hbox (badness 10000) detected at line 99 [][][] [] [336] [337] [338] [339] Underfull \vbox (badness 10000) has occurred while \output is active [] [340] [341] [342] Underfull \vbox (badness 10000) has occurred while \output is active [] [343]) (./namespaceidealized__hurricane.tex [344] [345] Underfull \vbox (badness 10000) has occurred while \output is active [] [346] [347] [348] [349] Underfull \vbox (badness 10000) has occurred while \output is active [] [350] [351] Underfull \vbox (badness 10000) has occurred while \output is active [] [352] Underfull \vbox (badness 10000) has occurred while \output is active [] [353]) (./namespaceisomip__initialization.tex Overfull \hbox (53.15218pt too wide) in paragraph at lines 8--8 []\T1/phv/m/n/10 See this pa-per for details[]: [][]\T1/pcr/m/n/10 http[]://www .[]geosci-model-dev-discuss.[]net/8/9859/2015/gmdd-8-9859-2015.[] [] [354] [355] Underfull \vbox (badness 10000) has occurred while \output is active [] [356] Underfull \vbox (badness 10000) has occurred while \output is active [] [357] [358] [359] Underfull \vbox (badness 10000) has occurred while \output is active [] [360] [361] [362] [363] [364]) (./namespaceisomip__tracer.tex [365] [366] Underfull \vbox (badness 10000) has occurred while \output is active [] [367] [368] [369] [370] [371]) (./namespacekdtree.tex [372]) (./namespacekelvin__initialization.tex [373] [374] [375] Underfull \vbox (badness 10000) has occurred while \output is active [] [376] Underfull \vbox (badness 10000) has occurred while \output is active [] [377] [378]) (./namespacelock__exchange__initialization.tex [379] [380]) (./namespacemeso__surface__forcing.tex [381] [382] Underfull \vbox (badness 10000) has occurred while \output is active [] [383] Underfull \vbox (badness 10000) has occurred while \output is active [] [384]) (./namespacemom.tex [385] Underfull \hbox (badness 10000) detected at line 10 [][][] [] [386] [387] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \vbox (badness 10000) has occurred while \output is active [] [396] Underfull \vbox (badness 10000) has occurred while \output is active [] [397] Underfull \vbox (badness 10000) has occurred while \output is active [] [398] Underfull \vbox (badness 10000) has occurred while \output is active [] [399] [400] [401] [402] [403] [404] Underfull \vbox (badness 10000) has occurred while \output is active [] [405] Underfull \vbox (badness 10000) has occurred while \output is active [] [406] Underfull \vbox (badness 10000) has occurred while \output is active [] [407] Underfull \vbox (badness 10000) has occurred while \output is active [] [408] Underfull \vbox (badness 10000) has occurred while \output is active [] [409] Underfull \vbox (badness 10000) has occurred while \output is active [] [410] Underfull \vbox (badness 10000) has occurred while \output is active [] [411] Underfull \vbox (badness 10000) has occurred while \output is active [] [412] Underfull \vbox (badness 10000) has occurred while \output is active [] [413] Underfull \vbox (badness 10000) has occurred while \output is active [] [414] Underfull \vbox (badness 10000) has occurred while \output is active [] [415] Underfull \vbox (badness 10000) has occurred while \output is active [] [416] Underfull \vbox (badness 10000) has occurred while \output is active [] [417] [418] [419] Underfull \hbox (badness 10000) detected at line 2259 [][][] [] [420] [421] [422] [423] [424] Underfull \vbox (badness 10000) has occurred while \output is active [] [425] Underfull \vbox (badness 10000) has occurred while \output is active [] [426] Underfull \vbox (badness 10000) has occurred while \output is active [] [427] Underfull \vbox (badness 10000) has occurred while \output is active [] [428] Underfull \vbox (badness 10000) has occurred while \output is active [] [429] [430] [431] Underfull \vbox (badness 10000) has occurred while \output is active [] [432] [433] [434] Underfull \vbox (badness 10000) has occurred while \output is active [] [435] [436] [437] Underfull \vbox (badness 10000) has occurred while \output is active [] [438] [439] Underfull \vbox (badness 10000) has occurred while \output is active [] [440]) (./namespacemom__ale.tex [441] [442] Underfull \vbox (badness 10000) has occurred while \output is active [] [443] [444] [445] [446] [447] Overfull \vbox (24.87663pt too high) has occurred while \output is active [] [448] [449] [450] [451] [452] [453] [454] [455] [456] Underfull \vbox (badness 10000) has occurred while \output is active [] [457] Underfull \hbox (badness 10000) in paragraph at lines 1065--1066 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional [] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \vbox (badness 10000) has occurred while \output is active [] [467] [468] [469] [470]) (./namespacemom__ale__sponge.tex [471] [472] Overfull \vbox (10.4989pt too high) has occurred while \output is active [] [473] [474] Underfull \vbox (badness 10000) has occurred while \output is active [] [475] Underfull \vbox (badness 10000) has occurred while \output is active [] [476] Underfull \hbox (badness 10000) detected at line 373 [][][] [] [477] [478] [479] Underfull \vbox (badness 10000) has occurred while \output is active [] [480] [481] [482] Underfull \vbox (badness 10000) has occurred while \output is active [] [483] [484] Underfull \vbox (badness 10000) has occurred while \output is active [] [485] [486] Underfull \vbox (badness 10000) has occurred while \output is active [] [487] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 1224--1225 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [] [488] Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 1292--1293 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [] [489] [490] Underfull \hbox (badness 10000) in paragraph at lines 1413--1414 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), target \T1/pcr/m/sl/8 p[]_[]new [] [491]) (./namespacemom__array__transform.tex [492] [493] [494] [495] [496] [497] Underfull \vbox (badness 10000) has occurred while \output is active [] [498] [499] Underfull \vbox (badness 10000) has occurred while \output is active [] [500] [501] [502]) (./namespacemom__barotropic.tex [503] [504] [505] [506] Overfull \vbox (56.21756pt too high) has occurred while \output is active [] [507] [508] [509] [510] Underfull \vbox (badness 10000) has occurred while \output is active [] [511] Underfull \vbox (badness 10000) has occurred while \output is active [] [512] [513] [514] Underfull \vbox (badness 10000) has occurred while \output is active [] [515] [516] Underfull \vbox (badness 10000) has occurred while \output is active [] [517] Underfull \vbox (badness 10000) has occurred while \output is active [] [518] Underfull \vbox (badness 10000) has occurred while \output is active [] [519] Underfull \vbox (badness 10000) has occurred while \output is active [] [520] Underfull \vbox (badness 10000) has occurred while \output is active [] [521] Underfull \vbox (badness 10000) has occurred while \output is active [] [522] Underfull \vbox (badness 10000) has occurred while \output is active [] [523] [524] [525] [526] [527] Underfull \vbox (badness 10000) has occurred while \output is active [] [528] Underfull \vbox (badness 10000) has occurred while \output is active [] [529] Underfull \vbox (badness 10000) has occurred while \output is active [] [530] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 1918--1919 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out) \T1/pcr/m/sl/8 accel[]_[] [] [531] [532] [533] Underfull \vbox (badness 10000) has occurred while \output is active [] [534] Underfull \vbox (badness 10000) has occurred while \output is active [] [535] Underfull \vbox (badness 10000) has occurred while \output is active [] [536] Underfull \vbox (badness 10000) has occurred while \output is active [] [537] Underfull \vbox (badness 10000) has occurred while \output is active [] [538] Underfull \vbox (badness 10000) has occurred while \output is active [] [539] Underfull \vbox (badness 10000) has occurred while \output is active [] [540] Underfull \vbox (badness 10000) has occurred while \output is active [] [541] Underfull \vbox (badness 10000) has occurred while \output is active [] [542] Underfull \vbox (badness 10000) has occurred while \output is active [] [543] Underfull \vbox (badness 10000) has occurred while \output is active [] [544] Underfull \vbox (badness 10000) has occurred while \output is active [] [545] Underfull \vbox (badness 10000) has occurred while \output is active [] [546] Underfull \vbox (badness 10000) has occurred while \output is active [] [547] Underfull \vbox (badness 10000) has occurred while \output is active [] [548] Underfull \vbox (badness 10000) has occurred while \output is active [] [549] Underfull \vbox (badness 10000) has occurred while \output is active [] [550] Underfull \vbox (badness 10000) has occurred while \output is active [] [551] Underfull \vbox (badness 10000) has occurred while \output is active [] [552] Underfull \vbox (badness 10000) has occurred while \output is active [] [553] Underfull \vbox (badness 10000) has occurred while \output is active [] [554] Underfull \vbox (badness 10000) has occurred while \output is active [] [555] Underfull \vbox (badness 10000) has occurred while \output is active [] [556] Underfull \vbox (badness 10000) has occurred while \output is active [] [557] Underfull \vbox (badness 10000) has occurred while \output is active [] [558] Underfull \vbox (badness 10000) has occurred while \output is active [] [559] Underfull \vbox (badness 10000) has occurred while \output is active [] [560] [561] Underfull \hbox (badness 10000) detected at line 4343 [][][] [] [562] Underfull \hbox (badness 10000) detected at line 4390 [][][] [] [563] [564] [565] Underfull \hbox (badness 10000) detected at line 4569 [][][] [] [566] Underfull \hbox (badness 10000) detected at line 4618 [][][] [] [567] [568] [569] Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([]), dimension( ms %isdw-1[]: ms %iedw, ms %jsdw[]: ms %j edw), [] Underfull \hbox (badness 10000) in paragraph at lines 4893--4894 | \T1/pcr/m/n/8 type([]), dimension( ms %isdw[]: ms %iedw, ms %jsdw-1[]: ms %j edw), [] [570] [571] Underfull \vbox (badness 10000) has occurred while \output is active [] [572] Underfull \hbox (badness 10000) in paragraph at lines 5077--5078 | \T1/pcr/m/n/8 type([]), dimension(sziw[]_[](ms),szjbw[]_[](ms)), intent(in) \T1/pcr/m/sl/8 B[]T[]C[]L[]_[]v \T1/pcr/m/n/8 ) [] [573] [574] Underfull \vbox (badness 10000) has occurred while \output is active [] [575] Underfull \vbox (badness 10000) has occurred while \output is active [] [576] [577] Underfull \hbox (badness 10000) detected at line 5375 [][][] [] [578] Underfull \hbox (badness 10000) detected at line 5507 [][][] [] [579] Underfull \vbox (badness 10000) has occurred while \output is active [] [580]) (./namespacemom__bkgnd__mixing.tex [581] Overfull \vbox (4.83084pt too high) has occurred while \output is active [] [582] [583] Underfull \vbox (badness 10000) has occurred while \output is active [] [584] [585] [586] Underfull \vbox (badness 10000) has occurred while \output is active [] [587] [588]) (./namespacemom__boundary__update.tex [589] [590] [591] [592]) (./namespacemom__bulk__mixed__layer.tex [593] [594] [595] [596] Underfull \vbox (badness 10000) has occurred while \output is active [] [597] Underfull \vbox (badness 10000) has occurred while \output is active [] [598] Underfull \vbox (badness 10000) has occurred while \output is active [] [599] Underfull \vbox (badness 10000) has occurred while \output is active [] [600] Underfull \vbox (badness 10000) has occurred while \output is active [] [601] Underfull \vbox (badness 10000) has occurred while \output is active [] [602] Underfull \vbox (badness 10000) has occurred while \output is active [] [603] [604] Underfull \vbox (badness 10000) has occurred while \output is active [] [605] Underfull \vbox (badness 10000) has occurred while \output is active [] [606] Underfull \vbox (badness 10000) has occurred while \output is active [] [607] [608] [609] Underfull \vbox (badness 10000) has occurred while \output is active [] [610] Underfull \hbox (badness 10000) detected at line 1278 [][][] [] [611] [612] [613] Underfull \vbox (badness 10000) has occurred while \output is active [] [614] [615] [616] [617] Underfull \vbox (badness 10000) has occurred while \output is active [] [618] Underfull \vbox (badness 10000) has occurred while \output is active [] [619] Underfull \vbox (badness 10000) has occurred while \output is active [] [620] [621] [622] [623] Underfull \vbox (badness 10000) has occurred while \output is active [] [624] Underfull \vbox (badness 10000) has occurred while \output is active [] [625] Underfull \vbox (badness 10000) has occurred while \output is active [] [626] Underfull \vbox (badness 10000) has occurred while \output is active [] [627] [628] [629] Underfull \vbox (badness 10000) has occurred while \output is active [] [630] Underfull \vbox (badness 10000) has occurred while \output is active [] [631] Underfull \vbox (badness 10000) has occurred while \output is active [] [632] [633] [634] Underfull \vbox (badness 10000) has occurred while \output is active [] [635] Underfull \vbox (badness 10000) has occurred while \output is active [] [636] Underfull \vbox (badness 10000) has occurred while \output is active [] [637] Underfull \vbox (badness 10000) has occurred while \output is active [] [638] Underfull \vbox (badness 10000) has occurred while \output is active [] [639] Underfull \vbox (badness 10000) has occurred while \output is active [] [640] Underfull \vbox (badness 10000) has occurred while \output is active [] [641] Underfull \vbox (badness 10000) has occurred while \output is active [] [642] Underfull \vbox (badness 10000) has occurred while \output is active [] [643] Underfull \vbox (badness 10000) has occurred while \output is active [] [644] [645] [646] Underfull \vbox (badness 10000) has occurred while \output is active [] [647] Underfull \vbox (badness 10000) has occurred while \output is active [] [648] Underfull \vbox (badness 10000) has occurred while \output is active [] [649] [650]) (./namespacemom__checksum__packages.tex [651] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 u[] [] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 v[] [] [652] [653] [654] [655] Underfull \vbox (badness 10000) has occurred while \output is active [] [656] [657] [658] [659]) (./namespacemom__checksums.tex [660] [661] [662] [663] [664] Underfull \vbox (badness 10000) has occurred while \output is active [] [665] [666] Overfull \vbox (6.56526pt too high) has occurred while \output is active [] [667] [668] [669] [670] Overfull \vbox (36.94623pt too high) has occurred while \output is active [] [671] [672] Underfull \vbox (badness 10000) has occurred while \output is active [] [673] [674] Underfull \vbox (badness 10000) has occurred while \output is active [] [675] [676] [677] Underfull \vbox (badness 10000) has occurred while \output is active [] [678] [679] [680] Underfull \vbox (badness 10000) has occurred while \output is active [] [681] [682] [683] [684] [685] [686] [687] [688] Underfull \vbox (badness 10000) has occurred while \output is active [] [689] [690] Underfull \vbox (badness 10000) has occurred while \output is active [] [691] Underfull \vbox (badness 10000) has occurred while \output is active [] [692] [693] [694] [695] [696] Underfull \vbox (badness 10000) has occurred while \output is active [] [697] [698] [699] Underfull \vbox (badness 10000) has occurred while \output is active [] [700] [701] [702] [703] [704]) (./namespacemom__coms.tex [705] [706] [707] [708] [709] Underfull \hbox (badness 10000) detected at line 265 [][][] [] [710] Underfull \hbox (badness 10000) detected at line 301 [][][] [] Underfull \hbox (badness 10000) detected at line 342 [][][] [] [711] [712] [713] [714] Overfull \vbox (6.82013pt too high) has occurred while \output is active [] [715] [716] [717] Underfull \hbox (badness 10000) detected at line 788 [][][] [] [718] Underfull \vbox (badness 10000) has occurred while \output is active [] [719] [720] Underfull \hbox (badness 10000) detected at line 950 [][][] [] [721] [722] Underfull \hbox (badness 10000) detected at line 1090 [][][] [] [723] Underfull \vbox (badness 10000) has occurred while \output is active [] [724]) (./namespacemom__constants.tex) (./namespacemom__continuity.tex [725] Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional [] Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional [] Underfull \hbox (badness 10000) in paragraph at lines 38--39 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [] [726] Overfull \vbox (5.65964pt too high) has occurred while \output is active [] [727] [728] [729] Underfull \hbox (badness 10000) detected at line 277 [][][] [] ) (./namespacemom__continuity__ppm.tex [730] [731] Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional [] Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional [] Underfull \hbox (badness 10000) in paragraph at lines 74--75 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [] [732] [733] Underfull \vbox (badness 10000) has occurred while \output is active [] [734] [735] [736] [737] Underfull \hbox (badness 10000) detected at line 426 [][][] [] [738] [739] [740] [741] [742] [743] [744] Underfull \vbox (badness 10000) has occurred while \output is active [] [745] Underfull \hbox (badness 10000) in paragraph at lines 950--951 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional [] [746] [747] Underfull \vbox (badness 10000) has occurred while \output is active [] [748] Underfull \vbox (badness 10000) has occurred while \output is active [] [749] Underfull \vbox (badness 10000) has occurred while \output is active [] [750] [751] [752] [753] [754] Underfull \vbox (badness 10000) has occurred while \output is active [] [755] Underfull \vbox (badness 10000) has occurred while \output is active [] [756] [757] [758] Underfull \hbox (badness 10000) detected at line 1804 [][][] [] [759] [760] Underfull \vbox (badness 10000) has occurred while \output is active [] [761] [762] [763] Underfull \vbox (badness 10000) has occurred while \output is active [] [764] Underfull \hbox (badness 10000) in paragraph at lines 2258--2259 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional [] [765] [766] Underfull \hbox (badness 10000) in paragraph at lines 2406--2407 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), optional [] [767] [768] [769] Underfull \vbox (badness 10000) has occurred while \output is active [] [770] [771] [772] Underfull \hbox (badness 10000) in paragraph at lines 2756--2757 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional [] [773] [774] Underfull \vbox (badness 10000) has occurred while \output is active [] [775] Underfull \vbox (badness 10000) has occurred while \output is active [] [776] Underfull \vbox (badness 10000) has occurred while \output is active [] [777]) (./namespacemom__controlled__forcing.tex [778] Overfull \vbox (29.87068pt too high) has occurred while \output is active [] [779] [780] Underfull \vbox (badness 10000) has occurred while \output is active [] [781] Underfull \vbox (badness 10000) has occurred while \output is active [] [782] [783] [784] [785] Underfull \hbox (badness 10000) detected at line 537 [][][] [] Underfull \hbox (badness 10000) detected at line 574 [][][] [] [786] [787]) (./namespacemom__coord__initialization.tex [788] [789] [790] [791] [792] [793] [794] [795] Overfull \vbox (43.5485pt too high) has occurred while \output is active [] [796] [797] [798] Underfull \vbox (badness 10000) has occurred while \output is active [] [799]) (./namespacemom__coriolisadv.tex [800] [801] [802] [803] Underfull \vbox (badness 10000) has occurred while \output is active [] [804] Underfull \vbox (badness 10000) has occurred while \output is active [] [805] Underfull \vbox (badness 10000) has occurred while \output is active [] [806] Underfull \vbox (badness 10000) has occurred while \output is active [] [807] Underfull \vbox (badness 10000) has occurred while \output is active [] [808] Underfull \vbox (badness 10000) has occurred while \output is active [] [809] Underfull \vbox (badness 10000) has occurred while \output is active [] [810] Underfull \vbox (badness 10000) has occurred while \output is active [] [811] Underfull \vbox (badness 10000) has occurred while \output is active [] [812] [813] [814] Underfull \vbox (badness 10000) has occurred while \output is active [] [815] Underfull \vbox (badness 10000) has occurred while \output is active [] [816] Overfull \vbox (28.26488pt too high) has occurred while \output is active [] [817] [818]) (./namespacemom__cpu__clock.tex Underfull \hbox (badness 10000) detected at line 33 [][][] [] [819]) (./namespacemom__cvmix__conv.tex Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(inout), optional [] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(inout), optional [] Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(inout), optional [] [820] [821] Underfull \vbox (badness 10000) has occurred while \output is active [] [822] [823] [824] [825]) (./namespacemom__cvmix__ddiff.tex Underfull \hbox (badness 10000) in paragraph at lines 35--36 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout), optional [] [826] [827] Underfull \vbox (badness 10000) has occurred while \output is active [] [828] [829] [830] [831]) (./namespacemom__cvmix__kpp.tex [832] [833] [834] Underfull \vbox (badness 10000) has occurred while \output is active [] [835] Underfull \vbox (badness 10000) has occurred while \output is active [] [836] Underfull \vbox (badness 10000) has occurred while \output is active [] [837] [838] [839] Underfull \vbox (badness 10000) has occurred while \output is active [] [840] Underfull \vbox (badness 10000) has occurred while \output is active [] [841] Underfull \vbox (badness 10000) has occurred while \output is active [] [842] Underfull \vbox (badness 10000) has occurred while \output is active [] [843] [844] [845] [846] Underfull \vbox (badness 10000) has occurred while \output is active [] [847] Underfull \vbox (badness 10000) has occurred while \output is active [] [848] Underfull \vbox (badness 10000) has occurred while \output is active [] [849] Underfull \vbox (badness 10000) has occurred while \output is active [] [850] Underfull \hbox (badness 10000) in paragraph at lines 1420--1421 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] [] Overfull \vbox (40.83766pt too high) has occurred while \output is active [] [851] Underfull \hbox (badness 10000) in paragraph at lines 1515--1516 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in) \T1/pcr/m/sl/8 non[]Local[] [] [852] [853] [854]) (./namespacemom__cvmix__shear.tex [855] Overfull \vbox (65.14655pt too high) has occurred while \output is active [] [856] [857] [858] Underfull \hbox (badness 10000) detected at line 254 [][][] [] Underfull \vbox (badness 10000) has occurred while \output is active [] [859] [860]) (./namespacemom__debugging.tex [861] [862] [863] Overfull \vbox (14.49733pt too high) has occurred while \output is active [] [864] [865] [866] [867] [868] [869] [870] Overfull \vbox (0.46025pt too high) has occurred while \output is active [] [871] Underfull \vbox (badness 10000) has occurred while \output is active [] [872] [873] [874] [875] Underfull \vbox (badness 10000) has occurred while \output is active [] [876] [877] [878] [879] [880] [881] [882] Underfull \hbox (badness 10000) detected at line 1393 [][][] [] [883]) (./namespacemom__density__integrals.tex [884] [885] [886] [887] [888] [889] Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional [] Underfull \hbox (badness 10000) in paragraph at lines 346--347 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [] [890] [891] Underfull \vbox (badness 10000) has occurred while \output is active [] [892] Underfull \vbox (badness 10000) has occurred while \output is active [] [893] [894] [895] Underfull \vbox (badness 10000) has occurred while \output is active [] [896] Underfull \vbox (badness 10000) has occurred while \output is active [] [897] Underfull \vbox (badness 10000) has occurred while \output is active [] [898] Underfull \vbox (badness 10000) has occurred while \output is active [] [899] Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional [] Underfull \hbox (badness 10000) in paragraph at lines 1030--1031 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [] [900] [901] Underfull \vbox (badness 10000) has occurred while \output is active [] [902] Underfull \vbox (badness 10000) has occurred while \output is active [] [903] Underfull \vbox (badness 10000) has occurred while \output is active [] [904] Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional [] Underfull \hbox (badness 10000) in paragraph at lines 1423--1424 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [] [905] [906] Underfull \vbox (badness 10000) has occurred while \output is active [] [907] Underfull \vbox (badness 10000) has occurred while \output is active [] [908] Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isdb[]: hi %iedb, hi %jsd[]: hi %jed), in tent(inout), optional [] Underfull \hbox (badness 10000) in paragraph at lines 1682--1683 | \T1/pcr/m/n/8 real, dimension( hi %isd[]: hi %ied, hi %jsdb[]: hi %jedb), in tent(inout), optional [] [909] [910] Underfull \vbox (badness 10000) has occurred while \output is active [] [911] Underfull \vbox (badness 10000) has occurred while \output is active [] [912] [913] [914]) (./namespacemom__diabatic__aux.tex [915] [916] [917] [918] [919] Underfull \vbox (badness 10000) has occurred while \output is active [] [920] Underfull \vbox (badness 10000) has occurred while \output is active [] [921] Underfull \vbox (badness 10000) has occurred while \output is active [] [922] Underfull \vbox (badness 10000) has occurred while \output is active [] [923] Underfull \vbox (badness 10000) has occurred while \output is active [] [924] Underfull \vbox (badness 10000) has occurred while \output is active [] [925] [926] [927] Underfull \vbox (badness 10000) has occurred while \output is active [] [928] Overfull \vbox (26.02458pt too high) has occurred while \output is active [] [929] [930] [931] [932] Underfull \vbox (badness 10000) has occurred while \output is active [] [933] [934] [935] [936] [937] [938] [939] [940] [941] [942]) (./namespacemom__diabatic__driver.tex [943] [944] [945] Overfull \vbox (14.49553pt too high) has occurred while \output is active [] [946] [947] [948] Underfull \vbox (badness 10000) has occurred while \output is active [] [949] [950] [951] Underfull \vbox (badness 10000) has occurred while \output is active [] [952] Underfull \vbox (badness 10000) has occurred while \output is active [] [953] Underfull \vbox (badness 10000) has occurred while \output is active [] [954] Underfull \vbox (badness 10000) has occurred while \output is active [] [955] Underfull \vbox (badness 10000) has occurred while \output is active [] [956] Underfull \vbox (badness 10000) has occurred while \output is active [] [957] Underfull \vbox (badness 10000) has occurred while \output is active [] [958] Underfull \vbox (badness 10000) has occurred while \output is active [] [959] [960] [961] Underfull \vbox (badness 10000) has occurred while \output is active [] [962] Underfull \vbox (badness 10000) has occurred while \output is active [] [963] Underfull \vbox (badness 10000) has occurred while \output is active [] [964] Underfull \vbox (badness 10000) has occurred while \output is active [] [965] Underfull \vbox (badness 10000) has occurred while \output is active [] [966] Underfull \vbox (badness 10000) has occurred while \output is active [] [967] Underfull \vbox (badness 10000) has occurred while \output is active [] [968] Underfull \vbox (badness 10000) has occurred while \output is active [] [969] [970] [971] [972] Underfull \vbox (badness 10000) has occurred while \output is active [] [973] Underfull \vbox (badness 10000) has occurred while \output is active [] [974] Underfull \vbox (badness 10000) has occurred while \output is active [] [975] Underfull \vbox (badness 10000) has occurred while \output is active [] [976] Underfull \vbox (badness 10000) has occurred while \output is active [] [977] Underfull \vbox (badness 10000) has occurred while \output is active [] [978] [979] [980] [981] [982] [983] [984] [985] [986] Underfull \vbox (badness 10000) has occurred while \output is active [] [987] Underfull \vbox (badness 10000) has occurred while \output is active [] [988] Underfull \vbox (badness 10000) has occurred while \output is active [] [989] Underfull \vbox (badness 10000) has occurred while \output is active [] [990] Underfull \vbox (badness 10000) has occurred while \output is active [] [991] Underfull \vbox (badness 10000) has occurred while \output is active [] [992] Underfull \vbox (badness 10000) has occurred while \output is active [] [993] Underfull \vbox (badness 10000) has occurred while \output is active [] [994] Underfull \vbox (badness 10000) has occurred while \output is active [] [995] Underfull \vbox (badness 10000) has occurred while \output is active [] [996] Underfull \vbox (badness 10000) has occurred while \output is active [] [997]) (./namespacemom__diag__manager__wrapper.tex [998] Underfull \hbox (badness 2626) in paragraph at lines 18--19 []\T1/phv/m/n/10 integer func-tion [] (module[]_[]name, field[]_[]name, init[]_ []time, long[]_[]name, units, [] [999] [1000] [1001]) (./namespacemom__diag__mediator.tex Underfull \hbox (badness 779) in paragraph at lines 39--39 []\T1/phv/m/sl/9 set[]_[]masks[]_[]for[]_[]axes sets up the 2d and 3d masks for di-ag-nos-tics us-ing the cur-rent grid recorded af-ter call-ing [] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] [1010] Underfull \vbox (badness 10000) has occurred while \output is active [] [1011] [1012] [1013] [1014] [1015] Underfull \vbox (badness 10000) has occurred while \output is active [] [1016] [1017] [1018] [1019] [1020] Overfull \vbox (19.73378pt too high) has occurred while \output is active [] [1021] [1022] [1023] Underfull \vbox (badness 10000) has occurred while \output is active [] [1024] [1025] Underfull \vbox (badness 10000) has occurred while \output is active [] [1026] Underfull \vbox (badness 10000) has occurred while \output is active [] [1027] [1028] [1029] Underfull \hbox (badness 10000) detected at line 1799 [][][] [] [1030] [1031] Underfull \vbox (badness 10000) has occurred while \output is active [] [1032] [1033] [1034] [1035] [1036] [1037] [1038] Underfull \vbox (badness 10000) has occurred while \output is active [] [1039] [1040] Overfull \hbox (36.1684pt too wide) in paragraph at lines 2562--2562 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [] [1041] Underfull \vbox (badness 10000) has occurred while \output is active [] [1042] [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 10000) detected at line 3012 [][][] [] [1048] Overfull \vbox (7.75447pt too high) has occurred while \output is active [] [1049] [1050] Underfull \hbox (badness 10000) detected at line 3181 [][][] [] [1051] [1052] [1053] [1054] [1055] [1056] Underfull \vbox (badness 10000) has occurred while \output is active [] [1057] [1058] Underfull \vbox (badness 10000) has occurred while \output is active [] [1059] [1060] Underfull \vbox (badness 10000) has occurred while \output is active [] [1061] Overfull \vbox (24.95552pt too high) has occurred while \output is active [] [1062] Overfull \vbox (24.2831pt too high) has occurred while \output is active [] [1063] [1064] [1065] [1066] Underfull \vbox (badness 10000) has occurred while \output is active [] [1067] Underfull \vbox (badness 10000) has occurred while \output is active [] [1068] Overfull \vbox (10.18648pt too high) has occurred while \output is active [] [1069] [1070] [1071] [1072] Underfull \vbox (badness 10000) has occurred while \output is active [] [1073] [1074] Underfull \hbox (badness 10000) detected at line 4862 [][][] [] [1075] Underfull \vbox (badness 10000) has occurred while \output is active [] [1076] Underfull \hbox (badness 10000) detected at line 5014 [][][] [] [1077] [1078] Underfull \vbox (badness 10000) has occurred while \output is active [] [1079] [1080] Underfull \vbox (badness 10000) has occurred while \output is active [] [1081] Underfull \vbox (badness 10000) has occurred while \output is active [] [1082] [1083] [1084] Underfull \vbox (badness 10000) has occurred while \output is active [] [1085] [1086] [1087] [1088]) (./namespacemom__diag__remap.tex [1089] Underfull \hbox (badness 1320) in paragraph at lines 36--36 []\T1/phv/m/sl/9 Whether or not the axes for this ver-ti-cal co-or-di-nated has been con-fig-ured. Con-fig-u-ra-tion is com-plete when [] [1090] Underfull \hbox (badness 820) in paragraph at lines 60--61 []\T1/phv/m/n/10 Whether or not the axes for this ver-ti-cal co-or-di-nated has been con-fig-ured. Con-fig-u-ra-tion is com-plete when [] Overfull \vbox (15.70502pt too high) has occurred while \output is active [] [1091] Underfull \vbox (badness 10000) has occurred while \output is active [] [1092] [1093] [1094] Underfull \vbox (badness 10000) has occurred while \output is active [] [1095] Overfull \vbox (2.68217pt too high) has occurred while \output is active [] [1096] [1097] Underfull \hbox (badness 10000) detected at line 533 [][][] [] Overfull \vbox (57.59293pt too high) has occurred while \output is active [] [1098] [1099] [1100] Underfull \vbox (badness 10000) has occurred while \output is active [] [1101] Overfull \vbox (13.8649pt too high) has occurred while \output is active [] [1102] [1103] [1104]) (./namespacemom__diag__vkernels.tex [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112]) (./namespacemom__diagnostics.tex [1113] [1114] [1115] [1116] Underfull \vbox (badness 10000) has occurred while \output is active [] [1117] Underfull \vbox (badness 10000) has occurred while \output is active [] [1118] Underfull \vbox (badness 10000) has occurred while \output is active [] [1119] Underfull \vbox (badness 10000) has occurred while \output is active [] [1120] Underfull \vbox (badness 10000) has occurred while \output is active [] [1121] Underfull \vbox (badness 10000) has occurred while \output is active [] [1122] Underfull \vbox (badness 10000) has occurred while \output is active [] [1123] [1124] Underfull \vbox (badness 10000) has occurred while \output is active [] [1125] [1126] [1127] [1128] [1129] [1130] [1131] Underfull \vbox (badness 10000) has occurred while \output is active [] [1132] Underfull \vbox (badness 10000) has occurred while \output is active [] [1133] Underfull \vbox (badness 10000) has occurred while \output is active [] [1134] Underfull \vbox (badness 10000) has occurred while \output is active [] [1135] [1136] Overfull \vbox (29.00815pt too high) has occurred while \output is active [] [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] Underfull \vbox (badness 10000) has occurred while \output is active [] [1147] Underfull \vbox (badness 10000) has occurred while \output is active [] [1148]) (./namespacemom__diapyc__energy__req.tex [1149] [1150] Underfull \vbox (badness 10000) has occurred while \output is active [] [1151] Underfull \vbox (badness 10000) has occurred while \output is active [] [1152] Underfull \vbox (badness 10000) has occurred while \output is active [] [1153] Underfull \vbox (badness 10000) has occurred while \output is active [] [1154] Underfull \vbox (badness 10000) has occurred while \output is active [] [1155] Underfull \vbox (badness 10000) has occurred while \output is active [] [1156] Underfull \vbox (badness 10000) has occurred while \output is active [] [1157] Underfull \vbox (badness 10000) has occurred while \output is active [] [1158] Underfull \vbox (badness 10000) has occurred while \output is active [] [1159] Underfull \vbox (badness 10000) has occurred while \output is active [] [1160] [1161] [1162] [1163] [1164] [1165] [1166] Underfull \vbox (badness 10000) has occurred while \output is active [] [1167] [1168] Underfull \vbox (badness 10000) has occurred while \output is active [] [1169] [1170]) (./namespacemom__document.tex [1171] [1172] [1173] Underfull \vbox (badness 10000) has occurred while \output is active [] [1174] [1175] [1176] [1177] [1178] Overfull \vbox (57.30919pt too high) has occurred while \output is active [] [1179] [1180] [1181] [1182] [1183] [1184] [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] Underfull \hbox (badness 10000) detected at line 1389 [][][] [] [1193] [1194] [1195] [1196] [1197] Underfull \vbox (badness 10000) has occurred while \output is active [] [1198]) (./namespacemom__domains.tex [1199] [1200] [1201] [1202] [1203] Underfull \vbox (badness 10000) has occurred while \output is active [] [1204] [1205] [1206] Overfull \vbox (1.22655pt too high) has occurred while \output is active [] [1207] [1208] [1209] [1210] [1211] [1212] [1213] [1214] [1215] [1216] [1217] [1218] [1219] [1220] Underfull \vbox (badness 10000) has occurred while \output is active [] [1221] Underfull \vbox (badness 10000) has occurred while \output is active [] [1222] Underfull \vbox (badness 10000) has occurred while \output is active [] [1223] Underfull \vbox (badness 10000) has occurred while \output is active [] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] Underfull \hbox (badness 10000) detected at line 2078 [][][] [] [1232] Underfull \hbox (badness 10000) detected at line 2155 [][][] [] [1233] [1234] [1235] [1236] [1237] [1238] [1239] Underfull \hbox (badness 10000) detected at line 2578 [][][] [] [1240] [1241] Underfull \hbox (badness 10000) detected at line 2668 [][][] [] [1242]) (./namespacemom__dyn__horgrid.tex [1243] Underfull \hbox (badness 10000) detected at line 42 [][][] [] [1244] [1245] [1246] [1247] [1248]) (./namespacemom__dynamics__split__rk2.tex [1249] Underfull \vbox (badness 10000) has occurred while \output is active [] [1250] Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(inout), target [] Underfull \hbox (badness 10000) in paragraph at lines 114--115 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(inout), target [] [1251] [1252] [1253] Underfull \vbox (badness 10000) has occurred while \output is active [] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [] [1255] Underfull \vbox (badness 10000) has occurred while \output is active [] [1256] Underfull \vbox (badness 10000) has occurred while \output is active [] [1257] Underfull \vbox (badness 10000) has occurred while \output is active [] [1258] [1259] [1260] [1261] Underfull \vbox (badness 10000) has occurred while \output is active [] [1262] Underfull \vbox (badness 10000) has occurred while \output is active [] [1263] Underfull \vbox (badness 10000) has occurred while \output is active [] [1264] Underfull \vbox (badness 10000) has occurred while \output is active [] [1265] Underfull \vbox (badness 10000) has occurred while \output is active [] [1266] Underfull \vbox (badness 10000) has occurred while \output is active [] [1267] Underfull \vbox (badness 10000) has occurred while \output is active [] [1268] Underfull \vbox (badness 10000) has occurred while \output is active [] [1269]) (./namespacemom__dynamics__unsplit.tex [1270] [1271] [1272] [1273] Underfull \vbox (badness 10000) has occurred while \output is active [] [1274] [1275] [1276] [1277] [1278] Underfull \vbox (badness 10000) has occurred while \output is active [] [1279] Underfull \vbox (badness 10000) has occurred while \output is active [] [1280] Underfull \vbox (badness 10000) has occurred while \output is active [] [1281]) (./namespacemom__dynamics__unsplit__rk2.tex [1282] [1283] [1284] [1285] Underfull \vbox (badness 10000) has occurred while \output is active [] [1286] Overfull \vbox (34.51509pt too high) has occurred while \output is active [] [1287] [1288] [1289] Underfull \vbox (badness 10000) has occurred while \output is active [] [1290] Underfull \vbox (badness 10000) has occurred while \output is active [] [1291] Underfull \vbox (badness 10000) has occurred while \output is active [] [1292]) (./namespaceMOM__energetic__PBL.tex) (./namespacemom__energetic__pbl.tex [1293] [1294] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] [] Underfull \hbox (badness 10000) in paragraph at lines 88--89 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(out), optional \T1/pcr/m/sl/8 d[] [] [1295] [1296] Underfull \vbox (badness 10000) has occurred while \output is active [] [1297] Underfull \vbox (badness 10000) has occurred while \output is active [] [1298] Underfull \vbox (badness 10000) has occurred while \output is active [] [1299] [1300] [1301] [1302] Underfull \vbox (badness 10000) has occurred while \output is active [] [1303] Underfull \vbox (badness 10000) has occurred while \output is active [] [1304] Underfull \vbox (badness 10000) has occurred while \output is active [] [1305] Underfull \vbox (badness 10000) has occurred while \output is active [] [1306] Underfull \vbox (badness 10000) has occurred while \output is active [] [1307] [1308] [1309] Underfull \vbox (badness 10000) has occurred while \output is active [] [1310] Underfull \vbox (badness 10000) has occurred while \output is active [] [1311] Underfull \vbox (badness 10000) has occurred while \output is active [] [1312] Underfull \vbox (badness 10000) has occurred while \output is active [] [1313] Underfull \vbox (badness 10000) has occurred while \output is active [] [1314] Underfull \vbox (badness 10000) has occurred while \output is active [] [1315] Underfull \vbox (badness 10000) has occurred while \output is active [] [1316] Underfull \vbox (badness 10000) has occurred while \output is active [] [1317] Underfull \vbox (badness 10000) has occurred while \output is active [] [1318] Underfull \vbox (badness 10000) has occurred while \output is active [] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [] [1320] [1321] Underfull \vbox (badness 10000) has occurred while \output is active [] [1322] [1323] [1324] Underfull \vbox (badness 10000) has occurred while \output is active [] [1325] [1326] [1327] [1328] Underfull \vbox (badness 10000) has occurred while \output is active [] [1329] [1330] [1331] [1332] [1333]) (./namespacemom__entrain__diffusive.tex [1334] [1335] Underfull \vbox (badness 10000) has occurred while \output is active [] [1336] [1337] Underfull \vbox (badness 10000) has occurred while \output is active [] [1338] [1339] [1340] [1341] Underfull \vbox (badness 10000) has occurred while \output is active [] [1342] [1343] [1344] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 integer, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), inten t(inout), optional \T1/pcr/m/sl/8 kb[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 Kd[]_[][] [] Underfull \hbox (badness 10000) in paragraph at lines 723--724 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(in), optional [] [1345] [1346] Underfull \vbox (badness 10000) has occurred while \output is active [] [1347] Underfull \vbox (badness 10000) has occurred while \output is active [] [1348] Underfull \vbox (badness 10000) has occurred while \output is active [] [1349] Underfull \vbox (badness 10000) has occurred while \output is active [] [1350] Underfull \vbox (badness 10000) has occurred while \output is active [] [1351] Underfull \vbox (badness 10000) has occurred while \output is active [] [1352] Underfull \vbox (badness 10000) has occurred while \output is active [] [1353] Underfull \vbox (badness 10000) has occurred while \output is active [] [1354] Underfull \vbox (badness 10000) has occurred while \output is active [] [1355] Underfull \vbox (badness 10000) has occurred while \output is active [] [1356] [1357] Underfull \vbox (badness 10000) has occurred while \output is active [] [1358] [1359] [1360] [1361] [1362] Underfull \vbox (badness 10000) has occurred while \output is active [] [1363] Underfull \vbox (badness 10000) has occurred while \output is active [] [1364] Underfull \vbox (badness 10000) has occurred while \output is active [] [1365] [1366] [1367] Underfull \vbox (badness 10000) has occurred while \output is active [] [1368]) (./namespacemom__eos.tex [1369] [1370] [1371] [1372] Underfull \vbox (badness 10000) has occurred while \output is active [] [1373] [1374] [1375] [1376] [1377] [1378] [1379] Overfull \vbox (21.86925pt too high) has occurred while \output is active [] [1380] [1381] Overfull \vbox (45.78584pt too high) has occurred while \output is active [] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] [1395] [1396] [1397] [1398] [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 10000) detected at line 2146 [][][] [] [1404] [1405] [1406] [1407] [1408] Underfull \hbox (badness 10000) detected at line 2431 [][][] [] Overfull \vbox (47.24054pt too high) has occurred while \output is active [] [1409] Underfull \vbox (badness 10000) has occurred while \output is active [] [1410]) (./namespacemom__eos__linear.tex [1411] [1412] Overfull \vbox (1.44406pt too high) has occurred while \output is active [] [1413] Underfull \vbox (badness 10000) has occurred while \output is active [] [1414] Underfull \vbox (badness 10000) has occurred while \output is active [] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] [1424] Underfull \vbox (badness 10000) has occurred while \output is active [] [1425] [1426] [1427] Underfull \vbox (badness 10000) has occurred while \output is active [] [1428]) (./namespacemom__eos__nemo.tex [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./namespacemom__eos__teos10.tex [1441] [1442] [1443] [1444] [1445] [1446] Overfull \vbox (69.66199pt too high) has occurred while \output is active [] [1447] Underfull \vbox (badness 10000) has occurred while \output is active [] [1448] [1449] [1450]) (./namespacemom__eos__unesco.tex [1451] [1452] [1453] [1454] [1455] [1456] [1457] Overfull \vbox (42.16423pt too high) has occurred while \output is active [] [1458] [1459] Overfull \vbox (6.26321pt too high) has occurred while \output is active [] [1460]) (./namespacemom__eos__wright.tex [1461] [1462] Overfull \vbox (34.43738pt too high) has occurred while \output is active [] [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] Underfull \vbox (badness 10000) has occurred while \output is active [] [1475] [1476] [1477] Underfull \vbox (badness 10000) has occurred while \output is active [] [1478] Underfull \vbox (badness 10000) has occurred while \output is active [] [1479]) (./namespacemom__error__handler.tex [1480] [1481] [1482] [1483] [1484] [1485]) (./namespacemom__file__parser.tex [1486] [1487] Underfull \hbox (badness 2065) in paragraph at lines 82--83 []\T1/phv/m/n/10 subroutine [] (CS, mod-u-le-name, var-name, value, desc, units , de-fault, layout[]Param, [] [1488] [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 10000) detected at line 398 [][][] [] [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] Underfull \vbox (badness 10000) has occurred while \output is active [] [1508] Underfull \vbox (badness 10000) has occurred while \output is active [] [1509] Underfull \vbox (badness 10000) has occurred while \output is active [] [1510] [1511] Overfull \vbox (31.06355pt too high) has occurred while \output is active [] [1512] [1513] [1514] [1515] [1516] [1517] [1518] [1519] Underfull \vbox (badness 10000) has occurred while \output is active [] [1520] [1521] Underfull \vbox (badness 10000) has occurred while \output is active [] [1522] [1523] [1524] [1525] [1526] [1527] [1528] [1529] [1530] [1531] Overfull \vbox (16.03447pt too high) has occurred while \output is active [] [1532] [1533] [1534] [1535] Underfull \vbox (badness 10000) has occurred while \output is active [] [1536] [1537] [1538]) (./namespacemom__fixed__initialization.tex [1539] [1540] [1541] [1542]) (./namespacemom__forcing__type.tex [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke+1), intent(inout) \T1/pcr/m/sl/8 buoyancy[] [] Underfull \hbox (badness 10000) in paragraph at lines 563--564 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 net[]Heat[] [] [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [] [1556] [1557] [1558] [1559] Underfull \vbox (badness 10000) has occurred while \output is active [] [1560] Underfull \vbox (badness 10000) has occurred while \output is active [] [1561] Underfull \vbox (badness 10000) has occurred while \output is active [] [1562] Underfull \vbox (badness 10000) has occurred while \output is active [] [1563] Underfull \vbox (badness 10000) has occurred while \output is active [] [1564] [1565] [1566] [1567] [1568] Underfull \vbox (badness 10000) has occurred while \output is active [] [1569] [1570] [1571] Underfull \vbox (badness 10000) has occurred while \output is active [] [1572] Underfull \vbox (badness 10000) has occurred while \output is active [] [1573] Underfull \vbox (badness 10000) has occurred while \output is active [] [1574] Underfull \vbox (badness 10000) has occurred while \output is active [] [1575] Underfull \vbox (badness 10000) has occurred while \output is active [] [1576] Underfull \vbox (badness 10000) has occurred while \output is active [] [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] Underfull \vbox (badness 10000) has occurred while \output is active [] [1589] Underfull \vbox (badness 10000) has occurred while \output is active [] [1590] Underfull \vbox (badness 10000) has occurred while \output is active [] [1591] Underfull \vbox (badness 10000) has occurred while \output is active [] [1592] Underfull \vbox (badness 10000) has occurred while \output is active [] [1593] Underfull \vbox (badness 10000) has occurred while \output is active [] [1594] Underfull \vbox (badness 10000) has occurred while \output is active [] [1595] [1596] [1597] [1598] [1599] [1600]) (./namespacemom__full__convection.tex [1601] [1602] Underfull \vbox (badness 10000) has occurred while \output is active [] [1603] Underfull \vbox (badness 10000) has occurred while \output is active [] [1604] [1605] Underfull \hbox (badness 10000) detected at line 362 [][][] [] [1606] Overfull \vbox (25.10631pt too high) has occurred while \output is active [] [1607] [1608]) (./namespacemom__generic__tracer.tex [1609] [1610] [1611] Underfull \vbox (badness 10000) has occurred while \output is active [] [1612] [1613] [1614] [1615] Underfull \vbox (badness 10000) has occurred while \output is active [] [1616] [1617] [1618] Underfull \hbox (badness 10000) detected at line 648 [][][] [] [1619] Overfull \vbox (42.70247pt too high) has occurred while \output is active [] [1620] Underfull \hbox (badness 10000) detected at line 763 [][][] [] [1621] [1622] [1623] Underfull \vbox (badness 10000) has occurred while \output is active [] [1624]) (./namespacemom__geothermal.tex [1625] Underfull \vbox (badness 10000) has occurred while \output is active [] [1626] [1627] Underfull \vbox (badness 10000) has occurred while \output is active [] [1628] Underfull \vbox (badness 10000) has occurred while \output is active [] [1629] [1630] [1631] Underfull \vbox (badness 10000) has occurred while \output is active [] [1632] [1633] Underfull \vbox (badness 10000) has occurred while \output is active [] [1634]) (./namespacemom__get__input.tex [1635] [1636]) (./namespacemom__grid.tex [1637] [1638] Underfull \hbox (badness 10000) detected at line 70 [][][] [] [1639] [1640] [1641] [1642] [1643] Underfull \vbox (badness 10000) has occurred while \output is active [] [1644] [1645] [1646]) (./namespacemom__grid__initialize.tex [1647] [1648] Underfull \hbox (badness 10000) detected at line 72 [][][] [] [1649] Overfull \vbox (10.33813pt too high) has occurred while \output is active [] [1650] [1651] [1652] [1653] Underfull \hbox (badness 10000) detected at line 347 [][][] [] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] Underfull \vbox (badness 10000) has occurred while \output is active [] [1665] Underfull \vbox (badness 10000) has occurred while \output is active [] [1666] [1667] Underfull \vbox (badness 10000) has occurred while \output is active [] [1668] Underfull \vbox (badness 10000) has occurred while \output is active [] [1669] [1670] Underfull \vbox (badness 10000) has occurred while \output is active [] [1671]) (./namespacemom__hor__index.tex [1672] [1673] [1674]) (./namespacemom__hor__visc.tex [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] Underfull \vbox (badness 10000) has occurred while \output is active [] [1683] Underfull \vbox (badness 10000) has occurred while \output is active [] [1684] Underfull \vbox (badness 10000) has occurred while \output is active [] [1685] Underfull \vbox (badness 10000) has occurred while \output is active [] [1686] Underfull \vbox (badness 10000) has occurred while \output is active [] [1687] Underfull \vbox (badness 10000) has occurred while \output is active [] [1688] Underfull \vbox (badness 10000) has occurred while \output is active [] [1689] Underfull \vbox (badness 10000) has occurred while \output is active [] [1690] [1691] [1692] Underfull \vbox (badness 10000) has occurred while \output is active [] [1693] Underfull \vbox (badness 10000) has occurred while \output is active [] [1694] Underfull \vbox (badness 10000) has occurred while \output is active [] [1695] Underfull \vbox (badness 10000) has occurred while \output is active [] [1696] Underfull \vbox (badness 10000) has occurred while \output is active [] [1697] Underfull \vbox (badness 10000) has occurred while \output is active [] [1698] Underfull \vbox (badness 10000) has occurred while \output is active [] [1699] Underfull \vbox (badness 10000) has occurred while \output is active [] [1700] Underfull \vbox (badness 10000) has occurred while \output is active [] [1701] Underfull \vbox (badness 10000) has occurred while \output is active [] [1702] Underfull \vbox (badness 10000) has occurred while \output is active [] [1703] Underfull \vbox (badness 10000) has occurred while \output is active [] [1704] Underfull \vbox (badness 10000) has occurred while \output is active [] [1705] Underfull \vbox (badness 10000) has occurred while \output is active [] [1706] [1707] [1708]) (./namespacemom__horizontal__regridding.tex [1709] Underfull \hbox (badness 10000) in paragraph at lines 79--80 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [] [1710] [1711] [1712] Underfull \vbox (badness 10000) has occurred while \output is active [] [1713] [1714] [1715] Underfull \vbox (badness 10000) has occurred while \output is active [] [1716] Underfull \vbox (badness 10000) has occurred while \output is active [] [1717] Underfull \vbox (badness 10000) has occurred while \output is active [] [1718] [1719] [1720] Underfull \vbox (badness 10000) has occurred while \output is active [] [1721] Underfull \vbox (badness 10000) has occurred while \output is active [] [1722] Underfull \vbox (badness 10000) has occurred while \output is active [] [1723] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 x[] [] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] [] Overfull \hbox (1.47571pt too wide) in paragraph at lines 1109--1109 []\T1/phv/m/sl/10 y[] [] Overfull \hbox (1.97964pt too wide) in paragraph at lines 1109--1109 \T1/phv/m/sl/10 _[] [] [1724] Overfull \vbox (13.0991pt too high) has occurred while \output is active [] [1725] Overfull \vbox (52.21524pt too high) has occurred while \output is active [] [1726]) (./namespacemom__ice__shelf.tex [1727] [1728] [1729] [1730] Underfull \vbox (badness 10000) has occurred while \output is active [] [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] Underfull \vbox (badness 10000) has occurred while \output is active [] [1739] Underfull \vbox (badness 10000) has occurred while \output is active [] [1740] Underfull \vbox (badness 10000) has occurred while \output is active [] [1741] Underfull \vbox (badness 10000) has occurred while \output is active [] [1742] Underfull \vbox (badness 10000) has occurred while \output is active [] [1743] Underfull \vbox (badness 10000) has occurred while \output is active [] [1744] [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [] [1748] Underfull \vbox (badness 10000) has occurred while \output is active [] [1749] Underfull \vbox (badness 10000) has occurred while \output is active [] [1750] Underfull \vbox (badness 10000) has occurred while \output is active [] [1751] Underfull \vbox (badness 10000) has occurred while \output is active [] [1752] [1753] [1754] [1755]) (./namespacemom__ice__shelf__dynamics.tex [1756] [1757] [1758] Underfull \vbox (badness 10000) has occurred while \output is active [] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \vbox (badness 10000) has occurred while \output is active [] [1765] Underfull \vbox (badness 10000) has occurred while \output is active [] [1766] [1767] [1768] [1769] [1770] Underfull \vbox (badness 10000) has occurred while \output is active [] [1771] [1772] [1773] [1774] [1775] [1776] Underfull \vbox (badness 10000) has occurred while \output is active [] [1777] Overfull \vbox (13.57463pt too high) has occurred while \output is active [] [1778] [1779] [1780] [1781] Overfull \vbox (35.12973pt too high) has occurred while \output is active [] [1782] [1783] Overfull \vbox (30.19351pt too high) has occurred while \output is active [] [1784] [1785] [1786] Underfull \vbox (badness 10000) has occurred while \output is active [] [1787] Underfull \vbox (badness 10000) has occurred while \output is active [] [1788] Underfull \vbox (badness 10000) has occurred while \output is active [] [1789] [1790] Underfull \vbox (badness 10000) has occurred while \output is active [] [1791] Underfull \vbox (badness 10000) has occurred while \output is active [] [1792] Overfull \vbox (1.09367pt too high) has occurred while \output is active [] [1793] [1794] Underfull \hbox (badness 10000) detected at line 2775 [][][] [] [1795] [1796] [1797] [1798] Underfull \vbox (badness 10000) has occurred while \output is active [] [1799] Underfull \vbox (badness 10000) has occurred while \output is active [] [1800] Underfull \vbox (badness 10000) has occurred while \output is active [] [1801] Underfull \vbox (badness 10000) has occurred while \output is active [] [1802] [1803] [1804] [1805] [1806] Overfull \vbox (22.12805pt too high) has occurred while \output is active [] [1807] [1808] Underfull \vbox (badness 10000) has occurred while \output is active [] [1809] [1810] [1811] [1812] [1813] [1814] Underfull \vbox (badness 10000) has occurred while \output is active [] [1815]) (./namespacemom__ice__shelf__initialize.tex [1816] [1817] [1818] [1819] [1820]) (./namespacemom__ice__shelf__state.tex [1821]) (./namespacemom__int__tide__input.tex [1822] [1823] [1824] [1825] [1826] Underfull \vbox (badness 10000) has occurred while \output is active [] [1827] [1828] [1829]) (./namespacemom__interface__heights.tex [1830] [1831] Underfull \vbox (badness 10000) has occurred while \output is active [] [1832] [1833] Underfull \vbox (badness 10000) has occurred while \output is active [] [1834]) (./namespacemom__internal__tides.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [] [1835] Overfull \vbox (36.89885pt too high) has occurred while \output is active [] [1836] [1837] [1838] [1839] Underfull \vbox (badness 10000) has occurred while \output is active [] [1840] Underfull \vbox (badness 10000) has occurred while \output is active [] [1841] Underfull \vbox (badness 10000) has occurred while \output is active [] [1842] Underfull \vbox (badness 10000) has occurred while \output is active [] [1843] Underfull \vbox (badness 10000) has occurred while \output is active [] [1844] Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(inout) [] Underfull \hbox (badness 10000) in paragraph at lines 713--714 | \T1/pcr/m/n/8 real, dimension(g%isd[]:g%ied,g%jsd[]:g%jed,cs%nangle,cs%nfreq ,cs%nmode), intent(out) \T1/pcr/m/sl/8 T[] [] [1845] [1846] [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [] [1855] [1856] Underfull \vbox (badness 10000) has occurred while \output is active [] [1857] Underfull \vbox (badness 10000) has occurred while \output is active [] [1858] Underfull \vbox (badness 10000) has occurred while \output is active [] [1859] [1860] Underfull \vbox (badness 10000) has occurred while \output is active [] [1861] Underfull \vbox (badness 10000) has occurred while \output is active [] [1862] Underfull \vbox (badness 10000) has occurred while \output is active [] [1863] Underfull \vbox (badness 10000) has occurred while \output is active [] [1864] Underfull \vbox (badness 10000) has occurred while \output is active [] [1865] Overfull \vbox (21.70555pt too high) has occurred while \output is active [] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876]) (./namespacemom__intrinsic__functions.tex [1877]) (./namespacemom__io.tex [1878] [1879] [1880] Underfull \hbox (badness 10000) detected at line 94 [][][] [] Overfull \vbox (81.31973pt too high) has occurred while \output is active [] [1881] [1882] Underfull \vbox (badness 10000) has occurred while \output is active [] [1883] Underfull \vbox (badness 10000) has occurred while \output is active [] [1884] Underfull \hbox (badness 10000) detected at line 426 [][][] [] [1885] [1886] [1887] [1888] [1889] [1890] [1891] [1892] [1893] [1894] Underfull \hbox (badness 10000) detected at line 1056 [][][] [] [1895] Underfull \vbox (badness 10000) has occurred while \output is active [] [1896] [1897] [1898] [1899] Underfull \vbox (badness 10000) has occurred while \output is active [] [1900] [1901] [1902] Underfull \hbox (badness 10000) detected at line 1523 [][][] [] ) (./namespacemom__isopycnal__slopes.tex [1903] Overfull \vbox (20.40102pt too high) has occurred while \output is active [] [1904] [1905] Underfull \vbox (badness 10000) has occurred while \output is active [] [1906] Underfull \vbox (badness 10000) has occurred while \output is active [] [1907] Underfull \vbox (badness 10000) has occurred while \output is active [] [1908] [1909] [1910]) (./namespacemom__kappa__shear.tex [1911] [1912] [1913] [1914] Underfull \vbox (badness 10000) has occurred while \output is active [] [1915] Underfull \vbox (badness 10000) has occurred while \output is active [] [1916] [1917] [1918] Underfull \vbox (badness 10000) has occurred while \output is active [] [1919] Underfull \vbox (badness 10000) has occurred while \output is active [] [1920] [1921] [1922] Underfull \vbox (badness 10000) has occurred while \output is active [] [1923] [1924] [1925] Underfull \vbox (badness 10000) has occurred while \output is active [] [1926] Underfull \vbox (badness 10000) has occurred while \output is active [] [1927] Underfull \vbox (badness 10000) has occurred while \output is active [] [1928] Underfull \vbox (badness 10000) has occurred while \output is active [] [1929] Underfull \vbox (badness 10000) has occurred while \output is active [] [1930] Underfull \vbox (badness 10000) has occurred while \output is active [] [1931] [1932] [1933] [1934] Underfull \vbox (badness 10000) has occurred while \output is active [] [1935] Underfull \vbox (badness 10000) has occurred while \output is active [] [1936] Underfull \vbox (badness 10000) has occurred while \output is active [] [1937] Underfull \vbox (badness 10000) has occurred while \output is active [] [1938] [1939] Underfull \hbox (badness 10000) detected at line 2018 [][][] [] [1940] Underfull \vbox (badness 10000) has occurred while \output is active [] [1941] [1942]) (./namespacemom__lateral__boundary__diffusion.tex [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] Underfull \vbox (badness 10000) has occurred while \output is active [] [1951] Underfull \vbox (badness 10000) has occurred while \output is active [] [1952] [1953] [1954] Underfull \vbox (badness 10000) has occurred while \output is active [] [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [] [1958] Underfull \vbox (badness 10000) has occurred while \output is active [] [1959] [1960] [1961] Underfull \vbox (badness 10000) has occurred while \output is active [] [1962] Underfull \vbox (badness 10000) has occurred while \output is active [] [1963] Underfull \vbox (badness 10000) has occurred while \output is active [] [1964] Underfull \vbox (badness 10000) has occurred while \output is active [] [1965] [1966]) (./namespacemom__lateral__mixing__coeffs.tex [1967] [1968] [1969] [1970] [1971] Underfull \vbox (badness 10000) has occurred while \output is active [] [1972] [1973] Underfull \vbox (badness 10000) has occurred while \output is active [] [1974] Underfull \vbox (badness 10000) has occurred while \output is active [] [1975] [1976] [1977] [1978] Underfull \vbox (badness 10000) has occurred while \output is active [] [1979] [1980] [1981] Underfull \vbox (badness 10000) has occurred while \output is active [] [1982] [1983] [1984] Underfull \vbox (badness 10000) has occurred while \output is active [] [1985] Underfull \vbox (badness 10000) has occurred while \output is active [] [1986] Underfull \vbox (badness 10000) has occurred while \output is active [] [1987] Underfull \vbox (badness 10000) has occurred while \output is active [] [1988]) (./namespacemom__marine__ice.tex [1989] [1990] [1991] Overfull \vbox (43.3866pt too high) has occurred while \output is active [] [1992]) (./namespacemom__meke.tex [1993] [1994] [1995] [1996] [1997] [1998] [1999] [2000] Underfull \vbox (badness 10000) has occurred while \output is active [] [2001] [2002] [2003] [2004] Underfull \vbox (badness 10000) has occurred while \output is active [] [2005] Underfull \vbox (badness 10000) has occurred while \output is active [] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [] [2007] [2008] [2009] [2010] [2011] [2012] Underfull \vbox (badness 10000) has occurred while \output is active [] [2013] Underfull \vbox (badness 10000) has occurred while \output is active [] [2014] Underfull \vbox (badness 10000) has occurred while \output is active [] [2015] Underfull \vbox (badness 10000) has occurred while \output is active [] [2016] Underfull \vbox (badness 10000) has occurred while \output is active [] [2017] Underfull \vbox (badness 10000) has occurred while \output is active [] [2018]) (./namespacemom__mixed__layer__restrat.tex Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. Package hyperref Warning: Token not allowed in a PDF string (Unicode): (hyperref) removing `\char' on input line 13. [2019] [2020] [2021] [2022] Underfull \vbox (badness 10000) has occurred while \output is active [] [2023] [2024] Underfull \vbox (badness 10000) has occurred while \output is active [] [2025] [2026] [2027] Underfull \vbox (badness 10000) has occurred while \output is active [] [2028] Underfull \vbox (badness 10000) has occurred while \output is active [] [2029] Underfull \vbox (badness 10000) has occurred while \output is active [] [2030] Underfull \vbox (badness 10000) has occurred while \output is active [] [2031] Underfull \vbox (badness 10000) has occurred while \output is active [] [2032] [2033] Underfull \vbox (badness 10000) has occurred while \output is active [] [2034] [2035]) (./namespacemom__neutral__diffusion.tex [2036] [2037] Overfull \hbox (120.57199pt too wide) in paragraph at lines 53--53 []\T1/phv/m/sl/9 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/9 ^^A\OML/cmm/m/it/9 ^^Z \OT1/cmr/m/n/9 = [] []$\T1/phv/m /sl/9 . [] [2038] Underfull \hbox (badness 10000) detected at line 122 [][][] [] [2039] Underfull \hbox (badness 10000) detected at line 170 [][][] [] [2040] [2041] [2042] Overfull \hbox (132.78908pt too wide) in paragraph at lines 352--353 []\T1/phv/m/n/10 Calculate delta rho from deriva-tives and gra-di-ents of prop- er-ties $\OT1/cmr/m/n/10 ^^A\OML/cmm/m/it/10 ^^Z \OT1/cmr/m/n/10 = [] []$\T1/ph v/m/n/10 . [] [2043] Underfull \hbox (badness 10000) detected at line 432 [][][] [] [2044] Underfull \vbox (badness 10000) has occurred while \output is active [] [2045] [2046] Underfull \hbox (badness 10000) detected at line 573 [][][] [] [2047] [2048] [2049] Underfull \vbox (badness 10000) has occurred while \output is active [] [2050] Underfull \vbox (badness 10000) has occurred while \output is active [] [2051] [2052] [2053] Underfull \vbox (badness 10000) has occurred while \output is active [] [2054] Underfull \vbox (badness 10000) has occurred while \output is active [] [2055] Underfull \vbox (badness 10000) has occurred while \output is active [] [2056] [2057] [2058] [2059] [2060] [2061] [2062] [2063] Underfull \vbox (badness 10000) has occurred while \output is active [] [2064] Underfull \vbox (badness 10000) has occurred while \output is active [] [2065] Underfull \vbox (badness 10000) has occurred while \output is active [] [2066] [2067] Underfull \vbox (badness 10000) has occurred while \output is active [] [2068] Underfull \vbox (badness 10000) has occurred while \output is active [] [2069] [2070] [2071] Underfull \vbox (badness 10000) has occurred while \output is active [] [2072] [2073] [2074] [2075] Underfull \vbox (badness 10000) has occurred while \output is active [] [2076] Underfull \vbox (badness 10000) has occurred while \output is active [] [2077] [2078] [2079] Underfull \vbox (badness 10000) has occurred while \output is active [] [2080] [2081] [2082] Underfull \vbox (badness 10000) has occurred while \output is active [] [2083] [2084] [2085] [2086] [2087] [2088] [2089] [2090] [2091] [2092] [2093] [2094] [2095] [2096] [2097] [2098] [2099] [2100]) (./namespacemom__obsolete__diagnostics.tex [2101] [2102]) (./namespacemom__obsolete__params.tex [2103] [2104] [2105] [2106] [2107]) (./namespacemom__ocmip2__cfc.tex [2108] [2109] [2110] [2111] [2112] Overfull \vbox (4.64684pt too high) has occurred while \output is active [] [2113] [2114] [2115] Underfull \hbox (badness 10000) detected at line 445 [][][] [] [2116] [2117] [2118] Underfull \vbox (badness 10000) has occurred while \output is active [] [2119] Underfull \vbox (badness 10000) has occurred while \output is active [] [2120]) (./namespaceMOM__oda__driver__mod.tex) (./namespacemom__oda__driver__mod.tex [2121] [2122] [2123] [2124] [2125] Underfull \vbox (badness 10000) has occurred while \output is active [] [2126] Underfull \vbox (badness 10000) has occurred while \output is active [] [2127] [2128] [2129] Overfull \vbox (67.32932pt too high) has occurred while \output is active [] [2130]) (./namespacemom__offline__aux.tex [2131] Overfull \vbox (15.37663pt too high) has occurred while \output is active [] [2132] [2133] [2134] [2135] [2136] [2137] Overfull \vbox (5.58195pt too high) has occurred while \output is active [] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \vbox (badness 10000) has occurred while \output is active [] [2148]) (./namespacemom__offline__main.tex [2149] [2150] [2151] [2152] Overfull \vbox (11.18053pt too high) has occurred while \output is active [] [2153] Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isdb[]: cs%g %iedb, cs%g %jsd[]: cs%g % jed, cs%g %ke), intent(inout) [] Overfull \hbox (16.87454pt too wide) in paragraph at lines 260--261 | \T1/pcr/m/n/8 real, dimension( cs%g %isd[]: cs%g %ied, cs%g %jsdb[]: cs%g %j edb, cs%g %ke), intent(inout) [] [2154] [2155] Underfull \vbox (badness 10000) has occurred while \output is active [] [2156] [2157] [2158] Underfull \vbox (badness 10000) has occurred while \output is active [] [2159] [2160] [2161] [2162] [2163] [2164] [2165] Underfull \vbox (badness 10000) has occurred while \output is active [] [2166] [2167] [2168] Underfull \vbox (badness 10000) has occurred while \output is active [] [2169] Underfull \vbox (badness 10000) has occurred while \output is active [] [2170] [2171] [2172] [2173] [2174] [2175]) (./namespacemom__opacity.tex [2176] [2177] [2178] [2179] Underfull \vbox (badness 10000) has occurred while \output is active [] [2180] Underfull \vbox (badness 10000) has occurred while \output is active [] [2181] Underfull \vbox (badness 10000) has occurred while \output is active [] [2182] Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied, gv %ke ), intent(out), optional [] Underfull \hbox (badness 10000) in paragraph at lines 447--448 | \T1/pcr/m/n/8 real, dimension(max(optics%nbands,1), g %isd[]: g %ied), inten t(out), optional \T1/pcr/m/sl/8 pen[]S[]W[] [] [2183] [2184] Underfull \hbox (badness 10000) in paragraph at lines 548--549 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional [] Overfull \vbox (50.97925pt too high) has occurred while \output is active [] [2185] [2186] Underfull \vbox (badness 10000) has occurred while \output is active [] [2187] [2188] Underfull \vbox (badness 10000) has occurred while \output is active [] [2189] Underfull \vbox (badness 10000) has occurred while \output is active [] [2190] Underfull \hbox (badness 10000) detected at line 1009 [][][] [] [2191] Underfull \hbox (badness 10000) detected at line 1039 [][][] [] Underfull \hbox (badness 10000) detected at line 1079 [][][] [] Underfull \hbox (badness 10000) in paragraph at lines 1098--1099 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke), intent(in), optional [] [2192] [2193] Underfull \vbox (badness 10000) has occurred while \output is active [] [2194] [2195] [2196] [2197] Underfull \hbox (badness 10000) detected at line 1460 [][][] [] ) (./namespacemom__open__boundary.tex [2198] [2199] [2200] Underfull \hbox (badness 862) in paragraph at lines 120--121 []\T1/phv/m/n/10 subroutine, pub-lic [] (HI, GV, O[]BC, Reg, param[]_[]file, re start[]_[][]C[]Sp, use[]_[] [] [2201] Underfull \hbox (badness 10000) detected at line 187 [][][] [] [2202] Underfull \vbox (badness 10000) has occurred while \output is active [] [2203] [2204] [2205] Underfull \vbox (badness 10000) has occurred while \output is active [] [2206] [2207] [2208] [2209] [2210] [2211] Underfull \vbox (badness 10000) has occurred while \output is active [] [2212] [2213] [2214] Underfull \vbox (badness 10000) has occurred while \output is active [] [2215] Underfull \vbox (badness 10000) has occurred while \output is active [] [2216] Underfull \vbox (badness 10000) has occurred while \output is active [] [2217] [2218] [2219] Underfull \vbox (badness 10000) has occurred while \output is active [] [2220] [2221] Overfull \vbox (39.93549pt too high) has occurred while \output is active [] [2222] [2223] Underfull \vbox (badness 10000) has occurred while \output is active [] [2224] Underfull \vbox (badness 10000) has occurred while \output is active [] [2225] [2226] [2227] [2228] [2229] Underfull \vbox (badness 10000) has occurred while \output is active [] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \vbox (badness 10000) has occurred while \output is active [] [2241] [2242] Underfull \vbox (badness 10000) has occurred while \output is active [] [2243] [2244] Underfull \vbox (badness 10000) has occurred while \output is active [] [2245] Underfull \vbox (badness 10000) has occurred while \output is active [] [2246] Underfull \vbox (badness 10000) has occurred while \output is active [] [2247] Underfull \vbox (badness 10000) has occurred while \output is active [] [2248] Underfull \vbox (badness 10000) has occurred while \output is active [] [2249] Underfull \vbox (badness 10000) has occurred while \output is active [] [2250] Underfull \vbox (badness 10000) has occurred while \output is active [] [2251] Underfull \vbox (badness 10000) has occurred while \output is active [] [2252] Underfull \vbox (badness 10000) has occurred while \output is active [] [2253] Underfull \vbox (badness 10000) has occurred while \output is active [] [2254] Underfull \vbox (badness 10000) has occurred while \output is active [] [2255] Underfull \vbox (badness 10000) has occurred while \output is active [] [2256] Underfull \vbox (badness 10000) has occurred while \output is active [] [2257] [2258] [2259] [2260] [2261] [2262] [2263] Overfull \vbox (46.04994pt too high) has occurred while \output is active [] [2264] [2265] [2266] [2267] [2268] [2269] [2270] Underfull \vbox (badness 10000) has occurred while \output is active [] [2271] [2272] Underfull \vbox (badness 10000) has occurred while \output is active [] [2273] Overfull \vbox (6.87355pt too high) has occurred while \output is active [] [2274] [2275] [2276] [2277] [2278] Underfull \vbox (badness 10000) has occurred while \output is active [] [2279] Underfull \vbox (badness 10000) has occurred while \output is active [] [2280] Underfull \vbox (badness 10000) has occurred while \output is active [] [2281] Underfull \vbox (badness 10000) has occurred while \output is active [] [2282] Underfull \vbox (badness 10000) has occurred while \output is active [] [2283] Underfull \vbox (badness 10000) has occurred while \output is active [] [2284] Underfull \vbox (badness 10000) has occurred while \output is active [] [2285] [2286] [2287]) (./namespacemom__pointaccel.tex [2288] [2289] Underfull \hbox (badness 10000) in paragraph at lines 118--119 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv [] [2290] [2291] Underfull \vbox (badness 10000) has occurred while \output is active [] [2292] Underfull \vbox (badness 10000) has occurred while \output is active [] [2293] Underfull \vbox (badness 10000) has occurred while \output is active [] [2294] Underfull \hbox (badness 10000) in paragraph at lines 497--498 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), optional \T1/pcr/m/sl/8 hv [] [2295] [2296] Underfull \vbox (badness 10000) has occurred while \output is active [] [2297] Underfull \vbox (badness 10000) has occurred while \output is active [] [2298] Underfull \vbox (badness 10000) has occurred while \output is active [] [2299]) (./namespacemom__pressureforce.tex Underfull \hbox (badness 10000) in paragraph at lines 29--30 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [] [2300] [2301] [2302]) (./namespacemom__pressureforce__fv.tex [2303] [2304] [2305] Underfull \vbox (badness 10000) has occurred while \output is active [] [2306] Underfull \vbox (badness 10000) has occurred while \output is active [] [2307] Underfull \vbox (badness 10000) has occurred while \output is active [] [2308] Underfull \vbox (badness 10000) has occurred while \output is active [] [2309] [2310] [2311] [2312] [2313] Underfull \vbox (badness 10000) has occurred while \output is active [] [2314] Underfull \vbox (badness 10000) has occurred while \output is active [] [2315] Underfull \vbox (badness 10000) has occurred while \output is active [] [2316]) (./namespacemom__pressureforce__mont.tex [2317] [2318] [2319] Underfull \vbox (badness 10000) has occurred while \output is active [] [2320] Underfull \vbox (badness 10000) has occurred while \output is active [] [2321] [2322] [2323] [2324] [2325] Underfull \vbox (badness 10000) has occurred while \output is active [] [2326] Underfull \vbox (badness 10000) has occurred while \output is active [] [2327] Underfull \vbox (badness 10000) has occurred while \output is active [] [2328] [2329] [2330] [2331] [2332]) (./namespacemom__random.tex [2333] [2334] [2335] [2336] [2337] [2338] Underfull \vbox (badness 10000) has occurred while \output is active [] [2339] [2340] Underfull \vbox (badness 10000) has occurred while \output is active [] [2341] [2342] [2343]) (./namespacemom__regridding.tex [2344] [2345] Underfull \hbox (badness 1173) in paragraph at lines 78--79 \T1/phv/m/n/10 _[]scheme, depth[]_[]of[]_[]time[]_[]filter[]_[]shallow, depth[] _[]of[]_[]time[]_[]filter[]_[]deep, compress[]_[]fraction, ref[]_[]pressure, dz []_[] [] Underfull \hbox (badness 1661) in paragraph at lines 78--79 \T1/phv/m/n/10 min[]_[]surface, nz[]_[]fixed[]_[]surface, Rho[]_[][]M[]L[]_[]av g[]_[]depth, nlay[]_[][]M[]L[]_[]to[]_[]interior, fix[]_[]haloclines, halocline []_[]filt[]_[]len, [] [2346] [2347] Underfull \hbox (badness 10000) in paragraph at lines 202--203 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [] [2348] [2349] [2350] Underfull \vbox (badness 10000) has occurred while \output is active [] [2351] Underfull \hbox (badness 10000) detected at line 425 [][][] [] [2352] [2353] [2354] Underfull \hbox (badness 10000) in paragraph at lines 627--628 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, gv %ke+1) , intent(inout) \T1/pcr/m/sl/8 dz[] [] [2355] Underfull \vbox (badness 10000) has occurred while \output is active [] [2356] [2357] [2358] [2359] Overfull \hbox (20.61044pt too wide) in paragraph at lines 1007--1008 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed,cs%nk), in tent(inout) \T1/pcr/m/sl/8 h[]_[]new \T1/pcr/m/n/8 ) [private] [] [2360] Overfull \vbox (26.79585pt too high) has occurred while \output is active [] [2361] [2362] [2363] Overfull \vbox (35.17787pt too high) has occurred while \output is active [] [2364] [2365] [2366] [2367] Underfull \vbox (badness 10000) has occurred while \output is active [] [2368] [2369] [2370] Underfull \hbox (badness 10000) detected at line 1728 [][][] [] [2371] [2372] [2373] Underfull \hbox (badness 10000) detected at line 1925 [][][] [] [2374] [2375] [2376] [2377] Underfull \vbox (badness 10000) has occurred while \output is active [] [2378] Underfull \vbox (badness 10000) has occurred while \output is active [] [2379] Underfull \vbox (badness 10000) has occurred while \output is active [] [2380] Underfull \vbox (badness 10000) has occurred while \output is active [] [2381] Underfull \vbox (badness 10000) has occurred while \output is active [] [2382] Underfull \vbox (badness 10000) has occurred while \output is active [] [2383] [2384] Underfull \vbox (badness 10000) has occurred while \output is active [] [2385] [2386] [2387] [2388] [2389] Underfull \vbox (badness 10000) has occurred while \output is active [] [2390] [2391] [2392] Underfull \hbox (badness 10000) detected at line 3307 [][][] [] [2393]) (./namespacemom__regularize__layers.tex [2394] [2395] Underfull \vbox (badness 10000) has occurred while \output is active [] [2396] [2397] [2398] [2399] [2400] [2401] Underfull \vbox (badness 10000) has occurred while \output is active [] [2402] Underfull \vbox (badness 10000) has occurred while \output is active [] [2403] Underfull \vbox (badness 10000) has occurred while \output is active [] [2404] Underfull \vbox (badness 10000) has occurred while \output is active [] [2405] Underfull \vbox (badness 10000) has occurred while \output is active [] [2406]) (./namespacemom__remapping.tex [2407] Underfull \hbox (badness 6893) in paragraph at lines 14--15 []\T1/phv/m/n/10 subroutine, pub-lic [] (CS, remapping[]_[]scheme, boundary[]_[ ]extrapolation, check[]_[] [] [2408] [2409] [2410] [2411] [2412] [2413] [2414] [2415] [2416] [2417] [2418] [2419] [2420] Underfull \vbox (badness 10000) has occurred while \output is active [] [2421] Underfull \vbox (badness 10000) has occurred while \output is active [] [2422] Underfull \vbox (badness 10000) has occurred while \output is active [] [2423] Underfull \hbox (badness 10000) detected at line 1070 [][][] [] Underfull \hbox (badness 10000) detected at line 1084 [][][] [] [2424] [2425] Underfull \vbox (badness 10000) has occurred while \output is active [] [2426] [2427] [2428] Underfull \vbox (badness 10000) has occurred while \output is active [] [2429] Underfull \vbox (badness 10000) has occurred while \output is active [] [2430] Underfull \vbox (badness 10000) has occurred while \output is active [] [2431] Underfull \vbox (badness 10000) has occurred while \output is active [] [2432] [2433] [2434] [2435] Overfull \vbox (25.43697pt too high) has occurred while \output is active [] [2436] [2437] [2438] [2439] [2440] Underfull \vbox (badness 10000) has occurred while \output is active [] [2441] Underfull \vbox (badness 10000) has occurred while \output is active [] [2442] Underfull \vbox (badness 10000) has occurred while \output is active [] [2443] [2444] [2445]) (./namespacemom__restart.tex [2446] [2447] [2448] Underfull \hbox (badness 10000) detected at line 130 [][][] [] [2449] Underfull \hbox (badness 10000) detected at line 236 [][][] [] [2450] Underfull \hbox (badness 10000) detected at line 285 [][][] [] [2451] Underfull \vbox (badness 10000) has occurred while \output is active [] [2452] [2453] [2454] [2455] [2456] [2457] [2458] Overfull \vbox (1.02933pt too high) has occurred while \output is active [] [2459] [2460] [2461] [2462] [2463] [2464] [2465] [2466] [2467] [2468] [2469] Underfull \vbox (badness 10000) has occurred while \output is active [] [2470] [2471] [2472] Underfull \vbox (badness 10000) has occurred while \output is active [] [2473] [2474] Underfull \hbox (badness 10000) detected at line 1833 [][][] [] Underfull \vbox (badness 10000) has occurred while \output is active [] [2475] [2476] Underfull \vbox (badness 10000) has occurred while \output is active [] [2477] [2478] Underfull \vbox (badness 10000) has occurred while \output is active [] [2479] [2480] [2481] Underfull \vbox (badness 10000) has occurred while \output is active [] [2482] Underfull \vbox (badness 10000) has occurred while \output is active [] [2483]) (./namespacemom__safe__alloc.tex [2484] Overfull \vbox (34.4091pt too high) has occurred while \output is active [] [2485] [2486] Underfull \vbox (badness 10000) has occurred while \output is active [] [2487] [2488] [2489]) (./namespacemom__set__diffusivity.tex [2490] [2491] [2492] Underfull \vbox (badness 10000) has occurred while \output is active [] [2493] Underfull \vbox (badness 10000) has occurred while \output is active [] [2494] [2495] [2496] Underfull \vbox (badness 10000) has occurred while \output is active [] [2497] [2498] [2499] Underfull \vbox (badness 10000) has occurred while \output is active [] [2500] [2501] [2502] [2503] [2504] Underfull \vbox (badness 10000) has occurred while \output is active [] [2505] [2506] [2507] Underfull \vbox (badness 10000) has occurred while \output is active [] [2508] [2509] [2510] Underfull \vbox (badness 10000) has occurred while \output is active [] [2511] [2512] [2513] [2514] Overfull \vbox (17.73967pt too high) has occurred while \output is active [] [2515] [2516] Underfull \vbox (badness 10000) has occurred while \output is active [] [2517] Underfull \vbox (badness 10000) has occurred while \output is active [] [2518] Underfull \vbox (badness 10000) has occurred while \output is active [] [2519] Underfull \vbox (badness 10000) has occurred while \output is active [] [2520] Underfull \vbox (badness 10000) has occurred while \output is active [] [2521] [2522] [2523] [2524] Underfull \vbox (badness 10000) has occurred while \output is active [] [2525] Underfull \vbox (badness 10000) has occurred while \output is active [] [2526] Underfull \vbox (badness 10000) has occurred while \output is active [] [2527]) (./namespacemom__set__visc.tex [2528] [2529] Underfull \hbox (badness 10000) detected at line 64 [][][] [] [2530] Underfull \hbox (badness 10000) detected at line 143 [][][] [] [2531] [2532] [2533] [2534] Underfull \vbox (badness 10000) has occurred while \output is active [] [2535] Underfull \vbox (badness 10000) has occurred while \output is active [] [2536] Underfull \vbox (badness 10000) has occurred while \output is active [] [2537] Overfull \vbox (5.91666pt too high) has occurred while \output is active [] [2538] [2539] Underfull \hbox (badness 1270) in paragraph at lines 752--752 \T1/phv/m/n/10 so that $\OML/cmm/m/it/10 C[]\OMS/cmsy/m/n/10 j\OML/cmm/m/it/10 U[]\OMS/cmsy/m/n/10 j$ \T1/phv/m/n/10 be-comes a Rayleigh bot-tom drag. Oth-er- wise $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/10 U[]\OMS/cmsy/m/n/10 j$ \T1/phv/m/n/10 is found by av-er-ag-ing the flow over [] Underfull \hbox (badness 900) in paragraph at lines 752--752 \T1/phv/m/n/10 the bot-tom [] of the model, adding the am-pli-tude of tides [] and a con-stant [] [2540] [2541] Underfull \vbox (badness 10000) has occurred while \output is active [] [2542] Underfull \vbox (badness 10000) has occurred while \output is active [] [2543] Underfull \vbox (badness 10000) has occurred while \output is active [] [2544] Underfull \vbox (badness 10000) has occurred while \output is active [] [2545] Underfull \vbox (badness 10000) has occurred while \output is active [] [2546] Underfull \vbox (badness 10000) has occurred while \output is active [] [2547] Underfull \vbox (badness 10000) has occurred while \output is active [] [2548] Underfull \vbox (badness 10000) has occurred while \output is active [] [2549] Underfull \vbox (badness 10000) has occurred while \output is active [] [2550] Underfull \vbox (badness 10000) has occurred while \output is active [] [2551] Underfull \vbox (badness 10000) has occurred while \output is active [] [2552] [2553] [2554] Underfull \vbox (badness 10000) has occurred while \output is active [] [2555] Underfull \vbox (badness 10000) has occurred while \output is active [] [2556] Underfull \vbox (badness 10000) has occurred while \output is active [] [2557] Underfull \vbox (badness 10000) has occurred while \output is active [] [2558] Underfull \vbox (badness 10000) has occurred while \output is active [] [2559] Underfull \vbox (badness 10000) has occurred while \output is active [] [2560] Underfull \vbox (badness 10000) has occurred while \output is active [] [2561]) (./namespacemom__shared__initialization.tex [2562] [2563] [2564] [2565] Underfull \hbox (badness 10000) detected at line 255 [][][] [] [2566] [2567] [2568] [2569] Underfull \vbox (badness 10000) has occurred while \output is active [] [2570] [2571] Underfull \hbox (badness 10000) detected at line 652 [][][] [] [2572] [2573] [2574] [2575] [2576] [2577] Underfull \vbox (badness 10000) has occurred while \output is active [] [2578] Underfull \vbox (badness 10000) has occurred while \output is active [] [2579] [2580] [2581] [2582] [2583] [2584] [2585] [2586] Underfull \vbox (badness 10000) has occurred while \output is active [] [2587]) (./namespacemom__spatial__means.tex [2588] [2589] Underfull \hbox (badness 10000) detected at line 125 [][][] [] [2590] [2591] [2592] [2593] Underfull \vbox (badness 10000) has occurred while \output is active [] [2594] [2595] Underfull \hbox (badness 10000) detected at line 520 [][][] [] [2596] Underfull \hbox (badness 10000) detected at line 595 [][][] [] ) (./namespacemom__sponge.tex [2597] [2598] [2599] Underfull \vbox (badness 10000) has occurred while \output is active [] [2600] Underfull \vbox (badness 10000) has occurred while \output is active [] [2601] Underfull \vbox (badness 10000) has occurred while \output is active [] [2602] [2603] [2604] [2605] [2606] [2607]) (./namespacemom__state__initialization.tex [2608] [2609] Underfull \hbox (badness 10000) detected at line 79 [][][] [] Overfull \vbox (10.7031pt too high) has occurred while \output is active [] [2610] [2611] Underfull \vbox (badness 10000) has occurred while \output is active [] [2612] [2613] Underfull \vbox (badness 10000) has occurred while \output is active [] [2614] [2615] [2616] [2617] [2618] [2619] [2620] Underfull \vbox (badness 10000) has occurred while \output is active [] [2621] Underfull \vbox (badness 10000) has occurred while \output is active [] [2622] [2623] [2624] [2625] [2626] Underfull \hbox (badness 10000) detected at line 1251 [][][] [] [2627] [2628] [2629] [2630] [2631] [2632] [2633] [2634] [2635] [2636] [2637] [2638] Underfull \vbox (badness 10000) has occurred while \output is active [] [2639] Underfull \vbox (badness 10000) has occurred while \output is active [] [2640] Underfull \vbox (badness 10000) has occurred while \output is active [] [2641] Underfull \vbox (badness 10000) has occurred while \output is active [] [2642] Underfull \vbox (badness 10000) has occurred while \output is active [] [2643] Underfull \vbox (badness 10000) has occurred while \output is active [] [2644] [2645] [2646] Underfull \vbox (badness 10000) has occurred while \output is active [] [2647] Underfull \vbox (badness 10000) has occurred while \output is active [] [2648] Underfull \vbox (badness 10000) has occurred while \output is active [] [2649] Underfull \vbox (badness 10000) has occurred while \output is active [] [2650] Underfull \vbox (badness 10000) has occurred while \output is active [] [2651] [2652] Overfull \vbox (22.57013pt too high) has occurred while \output is active [] [2653] [2654]) (./namespacemom__string__functions.tex [2655] [2656] [2657] [2658] [2659] Underfull \hbox (badness 10000) detected at line 283 [][][] [] Underfull \hbox (badness 10000) detected at line 314 [][][] [] [2660] Underfull \hbox (badness 10000) detected at line 351 [][][] [] [2661] Underfull \hbox (badness 10000) detected at line 426 [][][] [] [2662] [2663] Underfull \hbox (badness 10000) detected at line 601 [][][] [] [2664] [2665] [2666] Underfull \hbox (badness 10000) detected at line 774 [][][] [] ) (./namespacemom__sum__output.tex [2667] [2668] [2669] Underfull \vbox (badness 10000) has occurred while \output is active [] [2670] [2671] Underfull \vbox (badness 10000) has occurred while \output is active [] [2672] [2673] [2674] Underfull \vbox (badness 10000) has occurred while \output is active [] [2675] [2676] [2677] [2678] Underfull \vbox (badness 10000) has occurred while \output is active [] [2679] [2680] [2681] [2682] Underfull \vbox (badness 10000) has occurred while \output is active [] [2683] Underfull \vbox (badness 10000) has occurred while \output is active [] [2684] Underfull \vbox (badness 10000) has occurred while \output is active [] [2685] Underfull \vbox (badness 10000) has occurred while \output is active [] [2686] Underfull \vbox (badness 10000) has occurred while \output is active [] [2687] Underfull \vbox (badness 10000) has occurred while \output is active [] [2688] Underfull \vbox (badness 10000) has occurred while \output is active [] [2689]) (./namespacemom__surface__forcing.tex [2690] [2691] [2692] [2693] Underfull \vbox (badness 10000) has occurred while \output is active [] [2694] [2695] [2696] Underfull \vbox (badness 10000) has occurred while \output is active [] [2697] Underfull \vbox (badness 10000) has occurred while \output is active [] [2698] [2699] [2700] [2701] [2702] [2703] [2704] [2705] [2706] Underfull \vbox (badness 10000) has occurred while \output is active [] [2707] [2708] [2709] Underfull \vbox (badness 10000) has occurred while \output is active [] [2710] Underfull \vbox (badness 10000) has occurred while \output is active [] [2711] Underfull \vbox (badness 10000) has occurred while \output is active [] [2712] Underfull \vbox (badness 10000) has occurred while \output is active [] [2713] Underfull \vbox (badness 10000) has occurred while \output is active [] [2714] [2715] [2716] [2717] Overfull \vbox (27.8983pt too high) has occurred while \output is active [] [2718] Overfull \vbox (14.28166pt too high) has occurred while \output is active [] [2719] [2720] [2721] [2722]) (./namespacemom__tfreeze.tex [2723] [2724] [2725] [2726] [2727]) (./namespacemom__thickness__diffuse.tex [2728] [2729] [2730] [2731] Underfull \vbox (badness 10000) has occurred while \output is active [] [2732] Underfull \vbox (badness 10000) has occurred while \output is active [] [2733] Underfull \vbox (badness 10000) has occurred while \output is active [] [2734] Underfull \vbox (badness 10000) has occurred while \output is active [] [2735] Underfull \vbox (badness 10000) has occurred while \output is active [] [2736] [2737] [2738] Underfull \vbox (badness 10000) has occurred while \output is active [] [2739] Underfull \vbox (badness 10000) has occurred while \output is active [] [2740] Underfull \vbox (badness 10000) has occurred while \output is active [] [2741] Underfull \vbox (badness 10000) has occurred while \output is active [] [2742] Underfull \vbox (badness 10000) has occurred while \output is active [] [2743] [2744] [2745] Underfull \vbox (badness 10000) has occurred while \output is active [] [2746] Underfull \vbox (badness 10000) has occurred while \output is active [] [2747] Underfull \vbox (badness 10000) has occurred while \output is active [] [2748] Underfull \vbox (badness 10000) has occurred while \output is active [] [2749] Underfull \vbox (badness 10000) has occurred while \output is active [] [2750] Underfull \vbox (badness 10000) has occurred while \output is active [] [2751] Underfull \vbox (badness 10000) has occurred while \output is active [] [2752] Underfull \vbox (badness 10000) has occurred while \output is active [] [2753] Underfull \vbox (badness 10000) has occurred while \output is active [] [2754] Underfull \vbox (badness 10000) has occurred while \output is active [] [2755] [2756] [2757] [2758] Underfull \vbox (badness 10000) has occurred while \output is active [] [2759]) (./namespacemom__tidal__forcing.tex [2760] [2761] [2762] [2763] [2764] [2765] Underfull \vbox (badness 10000) has occurred while \output is active [] [2766] Underfull \vbox (badness 10000) has occurred while \output is active [] [2767] Underfull \vbox (badness 10000) has occurred while \output is active [] [2768]) (./namespacemom__tidal__mixing.tex [2769] [2770] [2771] [2772] Underfull \vbox (badness 10000) has occurred while \output is active [] [2773] Underfull \vbox (badness 10000) has occurred while \output is active [] [2774] Underfull \vbox (badness 10000) has occurred while \output is active [] [2775] Underfull \vbox (badness 10000) has occurred while \output is active [] [2776] Underfull \vbox (badness 10000) has occurred while \output is active [] [2777] [2778] Underfull \vbox (badness 10000) has occurred while \output is active [] [2779] Underfull \vbox (badness 10000) has occurred while \output is active [] [2780] [2781] [2782] [2783] Overfull \vbox (10.48775pt too high) has occurred while \output is active [] [2784] [2785] [2786] [2787] Underfull \vbox (badness 10000) has occurred while \output is active [] [2788] [2789] [2790] Underfull \vbox (badness 10000) has occurred while \output is active [] [2791] Underfull \vbox (badness 10000) has occurred while \output is active [] [2792] Underfull \vbox (badness 10000) has occurred while \output is active [] [2793] Underfull \vbox (badness 10000) has occurred while \output is active [] [2794] Underfull \vbox (badness 10000) has occurred while \output is active [] [2795]) (./namespacemom__time__manager.tex Underfull \hbox (badness 10000) detected at line 24 [][][] [] [2796]) (./namespacemom__tracer__advect.tex [2797] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(in), optional \T1/pcr/m/sl/8 h[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(out), optional [] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(out), optional [] Underfull \hbox (badness 10000) in paragraph at lines 52--53 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional \T1/pcr/m/sl/8 h[]_[] [] [2798] [2799] Underfull \vbox (badness 10000) has occurred while \output is active [] [2800] Underfull \vbox (badness 10000) has occurred while \output is active [] [2801] Underfull \vbox (badness 10000) has occurred while \output is active [] [2802] [2803] [2804] Underfull \vbox (badness 10000) has occurred while \output is active [] [2805] Underfull \vbox (badness 10000) has occurred while \output is active [] [2806] Underfull \vbox (badness 10000) has occurred while \output is active [] [2807] [2808] [2809] Underfull \vbox (badness 10000) has occurred while \output is active [] [2810] Underfull \vbox (badness 10000) has occurred while \output is active [] [2811] Underfull \vbox (badness 10000) has occurred while \output is active [] [2812] Underfull \vbox (badness 10000) has occurred while \output is active [] [2813] [2814] [2815]) (./namespacemom__tracer__diabatic.tex [2816] [2817] Underfull \vbox (badness 10000) has occurred while \output is active [] [2818] Underfull \vbox (badness 10000) has occurred while \output is active [] [2819] Underfull \hbox (badness 10000) in paragraph at lines 285--286 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed), intent(i nout), optional \T1/pcr/m/sl/8 btm[]_[] [] Overfull \vbox (1.75337pt too high) has occurred while \output is active [] [2820] [2821] Underfull \vbox (badness 10000) has occurred while \output is active [] [2822]) (./namespaceMOM__tracer__flow__control.tex) (./namespacemom__tracer__flow__control.tex [2823] [2824] [2825] Underfull \vbox (badness 10000) has occurred while \output is active [] [2826] [2827] [2828] [2829] [2830] [2831] [2832] Underfull \vbox (badness 10000) has occurred while \output is active [] [2833] [2834] [2835] [2836] [2837] [2838]) (./namespacemom__tracer__hor__diff.tex [2839] [2840] [2841] Underfull \vbox (badness 10000) has occurred while \output is active [] [2842] Underfull \vbox (badness 10000) has occurred while \output is active [] [2843] Underfull \vbox (badness 10000) has occurred while \output is active [] [2844] Underfull \vbox (badness 10000) has occurred while \output is active [] [2845] Underfull \vbox (badness 10000) has occurred while \output is active [] [2846] Underfull \vbox (badness 10000) has occurred while \output is active [] [2847] Underfull \vbox (badness 10000) has occurred while \output is active [] [2848] Underfull \vbox (badness 10000) has occurred while \output is active [] [2849] Underfull \vbox (badness 10000) has occurred while \output is active [] [2850] Underfull \vbox (badness 10000) has occurred while \output is active [] [2851] [2852] [2853] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed), intent (in), optional \T1/pcr/m/sl/8 read[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 1130--1131 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb), intent (in), optional \T1/pcr/m/sl/8 read[]_[] [] [2854] [2855] Underfull \vbox (badness 10000) has occurred while \output is active [] [2856] Underfull \vbox (badness 10000) has occurred while \output is active [] [2857] Underfull \vbox (badness 10000) has occurred while \output is active [] [2858] Underfull \vbox (badness 10000) has occurred while \output is active [] [2859] Underfull \vbox (badness 10000) has occurred while \output is active [] [2860]) (./namespacemom__tracer__initialization__from__z.tex [2861] Underfull \vbox (badness 10000) has occurred while \output is active [] [2862] [2863]) (./namespacemom__tracer__registry.tex Underfull \vbox (badness 10000) has occurred while \output is active [] [2864] [2865] Underfull \vbox (badness 10000) has occurred while \output is active [] [2866] [2867] [2868] [2869] [2870] [2871] [2872] [2873] Underfull \vbox (badness 10000) has occurred while \output is active [] [2874] [2875] [2876] Underfull \vbox (badness 10000) has occurred while \output is active [] [2877] Underfull \vbox (badness 10000) has occurred while \output is active [] [2878] Underfull \vbox (badness 10000) has occurred while \output is active [] [2879] [2880] [2881]) (./namespacemom__tracer__z__init.tex [2882] [2883] Underfull \vbox (badness 10000) has occurred while \output is active [] [2884] Underfull \hbox (badness 10000) detected at line 202 [][][] [] [2885] [2886] [2887] [2888] [2889] Underfull \hbox (badness 10000) detected at line 505 [][][] [] [2890] Underfull \vbox (badness 10000) has occurred while \output is active [] [2891] Underfull \vbox (badness 10000) has occurred while \output is active [] [2892] [2893] [2894]) (./namespacemom__transcribe__grid.tex [2895] [2896] Underfull \vbox (badness 10000) has occurred while \output is active [] [2897] [2898] Underfull \vbox (badness 10000) has occurred while \output is active [] [2899] [2900]) (./namespacemom__transform__fms.tex [2901] [2902]) (./namespacemom__unit__scaling.tex [2903] [2904] [2905]) (./namespacemom__unit__tests.tex [2906]) (./namespacemom__variables.tex [2907] [2908] [2909] [2910] [2911] [2912]) (./namespacemom__vert__friction.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [] Underfull \hbox (badness 10000) detected at line 11 [][][] [] [2913] [2914] [2915] Underfull \vbox (badness 10000) has occurred while \output is active [] [2916] Underfull \vbox (badness 10000) has occurred while \output is active [] [2917] Underfull \vbox (badness 10000) has occurred while \output is active [] [2918] [2919] [2920] [2921] Underfull \vbox (badness 10000) has occurred while \output is active [] [2922] Underfull \vbox (badness 10000) has occurred while \output is active [] [2923] Underfull \vbox (badness 10000) has occurred while \output is active [] [2924] [2925] [2926] Underfull \vbox (badness 10000) has occurred while \output is active [] [2927] Underfull \vbox (badness 10000) has occurred while \output is active [] [2928] Underfull \vbox (badness 10000) has occurred while \output is active [] [2929] Underfull \vbox (badness 10000) has occurred while \output is active [] [2930] Underfull \vbox (badness 10000) has occurred while \output is active [] [2931] [2932] [2933] Underfull \vbox (badness 10000) has occurred while \output is active [] [2934] Underfull \vbox (badness 10000) has occurred while \output is active [] [2935] [2936] [2937] Underfull \vbox (badness 10000) has occurred while \output is active [] [2938] Underfull \vbox (badness 10000) has occurred while \output is active [] [2939] Underfull \hbox (badness 10000) in paragraph at lines 1952--1953 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, gv %ke) , intent(inout) \T1/pcr/m/sl/8 visc[]_[] [] [2940] Underfull \vbox (badness 10000) has occurred while \output is active [] [2941]) (./namespacemom__verticalgrid.tex [2942] Underfull \hbox (badness 10000) detected at line 66 [][][] [] Underfull \hbox (badness 10000) detected at line 102 [][][] [] [2943] Underfull \hbox (badness 10000) detected at line 138 [][][] [] [2944] [2945] [2946] [2947]) (./namespacemom__wave__interface.tex Underfull \hbox (badness 10000) detected at line 8 [][][] [] [2948] [2949] [2950] Underfull \vbox (badness 10000) has occurred while \output is active [] [2951] Underfull \vbox (badness 10000) has occurred while \output is active [] [2952] [2953] [2954] [2955] [2956] [2957] [2958] [2959] [2960] Underfull \vbox (badness 10000) has occurred while \output is active [] [2961] Underfull \vbox (badness 10000) has occurred while \output is active [] [2962] [2963] [2964] [2965] Underfull \vbox (badness 10000) has occurred while \output is active [] [2966] [2967] Underfull \vbox (badness 10000) has occurred while \output is active [] [2968] Underfull \vbox (badness 10000) has occurred while \output is active [] [2969] [2970] [2971] [2972] [2973] [2974] [2975] [2976] [2977] [2978] [2979] [2980] [2981]) (./namespacemom__wave__speed.tex [2982] Underfull \vbox (badness 10000) has occurred while \output is active [] [2983] [2984] Underfull \hbox (badness 10000) in paragraph at lines 183--184 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsd[]: g %jed, g %ke), i ntent(out), optional [] [2985] [2986] Underfull \vbox (badness 10000) has occurred while \output is active [] [2987] Underfull \vbox (badness 10000) has occurred while \output is active [] [2988] Underfull \vbox (badness 10000) has occurred while \output is active [] [2989] Underfull \vbox (badness 10000) has occurred while \output is active [] [2990] Underfull \vbox (badness 10000) has occurred while \output is active [] [2991] Underfull \vbox (badness 10000) has occurred while \output is active [] [2992] Overfull \vbox (20.3618pt too high) has occurred while \output is active [] [2993] [2994] [2995] [2996] Underfull \vbox (badness 10000) has occurred while \output is active [] [2997] Underfull \vbox (badness 10000) has occurred while \output is active [] [2998] Underfull \vbox (badness 10000) has occurred while \output is active [] [2999] Underfull \vbox (badness 10000) has occurred while \output is active [] [3000] Underfull \vbox (badness 10000) has occurred while \output is active [] [3001]) (./namespacemom__wave__structure.tex [3002] [3003] Underfull \vbox (badness 10000) has occurred while \output is active [] [3004] [3005] [3006] Underfull \vbox (badness 10000) has occurred while \output is active [] [3007] Underfull \vbox (badness 10000) has occurred while \output is active [] [3008] Underfull \vbox (badness 10000) has occurred while \output is active [] [3009] Underfull \vbox (badness 10000) has occurred while \output is active [] [3010] Underfull \vbox (badness 10000) has occurred while \output is active [] [3011] [3012]) (./namespacemom__write__cputime.tex [3013] [3014] [3015] [3016]) (./namespaceneverworld__initialization.tex [3017] [3018] [3019] Overfull \vbox (66.35884pt too high) has occurred while \output is active [] [3020] [3021] Overfull \vbox (59.03142pt too high) has occurred while \output is active [] [3022] [3023] Overfull \vbox (35.34378pt too high) has occurred while \output is active [] [3024] [3025] Underfull \vbox (badness 10000) has occurred while \output is active [] [3026] [3027]) (./namespaceocean__da__core__mod.tex Overfull \vbox (24.63379pt too high) has occurred while \output is active [] [3028]) (./namespaceocean__da__types__mod.tex [3029]) (./namespaceocean__model__mod.tex [3030] [3031] [3032] [3033] [3034] [3035] [3036] [3037] [3038] [3039] [3040] Underfull \vbox (badness 10000) has occurred while \output is active [] [3041] [3042] [3043] [3044] [3045] [3046] [3047] Underfull \vbox (badness 10000) has occurred while \output is active [] [3048] Underfull \vbox (badness 10000) has occurred while \output is active [] [3049]) (./namespaceoil__tracer.tex [3050] [3051] [3052] [3053] Underfull \hbox (badness 10000) detected at line 201 [][][] [] [3054] [3055] Underfull \vbox (badness 10000) has occurred while \output is active [] [3056] [3057] Overfull \vbox (55.07356pt too high) has occurred while \output is active [] [3058] [3059]) (./namespacep1m__functions.tex [3060] [3061] [3062] [3063]) (./namespacep3m__functions.tex [3064] Overfull \vbox (44.4672pt too high) has occurred while \output is active [] [3065] [3066] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] [] Overfull \hbox (0.98067pt too wide) in paragraph at lines 185--185 []\T1/phv/m/sl/10 sigma[] [] [3067] Underfull \vbox (badness 10000) has occurred while \output is active [] [3068] [3069] [3070] Underfull \vbox (badness 10000) has occurred while \output is active [] [3071] [3072] Overfull \vbox (8.10031pt too high) has occurred while \output is active [] [3073] [3074]) (./namespacePCM__functions.tex) (./namespacepcm__functions.tex [3075]) (./namespacephillips__initialization.tex [3076] [3077] [3078] [3079] [3080] [3081] [3082] Underfull \hbox (badness 10000) detected at line 454 [][][] [] ) (./namespaceplm__functions.tex [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090]) (./namespacepolynomial__functions.tex [3091] [3092] [3093]) (./namespaceppm__functions.tex [3094] [3095] Underfull \vbox (badness 10000) has occurred while \output is active [] [3096] [3097] [3098] [3099] Underfull \hbox (badness 10000) detected at line 378 [][][] [] ) (./namespacepqm__functions.tex [3100] [3101] Underfull \vbox (badness 10000) has occurred while \output is active [] [3102] [3103] [3104] Underfull \vbox (badness 10000) has occurred while \output is active [] [3105] Underfull \vbox (badness 10000) has occurred while \output is active [] [3106] Underfull \vbox (badness 10000) has occurred while \output is active [] [3107] [3108] Underfull \vbox (badness 10000) has occurred while \output is active [] [3109] Underfull \vbox (badness 10000) has occurred while \output is active [] [3110] Underfull \vbox (badness 10000) has occurred while \output is active [] [3111] [3112]) (./namespacepseudo__salt__tracer.tex [3113] Overfull \vbox (50.21103pt too high) has occurred while \output is active [] [3114] [3115] Underfull \hbox (badness 10000) detected at line 157 [][][] [] [3116] [3117] [3118] [3119] [3120]) (./namespaceregional__dyes.tex [3121] Underfull \hbox (badness 10000) detected at line 60 [][][] [] [3122] [3123] [3124] [3125] [3126] [3127] [3128] Underfull \vbox (badness 10000) has occurred while \output is active [] [3129]) (./namespaceregrid__consts.tex [3130] Underfull \hbox (badness 10000) detected at line 102 [][][] [] [3131] Underfull \hbox (badness 10000) detected at line 143 [][][] [] [3132] Underfull \hbox (badness 10000) detected at line 182 [][][] [] [3133]) (./namespaceregrid__edge__values.tex [3134] [3135] [3136] [3137] [3138] [3139] Underfull \vbox (badness 10000) has occurred while \output is active [] [3140] [3141] Underfull \vbox (badness 10000) has occurred while \output is active [] [3142] Underfull \vbox (badness 10000) has occurred while \output is active [] [3143] [3144] [3145] [3146] Underfull \vbox (badness 10000) has occurred while \output is active [] [3147] Underfull \vbox (badness 10000) has occurred while \output is active [] [3148] [3149] Underfull \vbox (badness 10000) has occurred while \output is active [] [3150] Underfull \vbox (badness 10000) has occurred while \output is active [] [3151] [3152] Underfull \vbox (badness 10000) has occurred while \output is active [] [3153] [3154] Underfull \vbox (badness 10000) has occurred while \output is active [] [3155] [3156] [3157] [3158] [3159]) (./namespaceregrid__interp.tex [3160] [3161] [3162] [3163] Underfull \hbox (badness 10000) detected at line 197 [][][] [] [3164] Underfull \vbox (badness 10000) has occurred while \output is active [] [3165] [3166] [3167] [3168] Underfull \vbox (badness 10000) has occurred while \output is active [] [3169] Underfull \vbox (badness 10000) has occurred while \output is active [] [3170] [3171]) (./namespaceregrid__solvers.tex [3172] [3173] [3174] [3175] Underfull \vbox (badness 10000) has occurred while \output is active [] [3176] [3177]) (./namespacergc__tracer.tex [3178] [3179] Underfull \vbox (badness 10000) has occurred while \output is active [] [3180] [3181] [3182] [3183]) (./namespacerossby__front__2d__initialization.tex [3184] [3185] Underfull \vbox (badness 10000) has occurred while \output is active [] [3186] [3187] [3188] [3189] [3190]) (./namespacescm__cvmix__tests.tex [3191] [3192] [3193] [3194] [3195] [3196]) (./namespaceseamount__initialization.tex [3197] [3198] [3199] [3200] Overfull \vbox (27.34378pt too high) has occurred while \output is active [] [3201]) (./namespaceshelfwave__initialization.tex [3202] [3203] [3204] [3205]) (./namespacesloshing__initialization.tex [3206] [3207] [3208] [3209] [3210]) (./namespacesoliton__initialization.tex [3211] [3212]) (./namespacesupercritical__initialization.tex [3213] Underfull \hbox (badness 3590) in paragraph at lines 8--8 []\T1/phv/m/n/10 The mod-ule con-fig-ures the model for the "su-per-crit-i-cal" ex-per-i-ment. [][]\T1/pcr/m/n/10 https[]://marine.[]rutgers.[] [] [3214]) (./namespacetidal__bay__initialization.tex [3215] Underfull \vbox (badness 10000) has occurred while \output is active [] [3216] [3217]) (./namespacetidal__forcing.tex) (./namespaceuser__change__diffusivity.tex [3218] Underfull \hbox (badness 10000) detected at line 42 [][][] [] [3219] [3220] Underfull \vbox (badness 10000) has occurred while \output is active [] [3221] [3222] [3223] Underfull \hbox (badness 10000) detected at line 348 [][][] [] ) (./namespaceuser__initialization.tex [3224] [3225] Overfull \vbox (51.4922pt too high) has occurred while \output is active [] [3226] [3227] [3228] [3229] [3230] Underfull \vbox (badness 10000) has occurred while \output is active [] [3231] [3232]) (./namespaceuser__revise__forcing.tex [3233] [3234]) (./namespaceuser__shelf__init.tex [3235] [3236] [3237] [3238] [3239] [3240]) (./namespaceuser__surface__forcing.tex [3241] [3242] Underfull \vbox (badness 10000) has occurred while \output is active [] [3243] [3244] [3245]) (./namespaceuser__tracer__example.tex [3246] [3247] [3248] [3249] [3250] [3251] [3252] [3253] Underfull \hbox (badness 10000) detected at line 496 [][][] [] [3254]) (./namespacewrite__ocean__obs__mod.tex [3255] [3256]) [3257] [3258 ] Chapter 48. (./structmom__variables_1_1accel__diag__ptrs.tex File: structmom__variables_1_1accel__diag__ptrs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__variables_1_1accel__diag__ptrs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 208.0pt x 288.01622pt. [3259 <./structmom__variables_1_1accel__diag__ptrs__coll__graph.pdf>]) (./stru ctcoord__adapt_1_1adapt__cs.tex [3260] File: structcoord__adapt_1_1adapt__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structcoord__adapt_1_1adapt__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 339.0pt x 233.0131pt. [3261 <./structcoord__adapt_1_1adapt__cs__coll__graph.pdf>]) (./structadvection__test__tracer_1_1advection__test__tracer__cs.tex File: structadvection__test__tracer_1_1advection__test__tracer__cs__coll__graph .pdf Graphic file (type pdf) Package pdftex.def Info: structadvection__test__tracer_1_1advection__test__trac er__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 351.46986pt. [3262 <./structadvection__test__tracer_1_1advection__test__tracer__cs__coll__g raph.pdf>]) (./structmom__ale_1_1ale__cs.tex [3263] File: structmom__ale_1_1ale__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__ale_1_1ale__cs__coll__graph.pdf used on in put line 17. (pdftex.def) Requested size: 350.0pt x 134.16946pt. [3264 <./structmom__ale_1_1ale__cs__coll__graph.pdf>]) (./structmom__ale__spon ge_1_1ale__sponge__cs.tex File: structmom__ale__sponge_1_1ale__sponge__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__ale__sponge_1_1ale__sponge__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 179.45877pt. [3265] [3266 <./structmom__ale__sponge_1_1ale__sponge__cs__coll__graph.pdf>] [3267]) (./interfacemom__forcing__type_1_1allocate__forcing__type.tex [3268] [3269] [3270]) (./interfacemom__forcing__type_1_1allocate__mech__forcing.tex [3271] [3272]) (./interfacemom__array__transform_1_1allocate__rotated__array.tex [3273] Overfull \vbox (25.74976pt too high) has occurred while \output is active [] [3274] [3275] Overfull \vbox (6.44917pt too high) has occurred while \output is active [] [3276]) (./interfacemom__hor__index_1_1assignment_07_0A_08.tex [3277]) (./interfacemom__coms_1_1assignment_07_0A_08.tex [3278]) (./structmom__tidal__forcing_1_1astro__longitudes.tex File: structmom__tidal__forcing_1_1astro__longitudes__coll__graph.pdf Graphic f ile (type pdf) Package pdftex.def Info: structmom__tidal__forcing_1_1astro__longitudes__coll__ graph.pdf used on input line 17. (pdftex.def) Requested size: 194.0pt x 211.00865pt. [3279]) (./structmom__diag__mediator_1_1axes__grp.tex File: structmom__diag__mediator_1_1axes__grp__coll__graph.pdf Graphic file (typ e pdf) Package pdftex.def Info: structmom__diag__mediator_1_1axes__grp__coll__graph.pd f used on input line 17. (pdftex.def) Requested size: 350.0pt x 403.6947pt. [3280 <./structmom__tidal__forcing_1_1astro__longitudes__coll__graph.pdf>] [32 81 <./structmom__diag__mediator_1_1axes__grp__coll__graph.pdf>] [3282]) (./structmom__barotropic_1_1barotropic__cs.tex File: structmom__barotropic_1_1barotropic__cs__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__barotropic_1_1barotropic__cs__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 350.0pt x 487.60199pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [3283] [3284 <./structmom__barotropic_1_1barotropic__cs__coll__graph.pdf>] [3285] [3286] [3287] [3288] [3289] [3290]) (./interfacemom__checksums_1_1bchksum.tex [3291] [3292] Underfull \vbox (badness 10000) has occurred while \output is active [] [3293] [3294] [3295] Underfull \vbox (badness 10000) has occurred while \output is active [] [3296]) (./interfacemom__checksums_1_1bchksum__pair.tex [3297] [3298] [3299]) (./structbfb__surface__forcing_1_1bfb__surface__forcing__cs.tex [3300] File: structbfb__surface__forcing_1_1bfb__surface__forcing__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structbfb__surface__forcing_1_1bfb__surface__forcing__ cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 325.0pt x 266.02312pt. [3301 <./structbfb__surface__forcing_1_1bfb__surface__forcing__cs__coll__graph .pdf>]) (./structmom__bkgnd__mixing_1_1bkgnd__mixing__cs.tex File: structmom__bkgnd__mixing_1_1bkgnd__mixing__cs__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structmom__bkgnd__mixing_1_1bkgnd__mixing__cs__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 182.9374pt. [3302 <./structmom__bkgnd__mixing_1_1bkgnd__mixing__cs__coll__graph.pdf>] [330 3]) (./structboundary__impulse__tracer_1_1boundary__impulse__tracer__cs.tex [3304] File: structboundary__impulse__tracer_1_1boundary__impulse__tracer__cs__coll__g raph.pdf Graphic file (type pdf) Package pdftex.def Info: structboundary__impulse__tracer_1_1boundary__impulse__ tracer__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 301.92195pt. [3305 <./structboundary__impulse__tracer_1_1boundary__impulse__tracer__cs__col l__graph.pdf>]) (./structmom__variables_1_1bt__cont__type.tex File: structmom__variables_1_1bt__cont__type__coll__graph.pdf Graphic file (typ e pdf) Package pdftex.def Info: structmom__variables_1_1bt__cont__type__coll__graph.pd f used on input line 17. (pdftex.def) Requested size: 281.0pt x 277.01985pt. [3306] [3307 <./structmom__variables_1_1bt__cont__type__coll__graph.pdf>]) (./structmom__barotropic_1_1bt__obc__type.tex File: structmom__barotropic_1_1bt__obc__type__coll__graph.pdf Graphic file (typ e pdf) Package pdftex.def Info: structmom__barotropic_1_1bt__obc__type__coll__graph.pd f used on input line 17. (pdftex.def) Requested size: 350.0pt x 234.42699pt. [3308] [3309 <./structmom__barotropic_1_1bt__obc__type__coll__graph.pdf>]) (./structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs.tex File: structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs__coll__graph.pdf Grap hic file (type pdf) Package pdftex.def Info: structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs__c oll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 147.02031pt. [3310] [3311 <./structmom__bulk__mixed__layer_1_1bulkmixedlayer__cs__coll__gra ph.pdf>] [3312] [3313]) (./interfacemom__eos_1_1calculate__compress.tex [3314] Underfull \vbox (badness 10000) has occurred while \output is active [] [3315] [3316]) (./interfacemom__eos_1_1calculate__density.tex [3317] Overfull \vbox (80.42377pt too high) has occurred while \output is active [] [3318] [3319] [3320] [3321] [3322] [3323] [3324] [3325] [3326]) (./interfacemom__eos_1_1calculate__density__derivs.tex [3327] [3328] [3329] Overfull \vbox (39.68802pt too high) has occurred while \output is active [] [3330]) (./interfacemom__eos__linear_1_1calculate__density__derivs__linear.tex [3331] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]linear [] [3332] Underfull \hbox (badness 10000) in paragraph at lines 94--95 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]de rivs[]_[]linear[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]linear [] [3333]) (./interfacemom__eos__nemo_1_1calculate__density__derivs__nemo.tex [3334] [3335]) (./interfacemom__eos__teos10_1_1calculate__density__derivs__teos10.tex [3336] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]teos10 [] [3337] Underfull \hbox (badness 10000) in paragraph at lines 92--93 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]de rivs[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]teos10 [] [3338]) (./interfacemom__eos__wright_1_1calculate__density__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]array[]_[]wright [] [3339] [3340] Underfull \hbox (badness 10000) in paragraph at lines 95--96 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]de rivs[]_[]wright[]::calculate[]_[]density[]_[]derivs[]_[]scalar[]_[]wright [] [3341]) (./interfacemom__eos__linear_1_1calculate__density__linear.tex [3342] [3343]) (./interfacemom__eos__nemo_1_1calculate__density__nemo.tex [3344] [3345] Overfull \vbox (10.06525pt too high) has occurred while \output is active [] [3346]) (./interfacemom__eos_1_1calculate__density__second__derivs.tex [3347] [3348] [3349] [3350]) (./interfacemom__eos__linear_1_1calculate__density__second__derivs__linear.tex [3351] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] [] [3352] Underfull \hbox (badness 10000) in paragraph at lines 96--97 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]linear[]::calculate[]_[]density[]_[]second[]_[] [] [3353]) (./interfacemom__eos__teos10_1_1calculate__density__second__derivs__teos10.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [] [3354] [3355] Underfull \hbox (badness 10000) in paragraph at lines 101--102 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[] [] [3356]) (./interfacemom__eos__wright_1_1calculate__density__second__derivs__wright.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [] [3357] [3358] Underfull \hbox (badness 10000) in paragraph at lines 120--121 \T1/pcr/m/n/8 subroutine mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]se cond[]_[]derivs[]_[]wright[]::calculate[]_[]density[]_[]second[]_[] [] [3359]) (./interfacemom__eos__teos10_1_1calculate__density__teos10.tex [3360] [3361]) (./interfacemom__eos__unesco_1_1calculate__density__unesco.tex [3362] [3363] Overfull \vbox (42.16423pt too high) has occurred while \output is active [] [3364]) (./interfacemom__eos__wright_1_1calculate__density__wright.tex [3365] [3366]) (./interfacemom__eos_1_1calculate__spec__vol.tex [3367] [3368] [3369] [3370] [3371]) (./interfacemom__eos__linear_1_1calculate__spec__vol__linear.tex [3372] [3373]) (./interfacemom__eos__teos10_1_1calculate__spec__vol__teos10.tex [3374] [3375] [3376]) (./interfacemom__eos__unesco_1_1calculate__spec__vol__unesco.tex [3377] [3378] Underfull \vbox (badness 10000) has occurred while \output is active [] [3379]) (./interfacemom__eos__wright_1_1calculate__spec__vol__wright.tex [3380] [3381]) (./interfacemom__eos_1_1calculate__specific__vol__derivs.tex [3382] Underfull \vbox (badness 10000) has occurred while \output is active [] [3383] [3384]) (./interfacemom__eos_1_1calculate__tfreeze.tex [3385] Overfull \vbox (50.59338pt too high) has occurred while \output is active [] [3386] Overfull \vbox (45.06868pt too high) has occurred while \output is active [] [3387]) (./interfacemom__tfreeze_1_1calculate__tfreeze__linear.tex [3388] [3389]) (./interfacemom__tfreeze_1_1calculate__tfreeze__millero.tex [3390] [3391] [3392]) (./interfacemom__tfreeze_1_1calculate__tfreeze__teos10.tex [3393] [3394]) (./interfacemom__debugging_1_1check__redundant.tex [3395] [3396] [3397] [3398]) (./interfacemom__debugging_1_1check__redundant__b.tex [3399] [3400] [3401] [3402] [3403]) (./interfacemom__debugging_1_1check__redundant__c.tex [3404] Overfull \vbox (103.58171pt too high) has occurred while \output is active [] [3405] [3406]) (./interfacemom__debugging_1_1check__redundant__t.tex [3407] [3408] [3409] [3410] [3411] [3412]) (./interfacemom__checksums_1_1chk__sum__msg.tex [3413] [3414] [3415]) (./interfacemom__checksums_1_1chksum.tex [3416] [3417] [3418]) (./interfacemom__domains_1_1clone__mom__domain.tex [3419] [3420] [3421] [3422] Underfull \vbox (badness 10000) has occurred while \output is active [] [3423]) (./structmom__variables_1_1cont__diag__ptrs.tex File: structmom__variables_1_1cont__diag__ptrs__coll__graph.pdf Graphic file (t ype pdf) Package pdftex.def Info: structmom__variables_1_1cont__diag__ptrs__coll__graph. pdf used on input line 17. (pdftex.def) Requested size: 199.0pt x 222.01251pt. Underfull \vbox (badness 1902) has occurred while \output is active [] [3424]) (./structmom__continuity_1_1continuity__cs.tex File: structmom__continuity_1_1continuity__cs__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__continuity_1_1continuity__cs__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 322.0pt x 178.01003pt. [3425 <./structmom__variables_1_1cont__diag__ptrs__coll__graph.pdf>] [3426 <./ structmom__continuity_1_1continuity__cs__coll__graph.pdf>]) (./structmom__continuity__ppm_1_1continuity__ppm__cs.tex File: structmom__continuity__ppm_1_1continuity__ppm__cs__coll__graph.pdf Graphi c file (type pdf) Package pdftex.def Info: structmom__continuity__ppm_1_1continuity__ppm__cs__col l__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 250.71432pt. [3427 <./structmom__continuity__ppm_1_1continuity__ppm__cs__coll__graph.pdf>]) (./interfaceregrid__consts_1_1coordinateunits.tex [3428] Underfull \hbox (badness 10000) detected at line 37 [][][] [] [3429] Underfull \hbox (badness 10000) detected at line 76 [][][] [] ) (./structmom__coriolisadv_1_1coriolisadv__cs.tex File: structmom__coriolisadv_1_1coriolisadv__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__coriolisadv_1_1coriolisadv__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 187.1632pt. [3430] [3431 <./structmom__coriolisadv_1_1coriolisadv__cs__coll__graph.pdf>] [ 3432]) (./interfacemom__domains_1_1create__group__pass.tex [3433] [3434] [3435] [3436] [3437] [3438] [3439]) (./structmom__controlled__forcing_1_1ctrl__forcing__cs.tex File: structmom__controlled__forcing_1_1ctrl__forcing__cs__coll__graph.pdf Grap hic file (type pdf) Package pdftex.def Info: structmom__controlled__forcing_1_1ctrl__forcing__cs__c oll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 240.00249pt. [3440 <./structmom__controlled__forcing_1_1ctrl__forcing__cs__coll__graph.pdf> ] [3441] [3442] [3443]) (./structmom__cvmix__conv_1_1cvmix__conv__cs.tex File: structmom__cvmix__conv_1_1cvmix__conv__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__cvmix__conv_1_1cvmix__conv__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 188.88788pt. [3444 <./structmom__cvmix__conv_1_1cvmix__conv__cs__coll__graph.pdf>]) (./structmom__cvmix__ddiff_1_1cvmix__ddiff__cs.tex File: structmom__cvmix__ddiff_1_1cvmix__ddiff__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__cvmix__ddiff_1_1cvmix__ddiff__cs__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 234.51851pt. [3445] [3446 <./structmom__cvmix__ddiff_1_1cvmix__ddiff__cs__coll__graph.pdf>] ) (./structmom__cvmix__shear_1_1cvmix__shear__cs.tex File: structmom__cvmix__shear_1_1cvmix__shear__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__cvmix__shear_1_1cvmix__shear__cs__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 160.53073pt. [3447 <./structmom__cvmix__shear_1_1cvmix__shear__cs__coll__graph.pdf>]) (./structmom__sum__output_1_1depth__list.tex [3448] File: structmom__sum__output_1_1depth__list__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__sum__output_1_1depth__list__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 239.0pt x 189.00197pt. [3449 <./structmom__sum__output_1_1depth__list__coll__graph.pdf>]) (./structmom__diabatic__aux_1_1diabatic__aux__cs.tex File: structmom__diabatic__aux_1_1diabatic__aux__cs__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structmom__diabatic__aux_1_1diabatic__aux__cs__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 188.2256pt. [3450 <./structmom__diabatic__aux_1_1diabatic__aux__cs__coll__graph.pdf>]) (./structmom__diabatic__driver_1_1diabatic__cs.tex [3451] File: structmom__diabatic__driver_1_1diabatic__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__diabatic__driver_1_1diabatic__cs__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 184.41333pt x 550.0pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [3452] [3453 <./structmom__diabatic__driver_1_1diabatic__cs__coll__graph.pdf>] [3454] [3455] [3456] [3457] [3458]) (./structmom__diag__mediator_1_1diag__ctrl.tex File: structmom__diag__mediator_1_1diag__ctrl__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__diag__mediator_1_1diag__ctrl__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 350.0pt x 300.4298pt. [3459] [3460 <./structmom__diag__mediator_1_1diag__ctrl__coll__graph.pdf>] [34 61] [3462] [3463]) (./structmom__diag__mediator_1_1diag__dsamp.tex File: structmom__diag__mediator_1_1diag__dsamp__coll__graph.pdf Graphic file (t ype pdf) Package pdftex.def Info: structmom__diag__mediator_1_1diag__dsamp__coll__graph. pdf used on input line 17. (pdftex.def) Requested size: 204.0pt x 189.01065pt. ) (./structmom__diag__mediator_1_1diag__grid__storage.tex [3464 <./structmom__dia g__mediator_1_1diag__dsamp__coll__graph.pdf>] File: structmom__diag__mediator_1_1diag__grid__storage__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__diag__mediator_1_1diag__grid__storage__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 247.52177pt. [3465 <./structmom__diag__mediator_1_1diag__grid__storage__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__grids__type.tex File: structmom__diag__mediator_1_1diag__grids__type__coll__graph.pdf Graphic f ile (type pdf) Package pdftex.def Info: structmom__diag__mediator_1_1diag__grids__type__coll__ graph.pdf used on input line 17. (pdftex.def) Requested size: 204.0pt x 178.01003pt. ) (./structmom__diag__remap_1_1diag__remap__ctrl.tex [3466 <./structmom__diag__me diator_1_1diag__grids__type__coll__graph.pdf>] File: structmom__diag__remap_1_1diag__remap__ctrl__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__diag__remap_1_1diag__remap__ctrl__coll__gra ph.pdf used on input line 19. (pdftex.def) Requested size: 350.0pt x 322.16362pt. [3467 <./structmom__diag__remap_1_1diag__remap__ctrl__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diag__type.tex File: structmom__diag__mediator_1_1diag__type__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__diag__mediator_1_1diag__type__coll__graph.p df used on input line 19. (pdftex.def) Requested size: 350.0pt x 295.7845pt. [3468] [3469 <./structmom__diag__mediator_1_1diag__type__coll__graph.pdf>]) (./structmom__diag__mediator_1_1diagcs__dsamp.tex File: structmom__diag__mediator_1_1diagcs__dsamp__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__diag__mediator_1_1diagcs__dsamp__coll__grap h.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 305.9475pt. [3470] [3471 <./structmom__diag__mediator_1_1diagcs__dsamp__coll__graph.pdf>] [3472]) (./structmom__diagnostics_1_1diagnostics__cs.tex [3473] File: structmom__diagnostics_1_1diagnostics__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__diagnostics_1_1diagnostics__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 154.12915pt. [3474 <./structmom__diagnostics_1_1diagnostics__cs__coll__graph.pdf>] [3475] [ 3476] [3477]) (./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs.tex File: structmom__diapyc__energy__req_1_1diapyc__energy__req__cs__coll__graph.pd f Graphic file (type pdf) Package pdftex.def Info: structmom__diapyc__energy__req_1_1diapyc__energy__req_ _cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 237.19269pt. [3478] [3479 <./structmom__diapyc__energy__req_1_1diapyc__energy__req__cs__coll__graph .pdf>]) (./structmom__set__diffusivity_1_1diffusivity__diags.tex [3480] File: structmom__set__diffusivity_1_1diffusivity__diags__coll__graph.pdf Graphi c file (type pdf) Package pdftex.def Info: structmom__set__diffusivity_1_1diffusivity__diags__col l__graph.pdf used on input line 17. (pdftex.def) Requested size: 196.0pt x 287.99858pt. [3481 <./structmom__set__diffusivity_1_1diffusivity__diags__coll__graph.pdf>]) (./structmom__get__input_1_1directories.tex File: structmom__get__input_1_1directories__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__get__input_1_1directories__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 338.0pt x 189.00775pt. [3482 <./structmom__get__input_1_1directories__coll__graph.pdf>]) (./interface mom__document_1_1doc__param.tex [3483] [3484] Underfull \vbox (badness 10000) has occurred while \output is active [] [3485] [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493]) (./structmom__document_1_1doc__type.tex File: structmom__document_1_1doc__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__document_1_1doc__type__coll__graph.pdf use d on input line 17. (pdftex.def) Requested size: 350.0pt x 146.44519pt. [3494 <./structmom__document_1_1doc__type__coll__graph.pdf>]) (./structdome__t racer_1_1dome__tracer__cs.tex File: structdome__tracer_1_1dome__tracer__cs__coll__graph.pdf Graphic file (typ e pdf) Package pdftex.def Info: structdome__tracer_1_1dome__tracer__cs__coll__graph.pd f used on input line 17. (pdftex.def) Requested size: 350.0pt x 277.02586pt. [3495] [3496 <./structdome__tracer_1_1dome__tracer__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1downsample__diag__field.tex [3497] [3498] [3499]) (./interfacemom__diag__mediator_1_1downsample__field.tex [3500] Underfull \vbox (badness 10000) has occurred while \output is active [] [3501] [3502] [3503]pdfTeX warning (ext4): destination with the same identifier (name{ namespacemom__diag__mediator_downsampling}) has been already used, duplicate ig nored \relax l.229 ...espacemom__diag__mediator_downsampling}{} \subsection{The down sampl... [3504] Overfull \hbox (36.1684pt too wide) in paragraph at lines 318--318 [] \T1/pcr/m/n/7 allocate(field_out(diag_cs%dsamp(dl)%isd:diag_cs%dsamp(d l)%ied,diag_cs%dsamp(dl)%jsd:diag_cs%dsamp(dl)%jed,ks:ke))[][] [] [3505] Underfull \vbox (badness 10000) has occurred while \output is active [] [3506]) (./interfacemom__diag__mediator_1_1downsample__mask.tex [3507] [3508] [3509]) (./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs.tex File: structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs__coll_ _graph.pdf Graphic file (type pdf) Package pdftex.def Info: structdumbbell__surface__forcing_1_1dumbbell__surface_ _forcing__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 343.0pt x 244.00252pt. Underfull \vbox (badness 3590) has occurred while \output is active [] [3510] [3511 <./structdumbbell__surface__forcing_1_1dumbbell__surface__forcing__cs__co ll__graph.pdf>]) (./structregional__dyes_1_1dye__tracer__cs.tex File: structregional__dyes_1_1dye__tracer__cs__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structregional__dyes_1_1dye__tracer__cs__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 350.0pt x 314.3204pt. [3512 <./structregional__dyes_1_1dye__tracer__cs__coll__graph.pdf>]) (./structdyed__channel__initialization_1_1dyed__channel__obc__cs.tex File: structdyed__channel__initialization_1_1dyed__channel__obc__cs__coll__grap h.pdf Graphic file (type pdf) Package pdftex.def Info: structdyed__channel__initialization_1_1dyed__channel__ obc__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 230.0pt x 200.00208pt. [3513]) (./structdyed__obc__tracer_1_1dyed__obc__tracer__cs.tex File: structdyed__obc__tracer_1_1dyed__obc__tracer__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structdyed__obc__tracer_1_1dyed__obc__tracer__cs__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 328.19153pt. [3514 <./structdyed__channel__initialization_1_1dyed__channel__obc__cs__coll__ graph.pdf>] [3515 <./structdyed__obc__tracer_1_1dyed__obc__tracer__cs__coll__gr aph.pdf>]) (./structmom__dyn__horgrid_1_1dyn__horgrid__type.tex File: structmom__dyn__horgrid_1_1dyn__horgrid__type__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structmom__dyn__horgrid_1_1dyn__horgrid__type__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 153.22467pt. [3516 <./structmom__dyn__horgrid_1_1dyn__horgrid__type__coll__graph.pdf>] [351 7] [3518] [3519] [3520]) (./interfacemom__coms_1_1efp__sum__across__pes.tex [3521] [3522] [3523]) (./structmom__coms_1_1efp__type.tex File: structmom__coms_1_1efp__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__coms_1_1efp__type__coll__graph.pdf used on input line 19. (pdftex.def) Requested size: 247.0pt x 167.00172pt. ) (./structmom__energetic__pbl_1_1energetic__pbl__cs.tex [3524 <./structmom__coms _1_1efp__type__coll__graph.pdf>] File: structmom__energetic__pbl_1_1energetic__pbl__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__energetic__pbl_1_1energetic__pbl__cs__coll_ _graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 138.2716pt. [3525 <./structmom__energetic__pbl_1_1energetic__pbl__cs__coll__graph.pdf>] [3 526] [3527] [3528]) (./structmom__entrain__diffusive_1_1entrain__diffusive__cs.tex File: structmom__entrain__diffusive_1_1entrain__diffusive__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__entrain__diffusive_1_1entrain__diffusive__c s__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 171.14677pt. [3529 <./structmom__entrain__diffusive_1_1entrain__diffusive__cs__coll__graph. pdf>]) (./structmom__eos_1_1eos__type.tex File: structmom__eos_1_1eos__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__eos_1_1eos__type__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 261.33101pt. [3530] [3531 <./structmom__eos_1_1eos__type__coll__graph.pdf>]) (./structmom__ energetic__pbl_1_1epbl__column__diags.tex File: structmom__energetic__pbl_1_1epbl__column__diags__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__energetic__pbl_1_1epbl__column__diags__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 228.0pt x 288.01181pt. [3532 <./structmom__energetic__pbl_1_1epbl__column__diags__coll__graph.pdf>]) (./structmom__restart_1_1field__restart.tex File: structmom__restart_1_1field__restart__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__restart_1_1field__restart__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 330.0pt x 189.00775pt. [3533]) (./structmom__file__parser_1_1file__data__type.tex [3534 <./structmom__restart_ 1_1field__restart__coll__graph.pdf>] File: structmom__file__parser_1_1file__data__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__file__parser_1_1file__data__type__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 347.0pt x 200.0082pt. ) (./interfacemom__io_1_1file__exists.tex [3535 <./structmom__file__parser_1_1file__data__type__coll__graph.pdf>] [3536]) (./structmom__open__boundary_1_1file__obc__cs.tex File: structmom__open__boundary_1_1file__obc__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__open__boundary_1_1file__obc__cs__coll__grap h.pdf used on input line 17. (pdftex.def) Requested size: 208.0pt x 178.01003pt. [3537]) (./interfacemom__horizontal__regridding_1_1fill__boundaries.tex [3538 <./struct mom__open__boundary_1_1file__obc__cs__coll__graph.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 71--72 \T1/pcr/m/n/8 real function, dimension(0[]:size(m,1)+1,0[]:size(m,2)+1) mom[]_[ ]horizontal[]_[]regridding[]::fill[]_[]boundaries[] [] [3539]) (./interfacemom__domains_1_1fill__symmetric__edges.tex [3540] [3541] Underfull \vbox (badness 10000) has occurred while \output is active [] [3542]) (./interfacemom__interface__heights_1_1find__eta.tex [3543] [3544] [3545] [3546]) (./structmom__forcing__type_1_1forcing.tex [3547] File: structmom__forcing__type_1_1forcing__coll__graph.pdf Graphic file (type p df) Package pdftex.def Info: structmom__forcing__type_1_1forcing__coll__graph.pdf used on input line 19. (pdftex.def) Requested size: 350.0pt x 198.67316pt. [3548 <./structmom__forcing__type_1_1forcing__coll__graph.pdf>] [3549] [3550]) (./structmom__forcing__type_1_1forcing__diags.tex File: structmom__forcing__type_1_1forcing__diags__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__forcing__type_1_1forcing__diags__coll__grap h.pdf used on input line 17. (pdftex.def) Requested size: 260.0pt x 332.00345pt. [3551] [3552 <./structmom__forcing__type_1_1forcing__diags__coll__graph.pdf>] [3553] [3554] [3555] [3556]) (./structocean__da__types__mod_1_1forward__operator__type.tex File: structocean__da__types__mod_1_1forward__operator__type__coll__graph.pdf G raphic file (type pdf) Package pdftex.def Info: structocean__da__types__mod_1_1forward__operator__type __coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 249.0pt x 222.00911pt. [3557]) (./structg__tracer__utils_1_1g__diag__type.tex [3558 <./structocean__da__types_ _mod_1_1forward__operator__type__coll__graph.pdf>] File: structg__tracer__utils_1_1g__diag__type__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structg__tracer__utils_1_1g__diag__type__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 228.0pt x 167.00684pt. ) (./structg__tracer__utils_1_1g__tracer__common.tex File: structg__tracer__utils_1_1g__tracer__common__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structg__tracer__utils_1_1g__tracer__common__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 208.0pt x 189.01065pt. [3559 <./structg__tracer__utils_1_1g__diag__type__coll__graph.pdf>] [3560 <./s tructg__tracer__utils_1_1g__tracer__common__coll__graph.pdf>]) (./interfaceg__tracer__utils_1_1g__tracer__get__pointer.tex [3561] [3562] [3563]) (./interfaceg__tracer__utils_1_1g__tracer__get__values.tex [3564] [3565] Overfull \vbox (58.06468pt too high) has occurred while \output is active [] [3566] [3567]) (./interfaceg__tracer__utils_1_1g__tracer__set__values.tex [3568] [3569] [3570]) (./structg__tracer__utils_1_1g__tracer__type.tex File: structg__tracer__utils_1_1g__tracer__type__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structg__tracer__utils_1_1g__tracer__type__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 127.27878pt. [3571 <./structg__tracer__utils_1_1g__tracer__type__coll__graph.pdf>]) (./structmom__geothermal_1_1geothermal__cs.tex File: structmom__geothermal_1_1geothermal__cs__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__geothermal_1_1geothermal__cs__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 350.0pt x 141.53445pt. [3572]) (./interfacemom__file__parser_1_1get__param.tex [3573 <./structmom__geothermal_ 1_1geothermal__cs__coll__graph.pdf>] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584] [3585] [3586]) (./structmom__grid__initialize_1_1gps.tex File: structmom__grid__initialize_1_1gps__coll__graph.pdf Graphic file (type pd f) Package pdftex.def Info: structmom__grid__initialize_1_1gps__coll__graph.pdf u sed on input line 17. (pdftex.def) Requested size: 350.0pt x 236.56944pt. [3587 <./structmom__grid__initialize_1_1gps__coll__graph.pdf>]) (./structocean __da__types__mod_1_1grid__type.tex File: structocean__da__types__mod_1_1grid__type__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structocean__da__types__mod_1_1grid__type__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 286.0pt x 244.00626pt. [3588] [3589 <./structocean__da__types__mod_1_1grid__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1hchksum.tex [3590] [3591] Underfull \vbox (badness 10000) has occurred while \output is active [] [3592] [3593] Underfull \vbox (badness 10000) has occurred while \output is active [] [3594]) (./interfacemom__checksums_1_1hchksum__pair.tex [3595] [3596] [3597]) (./structmom__hor__index_1_1hor__index__type.tex [3598] File: structmom__hor__index_1_1hor__index__type__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__hor__index_1_1hor__index__type__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 231.0pt x 288.0074pt. [3599 <./structmom__hor__index_1_1hor__index__type__coll__graph.pdf>] [3600]) (./structmom__hor__visc_1_1hor__visc__cs.tex File: structmom__hor__visc_1_1hor__visc__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__hor__visc_1_1hor__visc__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 207.1582pt. [3601 <./structmom__hor__visc_1_1hor__visc__cs__coll__graph.pdf>] [3602] [3603 ] [3604] [3605]) (./interfacemom__horizontal__regridding_1_1horiz__interp__and__extrap__tracer.t ex Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [] [3606] [3607] Underfull \vbox (badness 10000) has occurred while \output is active [] [3608] Underfull \vbox (badness 10000) has occurred while \output is active [] [3609] Underfull \vbox (badness 10000) has occurred while \output is active [] [3610] Underfull \hbox (badness 10000) in paragraph at lines 371--372 \T1/pcr/m/n/8 subroutine mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[ ]_[]and[]_[]extrap[]_[]tracer[]::horiz[]_[]interp[]_[]and[]_[]extrap[]_[] [] [3611] [3612] Underfull \vbox (badness 10000) has occurred while \output is active [] [3613] Underfull \vbox (badness 10000) has occurred while \output is active [] [3614] Underfull \vbox (badness 10000) has occurred while \output is active [] [3615] Underfull \vbox (badness 10000) has occurred while \output is active [] [3616]) (./structcoord__hycom_1_1hycom__cs.tex File: structcoord__hycom_1_1hycom__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structcoord__hycom_1_1hycom__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 179.49704pt. [3617 <./structcoord__hycom_1_1hycom__cs__coll__graph.pdf>]) (./structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type.tex File: structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type__coll__gr aph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__surface__forcing__gfdl_1_1ice__ocean__bound ary__type__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 257.81853pt. [3618 <./structmom__surface__forcing__gfdl_1_1ice__ocean__boundary__type__coll __graph.pdf>] [3619]) (./structmom__ice__shelf_1_1ice__shelf__cs.tex File: structmom__ice__shelf_1_1ice__shelf__cs__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__ice__shelf_1_1ice__shelf__cs__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 292.02348pt x 550.0pt. Underfull \vbox (badness 1028) has occurred while \output is active [] [3620] [3621 <./structmom__ice__shelf_1_1ice__shelf__cs__coll__graph.pdf>] [3622] [3623] [3624]) (./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs.tex File: structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs__coll__graph.pdf G raphic file (type pdf) Package pdftex.def Info: structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs __coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 200.10017pt. [3625] [3626 <./structmom__ice__shelf__dynamics_1_1ice__shelf__dyn__cs__coll__g raph.pdf>] [3627] [3628]) (./structmom__ice__shelf__state_1_1ice__shelf__state.tex File: structmom__ice__shelf__state_1_1ice__shelf__state__coll__graph.pdf Graphi c file (type pdf) Package pdftex.def Info: structmom__ice__shelf__state_1_1ice__shelf__state__col l__graph.pdf used on input line 17. (pdftex.def) Requested size: 204.0pt x 266.01497pt. [3629] [3630 <./structmom__ice__shelf__state_1_1ice__shelf__state__coll__graph .pdf>]) (./structideal__age__example_1_1ideal__age__tracer__cs.tex File: structideal__age__example_1_1ideal__age__tracer__cs__coll__graph.pdf Grap hic file (type pdf) Package pdftex.def Info: structideal__age__example_1_1ideal__age__tracer__cs__c oll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 391.90271pt. [3631 <./structideal__age__example_1_1ideal__age__tracer__cs__coll__graph.pdf> ]) (./structidealized__hurricane_1_1idealized__hurricane__cs.tex [3632] File: structidealized__hurricane_1_1idealized__hurricane__cs__coll__graph.pdf G raphic file (type pdf) Package pdftex.def Info: structidealized__hurricane_1_1idealized__hurricane__cs __coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 301.0pt x 287.99858pt. [3633 <./structidealized__hurricane_1_1idealized__hurricane__cs__coll__graph.p df>]) (./interfacemom__ale__sponge_1_1initialize__ale__sponge.tex [3634] [3635] [3636] Underfull \vbox (badness 10000) has occurred while \output is active [] [3637] [3638] [3639] Underfull \vbox (badness 10000) has occurred while \output is active [] [3640]) (./structmom__internal__tides_1_1int__tide__cs.tex File: structmom__internal__tides_1_1int__tide__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__internal__tides_1_1int__tide__cs__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 344.83139pt x 550.0pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [3641] [3642 <./structmom__internal__tides_1_1int__tide__cs__coll__graph.pdf>] [3643] [3644]) (./structmom__int__tide__input_1_1int__tide__input__cs.tex [3645] File: structmom__int__tide__input_1_1int__tide__input__cs__coll__graph.pdf Grap hic file (type pdf) Package pdftex.def Info: structmom__int__tide__input_1_1int__tide__input__cs__c oll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 129.19891pt. [3646 <./structmom__int__tide__input_1_1int__tide__input__cs__coll__graph.pdf> ]) (./structmom__int__tide__input_1_1int__tide__input__type.tex File: structmom__int__tide__input_1_1int__tide__input__type__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structmom__int__tide__input_1_1int__tide__input__type_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 217.0pt x 210.99896pt. [3647 <./structmom__int__tide__input_1_1int__tide__input__type__coll__graph.pd f>]) (./structregrid__interp_1_1interp__cs__type.tex File: structregrid__interp_1_1interp__cs__type__coll__graph.pdf Graphic file (t ype pdf) Package pdftex.def Info: structregrid__interp_1_1interp__cs__type__coll__graph. pdf used on input line 17. (pdftex.def) Requested size: 344.0pt x 189.00197pt. [3648 <./structregrid__interp_1_1interp__cs__type__coll__graph.pdf>]) (./interfacemom__checksums_1_1is__nan.tex [3649] [3650] [3651]) (./structisomip__tracer_1_1isomip__tracer__cs.tex File: structisomip__tracer_1_1isomip__tracer__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structisomip__tracer_1_1isomip__tracer__cs__coll__grap h.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 303.72495pt. Underfull \vbox (badness 1688) has occurred while \output is active [] [3652] [3653 <./structisomip__tracer_1_1isomip__tracer__cs__coll__graph.pdf>]) (./structmom__kappa__shear_1_1kappa__shear__cs.tex File: structmom__kappa__shear_1_1kappa__shear__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__kappa__shear_1_1kappa__shear__cs__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 210.88107pt. [3654 <./structmom__kappa__shear_1_1kappa__shear__cs__coll__graph.pdf>] [3655] ) (./structkdtree_1_1kd__root.tex File: structkdtree_1_1kd__root__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structkdtree_1_1kd__root__coll__graph.pdf used on inp ut line 17. (pdftex.def) Requested size: 171.0pt x 166.99916pt. [3656]) (./structkelvin__initialization_1_1kelvin__obc__cs.tex File: structkelvin__initialization_1_1kelvin__obc__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structkelvin__initialization_1_1kelvin__obc__cs__coll_ _graph.pdf used on input line 17. (pdftex.def) Requested size: 215.0pt x 244.00626pt. [3657 <./structkdtree_1_1kd__root__coll__graph.pdf>]) (./structmom__cvmix__kpp _1_1kpp__cs.tex [3658 <./structkelvin__initialization_1_1kelvin__obc__cs__coll_ _graph.pdf>] File: structmom__cvmix__kpp_1_1kpp__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__cvmix__kpp_1_1kpp__cs__coll__graph.pdf use d on input line 17. (pdftex.def) Requested size: 350.0pt x 462.11209pt. [3659 <./structmom__cvmix__kpp_1_1kpp__cs__coll__graph.pdf>] [3660] [3661] [36 62] [3663]) (./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diffusion__cs. tex File: structmom__lateral__boundary__diffusion_1_1lateral__boundary__diffusion__ cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__lateral__boundary__diffusion_1_1lateral__bo undary__diffusion__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 240.40347pt. [3664 <./structmom__lateral__boundary__diffusion_1_1lateral__boundary__diffusi on__cs__coll__graph.pdf>] [3665]) (./structmom__document_1_1link__msg.tex File: structmom__document_1_1link__msg__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__document_1_1link__msg__coll__graph.pdf use d on input line 17. (pdftex.def) Requested size: 315.0pt x 167.01195pt. [3666 <./structmom__document_1_1link__msg__coll__graph.pdf>]) (./structmom__file__parser_1_1link__parameter.tex File: structmom__file__parser_1_1link__parameter__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__file__parser_1_1link__parameter__coll__grap h.pdf used on input line 17. (pdftex.def) Requested size: 312.0pt x 178.0073pt. [3667 <./structmom__file__parser_1_1link__parameter__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__u__type.tex File: structmom__barotropic_1_1local__bt__cont__u__type__coll__graph.pdf Graphi c file (type pdf) Package pdftex.def Info: structmom__barotropic_1_1local__bt__cont__u__type__col l__graph.pdf used on input line 17. (pdftex.def) Requested size: 206.0pt x 288.0074pt. [3668 <./structmom__barotropic_1_1local__bt__cont__u__type__coll__graph.pdf>]) (./structmom__barotropic_1_1local__bt__cont__v__type.tex File: structmom__barotropic_1_1local__bt__cont__v__type__coll__graph.pdf Graphi c file (type pdf) Package pdftex.def Info: structmom__barotropic_1_1local__bt__cont__v__type__col l__graph.pdf used on input line 17. (pdftex.def) Requested size: 206.0pt x 288.0074pt. [3669] [3670 <./structmom__barotropic_1_1local__bt__cont__v__type__coll__graph .pdf>]) (./interfacemom__file__parser_1_1log__param.tex Underfull \hbox (badness 2065) in paragraph at lines 23--24 []\T1/phv/m/n/10 subroutine [] (CS, mod-u-le-name, var-name, value, desc, units , de-fault, layout[]Param, [] [3671] [3672] [3673] [3674] [3675] [3676] [3677] Underfull \vbox (badness 10000) has occurred while \output is active [] [3678] [3679] [3680]) (./interfacemom__file__parser_1_1log__version.tex [3681] [3682]) (./structmom__ice__shelf__dynamics_1_1loop__bounds__type.tex File: structmom__ice__shelf__dynamics_1_1loop__bounds__type__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structmom__ice__shelf__dynamics_1_1loop__bounds__type_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 223.0pt x 211.00542pt. [3683]) (./structmom__internal__tides_1_1loop__bounds__type.tex File: structmom__internal__tides_1_1loop__bounds__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__internal__tides_1_1loop__bounds__type__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 194.0pt x 211.00865pt. [3684 <./structmom__ice__shelf__dynamics_1_1loop__bounds__type__coll__graph.pd f>]) (./structmom__continuity__ppm_1_1loop__bounds__type.tex [3685 <./structmom__int ernal__tides_1_1loop__bounds__type__coll__graph.pdf>] File: structmom__continuity__ppm_1_1loop__bounds__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__continuity__ppm_1_1loop__bounds__type__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 203.0pt x 211.00865pt. ) (./structmom__marine__ice_1_1marine__ice__cs.tex [3686 <./structmom__continuity __ppm_1_1loop__bounds__type__coll__graph.pdf>] File: structmom__marine__ice_1_1marine__ice__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__marine__ice_1_1marine__ice__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 346.0pt x 211.00865pt. ) (./structmom__forcing__type_1_1mech__forcing.tex [3687 <./structmom__marine__ic e_1_1marine__ice__cs__coll__graph.pdf>] File: structmom__forcing__type_1_1mech__forcing__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__forcing__type_1_1mech__forcing__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 304.0pt x 288.01181pt. [3688 <./structmom__forcing__type_1_1mech__forcing__coll__graph.pdf>] [3689]) (./structmom__meke_1_1meke__cs.tex File: structmom__meke_1_1meke__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__meke_1_1meke__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 187.07402pt. [3690 <./structmom__meke_1_1meke__cs__coll__graph.pdf>] [3691] [3692]) (./structmom__meke__types_1_1meke__type.tex [3693] File: structmom__meke__types_1_1meke__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__meke__types_1_1meke__type__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 247.0pt x 299.00311pt. [3694 <./structmom__meke__types_1_1meke__type__coll__graph.pdf>]) (./structmom__barotropic_1_1memory__size__type.tex File: structmom__barotropic_1_1memory__size__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__barotropic_1_1memory__size__type__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 224.0pt x 211.00865pt. [3695]) (./structmeso__surface__forcing_1_1meso__surface__forcing__cs.tex File: structmeso__surface__forcing_1_1meso__surface__forcing__cs__coll__graph.p df Graphic file (type pdf) Package pdftex.def Info: structmeso__surface__forcing_1_1meso__surface__forcing __cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 210.63235pt. [3696 <./structmom__barotropic_1_1memory__size__type__coll__graph.pdf>] [3697 <./structmeso__surface__forcing_1_1meso__surface__forcing__cs__coll__graph.pdf> ]) (./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs.tex File: structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs__coll__graph. pdf Graphic file (type pdf) Package pdftex.def Info: structmom__mixed__layer__restrat_1_1mixedlayer__restra t__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 230.36584pt. [3698] [3699 <./structmom__mixed__layer__restrat_1_1mixedlayer__restrat__cs__coll__gra ph.pdf>]) (./structmom_1_1mom__control__struct.tex File: structmom_1_1mom__control__struct__coll__graph.pdf Graphic file (type pdf ) Package pdftex.def Info: structmom_1_1mom__control__struct__coll__graph.pdf us ed on input line 17. (pdftex.def) Requested size: 177.78026pt x 550.0pt. [3700] Underfull \vbox (badness 10000) has occurred while \output is active [] [3701] [3702 <./structmom_1_1mom__control__struct__coll__graph.pdf>] [3703] [3704] [3705] [3706]) (./structmom_1_1mom__diag__ids.tex [3707] File: structmom_1_1mom__diag__ids__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom_1_1mom__diag__ids__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 199.0pt x 200.01126pt. ) (./structmom__domains_1_1mom__domain__type.tex [3708 <./structmom_1_1mom__diag_ _ids__coll__graph.pdf>] File: structmom__domains_1_1mom__domain__type__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__domains_1_1mom__domain__type__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 350.0pt x 218.42957pt. [3709 <./structmom__domains_1_1mom__domain__type__coll__graph.pdf>]) (./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs.tex File: structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs__coll__graph. pdf Graphic file (type pdf) Package pdftex.def Info: structmom__dynamics__split__rk2_1_1mom__dyn__split__rk 2__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 211.95625pt x 550.0pt. [3710] [3711 <./structmom__dynamics__split__rk2_1_1mom__dyn__split__rk2__cs__coll__gra ph.pdf>] [3712] [3713] [3714]) (./structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs.tex File: structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 292.70807pt x 550.0pt. [3715] [3716 <./structmom__dynamics__unsplit_1_1mom__dyn__unsplit__cs__coll__g raph.pdf>] [3717]) (./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs.tex File: structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs__coll__gr aph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit __rk2__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 282.1903pt x 550.0pt. [3718] [3719 <./structmom__dynamics__unsplit__rk2_1_1mom__dyn__unsplit__rk2__cs__coll_ _graph.pdf>] [3720]) (./structmom__generic__tracer_1_1mom__generic__tracer__cs.tex File: structmom__generic__tracer_1_1mom__generic__tracer__cs__coll__graph.pdf G raphic file (type pdf) Package pdftex.def Info: structmom__generic__tracer_1_1mom__generic__tracer__cs __coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 228.74403pt. [3721]) (./interfacemom__io_1_1mom__read__data.tex [3722 <./structmom__generic__tracer_ 1_1mom__generic__tracer__cs__coll__graph.pdf>] [3723] [3724] [3725] [3726]) (./interfacemom__io_1_1mom__read__vector.tex [3727] [3728] [3729]) (./structmom__restart_1_1mom__restart__cs.tex File: structmom__restart_1_1mom__restart__cs__coll__graph.pdf Graphic file (typ e pdf) Package pdftex.def Info: structmom__restart_1_1mom__restart__cs__coll__graph.pd f used on input line 17. (pdftex.def) Requested size: 350.0pt x 269.91624pt. Underfull \vbox (badness 2495) has occurred while \output is active [] [3730] [3731 <./structmom__restart_1_1mom__restart__cs__coll__graph.pdf>]) (./interfacemom__checksum__packages_1_1mom__state__chksum.tex [3732] [3733] Underfull \vbox (badness 10000) has occurred while \output is active [] [3734]) (./structmom__neutral__diffusion_1_1neutral__diffusion__cs.tex File: structmom__neutral__diffusion_1_1neutral__diffusion__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__neutral__diffusion_1_1neutral__diffusion__c s__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 519.11568pt. [3735] [3736 <./structmom__neutral__diffusion_1_1neutral__diffusion__cs__coll_ _graph.pdf>] [3737] [3738]) (./structmom__open__boundary_1_1obc__registry__type.tex File: structmom__open__boundary_1_1obc__registry__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__open__boundary_1_1obc__registry__type__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 345.0pt x 256.00658pt. [3739 <./structmom__open__boundary_1_1obc__registry__type__coll__graph.pdf>]) (./structmom__open__boundary_1_1obc__segment__data__type.tex File: structmom__open__boundary_1_1obc__segment__data__type__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structmom__open__boundary_1_1obc__segment__data__type_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 321.0pt x 211.00865pt. [3740 <./structmom__open__boundary_1_1obc__segment__data__type__coll__graph.pd f>]) (./structmom__open__boundary_1_1obc__segment__tracer__type.tex File: structmom__open__boundary_1_1obc__segment__tracer__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__open__boundary_1_1obc__segment__tracer__typ e__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 160.18668pt. [3741 <./structmom__open__boundary_1_1obc__segment__tracer__type__coll__graph. pdf>]) (./structmom__open__boundary_1_1obc__segment__type.tex File: structmom__open__boundary_1_1obc__segment__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__open__boundary_1_1obc__segment__type__coll_ _graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 259.50188pt. [3742] [3743 <./structmom__open__boundary_1_1obc__segment__type__coll__graph.p df>] [3744] [3745]) (./structmom__open__boundary_1_1obc__struct__type.tex File: structmom__open__boundary_1_1obc__struct__type__coll__graph.pdf Graphic f ile (type pdf) Package pdftex.def Info: structmom__open__boundary_1_1obc__struct__type__coll__ graph.pdf used on input line 17. (pdftex.def) Requested size: 208.0pt x 178.01003pt. [3746]) (./structmom__restart_1_1obsolete__restart.tex File: structmom__restart_1_1obsolete__restart__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__restart_1_1obsolete__restart__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 242.0pt x 188.99907pt. [3747 <./structmom__open__boundary_1_1obc__struct__type__coll__graph.pdf>]) (./structocean__da__types__mod_1_1ocean__control__struct.tex File: structocean__da__types__mod_1_1ocean__control__struct__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structocean__da__types__mod_1_1ocean__control__struct_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 242.0pt x 232.99884pt. [3748 <./structmom__restart_1_1obsolete__restart__coll__graph.pdf>] [3749 <./s tructocean__da__types__mod_1_1ocean__control__struct__coll__graph.pdf>]) (./structmom__grid_1_1ocean__grid__type.tex File: structmom__grid_1_1ocean__grid__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__grid_1_1ocean__grid__type__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 411.85635pt. [3750 <./structmom__grid_1_1ocean__grid__type__coll__graph.pdf>] [3751] [3752] [3753] [3754]) (./structmom__variables_1_1ocean__internal__state.tex File: structmom__variables_1_1ocean__internal__state__coll__graph.pdf Graphic f ile (type pdf) Package pdftex.def Info: structmom__variables_1_1ocean__internal__state__coll__ graph.pdf used on input line 19. (pdftex.def) Requested size: 208.0pt x 310.01749pt. [3755] [3756 <./structmom__variables_1_1ocean__internal__state__coll__graph.pd f>]) (./interfaceocean__model__mod_1_1ocean__model__data__get.tex [3757] [3758] [3759]) (./structmom__open__boundary_1_1ocean__obc__type.tex File: structmom__open__boundary_1_1ocean__obc__type__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structmom__open__boundary_1_1ocean__obc__type__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 428.52864pt. Underfull \vbox (badness 3590) has occurred while \output is active [] [3760] [3761 <./structmom__open__boundary_1_1ocean__obc__type__coll__graph.pdf>] [3762] [3763]) (./structocean__da__types__mod_1_1ocean__profile__type.tex File: structocean__da__types__mod_1_1ocean__profile__type__coll__graph.pdf Grap hic file (type pdf) Package pdftex.def Info: structocean__da__types__mod_1_1ocean__profile__type__c oll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 328.09433pt. [3764] [3765 <./structocean__da__types__mod_1_1ocean__profile__type__coll__grap h.pdf>] [3766]) (./structocean__model__mod_1_1ocean__public__type.tex File: structocean__model__mod_1_1ocean__public__type__coll__graph.pdf Graphic f ile (type pdf) Package pdftex.def Info: structocean__model__mod_1_1ocean__public__type__coll__ graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 138.63881pt. [3767 <./structocean__model__mod_1_1ocean__public__type__coll__graph.pdf>]) (./structocean__model__mod_1_1ocean__state__type.tex [3768] File: structocean__model__mod_1_1ocean__state__type__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structocean__model__mod_1_1ocean__state__type__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 303.9932pt x 550.0pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [3769] [3770 <./structocean__model__mod_1_1ocean__state__type__coll__graph.pdf>] [3771]) (./structmom__ocmip2__cfc_1_1ocmip2__cfc__cs.tex File: structmom__ocmip2__cfc_1_1ocmip2__cfc__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__ocmip2__cfc_1_1ocmip2__cfc__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 426.15552pt. [3772] [3773 <./structmom__ocmip2__cfc_1_1ocmip2__cfc__cs__coll__graph.pdf>] [ 3774]) (./structmom__oda__driver__mod_1_1oda__cs.tex File: structmom__oda__driver__mod_1_1oda__cs__coll__graph.pdf Graphic file (typ e pdf) Package pdftex.def Info: structmom__oda__driver__mod_1_1oda__cs__coll__graph.pd f used on input line 17. (pdftex.def) Requested size: 350.0pt x 530.58733pt. [3775] [3776 <./structmom__oda__driver__mod_1_1oda__cs__coll__graph.pdf>] [377 7]) (./structmom__offline__main_1_1offline__transport__cs.tex File: structmom__offline__main_1_1offline__transport__cs__coll__graph.pdf Graph ic file (type pdf) Package pdftex.def Info: structmom__offline__main_1_1offline__transport__cs__co ll__graph.pdf used on input line 17. (pdftex.def) Requested size: 231.13106pt x 550.0pt. [3778] [3779 <./structmom__offline__main_1_1offline__transport__cs__coll__grap h.pdf>] [3780] [3781] [3782] [3783]) (./structoil__tracer_1_1oil__tracer__cs.tex File: structoil__tracer_1_1oil__tracer__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structoil__tracer_1_1oil__tracer__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 431.58408pt. [3784] [3785 <./structoil__tracer_1_1oil__tracer__cs__coll__graph.pdf>] [3786]) (./structmom__opacity_1_1opacity__cs.tex File: structmom__opacity_1_1opacity__cs__coll__graph.pdf Graphic file (type pdf ) Package pdftex.def Info: structmom__opacity_1_1opacity__cs__coll__graph.pdf us ed on input line 17. (pdftex.def) Requested size: 350.0pt x 176.60016pt. [3787 <./structmom__opacity_1_1opacity__cs__coll__graph.pdf>]) (./interfacemom __coms_1_1operator_07_09_08.tex [3788] Underfull \hbox (badness 10000) detected at line 35 [][][] [] ) (./interfacemom__coms_1_1operator_07-_08.tex [3789] Underfull \hbox (badness 10000) detected at line 35 [][][] [] ) (./structmom__opacity_1_1optics__type.tex [3790] File: structmom__opacity_1_1optics__type__coll__graph.pdf Graphic file (type pd f) Package pdftex.def Info: structmom__opacity_1_1optics__type__coll__graph.pdf u sed on input line 17. (pdftex.def) Requested size: 350.0pt x 206.10323pt. [3791 <./structmom__opacity_1_1optics__type__coll__graph.pdf>]) (./structmom__ restart_1_1p0d.tex File: structmom__restart_1_1p0d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__restart_1_1p0d__coll__graph.pdf used on in put line 17. (pdftex.def) Requested size: 184.0pt x 167.00172pt. ) (./structmom__restart_1_1p1d.tex [3792 <./structmom__restart_1_1p0d__coll__grap h.pdf>] File: structmom__restart_1_1p1d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__restart_1_1p1d__coll__graph.pdf used on in put line 17. (pdftex.def) Requested size: 184.0pt x 167.00172pt. ) (./structmom__ale__sponge_1_1p2d.tex File: structmom__ale__sponge_1_1p2d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__ale__sponge_1_1p2d__coll__graph.pdf used o n input line 17. (pdftex.def) Requested size: 219.0pt x 189.00485pt. [3793 <./structmom__restart_1_1p1d__coll__graph.pdf>]) (./structmom__restart_1 _1p2d.tex [3794 <./structmom__ale__sponge_1_1p2d__coll__graph.pdf>] File: structmom__restart_1_1p2d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__restart_1_1p2d__coll__graph.pdf used on in put line 17. (pdftex.def) Requested size: 184.0pt x 167.00172pt. ) (./structmom__variables_1_1p2d.tex File: structmom__variables_1_1p2d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__variables_1_1p2d__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 196.0pt x 166.99916pt. [3795 <./structmom__restart_1_1p2d__coll__graph.pdf>]) (./structmom__sponge_1_ 1p2d.tex File: structmom__sponge_1_1p2d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__sponge_1_1p2d__coll__graph.pdf used on inp ut line 17. (pdftex.def) Requested size: 187.0pt x 167.0094pt. [3796 <./structmom__variables_1_1p2d__coll__graph.pdf>]) (./structmom__tracer__hor__diff_1_1p2d.tex File: structmom__tracer__hor__diff_1_1p2d__coll__graph.pdf Graphic file (type p df) Package pdftex.def Info: structmom__tracer__hor__diff_1_1p2d__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 222.0pt x 167.00172pt. [3797 <./structmom__sponge_1_1p2d__coll__graph.pdf>]) (./structmom__tracer__ho r__diff_1_1p2di.tex File: structmom__tracer__hor__diff_1_1p2di__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__tracer__hor__diff_1_1p2di__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 198.0pt x 178.00456pt. [3798 <./structmom__tracer__hor__diff_1_1p2d__coll__graph.pdf>]) (./structmom_ _sponge_1_1p3d.tex File: structmom__sponge_1_1p3d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__sponge_1_1p3d__coll__graph.pdf used on inp ut line 17. (pdftex.def) Requested size: 187.0pt x 167.0094pt. [3799 <./structmom__tracer__hor__diff_1_1p2di__coll__graph.pdf>]) (./structmom__restart_1_1p3d.tex File: structmom__restart_1_1p3d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__restart_1_1p3d__coll__graph.pdf used on in put line 17. (pdftex.def) Requested size: 184.0pt x 167.00172pt. [3800 <./structmom__sponge_1_1p3d__coll__graph.pdf>]) (./structmom__ale__spong e_1_1p3d.tex File: structmom__ale__sponge_1_1p3d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__ale__sponge_1_1p3d__coll__graph.pdf used o n input line 17. (pdftex.def) Requested size: 219.0pt x 189.00485pt. [3801 <./structmom__restart_1_1p3d__coll__graph.pdf>]) (./structmom__variables _1_1p3d.tex [3802 <./structmom__ale__sponge_1_1p3d__coll__graph.pdf>] File: structmom__variables_1_1p3d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__variables_1_1p3d__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 196.0pt x 166.99916pt. ) (./structmom__restart_1_1p4d.tex File: structmom__restart_1_1p4d__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__restart_1_1p4d__coll__graph.pdf used on in put line 17. (pdftex.def) Requested size: 184.0pt x 167.00172pt. [3803 <./structmom__variables_1_1p3d__coll__graph.pdf>]) (./structmom__file__parser_1_1param__file__type.tex File: structmom__file__parser_1_1param__file__type__coll__graph.pdf Graphic fil e (type pdf) Package pdftex.def Info: structmom__file__parser_1_1param__file__type__coll__gr aph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 264.77724pt. [3804 <./structmom__restart_1_1p4d__coll__graph.pdf>] [3805 <./structmom__file __parser_1_1param__file__type__coll__graph.pdf>]) (./structmom__file__parser_1_ 1parameter__block.tex File: structmom__file__parser_1_1parameter__block__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__file__parser_1_1parameter__block__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 235.0pt x 178.00185pt. [3806]) (./interfacemom__domains_1_1pass__var.tex [3807 <./structmom__file__par ser_1_1parameter__block__coll__graph.pdf>] [3808] Underfull \vbox (badness 10000) has occurred while \output is active [] [3809] Overfull \vbox (17.1185pt too high) has occurred while \output is active [] [3810]) (./interfacemom__domains_1_1pass__var__complete.tex [3811] [3812] Overfull \vbox (9.01045pt too high) has occurred while \output is active [] [3813]) (./interfacemom__domains_1_1pass__var__start.tex [3814] Underfull \hbox (badness 10000) detected at line 54 [][][] [] [3815] [3816] Underfull \hbox (badness 10000) detected at line 131 [][][] [] ) (./interfacemom__domains_1_1pass__vector.tex [3817] [3818] [3819] [3820]) (./interfacemom__domains_1_1pass__vector__complete.tex [3821] [3822] [3823] [3824]) (./interfacemom__domains_1_1pass__vector__start.tex [3825] Underfull \hbox (badness 10000) detected at line 56 [][][] [] [3826] [3827] Underfull \hbox (badness 10000) detected at line 146 [][][] [] [3828]) (./structmom__pointaccel_1_1pointaccel__cs.tex File: structmom__pointaccel_1_1pointaccel__cs__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__pointaccel_1_1pointaccel__cs__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 350.0pt x 170.98206pt. [3829 <./structmom__pointaccel_1_1pointaccel__cs__coll__graph.pdf>]) (./interfacemom__diag__mediator_1_1post__data.tex [3830] Overfull \vbox (38.17288pt too high) has occurred while \output is active [] [3831] [3832] [3833] Overfull \vbox (26.4347pt too high) has occurred while \output is active [] [3834] [3835]) (./structmom__pressureforce_1_1pressureforce__cs.tex File: structmom__pressureforce_1_1pressureforce__cs__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structmom__pressureforce_1_1pressureforce__cs__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 147.99248pt. [3836]) (./structmom__pressureforce__fv_1_1pressureforce__fv__cs.tex File: structmom__pressureforce__fv_1_1pressureforce__fv__cs__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structmom__pressureforce__fv_1_1pressureforce__fv__cs_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 122.36104pt. [3837 <./structmom__pressureforce_1_1pressureforce__cs__coll__graph.pdf>] [383 8 <./structmom__pressureforce__fv_1_1pressureforce__fv__cs__coll__graph.pdf>]) (./structmom__pressureforce__mont_1_1pressureforce__mont__cs.tex File: structmom__pressureforce__mont_1_1pressureforce__mont__cs__coll__graph.pd f Graphic file (type pdf) Package pdftex.def Info: structmom__pressureforce__mont_1_1pressureforce__mont_ _cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 138.25671pt. [3839 <./structmom__pressureforce__mont_1_1pressureforce__mont__cs__coll__grap h.pdf>]) (./structmom__random_1_1prng.tex File: structmom__random_1_1prng__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__random_1_1prng__coll__graph.pdf used on in put line 17. (pdftex.def) Requested size: 350.0pt x 117.71625pt. [3840 <./structmom__random_1_1prng__coll__graph.pdf>]) (./structpseudo__salt__ tracer_1_1pseudo__salt__tracer__cs.tex File: structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs__coll__graph.pdf G raphic file (type pdf) Package pdftex.def Info: structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs __coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 275.30441pt. [3841 <./structpseudo__salt__tracer_1_1pseudo__salt__tracer__cs__coll__graph.p df>]) (./structmom__oda__driver__mod_1_1ptr__mpp__domain.tex File: structmom__oda__driver__mod_1_1ptr__mpp__domain__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__oda__driver__mod_1_1ptr__mpp__domain__coll_ _graph.pdf used on input line 17. (pdftex.def) Requested size: 210.0pt x 178.00456pt. [3842]) (./interfacemom__checksums_1_1qchksum.tex [3843 <./structmom__oda__driver__mod_ 1_1ptr__mpp__domain__coll__graph.pdf>] [3844] Underfull \vbox (badness 10000) has occurred while \output is active [] [3845] [3846] [3847] Underfull \vbox (badness 10000) has occurred while \output is active [] [3848]) (./interfacemom__restart_1_1query__initialized.tex [3849] [3850] [3851] [3852] [3853] [3854] [3855] [3856] Overfull \vbox (1.00325pt too high) has occurred while \output is active [] [3857] [3858]) (./interfacemom__file__parser_1_1read__param.tex [3859] [3860] [3861] [3862] Overfull \vbox (16.03447pt too high) has occurred while \output is active [] [3863] [3864] [3865] [3866]) (./interfacemom__diag__manager__wrapper_1_1register__diag__field__fms.tex [3867] Underfull \hbox (badness 2626) in paragraph at lines 15--16 []\T1/phv/m/n/10 integer func-tion [] (module[]_[]name, field[]_[]name, init[]_ []time, long[]_[]name, units, [] Underfull \hbox (badness 10000) in paragraph at lines 31--32 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]array[]_[]fms [] [3868] Underfull \hbox (badness 10000) in paragraph at lines 116--117 \T1/pcr/m/n/8 integer function mom[]_[]diag[]_[]manager[]_[]wrapper[]::register []_[]diag[]_[]field[]_[]fms[]::register[]_[]diag[]_[]field[]_[]scalar[]_[]fms [] [3869] [3870]) (./interfacemom__restart_1_1register__restart__field.tex [3871] [3872] [3873] [3874] [3875] [3876] [3877] Underfull \vbox (badness 10000) has occurred while \output is active [] [3878] [3879] [3880]) (./interfacemom__restart_1_1register__restart__pair.tex [3881] [3882]) (./structmom__regridding_1_1regridding__cs.tex [3883] File: structmom__regridding_1_1regridding__cs__coll__graph.pdf Graphic file (ty pe pdf) Package pdftex.def Info: structmom__regridding_1_1regridding__cs__coll__graph.p df used on input line 17. (pdftex.def) Requested size: 350.0pt x 392.72627pt. [3884 <./structmom__regridding_1_1regridding__cs__coll__graph.pdf>] [3885]) (./structmom__regularize__layers_1_1regularize__layers__cs.tex File: structmom__regularize__layers_1_1regularize__layers__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__regularize__layers_1_1regularize__layers__c s__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 164.23419pt. [3886 <./structmom__regularize__layers_1_1regularize__layers__cs__coll__graph. pdf>]) (./structmom__remapping_1_1remapping__cs.tex [3887] File: structmom__remapping_1_1remapping__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__remapping_1_1remapping__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 346.0pt x 211.00865pt. [3888 <./structmom__remapping_1_1remapping__cs__coll__graph.pdf>]) (./interfacemom__coms_1_1reproducing__sum.tex [3889] Underfull \hbox (badness 10000) detected at line 60 [][][] [] [3890] Underfull \vbox (badness 10000) has occurred while \output is active [] [3891] Underfull \hbox (badness 10000) detected at line 200 [][][] [] [3892] Underfull \vbox (badness 10000) has occurred while \output is active [] [3893] Underfull \vbox (badness 10000) has occurred while \output is active [] [3894]) (./interfacemom__coms_1_1reproducing__sum__efp.tex [3895] Underfull \hbox (badness 10000) detected at line 54 [][][] [] [3896] Underfull \vbox (badness 10000) has occurred while \output is active [] [3897]) (./structrgc__tracer_1_1rgc__tracer__cs.tex File: structrgc__tracer_1_1rgc__tracer__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structrgc__tracer_1_1rgc__tracer__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 112.95042pt. [3898 <./structrgc__tracer_1_1rgc__tracer__cs__coll__graph.pdf>]) (./structcoo rd__rho_1_1rho__cs.tex File: structcoord__rho_1_1rho__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structcoord__rho_1_1rho__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 135.55678pt. [3899]) (./interfacemom__array__transform_1_1rotate__array.tex [3900 <./structcoord__rh o_1_1rho__cs__coll__graph.pdf>] [3901] [3902] Underfull \vbox (badness 10000) has occurred while \output is active [] [3903]) (./interfacemom__array__transform_1_1rotate__array__pair.tex [3904] [3905] [3906]) (./interfacemom__array__transform_1_1rotate__vector.tex [3907] [3908] Overfull \vbox (29.91698pt too high) has occurred while \output is active [] [3909]) (./interfacemom__transform__fms_1_1rotated__mpp__chksum.tex) (./interfacemom__transform__fms_1_1rotated__time__interp__external.tex [3910] Overfull \vbox (46.10497pt too high) has occurred while \output is active [] [3911]) (./interfacemom__transform__fms_1_1rotated__write__field.tex) (./interfacemom__safe__alloc_1_1safe__alloc__alloc.tex [3912] Overfull \vbox (22.88931pt too high) has occurred while \output is active [] [3913] [3914]) (./interfacemom__safe__alloc_1_1safe__alloc__ptr.tex [3915] [3916] [3917] [3918] Overfull \vbox (27.44069pt too high) has occurred while \output is active [] [3919]) (./structscm__cvmix__tests_1_1scm__cvmix__tests__cs.tex File: structscm__cvmix__tests_1_1scm__cvmix__tests__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structscm__cvmix__tests_1_1scm__cvmix__tests__cs__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 249.0pt x 233.00954pt. [3920 <./structscm__cvmix__tests_1_1scm__cvmix__tests__cs__coll__graph.pdf>]) (./structmom__open__boundary_1_1segment__tracer__registry__type.tex File: structmom__open__boundary_1_1segment__tracer__registry__type__coll__graph .pdf Graphic file (type pdf) Package pdftex.def Info: structmom__open__boundary_1_1segment__tracer__registry __type__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 220.13458pt. [3921]) (./structmom__set__diffusivity_1_1set__diffusivity__cs.tex File: structmom__set__diffusivity_1_1set__diffusivity__cs__coll__graph.pdf Grap hic file (type pdf) Package pdftex.def Info: structmom__set__diffusivity_1_1set__diffusivity__cs__c oll__graph.pdf used on input line 17. (pdftex.def) Requested size: 290.49864pt x 550.0pt. [3922 <./structmom__open__boundary_1_1segment__tracer__registry__type__coll__g raph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [] [3923] [3924 <./structmom__set__diffusivity_1_1set__diffusivity__cs__coll__graph.pdf>] [3925] [3926] [3927]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__field.tex [3928] [3929] [3930]) (./interfacemom__ale__sponge_1_1set__up__ale__sponge__vel__field.tex Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 31--32 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[] [] [3931] Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isdb[]: g %iedb, g %jsd[]: g %jed, g %ke), intent(in), target \T1/pcr/m/sl/8 u[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 99--100 | \T1/pcr/m/n/8 real, dimension( g %isd[]: g %ied, g %jsdb[]: g %jedb, g %ke), intent(in), target \T1/pcr/m/sl/8 v[]_[]ptr [] [3932] [3933]) (./structmom__set__visc_1_1set__visc__cs.tex File: structmom__set__visc_1_1set__visc__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__set__visc_1_1set__visc__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 161.93837pt. [3934] LaTeX Font Info: Font shape `T1/pcr/m/it' in size <9> not available (Font) Font shape `T1/pcr/m/sl' tried instead on input line 25. [3935 <./structmom__set__visc_1_1set__visc__cs__coll__graph.pdf>] [3936]) (./structshelfwave__initialization_1_1shelfwave__obc__cs.tex File: structshelfwave__initialization_1_1shelfwave__obc__cs__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structshelfwave__initialization_1_1shelfwave__obc__cs_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 212.0pt x 255.01436pt. [3937]) (./structcoord__sigma_1_1sigma__cs.tex [3938 <./structshelfwave__initialization _1_1shelfwave__obc__cs__coll__graph.pdf>] File: structcoord__sigma_1_1sigma__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structcoord__sigma_1_1sigma__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 250.0pt x 178.01003pt. ) (./structcoord__slight_1_1slight__cs.tex File: structcoord__slight_1_1slight__cs__coll__graph.pdf Graphic file (type pdf ) Package pdftex.def Info: structcoord__slight_1_1slight__cs__coll__graph.pdf us ed on input line 17. (pdftex.def) Requested size: 350.0pt x 180.97449pt. [3939 <./structcoord__sigma_1_1sigma__cs__coll__graph.pdf>] [3940 <./structcoo rd__slight_1_1slight__cs__coll__graph.pdf>]) (./structmom__sponge_1_1sponge__cs .tex File: structmom__sponge_1_1sponge__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__sponge_1_1sponge__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 221.59483pt. [3941 <./structmom__sponge_1_1sponge__cs__coll__graph.pdf>] [3942]) (./interfaceregrid__consts_1_1state__dependent.tex [3943]) (./structmom__checksum__packages_1_1stats.tex File: structmom__checksum__packages_1_1stats__coll__graph.pdf Graphic file (typ e pdf) Package pdftex.def Info: structmom__checksum__packages_1_1stats__coll__graph.pd f used on input line 17. (pdftex.def) Requested size: 228.0pt x 200.0082pt. [3944]) (./structmom__sum__output_1_1sum__output__cs.tex File: structmom__sum__output_1_1sum__output__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__sum__output_1_1sum__output__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 357.38362pt. [3945 <./structmom__checksum__packages_1_1stats__coll__graph.pdf>] [3946 <./st ructmom__sum__output_1_1sum__output__cs__coll__graph.pdf>] [3947]) (./structmom __variables_1_1surface.tex File: structmom__variables_1_1surface__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__variables_1_1surface__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 259.23944pt. [3948] [3949 <./structmom__variables_1_1surface__coll__graph.pdf>]) (./structmom__diagnostics_1_1surface__diag__ids.tex File: structmom__diagnostics_1_1surface__diag__ids__coll__graph.pdf Graphic fil e (type pdf) Package pdftex.def Info: structmom__diagnostics_1_1surface__diag__ids__coll__gr aph.pdf used on input line 17. (pdftex.def) Requested size: 225.0pt x 288.01622pt. [3950] [3951 <./structmom__diagnostics_1_1surface__diag__ids__coll__graph.pdf> ]) (./structmom__surface__forcing_1_1surface__forcing__cs.tex File: structmom__surface__forcing_1_1surface__forcing__cs__coll__graph.pdf Grap hic file (type pdf) Package pdftex.def Info: structmom__surface__forcing_1_1surface__forcing__cs__c oll__graph.pdf used on input line 17. (pdftex.def) Requested size: 219.65167pt x 550.0pt. [3952] [3953 <./structmom__surface__forcing_1_1surface__forcing__cs__coll__gra ph.pdf>] [3954] [3955] [3956] [3957]) (./structmom__surface__forcing__gfdl_1_1surface__forcing__cs.tex File: structmom__surface__forcing__gfdl_1_1surface__forcing__cs__coll__graph.pd f Graphic file (type pdf) Package pdftex.def Info: structmom__surface__forcing__gfdl_1_1surface__forcing_ _cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 518.53326pt. [3958] [3959 <./structmom__surface__forcing__gfdl_1_1surface__forcing__cs__coll__graph .pdf>] [3960] [3961]) (./structmom__variables_1_1thermo__var__ptrs.tex File: structmom__variables_1_1thermo__var__ptrs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__variables_1_1thermo__var__ptrs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 265.27312pt. [3962] [3963 <./structmom__variables_1_1thermo__var__ptrs__coll__graph.pdf>]) (./structmom__thickness__diffuse_1_1thickness__diffuse__cs.tex File: structmom__thickness__diffuse_1_1thickness__diffuse__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__thickness__diffuse_1_1thickness__diffuse__c s__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 211.50699pt. [3964] [3965 <./structmom__thickness__diffuse_1_1thickness__diffuse__cs__coll_ _graph.pdf>] [3966]) (./structtidal__bay__initialization_1_1tidal__bay__obc__cs.tex File: structtidal__bay__initialization_1_1tidal__bay__obc__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structtidal__bay__initialization_1_1tidal__bay__obc__c s__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 208.0pt x 178.01003pt. [3967]) (./structmom__tidal__forcing_1_1tidal__forcing__cs.tex File: structmom__tidal__forcing_1_1tidal__forcing__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__tidal__forcing_1_1tidal__forcing__cs__coll_ _graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 212.0599pt. [3968 <./structtidal__bay__initialization_1_1tidal__bay__obc__cs__coll__graph. pdf>] [3969 <./structmom__tidal__forcing_1_1tidal__forcing__cs__coll__graph.pdf >]) (./structmom__tidal__mixing_1_1tidal__mixing__cs.tex File: structmom__tidal__mixing_1_1tidal__mixing__cs__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structmom__tidal__mixing_1_1tidal__mixing__cs__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 393.43687pt. [3970] [3971 <./structmom__tidal__mixing_1_1tidal__mixing__cs__coll__graph.pdf >] [3972] [3973]) (./structmom__tidal__mixing_1_1tidal__mixing__diags.tex [3974] File: structmom__tidal__mixing_1_1tidal__mixing__diags__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__tidal__mixing_1_1tidal__mixing__diags__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 243.0pt x 299.00311pt. [3975 <./structmom__tidal__mixing_1_1tidal__mixing__diags__coll__graph.pdf>]) (./structmom__tracer__advect_1_1tracer__advect__cs.tex File: structmom__tracer__advect_1_1tracer__advect__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__tracer__advect_1_1tracer__advect__cs__coll_ _graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 169.90619pt. [3976]) (./structmom__tracer__flow__control_1_1tracer__flow__control__cs.tex File: structmom__tracer__flow__control_1_1tracer__flow__control__cs__coll__grap h.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__tracer__flow__control_1_1tracer__flow__cont rol__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 340.65784pt x 550.0pt. [3977 <./structmom__tracer__advect_1_1tracer__advect__cs__coll__graph.pdf>] Underfull \vbox (badness 10000) has occurred while \output is active [] [3978] [3979 <./structmom__tracer__flow__control_1_1tracer__flow__control__cs__coll__g raph.pdf>] [3980]) (./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs.tex File: structmom__tracer__hor__diff_1_1tracer__hor__diff__cs__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structmom__tracer__hor__diff_1_1tracer__hor__diff__cs_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 392.2261pt. Underfull \vbox (badness 1237) has occurred while \output is active [] [3981] [3982 <./structmom__tracer__hor__diff_1_1tracer__hor__diff__cs__coll__graph.pdf >] [3983]) (./structmom__tracer__registry_1_1tracer__registry__type.tex File: structmom__tracer__registry_1_1tracer__registry__type__coll__graph.pdf Gr aphic file (type pdf) Package pdftex.def Info: structmom__tracer__registry_1_1tracer__registry__type_ _coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 153.78795pt. ) (./structmom__tracer__registry_1_1tracer__type.tex [3984 <./structmom__tracer__ registry_1_1tracer__registry__type__coll__graph.pdf>] File: structmom__tracer__registry_1_1tracer__type__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__tracer__registry_1_1tracer__type__coll__gra ph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 500.54901pt. Underfull \vbox (badness 10000) has occurred while \output is active [] [3985] [3986 <./structmom__tracer__registry_1_1tracer__type__coll__graph.pdf>] [3987] [3988]) (./structmom__diagnostics_1_1transport__diag__ids.tex [3989] File: structmom__diagnostics_1_1transport__diag__ids__coll__graph.pdf Graphic f ile (type pdf) Package pdftex.def Info: structmom__diagnostics_1_1transport__diag__ids__coll__ graph.pdf used on input line 17. (pdftex.def) Requested size: 233.0pt x 266.01497pt. [3990 <./structmom__diagnostics_1_1transport__diag__ids__coll__graph.pdf>]) (./interfacemom__checksums_1_1uchksum.tex [3991] [3992] Underfull \vbox (badness 10000) has occurred while \output is active [] [3993] [3994] [3995] Underfull \vbox (badness 10000) has occurred while \output is active [] [3996]) (./structmom__unit__scaling_1_1unit__scale__type.tex File: structmom__unit__scaling_1_1unit__scale__type__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structmom__unit__scaling_1_1unit__scale__type__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 231.0pt x 288.0074pt. [3997] [3998 <./structmom__unit__scaling_1_1unit__scale__type__coll__graph.pdf >]) (./structmom__boundary__update_1_1update__obc__cs.tex [3999] File: structmom__boundary__update_1_1update__obc__cs__coll__graph.pdf Graphic f ile (type pdf) Package pdftex.def Info: structmom__boundary__update_1_1update__obc__cs__coll__ graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 269.3964pt. [4000 <./structmom__boundary__update_1_1update__obc__cs__coll__graph.pdf>]) (./structuser__change__diffusivity_1_1user__change__diff__cs.tex File: structuser__change__diffusivity_1_1user__change__diff__cs__coll__graph.pd f Graphic file (type pdf) Package pdftex.def Info: structuser__change__diffusivity_1_1user__change__diff_ _cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 287.0pt x 200.0082pt. [4001 <./structuser__change__diffusivity_1_1user__change__diff__cs__coll__grap h.pdf>]) (./structuser__shelf__init_1_1user__ice__shelf__cs.tex File: structuser__shelf__init_1_1user__ice__shelf__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structuser__shelf__init_1_1user__ice__shelf__cs__coll_ _graph.pdf used on input line 17. (pdftex.def) Requested size: 258.0pt x 244.02495pt. [4002]) (./structuser__revise__forcing_1_1user__revise__forcing__cs.tex [4003 <./struct user__shelf__init_1_1user__ice__shelf__cs__coll__graph.pdf>] File: structuser__revise__forcing_1_1user__revise__forcing__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structuser__revise__forcing_1_1user__revise__forcing__ cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 214.0pt x 178.00185pt. ) (./structuser__surface__forcing_1_1user__surface__forcing__cs.tex File: structuser__surface__forcing_1_1user__surface__forcing__cs__coll__graph.p df Graphic file (type pdf) Package pdftex.def Info: structuser__surface__forcing_1_1user__surface__forcing __cs__coll__graph.pdf used on input line 19. (pdftex.def) Requested size: 317.0pt x 210.99896pt. [4004 <./structuser__revise__forcing_1_1user__revise__forcing__cs__coll__graph .pdf>] [4005 <./structuser__surface__forcing_1_1user__surface__forcing__cs__coll__grap h.pdf>]) (./structuser__tracer__example_1_1user__tracer__example__cs.tex File: structuser__tracer__example_1_1user__tracer__example__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structuser__tracer__example_1_1user__tracer__example__ cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 290.90529pt. [4006 <./structuser__tracer__example_1_1user__tracer__example__cs__coll__graph. pdf>]) (./interfacemom__checksums_1_1uvchksum.tex [4007] Overfull \vbox (17.3705pt too high) has occurred while \output is active [] [4008] [4009] [4010] [4011]) (./structmom__io_1_1vardesc.tex File: structmom__io_1_1vardesc__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__io_1_1vardesc__coll__graph.pdf used on inp ut line 17. (pdftex.def) Requested size: 350.0pt x 105.00012pt. [4012 <./structmom__io_1_1vardesc__coll__graph.pdf>]) (./structmom__lateral__mixing__coeffs_1_1varmix__cs.tex File: structmom__lateral__mixing__coeffs_1_1varmix__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__lateral__mixing__coeffs_1_1varmix__cs__coll __graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 157.02425pt. [4013 <./structmom__lateral__mixing__coeffs_1_1varmix__cs__coll__graph.pdf>] [ 4014] [4015] [4016]) (./interfacemom__checksums_1_1vchksum.tex [4017] [4018] Underfull \vbox (badness 10000) has occurred while \output is active [] [4019] Overfull \vbox (14.08534pt too high) has occurred while \output is active [] [4020] [4021] Underfull \vbox (badness 10000) has occurred while \output is active [] [4022]) (./interfacemom__debugging_1_1vec__chksum.tex [4023] Overfull \vbox (18.60503pt too high) has occurred while \output is active [] [4024]) (./interfacemom__debugging_1_1vec__chksum__a.tex [4025] [4026]) (./interfacemom__debugging_1_1vec__chksum__b.tex [4027] [4028] [4029]) (./interfacemom__debugging_1_1vec__chksum__c.tex [4030] Overfull \vbox (18.60503pt too high) has occurred while \output is active [] [4031]) (./structmom__verticalgrid_1_1verticalgrid__type.tex File: structmom__verticalgrid_1_1verticalgrid__type__coll__graph.pdf Graphic fi le (type pdf) Package pdftex.def Info: structmom__verticalgrid_1_1verticalgrid__type__coll__g raph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 204.97755pt. [4032 <./structmom__verticalgrid_1_1verticalgrid__type__coll__graph.pdf>] [403 3]) (./structmom__vert__friction_1_1vertvisc__cs.tex File: structmom__vert__friction_1_1vertvisc__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__vert__friction_1_1vertvisc__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 530.11069pt. [4034] [4035 <./structmom__vert__friction_1_1vertvisc__cs__coll__graph.pdf>] [ 4036] [4037]) (./structmom__variables_1_1vertvisc__type.tex File: structmom__variables_1_1vertvisc__type__coll__graph.pdf Graphic file (typ e pdf) Package pdftex.def Info: structmom__variables_1_1vertvisc__type__coll__graph.pd f used on input line 17. (pdftex.def) Requested size: 248.0pt x 288.0074pt. [4038] [4039 <./structmom__variables_1_1vertvisc__type__coll__graph.pdf>]) (./structmom__wave__interface_1_1wave__parameters__cs.tex File: structmom__wave__interface_1_1wave__parameters__cs__coll__graph.pdf Graph ic file (type pdf) Package pdftex.def Info: structmom__wave__interface_1_1wave__parameters__cs__co ll__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 183.61227pt. [4040] [4041 <./structmom__wave__interface_1_1wave__parameters__cs__coll__grap h.pdf>]) (./structmom__wave__speed_1_1wave__speed__cs.tex [4042] File: structmom__wave__speed_1_1wave__speed__cs__coll__graph.pdf Graphic file ( type pdf) Package pdftex.def Info: structmom__wave__speed_1_1wave__speed__cs__coll__graph .pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 143.40211pt. [4043 <./structmom__wave__speed_1_1wave__speed__cs__coll__graph.pdf>]) (./structmom__wave__structure_1_1wave__structure__cs.tex File: structmom__wave__structure_1_1wave__structure__cs__coll__graph.pdf Graphi c file (type pdf) Package pdftex.def Info: structmom__wave__structure_1_1wave__structure__cs__col l__graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 273.88039pt. [4044 <./structmom__wave__structure_1_1wave__structure__cs__coll__graph.pdf>]) (./structmom__write__cputime_1_1write__cputime__cs.tex File: structmom__write__cputime_1_1write__cputime__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structmom__write__cputime_1_1write__cputime__cs__coll_ _graph.pdf used on input line 17. (pdftex.def) Requested size: 350.0pt x 163.58781pt. [4045]) (./structcoord__zlike_1_1zlike__cs.tex [4046 <./structmom__write__cputime_1_1wr ite__cputime__cs__coll__graph.pdf>] File: structcoord__zlike_1_1zlike__cs__coll__graph.pdf Graphic file (type pdf) Package pdftex.def Info: structcoord__zlike_1_1zlike__cs__coll__graph.pdf used on input line 17. (pdftex.def) Requested size: 250.0pt x 178.01003pt. ) [4047 <./structcoord__zlike_1_1zlike__cs__coll__graph.pdf>] [4048 ] Chapter 49. (./MOM__memory_8h.tex Underfull \hbox (badness 8189) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/config[]_[]src/dynamic[] _[]symmetric/[]M[]O[]M[]_[]memory.h File [] File: MOM__memory_8h__incl.pdf Graphic file (type pdf) Package pdftex.def Info: MOM__memory_8h__incl.pdf used on input line 14. (pdftex.def) Requested size: 256.0pt x 178.01274pt. [4049 <./MOM__memory_8h__incl.pdf>]) (./MOM__memory__macros_8h.tex Underfull \hbox (badness 10000) in paragraph at lines 1--1 []\T1/phv/bc/n/14.4 /home/cermak/src/[]M[]O[]M6.devrob/src/framework/[]M[]O[]M[ ]_[]memory[]_[]macros.h File Ref-er- [] File: MOM__memory__macros_8h__dep__incl.pdf Graphic file (type pdf) Package pdftex.def Info: MOM__memory__macros_8h__dep__incl.pdf used on input l ine 13. (pdftex.def) Requested size: 350.0pt x 6.72739pt. [4050] [4051 <./MOM__memory__macros_8h__dep__incl.pdf>] [4052] [4053] [4054]) [4055] (./refman.bbl (./refman.brf) \tf@brf=\write6 \openout6 = `refman.brf'. [4056 ] [4057] [4058]) [4059] [4060 ] (./refman.ind Underfull \hbox (badness 10000) in paragraph at lines 3--5 []\T1/phv/m/n/10 /home/cermak/src/[]M[]O[]M6.[]devrob/config[]_[]src/dynamic[]_ [] [] Underfull \hbox (badness 10000) in paragraph at lines 5--7 []\T1/phv/m/n/10 /home/cermak/src/[]M[]O[]M6.[]devrob/src/framework/[]M[]O[]M[] _[] [] [4061 ] [4062] Underfull \hbox (badness 10000) in paragraph at lines 325--327 []\T1/phv/m/n/10 boundary[]_[]impulse[]_[]tracer[]::boundary[]_[]impulse[]_[]tr acer[]_[]cs, [] [4063] [4064] Underfull \hbox (badness 10000) in paragraph at lines 506--508 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]derivs[] _[]linear, [] Underfull \hbox (badness 10000) in paragraph at lines 510--512 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]nemo[]::calculate[]_[]density[]_[]derivs[]_[ ]nemo, [] Underfull \hbox (badness 10000) in paragraph at lines 514--516 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[] _[]teos10, [] Underfull \hbox (badness 10000) in paragraph at lines 518--520 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]derivs[] _[]wright, [] Underfull \hbox (badness 10000) in paragraph at lines 526--528 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]derivs[] _[]linear, [] Underfull \hbox (badness 10000) in paragraph at lines 530--532 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]nemo[]::calculate[]_[]density[]_[]derivs[]_[ ]nemo, [] Underfull \hbox (badness 10000) in paragraph at lines 534--536 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[] _[]teos10, [] Underfull \hbox (badness 10000) in paragraph at lines 538--540 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]derivs[] _[]wright, [] Underfull \hbox (badness 10000) in paragraph at lines 571--573 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[] _[] [] Underfull \hbox (badness 10000) in paragraph at lines 575--577 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[] _[] [] Underfull \hbox (badness 10000) in paragraph at lines 579--581 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[] _[] [] Underfull \hbox (badness 10000) in paragraph at lines 587--589 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[] _[] [] Underfull \hbox (badness 10000) in paragraph at lines 591--593 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[] _[] [] [4065] Underfull \hbox (badness 10000) in paragraph at lines 595--597 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[] _[] [] Underfull \hbox (badness 10000) in paragraph at lines 621--623 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]unesco[]::calculate[]_[]spec[]_[]vol[]_[]une sco, [] Underfull \hbox (badness 10000) in paragraph at lines 641--643 []| \T1/phv/m/n/10 mom[]_[]eos[]_[]unesco[]::calculate[]_[]spec[]_[]vol[]_[]une sco, [] [4066] [4067] [4068] [4069] [4070] [4071] [4072] Underfull \hbox (badness 10000) in paragraph at lines 1426--1428 []\T1/phv/m/n/10 dumbbell[]_[]surface[]_[]forcing[]::dumbbell[]_[]surface[]_[]f orcing[]_[]cs, [] [4073] [4074] [4075] [4076] [4077] Underfull \hbox (badness 10000) in paragraph at lines 2093--2095 []| \T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]an d[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 2097--2099 []| \T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]an d[]_[] [] [4078] [4079] [4080] [4081] [4082] [4083] [4084] [4085] [4086] [4087] Underfull \hbox (badness 10000) in paragraph at lines 3240--3242 []\T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_[] field[]_[]fms, [] [4088] [4089] Underfull \hbox (badness 10000) in paragraph at lines 3575--3577 []\T1/phv/m/n/10 mom[]_[]dynamics[]_[]unsplit[]_[]rk2[]::mom[]_[]dyn[]_[]unspli t[]_[]rk2[]_[]cs, [] [4090] Underfull \hbox (badness 10000) in paragraph at lines 3714--3716 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]l inear, [] Underfull \hbox (badness 10000) in paragraph at lines 3737--3739 []\T1/phv/m/n/10 mom[]_[]eos[]_[]linear[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 3741--3743 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]l inear, [] Underfull \hbox (badness 10000) in paragraph at lines 3781--3783 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]te os10, [] Underfull \hbox (badness 10000) in paragraph at lines 3783--3785 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]t eos10, [] Underfull \hbox (badness 10000) in paragraph at lines 3791--3793 []\T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]derivs[]_[ ]teos10, [] Underfull \hbox (badness 10000) in paragraph at lines 3797--3799 []\T1/phv/m/n/10 mom[]_[]eos[]_[]teos10[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 3799--3801 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]te os10, [] Underfull \hbox (badness 10000) in paragraph at lines 3801--3803 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]t eos10, [] [4091] Underfull \hbox (badness 10000) in paragraph at lines 3849--3851 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]wr ight, [] Underfull \hbox (badness 10000) in paragraph at lines 3851--3853 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]w right, [] Underfull \hbox (badness 10000) in paragraph at lines 3868--3870 []\T1/phv/m/n/10 mom[]_[]eos[]_[]wright[]::calculate[]_[]density[]_[]second[]_[ ]derivs[]_[] [] Underfull \hbox (badness 10000) in paragraph at lines 3870--3872 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]array[]_[]wr ight, [] Underfull \hbox (badness 10000) in paragraph at lines 3872--3874 []| \T1/phv/m/n/10 calculate[]_[]density[]_[]second[]_[]derivs[]_[]scalar[]_[]w right, [] [4092] [4093] Underfull \hbox (badness 10000) in paragraph at lines 4161--4163 []\T1/phv/m/n/10 mom[]_[]horizontal[]_[]regridding[]::horiz[]_[]interp[]_[]and[ ]_[]extrap[]_[] [] [4094] [4095] Underfull \hbox (badness 10000) in paragraph at lines 4361--4363 []\T1/phv/m/n/10 mom[]_[]lateral[]_[]boundary[]_[]diffusion[]::lateral[]_[]boun dary[]_[] [] [4096] [4097] Underfull \hbox (badness 10000) in paragraph at lines 4633--4635 []\T1/phv/m/n/10 mom[]_[]open[]_[]boundary[]::segment[]_[]tracer[]_[]registry[] _[]type, [] [4098] [4099] Underfull \hbox (badness 10000) in paragraph at lines 5002--5004 []| \T1/phv/m/n/10 mom[]_[]checksum[]_[]packages[]::mom[]_[]state[]_[]chksum, [] Underfull \hbox (badness 10000) in paragraph at lines 5006--5008 []| \T1/phv/m/n/10 mom[]_[]checksum[]_[]packages[]::mom[]_[]state[]_[]chksum, [] [4100] Underfull \hbox (badness 10000) in paragraph at lines 5110--5112 []\T1/phv/m/n/10 mom[]_[]surface[]_[]forcing[]_[]gfdl[]::ice[]_[]ocean[]_[]boun dary[]_[]type, [] [4101] [4102] [4103] [4104] [4105] [4106] [4107] [4108] Underfull \hbox (badness 10000) in paragraph at lines 6142--6144 []| \T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_ []field[] [] [4109] Underfull \hbox (badness 10000) in paragraph at lines 6151--6153 []| \T1/phv/m/n/10 mom[]_[]diag[]_[]manager[]_[]wrapper[]::register[]_[]diag[]_ []field[] [] [4110] [4111] Underfull \hbox (badness 10000) in paragraph at lines 6497--6499 []| \T1/phv/m/n/10 mom[]_[]transform[]_[]fms[]::rotated[]_[]time[]_[]interp[]_[ ]external, [] [4112] [4113] Underfull \hbox (badness 10000) in paragraph at lines 6726--6728 []| \T1/phv/m/n/10 mom[]_[]ale[]_[]sponge[]::set[]_[]up[]_[]ale[]_[]sponge[]_[] vel[]_[]field, [] Underfull \hbox (badness 10000) in paragraph at lines 6730--6732 []| \T1/phv/m/n/10 mom[]_[]ale[]_[]sponge[]::set[]_[]up[]_[]ale[]_[]sponge[]_[] vel[]_[]field, [] [4114] [4115] [4116] [4117] [4118] [4119]) Package atveryend Info: Empty hook `BeforeClearDocument' on input line 837. Package atveryend Info: Empty hook `AfterLastShipout' on input line 837. (./refman.aux) Package atveryend Info: Executing hook `AtVeryEndDocument' on input line 837. Package atveryend Info: Executing hook `AtEndAfterFileList' on input line 837. Package rerunfilecheck Info: File `refman.out' has not changed. (rerunfilecheck) Checksum: 86070524C45FD419D35238F9BA8D1A9A;976277. Package rerunfilecheck Info: File `refman.brf' has not changed. (rerunfilecheck) Checksum: B35C0B673AB612DA1E8E625899AA30DD;2834. LaTeX Warning: There were undefined references. LaTeX Warning: There were multiply-defined labels. Package atveryend Info: Empty hook `AtVeryVeryEnd' on input line 837. ) Here is how much of TeX's memory you used: 51093 strings out of 483183 1704979 string characters out of 5966291 1294505 words of memory out of 5000000 45998 multiletter control sequences out of 15000+600000 608750 words of font info for 124 fonts, out of 8000000 for 9000 14 hyphenation exceptions out of 8191 55i,18n,96p,3026b,3860s stack positions out of 5000i,500n,10000p,200000b,80000s pdfTeX warning (dest): name{MESO__surface__forcing_8F90_source} has been refe renced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__diabatic__aux_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__tidal__mixing_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__kappa__shear_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__barotropic_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM_8F90_source} has been referenced but does not e xist, replaced by a fixed one pdfTeX warning (dest): name{MOM__variables_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{MOM__surface__forcing_8F90_source} has been referen ced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{write__ocean__obs_8F90_source} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__types_8F90_source} has been referenced b ut does not exist, replaced by a fixed one pdfTeX warning (dest): name{ocean__da__core_8F90_source} has been referenced bu t does not exist, replaced by a fixed one pdfTeX warning (dest): name{kdtree_8f90_source} has been referenced but does no t exist, replaced by a fixed one {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}< /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb> Output written on refman.pdf (4193 pages, 15120784 bytes). PDF statistics: 69407 PDF objects out of 79402 (max. 8388607) 63609 compressed objects within 637 object streams 18674 named destinations out of 22161 (max. 500000) 31639 words of extra memory for PDF output out of 35830 (max. 10000000)